RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP85L (Homo sapiens)

Ensembl gene IDs: ENSG00000111860

Ensembl transcript IDs: ENST00000360290.7, ENST00000368488.9, ENST00000368491.8, ENST00000392500.7, ENST00000419517.2, ENST00000434604.5, ENST00000462101.1, ENST00000472713.1, ENST00000476150.5, ENST00000483035.5, ENST00000489276.1

Found 425 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTTCTCAGAAGCTCTGCTCTGACCCTAGAAACCCTTATAAATTTGTaGATAAAGCACGTGCACACACACACAACAACACACATACATGCA +
Preference number: 1 (lower is better)
Translates to: FLRSSALTLETLINL*IKHVHTHTTTHIHA
Trigger: TGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAATTTATAAGGGTTTCTAGGGTCAGAGCAGAGCTTCTGAGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CCA 90 bp GGAATATATTGGTGTCATAACTTCCACGAACATCCTAGTTCAAACTaGGTGAGATGCTCTAGTGTTGCTATTTGCCCATCTTATTTGGTC +
Preference number: 1 (lower is better)
Translates to: GIYWCHNFHEHPSSN*VRCSSVAICPSYLV
Trigger: GACCAAATAAGATGGGCAAATAGCAACACTAGAGCATCTCACCCAGTTTGAACTAGGATGTTCGTGGAAGTTATGACACCAATATATTCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR TCA 90 bp TATATTGGTGTCATAACTTCCACGAACATCCTAGTTCAAACTGGGTaGGATGCTCTAGTGTTGCTATTTGCCCATCTTATTTGGTCTAAC +
Preference number: 1 (lower is better)
Translates to: YIGVITSTNILVQTG*DALVLLFAHLIWSN
Trigger: GTTAGACCAAATAAGATGGGCAAATAGCAACACTAGAGCATCTCACCCAGTTTGAACTAGGATGTTCGTGGAAGTTATGACACCAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR GCA 90 bp GAAAGAAATATAAGAATAAACAGCGTGTGCCTTTCTCAGAAGCTCTaGTCTGACCCTAGAAACCCTTATAAATTTGTGAATAAAGCACGT +
Preference number: 1 (lower is better)
Translates to: ERNIRINSVCLSQKL*SDPRNPYKFVNKAR
Trigger: ACGTGCTTTATTCACAAATTTATAAGGGTTTCTAGGGTCAGAGCAGAGCTTCTGAGAAAGGCACACGCTGTTTATTCTTATATTTCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CCA 90 bp GTTAGAAAGATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTaGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAA +
Preference number: 1 (lower is better)
Translates to: VRKIYKSISILKENP*ISADSRGLLKSYYK
Trigger: TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATCTTTCTAAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
3UTR CAA 90 bp TGCCTCCTGTACTACCATGACAACACTTGCCTGCTGTTTGAACTCTaGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAAGCTTC +
Preference number: 2 (lower is better)
Translates to: CLLYYHDNTCLLFEL*FSQPLKIPKYNTSF
Trigger: GAAGCTTGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTAGTACAGGAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGCACTTGCCTGCTGTTTaGACTCTTGTTCAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWHLPAV*TLVQPA
Trigger: GGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTG...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACCTCCTGTACTACCATaGCAACACTTGCCTGCTGTT +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLPPVLP*QHLPAV
Trigger: AACAGCAGGCAAGTGTTGTCATGGTAGTACAGGAGG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACACTTGCCTGCTGTTTaGACTCTTGTTCAGCCAGCC +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLHLPAV*TLVQPA
Trigger: GGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCATCCTACTCCTTCATGTaGAGGGTACTCTTCACAGCT +
Preference number: 2 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSSYSFM*RVLFTA
Trigger: AGCTGTGAAGAGTACCCTTCACATGAAGGAGTAGGA...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACAATATTATCCTGCTTaGGTCACACCCTCTACCCCT +
Preference number: 2 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSQYYPA*VTPSTP
Trigger: AGGGGTAGAGGGTGTGACTCAAGCAGGATAATATTG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACTTTCTCAGAAGCTCTaGTCTGACCCTAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSLSQKL*SDPRNP
Trigger: AGGGTTTCTAGGGTCAGAGCAGAGCTTCTGAGAAAG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACAATATTATCCTGCTTaGGTCACACCCTCTACCCCT +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLQYYPA*VTPSTP
Trigger: AGGGGTAGAGGGTGTGACTCAAGCAGGATAATATTG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAATGCTTGCTGTAATGTaGTTGAGGCTGAATAAGCTC +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLMLAVM*LRLNKL
Trigger: GAGCTTATTCAGCCTCAATCACATTACAGCAAGCAT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACGCAAGTCATGTCACTTaGAACCTTCCATTATGGCTC +
Preference number: 2 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHASHVT*NLPLWL
Trigger: GAGCCATAATGGAAGGTTGCAAGTGACATGACTTGC...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATCAAACTGGGTGAGATaGTCTAGTGTTGCTATTTGC +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLSNWVR*SSVAIC
Trigger: GCAAATAGCAACACTAGAGCATCTCACCCAGTTTGA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAAATCATATGGCAATATaGCACCCATGGCATTTTGGG +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLNHMAI*HPWHFG
Trigger: CCCAAAATGCCATGGGTGGCATATTGCCATATGATT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAACTGTGTATCTTCCTaGGTAGTCTCCTTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLNCVSS*VVSLKA
Trigger: GGCCTTCAAGGAGACTACCCAGGAAGATACACAGTT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CAA 90 bp CTACCCCTCCATCTCTTATTTAGTCTTGACCTAAATGAGACTTGGTaGCATCACAAGATCAAACCAACTTACAAAGGACAAGGCTTTCGC +
Preference number: 2 (lower is better)
Translates to: LPLHLLFSLDLNETW*HHKIKPTYKGQGFR
Trigger: GCGAAAGCCTTGTCCTTTGTAAGTTGGTTTGATCTTGTGATGCAACCAAGTCTCATTTAGGTCAAGACTAAATAAGAGATGGAGGGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTCTGGAAAAACAGCTaGCCTATCTACAGTACTAAA +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLWKNS*PIYSTK
Trigger: TTTAGTACTGTAGATAGGTCAGCTGTTTTTCCAGAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAGTGCCTTTGATTCAGTaGATTTTATCTGTACAGGCA +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLVPLIQ*ILSVQA
Trigger: TGCCTGTACAGATAAAATTCACTGAATCAAAGGCAC...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACATGGCAGTTTCAAATaGTATAGTCTGAGTGAGCAT +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLHGSFK*YSLSEH
Trigger: ATGCTCACTCAGACTATATCATTTGAAACTGCCATG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTACCATGACAACACTTaGCTGCTGTTTGAACTCTTG +
Preference number: 2 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWYHDNT*LLFELL
Trigger: CAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTACAATGTACTTACTaGTTTCTTAGTGCCCAGATT +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLQCTY*FLSAQI
Trigger: AATCTGGGCACTAAGAAATCAGTAAGTACATTGTAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCCAAGTTCTTACCAGTaGCTAAGACCCTCCTTAGGT +
Preference number: 2 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIPSSYQ*LRPSLG
Trigger: ACCTAAGGAGGGTCTTAGTCACTGGTAAGAACTTGG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAACAGATTTTGGAAACTaGAATGCATCAGCAGTAGTT +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLTDFGN*NASAVV
Trigger: AACTACTGCTGATGCATTTCAGTTTCCAAAATCTGT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTTTCTCAGAAGCTCTaGTCTGACCCTAGAAACCCT +
Preference number: 2 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILSQKL*SDPRNP
Trigger: AGGGTTTCTAGGGTCAGAGCAGAGCTTCTGAGAAAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATCAAACTGGGTGAGATaGTCTAGTGTTGCTATTTGC +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLSNWVR*SSVAIC
Trigger: GCAAATAGCAACACTAGAGCATCTCACCCAGTTTGA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTGTTACTTTATGCTTaGTGTAATGTGATTGAGGCT +
Preference number: 2 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLLLYA*CNVIEA
Trigger: AGCCTCAATCACATTACAGCAAGCATAAAGTAACAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATGCTGCACTTGTGGCTaGTCTATTTTAGACGTTATT +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLCCTCG*SILDVI
Trigger: AATAACGTCTAAAATAGATCAGCCACAAGTGCAGCA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCGCAAGTCATGTCACTTaGAACCTTCCATTATGGCTC +
Preference number: 2 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIASHVT*NLPLWL
Trigger: GAGCCATAATGGAAGGTTGCAAGTGACATGACTTGC...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAGACCTAAATGAGACTTaGTTGCATCACAAGATCAAA +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLDLNET*LHHKIK
Trigger: TTTGATCTTGTGATGCAACCAAGTCTCATTTAGGTC...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAAATATAAATGGTTTTaGCTCCTGTACTACCATGAC +
Preference number: 2 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLKYKWF*LLYYHD
Trigger: GTCATGGTAGTACAGGAGGCAAAACCATTTATATTT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CAA 90 bp TGTTTTACCATAAAGGACCAAGGCAGAATTCTTCGCATCACATTTTaGGTGGAAATTTACTATACCCTGATTATCGTCAAGCTACTAATG +
Preference number: 2 (lower is better)
Translates to: CFTIKDQGRILRITF*VEIYYTLIIVKLLM
Trigger: CATTAGTAGCTTGACGATAATCAGGGTATAGTAAATTTCCACCAAAAATGTGATGCGAAGAATTCTGCCTTGGTCCTTTATGGTAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCACCCTTATAAATTTGTaGATAAAGCACGTGCACACA +
Preference number: 2 (lower is better)
Translates to: IYCLCRPLYKLQILRGSITLINL*IKHVHT
Trigger: TGTGTGCACGTGCTTTATTCACAAATTTATAAGGGT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTATTTGCTGCACTTGTaGCTGATCTATTTTAGACGT +
Preference number: 2 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIYLLHL*LIYFRR
Trigger: ACGTCTAAAATAGATCAGCCACAAGTGCAGCAAATA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CAA 90 bp TTTGATTCAGTGAATTTTATCTGTACAGGCAATTTGGGTCTTTCATaGAGTCAACTGTTACTTTATGCTTGCTGTAATGTGATTGAGGCT +
Preference number: 2 (lower is better)
Translates to: FDSVNFICTGNLGLS*SQLLLYACCNVIEA
Trigger: AGCCTCAATCACATTACAGCAAGCATAAAGTAACAGTTGACTCAATGAAAGACCCAAATTGCCTGTACAGATAAAATTCACTGAATCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CAA 90 bp AGCTATTGTGCCTTTGATTCAGTGAATTTTATCTGTACAGGCAATTaGGGTCTTTCATTGAGTCAACTGTTACTTTATGCTTGCTGTAAT +
Preference number: 2 (lower is better)
Translates to: SYCAFDSVNFICTGN*GLSLSQLLLYACCN
Trigger: ATTACAGCAAGCATAAAGTAACAGTTGACTCAATGAAAGACCCAAATTGCCTGTACAGATAAAATTCACTGAATCAAAGGCACAATAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTGCTGTTTGAACTCTaGTTCAGCCAGCCACTGAAA +
Preference number: 3 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLLFEL*FSQPLK
Trigger: TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATCAATATTATCCTGCTaGAGTCACACCCTCTACCCC +
Preference number: 3 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLSILSC*SHTLYP
Trigger: GGGGTAGAGGGTGTGACTCAAGCAGGATAATATTGA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAACACTTGCCTGCTGTTaGAACTCTTGTTCAGCCAGC +
Preference number: 3 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLTLACC*NSCSAS
Trigger: GCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CCA 72 bp TGGTGTCATAACTTCCACGAACATCCTAGTTCAAACTaGGTGAGATGCTCTAGTGTTGCTATTTGCCCATCT +
Preference number: 3 (lower is better)
Translates to: WCHNFHEHPSSN*VRCSSVAICPS
Trigger: AGATGGGCAAATAGCAACACTAGAGCATCTCACCCAGTTTGAACTAGGATGTTCGTGGAAGTTATGACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTGCAAGTCATGTCACTaGCAACCTTCCATTATGGCT +
Preference number: 3 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHCKSCH*QPSIMA
Trigger: AGCCATAATGGAAGGTTGCAAGTGACATGACTTGCA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAGGTACTCTTCACAGCTaGGTCCTACAATCAGTAGTT +
Preference number: 3 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSGTLHS*VLQSVV
Trigger: AACTACTGATTGTAGGACCAAGCTGTGAAGAGTACC...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR GCA 72 bp AACTTCCACGAACATCCTAGTTCAAACTGGGTGAGATaGTCTAGTGTTGCTATTTGCCCATCTTATTTGGTC +
Preference number: 3 (lower is better)
Translates to: NFHEHPSSNWVR*SSVAICPSYLV
Trigger: GACCAAATAAGATGGGCAAATAGCAACACTAGAGCATCTCACCCAGTTTGAACTAGGATGTTCGTGGAAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR TCA 72 bp GTCATAACTTCCACGAACATCCTAGTTCAAACTGGGTaGGATGCTCTAGTGTTGCTATTTGCCCATCTTATT +
Preference number: 3 (lower is better)
Translates to: VITSTNILVQTG*DALVLLFAHLI
Trigger: AATAAGATGGGCAAATAGCAACACTAGAGCATCTCACCCAGTTTGAACTAGGATGTTCGTGGAAGTTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CCA 72 bp AGCTGTATAGCCAACATTTTAAACTGTGTATCTTCCTaGGTAGTCTCCTTGAAGGCCTTGTCTCACATTTTC +
Preference number: 3 (lower is better)
Translates to: SCIANILNCVSS*VVSLKALSHIF
Trigger: GAAAATGTGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTGGCTATACAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTCAATATTATCCTGCTaGAGTCACACCCTCTACCCC +
Preference number: 3 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISILSC*SHTLYP
Trigger: GGGGTAGAGGGTGTGACTCAAGCAGGATAATATTGA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTAAGCAAACAAGTGTaGGATTCACAAAAAGCACAA +
Preference number: 3 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLSKQV*DSQKAQ
Trigger: TTGTGCTTTTTGTGAATCCAACACTTGTTTGCTTAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCGGTACTCTTCACAGCTaGGTCCTACAATCAGTAGTT +
Preference number: 3 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIGTLHS*VLQSVV
Trigger: AACTACTGATTGTAGGACCAAGCTGTGAAGAGTACC...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAAAATTTCACACCTCTaGGGAAATCCACAATCACTC +
Preference number: 3 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLKISHL*GNPQSL
Trigger: GAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR GCA 72 bp GCATGTGATATGCTCTTTATCAAATCAATATTATCCTaGTTGAGTCACACCCTCTACCCCTCCATCTCTTAT +
Preference number: 3 (lower is better)
Translates to: ACDMLFIKSILS*LSHTLYPSISY
Trigger: ATAAGAGATGGAGGGGTAGAGGGTGTGACTCAAGCAGGATAATATTGATTTGATAAAGAGCATATCACATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATGGATAAGTAAGCTATaGTTCCAGGGTAACTTTGTT +
Preference number: 3 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLWISKL*FQGNFV
Trigger: AACAAAGTTACCCTGGAACAATAGCTTACTTATCCA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CCA 72 bp CTCCATCTCTTATTTAGTCTTGACCTAAATGAGACTTaGTTGCATCACAAGATCAAACCAACTTACAAAGGA +
Preference number: 3 (lower is better)
Translates to: LHLLFSLDLNET*LHHKIKPTYKG
Trigger: TCCTTTGTAAGTTGGTTTGATCTTGTGATGCAACCAAGTCTCATTTAGGTCAAGACTAAATAAGAGATGGAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR TCA 72 bp ACAGAAACATGGACAACACTCATTTGGAAGTTTAAATaGCTGTACGTCTACTGCAAAATCAACTGCATTTCA +
Preference number: 3 (lower is better)
Translates to: TETWTTLIWKFK*LYVYCKINCIS
Trigger: TGAAATGCAGTTGATTTTGCAGTAGACGTACAGTCATTTAAACTTCCAAATGAGTGTTGTCCATGTTTCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR TCA 72 bp TCAAGTGAAAAGATAGCTATTGTGCCTTTGATTCAGTaGATTTTATCTGTACAGGCAATTTGGGTCTTTCAT +
Preference number: 3 (lower is better)
Translates to: SSEKIAIVPLIQ*ILSVQAIWVFH
Trigger: ATGAAAGACCCAAATTGCCTGTACAGATAAAATTCACTGAATCAAAGGCACAATAGCTATCTTTTCACTTGA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGGCGGCGACTCGGCGGTaGCGGCTGCTAGATCCCCGG +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWAATRR*RLLDPR
Trigger: CCGGGGATCTAGCAGCCGTCACCGCCGAGTCGCCGC...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR GCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCGCACTGCCGGCGCCTaGCATGGCCAAGCCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNRTAGA*HGQAGW
Trigger: CCAGCCGGCTTGGCCATGGCAGGCGCCGGCAGTGCG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR CCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAAACTTGCGCGGAGCGTaGGCCTCGGCGACACGGGCA +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKNLRGA*ASATRA
Trigger: TGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAGGCTATCCCGGCCGCTaGCCTCCGGAGCCAGGAAGC +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSGYPGR*PPEPGS
Trigger: GCTTCCTGGCTCCGGAGGCCAGCGGCCGGGATAGCC...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR GCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACCCAGATTCGCCGCACTaGCGGCGCCTGCCATGGCCA +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHPDSPH*RRLPWP
Trigger: TGGCCATGGCAGGCGCCGGCAGTGCGGCGAATCTGG...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR CCA 90 bp AAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGTCTGGGCCAGCACTGTaGTGGGAGGCGGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: KSISILKENPWISADSRGSGPAL*WEAGSA
Trigger: TGCAGAGCCCGCCTCCCACCACAGTGCTGGCCCAGA...CCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360290.7
CDS-3UTR GCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTGGCTGGTTAACGGCTaGTCAGCTACGGGCGGGGAG +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWWLVNG*SATGGE
Trigger: CTCCCCGCCCGTAGCTGAGCAGCCGTTAACCAGCCA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTCGGCGGCGGAAACTTaGGCGGAGCGTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISAAET*AERGPR
Trigger: CCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR CCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGGAGGAAAGGCGGGATaGCTGGTTAACGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKGGKAG*LVNGCS
Trigger: TGAGCAGCCGTTAACCAGCCATCCCGCCTTTCCTCC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGTCCTTACGGAAGGCTaGATGGGAACTCCACCTACT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKVLTEG*MGTPPT
Trigger: AGTAGGTGGAGTTCCCATTCAGCCTTCCGTAAGGAC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGGGGCCAGCACTGTGGTaGGAGGCGGGCTCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQGPALW*EAGSAV
Trigger: TACTGCAGAGCCCGCCTCCCACCACAGTGCTGGCCC...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360290.7
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCATACAGTGCCACCCTaGCCACAGTTATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNHTVPP*PQLSGA
Trigger: TGCCCCGGATAACTGTGGCCAGGGTGGCACTGTATG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGCATACAGTGCCACCCTaGCCACAGTTATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKHTVPP*PQLSGA
Trigger: TGCCCCGGATAACTGTGGCCAGGGTGGCACTGTATG...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGGTGGGAGGCGGGCTCTaGAGTAGGCCCATCACTCAG +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQVGGGL*SRPITQ
Trigger: CTGAGTGATGGGCCTACTGCAGAGCCCGCCTCCCAC...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360290.7
CDS-3UTR GCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACATCCTTGACTCTTCTCTaGATACAGTGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTSLTLL*IQCHPG
Trigger: GCCAGGGTGGCACTGTATGCAGAGAAGAGTCAAGGA...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAACATACAGTGCCACCCTaGCCACAGTTATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: RKSLDFCRQQRASQKLLQHTVPP*PQLSGA
Trigger: TGCCCCGGATAACTGTGGCCAGGGTGGCACTGTATG...TTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACATACAGTGCCACCCTaGCCACAGTTATCCGGGGCA +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLHTVPP*PQLSGA
Trigger: TGCCCCGGATAACTGTGGCCAGGGTGGCACTGTATG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACGAAAGGCGGGATGGCTaGTTAACGGCTGCTCAGCTA +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHERRDG*LTAAQL
Trigger: TAGCTGAGCAGCCGTTAACCAGCCATCCCGCCTTTC...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR TCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACCACTTGCCTGCTGTTTaGACTCTTGTTCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHHLPAV*TLVQPA
Trigger: GGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTG...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACAATATTATCCTGCTTaGGTCACACCCTCTACCCCT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKQYYPA*VTPSTP
Trigger: AGGGGTAGAGGGTGTGACTCAAGCAGGATAATATTG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACCAAGTTCTTACCAGTaGCTAAGACCCTCCTTAGGT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKPSSYQ*LRPSLG
Trigger: ACCTAAGGAGGGTCTTAGTCACTGGTAAGAACTTGG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTTCCTTGACTCTTCTCTaGATACAGTGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASSLTLL*IQCHPG
Trigger: GCCAGGGTGGCACTGTATGCAGAGAAGAGTCAAGGA...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTCCTTGACTCTTCTCTaGATACAGTGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHSLTLL*IQCHPG
Trigger: GCCAGGGTGGCACTGTATGCAGAGAAGAGTCAAGGA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTCACGTCCGTCCTCCTaGTTCTTCGGCGGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISRPSS*FFGGGN
Trigger: GTTTCCGCCGCCGAAGAAGCAGGAGGACGGACGTGA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS-3UTR CCA 90 bp GCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTTACGGAAGGCTGAATaGGAACTCCACCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: AFLSSKKILGFLQTAEGFLRKAE*ELHLLP
Trigger: AGGCAGTAGGTGGAGTTCCCATTCAGCCTTCCGTAA...GAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAAACTGTGTATCTTCCTaGGTAGTCTCCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKNCVSS*VVSLKA
Trigger: GGCCTTCAAGGAGACTACCCAGGAAGATACACAGTT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACACTACACAGGGAAGGCTaGGCTCCAAAGACATCTATC +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTLHREG*APKTSI
Trigger: GATAGATGTCTTTGGAGCCCAGCCTTCCCTGTGTAG...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp ATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTGGAGATCTGTCAGGCTaGGGTCTTCAGGAATGCTTC +
Preference number: 4 (lower is better)
Translates to: ILKENPWISADSRGLLKSGDLSG*GLQECF
Trigger: GAAGCATTCCTGAAGACCCCAGCCTGACAGATCTCC...ACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000392500.7
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACCTAAGTTTGGAAATTaGAGCGCTGGAATTAGACGG +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKPKFGN*SAGIRR
Trigger: CCGTCTAATTCCAGCGCTTCAATTTCCAAACTTAGG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACTCCAAACCATTCCTTaGCTCTTCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKLQTIP*LFSAYS
Trigger: ACTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAAGGTTCAAAAGCCTCTaGGCTTGTCATAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKRFKSL*ACHNGL
Trigger: AAGCCCATTATGACAAGCTCAGAGGCTTTTGAACCT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACGTCCTTACGGAAGGCTaGATGGGAACTCCACCTACT +
Preference number: 4 (lower is better)
Translates to: KENPWISADSRGLLKSYYVLTEG*MGTPPT
Trigger: AGTAGGTGGAGTTCCCATTCAGCCTTCCGTAAGGAC...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACATCCTACTCCTTCATGTaGAGGGTACTCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTSYSFM*RVLFTA
Trigger: AGCTGTGAAGAGTACCCTTCACATGAAGGAGTAGGA...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACTAGTTCAAACTGGGTaGGATGCTCTAGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKLVQTG*DALVLL
Trigger: TAGCAACACTAGAGCATCTCACCCAGTTTGAACTAG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGCTTCTCTGCATACAGTaGCACCCTGGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKLLCIQ*HPGHSY
Trigger: ATAACTGTGGCCAGGGTGGCACTGTATGCAGAGAAG...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATTGGAAAGAACTGTCTaGTGCCTAGATTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKLERTV*CLDWSG
Trigger: ACCTGACCAATCTAGGCAGCAGACAGTTCTTTCCAA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGCAAGTCATGTCACTTaGAACCTTCCATTATGGCTC +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKASHVT*NLPLWL
Trigger: GAGCCATAATGGAAGGTTGCAAGTGACATGACTTGC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCATTACGGAAGGCTGAATaGGAACTCCACCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSLRKAE*ELHLLP
Trigger: AGGCAGTAGGTGGAGTTCCCATTCAGCCTTCCGTAA...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTTACGGAAGGCTGAATaGGAACTCCACCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHLRKAE*ELHLLP
Trigger: AGGCAGTAGGTGGAGTTCCCATTCAGCCTTCCGTAA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGCTACACAGGGAAGGCTaGGCTCCAAAGACATCTATC +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWLHREG*APKTSI
Trigger: GATAGATGTCTTTGGAGCCCAGCCTTCCCTGTGTAG...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACAGTTATCCGGGGCAGTaGGTTTGGATAAAGATGACC +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHSYPGQ*VWIKMT
Trigger: GGTCATCTTTATCCAAACTCACTGCCCCGGATAACT...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGAGTTATCCGGGGCAGTaGGTTTGGATAAAGATGACC +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWSYPGQ*VWIKMT
Trigger: GGTCATCTTTATCCAAACTCACTGCCCCGGATAACT...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACACTCCAAACCATTCCTTaGCTCTTCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTLQTIP*LFSAYS
Trigger: ACTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAG...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTAACACTTGATCACTaGGTAATGCAGTTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLTLDH*VMQLSP
Trigger: GGGAGACAACTGCATTACTCAGTGATCAAGTGTTAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTCCTACTCCTTCATGTaGAGGGTACTCTTCACAGCT +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWSYSFM*RVLFTA
Trigger: AGCTGTGAAGAGTACCCTTCACATGAAGGAGTAGGA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACCTCCTGTACTACCATaGCAACACTTGCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLPPVLP*QHLPAV
Trigger: AACAGCAGGCAAGTGTTGTCATGGTAGTACAGGAGG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCAATATTATCCTGCTTaGGTCACACCCTCTACCCCT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNQYYPA*VTPSTP
Trigger: AGGGGTAGAGGGTGTGACTCAAGCAGGATAATATTG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCCAAGTTCTTACCAGTaGCTAAGACCCTCCTTAGGT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNPSSYQ*LRPSLG
Trigger: ACCTAAGGAGGGTCTTAGTCACTGGTAAGAACTTGG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAGGGTGGTTCAAAAACTaGACCCAGCTTACAAAACCA +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTGWFKN*TQLTKP
Trigger: TGGTTTTGTAAGCTGGGTTCAGTTTTTGAACCACCC...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAGGGTGGTTCAAAAACTaGACCCAGCTTACAAAACCA +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLGWFKN*TQLTKP
Trigger: TGGTTTTGTAAGCTGGGTTCAGTTTTTGAACCACCC...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAGGAACAGTTGTGGCCTaGCACAATGATTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTGTVVA*HNDSLA
Trigger: TGCTAATGAATCATTGTGGCAGGCCACAACTGTTCC...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACTTCTCTGCATACAGTaGCACCCTGGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLLLCIQ*HPGHSY
Trigger: ATAACTGTGGCCAGGGTGGCACTGTATGCAGAGAAG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACGAAAGTCTTCAATTTaGTGCTGTTGCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLRKSSI*CCCQGA
Trigger: AGCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACATTGGAAAGAACTGTCTaGTGCCTAGATTGGTCAGGT +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTLERTV*CLDWSG
Trigger: ACCTGACCAATCTAGGCAGCAGACAGTTCTTTCCAA...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCTTTCTCAGAAGCTCTaGTCTGACCCTAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLSQKL*SDPRNP
Trigger: AGGGTTTCTAGGGTCAGAGCAGAGCTTCTGAGAAAG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAATGGGGTCTTCAGGAATaGTTCACGAAGGAGGGACTA +
Preference number: 4 (lower is better)
Translates to: ENPWISADSRGLLKSYYKWGLQE*FTKEGL
Trigger: TAGTCCCTCCTTCGTGAAGCATTCCTGAAGACCCCA...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000392500.7
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAATTTCGATGGTTAGATaGAACAGTTGTGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLISMVR*NSCGLP
Trigger: TGGCAGGCCACAACTGTTCCATCTAACCATCGAAAT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp ACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGTTACGGAAGGCTGAATaGGAACTCCACCTACTGCCT +
Preference number: 4 (lower is better)
Translates to: TRAFLSSKKILGFLQTAELRKAE*ELHLLP
Trigger: AGGCAGTAGGTGGAGTTCCCATTCAGCCTTCCGTAA...CTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAAGTCAAAACCTGCATTaGTGTTTCACTTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKSQNLH*CFTSLS
Trigger: CGACAAGGAAGTGAAACACCAATGCAGGTTTTGACT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAAACTGTGTATCTTCCTaGGTAGTCTCCTTGAAGGCC +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSNCVSS*VVSLKA
Trigger: GGCCTTCAAGGAGACTACCCAGGAAGATACACAGTT...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGATGGGGGAGGGTGGTTaGGATTCTATTCAAAGAGAG +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWMGEGG*DSIQRE
Trigger: CTCTCTTTGAATAGAATCCCAACCACCCTCCCCCAT...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CAA 72 bp TACTACCATGACAACACTTGCCTGCTGTTTGAACTCTaGTTCAGCCAGCCACTGAAAATCCCAAAGTACAAC +
Preference number: 4 (lower is better)
Translates to: YYHDNTCLLFEL*FSQPLKIPKYN
Trigger: GTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGCCTAAGTTTGGAAATTaGAGCGCTGGAATTAGACGG +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKPKFGN*SAGIRR
Trigger: CCGTCTAATTCCAGCGCTTCAATTTCCAAACTTAGG...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCAGTTATCCGGGGCAGTaGGTTTGGATAAAGATGACC +
Preference number: 4 (lower is better)
Translates to: FLQTAEGFSKVTTKLITSSYPGQ*VWIKMT
Trigger: GGTCATCTTTATCCAAACTCACTGCCCCGGATAACT...GGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp ACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGAGTTATCCGGGGCAGTaGGTTTGGATAAAGATGACC +
Preference number: 4 (lower is better)
Translates to: TRAFLSSKKILGFLQTAESYPGQ*VWIKMT
Trigger: GGTCATCTTTATCCAAACTCACTGCCCCGGATAACT...CTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAACTCCAAACCATTCCTTaGCTCTTCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: SILKENPWISADSRGLLKLQTIP*LFSAYS
Trigger: ACTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAG...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCTCCAAACCATTCCTTaGCTCTTCTCTGCATACAGT +
Preference number: 4 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASLQTIP*LFSAYS
Trigger: ACTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAG...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGAGGTTCAAAAGCCTCTaGGCTTGTCATAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKRFKSL*ACHNGL
Trigger: AAGCCCATTATGACAAGCTCAGAGGCTTTTGAACCT...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGGTTCAAAAGCCTCTaGGCTTGTCATAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: SILKENPWISADSRGLLKRFKSL*ACHNGL
Trigger: AAGCCCATTATGACAAGCTCAGAGGCTTTTGAACCT...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCGTCCTTACGGAAGGCTaGATGGGAACTCCACCTACT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIVLTEG*MGTPPT
Trigger: AGTAGGTGGAGTTCCCATTCAGCCTTCCGTAAGGAC...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGGTCCTTACGGAAGGCTaGATGGGAACTCCACCTACT +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQVLTEG*MGTPPT
Trigger: AGTAGGTGGAGTTCCCATTCAGCCTTCCGTAAGGAC...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAATTGATTCCCACTTACTaGAATCCTGATAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SILKENPWISADSRGLLKLIPTY*NPDSQV
Trigger: CACCTGGCTATCAGGATTTCAGTAAGTGGGAATCAA...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTTGATTCCCACTTACTaGAATCCTGATAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHLIPTY*NPDSQV
Trigger: CACCTGGCTATCAGGATTTCAGTAAGTGGGAATCAA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTTGATTCCCACTTACTaGAATCCTGATAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLIPTY*NPDSQV
Trigger: CACCTGGCTATCAGGATTTCAGTAAGTGGGAATCAA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACCTAACATGGCATGTTaGGCCCGTAATTCATTATCC +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSPNMAC*ARNSLS
Trigger: GGATAATGAATTACGGGCTCAACATGCCATGTTAGG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACATGTGGGACTAACACTTaGTCACTGAGTAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTCGTNT*SLSNAV
Trigger: AACTGCATTACTCAGTGATCAAGTGTTAGTCCCACA...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACTAGTTCAAACTGGGTaGGATGCTCTAGTGTTGCTA +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSLVQTG*DALVLL
Trigger: TAGCAACACTAGAGCATCTCACCCAGTTTGAACTAG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGTGCCTTTGATTCAGTaGATTTTATCTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKVPLIQ*ILSVQA
Trigger: TGCCTGTACAGATAAAATTCACTGAATCAAAGGCAC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATTTTCTGAGCTCAAGTaGAAAGATAGCTATTGTGCC +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKFSELK*KDSYCA
Trigger: GGCACAATAGCTATCTTTTCACTTGAGCTCAGAAAA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAACCAGTCATAGTGACTaGTTATACACTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSTSHSD*LYTVLC
Trigger: GCACAGCACAGTGTATAATCAGTCACTATGACTGGT...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCTTCTCTGCATACAGTaGCACCCTGGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: ISADSRGLLKSYYKINHLLLCIQ*HPGHSY
Trigger: ATAACTGTGGCCAGGGTGGCACTGTATGCAGAGAAG...GAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGTCCTTGACTCTTCTCTaGATACAGTGCCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQSLTLL*IQCHPG
Trigger: GCCAGGGTGGCACTGTATGCAGAGAAGAGTCAAGGA...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp AGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCGAAAGTCTTCAATTTaGTGCTGTTGCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SISILKENPWISADSRGLRKSSI*CCCQGA
Trigger: AGCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCG...AAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGCGAAAGTCTTCAATTTaGTGCTGTTGCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKRKSSI*CCCQGA
Trigger: AGCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCG...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAGATCCAGTCAAAACCTaGATTGGTGTTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLDPVKT*IGVSLP
Trigger: AGGAAGTGAAACACCAATGCAGGTTTTGACTGGATC...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACTTTCTCAGAAGCTCTaGTCTGACCCTAGAAACCCT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLLSQKL*SDPRNP
Trigger: AGGGTTTCTAGGGTCAGAGCAGAGCTTCTGAGAAAG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTTAAGGACTCTGGGATaGAGGAGCACTACAATGTAC +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWLRTLG*RSTTMY
Trigger: GTACATTGTAGTGCTCCTGCATCCCAGAGTCCTTAA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCATTAGACGGCATCACATaGGCAGTAGGAAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSLDGIT*AVGRVI
Trigger: GATTACTCTTCCTACTGCCCATGTGATGCCGTCTAA...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTTAGACGGCATCACATaGGCAGTAGGAAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLDGIT*AVGRVI
Trigger: GATTACTCTTCCTACTGCCCATGTGATGCCGTCTAA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCAGTCAAAACCTGCATTaGTGTTTCACTTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: RAFLSSKKILGFLQTAEGSQNLH*CFTSLS
Trigger: CGACAAGGAAGTGAAACACCAATGCAGGTTTTGACT...GCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTCCCCTTGTTGGGAATaGGAAACTGATTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKSPCWE*ETDSSE
Trigger: TTCAGAGGAATCAGTTTCCCATTCCCAACAAGGGGA...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTCCCCTTGTTGGGAATaGGAAACTGATTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNSPCWE*ETDSSE
Trigger: TTCAGAGGAATCAGTTTCCCATTCCCAACAAGGGGA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCATCCCCTTGTTGGGAATaGGAAACTGATTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSSPCWE*ETDSSE
Trigger: TTCAGAGGAATCAGTTTCCCATTCCCAACAAGGGGA...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTTCCCCTTGTTGGGAATaGGAAACTGATTCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASSPCWE*ETDSSE
Trigger: TTCAGAGGAATCAGTTTCCCATTCCCAACAAGGGGA...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACGCTATGCCCTTTATCTaGCAAGAAAACAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNAMPFI*QENRHV
Trigger: CACATGCCTGTTTTCTTGCCAGATAAAGGGCATAGC...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAGCTATGCCCTTTATCTaGCAAGAAAACAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSAMPFI*QENRHV
Trigger: CACATGCCTGTTTTCTTGCCAGATAAAGGGCATAGC...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTCACTGGCAATATGGTaGTGCTTCCAACGTTTAGTT +
Preference number: 4 (lower is better)
Translates to: ILKENPWISADSRGLLKSSLAIW*CFQRLV
Trigger: AACTAAACGTTGGAAGCATCACCATATTGCCAGTGA...ACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360290.7
CDS-3UTR TCA 90 bp ATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTCCACTTGAAGTTGAATaGTCTTCCACGCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: ILKENPWISADSRGLLKSPLEVE*SSTLSE
Trigger: TTCTGATAGCGTGGAAGATCATTCAACTTCAAGTGG...ACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCCACTTGAAGTTGAATaGTCTTCCACGCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNPLEVE*SSTLSE
Trigger: TTCTGATAGCGTGGAAGATCATTCAACTTCAAGTGG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAACCTAAGTTTGGAAATTaGAGCGCTGGAATTAGACGG +
Preference number: 4 (lower is better)
Translates to: ENPWISADSRGLLKSYYKPKFGN*SAGIRR
Trigger: CCGTCTAATTCCAGCGCTTCAATTTCCAAACTTAGG...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTTTCCCAATGTTTGCATaGGGCTTGTACTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASFPMFA*GLYSIL
Trigger: CAAAATGGAGTACAAGCCTCATGCAAACATTGGGAA...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTTCCCAATGTTTGCATaGGGCTTGTACTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWFPMFA*GLYSIL
Trigger: CAAAATGGAGTACAAGCCTCATGCAAACATTGGGAA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAGGTTCAAAAGCCTCTaGGCTTGTCATAATGGGCTT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLRFKSL*ACHNGL
Trigger: AAGCCCATTATGACAAGCTCAGAGGCTTTTGAACCT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAATAACTTTGACGAGATaGTCCAGTCAAAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLITLTR*SSQNLH
Trigger: ATGCAGGTTTTGACTGGATCATCTCGTCAAAGTTAT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAACCTAACATGGCATGTTaGGCCCGTAATTCATTATCC +
Preference number: 4 (lower is better)
Translates to: RKSLDFCRQQRASQKLLQPNMAC*ARNSLS
Trigger: GGATAATGAATTACGGGCTCAACATGCCATGTTAGG...TTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACCCTAACATGGCATGTTaGGCCCGTAATTCATTATCC +
Preference number: 4 (lower is better)
Translates to: KENPWISADSRGLLKSYYPNMAC*ARNSLS
Trigger: GGATAATGAATTACGGGCTCAACATGCCATGTTAGG...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAAAATGGTGTCTGGAGTaGAGTGTTCTCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSKWCLE*SVLILW
Trigger: CCACAATATGAGAACACTTCACTCCAGACACCATTT...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTTTGTTGCAAACTCTaGACGGTAGTTACTAACTCC +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLFCCKL*TVVTNS
Trigger: GGAGTTAGTAACTACCGTTCAGAGTTTGCAACAAAA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACATTTTGTTGCAAACTCTaGACGGTAGTTACTAACTCC +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTFCCKL*TVVTNS
Trigger: GGAGTTAGTAACTACCGTTCAGAGTTTGCAACAAAA...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGAACAGGACATTTCCTTaGACAGCTGATCAATCACAG +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWNRTFP*TADQSQ
Trigger: CTGTGATTGATCAGCTGTTCAAGGAAATGTCCTGTT...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTGTGGGACTAACACTTaGTCACTGAGTAATGCAGTT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNCGTNT*SLSNAV
Trigger: AACTGCATTACTCAGTGATCAAGTGTTAGTCCCACA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAACCCTTATAAATTTGTaGATAAAGCACGTGCACACA +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKTLINL*IKHVHT
Trigger: TGTGTGCACGTGCTTTATTCACAAATTTATAAGGGT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCCTCCTGTACTACCATaGCAACACTTGCCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIPPVLP*QHLPAV
Trigger: AACAGCAGGCAAGTGTTGTCATGGTAGTACAGGAGG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACTACAATGTACTTACTaGTTTCTTAGTGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKLQCTY*FLSAQI
Trigger: AATCTGGGCACTAAGAAATCAGTAAGTACATTGTAG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAACAGATTTTGGAAACTaGAATGCATCAGCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKTDFGN*NASAVV
Trigger: AACTACTGCTGATGCATTTCAGTTTCCAAAATCTGT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACATGCTTGCTGTAATGTaGTTGAGGCTGAATAAGCTC +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHMLAVM*LRLNKL
Trigger: GAGCTTATTCAGCCTCAATCACATTACAGCAAGCAT...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAACCAGTCATAGTGACTaGTTATACACTGTGCTGTGC +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLTSHSD*LYTVLC
Trigger: GCACAGCACAGTGTATAATCAGTCACTATGACTGGT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACACTGTATTTACACATaGGGTATTCTGGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSHCIYT*GILGGS
Trigger: TGAACCACCCAGAATACCTCATGTGTAAATACAGTG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTGGTTTCCCAATGTTTaGATGAGGCTTGTACTCCAT +
Preference number: 4 (lower is better)
Translates to: ILKENPWISADSRGLLKSWFPNV*MRLVLH
Trigger: ATGGAGTACAAGCCTCATGCAAACATTGGGAAACCA...ACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTTCTCTGCATACAGTaGCACCCTGGCCACAGTTAT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILLCIQ*HPGHSY
Trigger: ATAACTGTGGCCAGGGTGGCACTGTATGCAGAGAAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACAGGTGGGTAATTTGTTaGTTCTGCCGATCGATTACA +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHRWVIC*FCRSIT
Trigger: TGTAATCGATCGGCAGAAGCAACAAATTACCCACCT...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGGTGGGTAATTTGTTaGTTCTGCCGATCGATTACA +
Preference number: 4 (lower is better)
Translates to: SILKENPWISADSRGLLKRWVIC*FCRSIT
Trigger: TGTAATCGATCGGCAGAAGCAACAAATTACCCACCT...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAAATCCTTGGATTTCTaGAGACAGCAGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ADSRGLLKSYYKINHLHIKSLDF*RQQRAS
Trigger: AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTT...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp ACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGAAATCCTTGGATTTCTaGAGACAGCAGAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRAFLSSKKILGFLQTAEKSLDF*RQQRAS
Trigger: AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTT...CTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTACCATGACAACACTTaGCTGCTGTTTGAACTCTTG +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHYHDNT*LLFELL
Trigger: CAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGAACAGGCATGTGCTATaGCCTTTATCTGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWNRHVL*PLSGKK
Trigger: TTTCTTGCCAGATAAAGGGCATAGCACATGCCTGTT...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACAATCATATGGCAATATaGCACCCATGGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNNHMAI*HPWHFG
Trigger: CCCAAAATGCCATGGGTGGCATATTGCCATATGATT...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACTCTCTGTGTACAGCTaGAATAGTGTTATTAGACTT +
Preference number: 4 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKLSVYS*NSVIRL
Trigger: AAGTCTAATAACACTATTGCAGCTGTACACAGAGAG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp ACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGTTAGACGGCATCACATaGGCAGTAGGAAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: TRAFLSSKKILGFLQTAELDGIT*AVGRVI
Trigger: GATTACTCTTCCTACTGCCCATGTGATGCCGTCTAA...CTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAATTAGACGGCATCACATaGGCAGTAGGAAGAGTAATC +
Preference number: 4 (lower is better)
Translates to: ENPWISADSRGLLKSYYKLDGIT*AVGRVI
Trigger: GATTACTCTTCCTACTGCCCATGTGATGCCGTCTAA...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACATAATGTCCTAACATaGCATGTTGAGCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLHNVLT*HVEPVI
Trigger: AATTACGGGCTCAACATGCCATGTTAGGACATTATG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAGTTTTGCATCTAACATaGGAAGGCGGATTCCATCTT +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSVLHLT*EGGFHL
Trigger: AAGATGGAATCCGCCTTCCCATGTTAGATGCAAAAC...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACATGTCTCTTCGTAACTaGCACACATCTGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHMSLRN*HTSDSF
Trigger: AAAGCTGTCAGATGTGTGCCAGTTACGAAGAGACAT...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACATGTCTCTTCGTAACTaGCACACATCTGACAGCTTT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNMSLRN*HTSDSF
Trigger: AAAGCTGTCAGATGTGTGCCAGTTACGAAGAGACAT...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACCATCCTAGTTCAAACTaGGTGAGATGCTCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHHPSSN*VRCSSV
Trigger: AACACTAGAGCATCTCACCCAGTTTGAACTAGGATG...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGCATCCTAGTTCAAACTaGGTGAGATGCTCTAGTGTT +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWHPSSN*VRCSSV
Trigger: AACACTAGAGCATCTCACCCAGTTTGAACTAGGATG...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAACACATGAGGTATTCTaGGTGGTTCAAAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLTHEVF*VVQKLN
Trigger: GTTCAGTTTTTGAACCACCCAGAATACCTCATGTGT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACTATACTGTGTCTCCTaGTATGGTTATTTCGATGGT +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSLYCVS*YGYFDG
Trigger: ACCATCGAAATAACCATATCAGGAGACACAGTATAG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCTATACTGTGTCTCCTaGTATGGTTATTTCGATGGT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLYCVS*YGYFDG
Trigger: ACCATCGAAATAACCATATCAGGAGACACAGTATAG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACCACTTGAAGTTGAATaGTCTTCCACGCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLPLEVE*SSTLSE
Trigger: TTCTGATAGCGTGGAAGATCATTCAACTTCAAGTGG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATTCCCAATGTTTGCATaGGGCTTGTACTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLFPMFA*GLYSIL
Trigger: CAAAATGGAGTACAAGCCTCATGCAAACATTGGGAA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCACCACCTACTGCCTGTTaGCCAAGCATTAAATATTTT +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSPPTAC*PSIKYF
Trigger: AAAATATTTAATGCTTGGTCAACAGGCAGTAGGTGG...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAACCACCTACTGCCTGTTaGCCAAGCATTAAATATTTT +
Preference number: 4 (lower is better)
Translates to: SILKENPWISADSRGLLKPPTAC*PSIKYF
Trigger: AAAATATTTAATGCTTGGTCAACAGGCAGTAGGTGG...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGATAACTTTGACGAGATaGTCCAGTCAAAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKITLTR*SSQNLH
Trigger: ATGCAGGTTTTGACTGGATCATCTCGTCAAAGTTAT...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAATGGTGTCTGGAGTaGAGTGTTCTCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: KENPWISADSRGLLKSYYKWCLE*SVLILW
Trigger: CCACAATATGAGAACACTTCACTCCAGACACCATTT...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAAATGGTGTCTGGAGTaGAGTGTTCTCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLKWCLE*SVLILW
Trigger: CCACAATATGAGAACACTTCACTCCAGACACCATTT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCTCTGGAAAAACAGCTaGCCTATCTACAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLWKNS*PIYSTK
Trigger: TTTAGTACTGTAGATAGGTCAGCTGTTTTTCCAGAG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTGCTGCACTTGTGGCTaGTCTATTTTAGACGTTATT +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHCCTCG*SILDVI
Trigger: AATAACGTCTAAAATAGATCAGCCACAAGTGCAGCA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACGTGCCTTTGATTCAGTaGATTTTATCTGTACAGGCA +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNVPLIQ*ILSVQA
Trigger: TGCCTGTACAGATAAAATTCACTGAATCAAAGGCAC...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCGGAACAGTTGTGGCCTaGCACAATGATTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: ISADSRGLLKSYYKINHLGTVVA*HNDSLA
Trigger: TGCTAATGAATCATTGTGGCAGGCCACAACTGTTCC...GAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGAACAGGAAGTTCCAATaGCAGTGTCTCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQNRKFQ*QCLHCQ
Trigger: CTGACAGTGGAGACACTGGCATTGGAACTTCCTGTT...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATGGTTTCCCAATGTTTaGATGAGGCTTGTACTCCAT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLWFPNV*MRLVLH
Trigger: ATGGAGTACAAGCCTCATGCAAACATTGGGAAACCA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp AGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAATGGTTTCCCAATGTTTaGATGAGGCTTGTACTCCAT +
Preference number: 4 (lower is better)
Translates to: RKSLDFCRQQRASQKLLQWFPNV*MRLVLH
Trigger: ATGGAGTACAAGCCTCATGCAAACATTGGGAAACCA...TTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAGATCCAGTCAAAACCTaGATTGGTGTTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLDPVKT*IGVSLP
Trigger: AGGAAGTGAAACACCAATGCAGGTTTTGACTGGATC...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAATCATATGGCAATATaGCACCCATGGCATTTTGGG +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLNHMAI*HPWHFG
Trigger: CCCAAAATGCCATGGGTGGCATATTGCCATATGATT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGATCTGGGCTTCTCACTaGCAATATGGTGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQIWASH*QYGDAS
Trigger: GGAAGCATCACCATATTGCCAGTGAGAAGCCCAGAT...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360290.7
CDS-3UTR CCA 90 bp ATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCATTTCGATGGTTAGATaGAACAGTTGTGGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: ISADSRGLLKSYYKINHLISMVR*NSCGLP
Trigger: TGGCAGGCCACAACTGTTCCATCTAACCATCGAAAT...GAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp TTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCAGTCAAAACCTGCATTaGTGTTTCACTTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: FLQTAEGFSKVTTKLITSSQNLH*CFTSLS
Trigger: CGACAAGGAAGTGAAACACCAATGCAGGTTTTGACT...GGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACCATAATGTCCTAACATaGCATGTTGAGCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHHNVLT*HVEPVI
Trigger: AATTACGGGCTCAACATGCCATGTTAGGACATTATG...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAGTTTTGCATCTAACATaGGAAGGCGGATTCCATCTT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLVLHLT*EGGFHL
Trigger: AAGATGGAATCCGCCTTCCCATGTTAGATGCAAAAC...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAAAATTTCACACCTCTTaGGAAATCCACAATCACTCT +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLKFHTS*EIHNHS
Trigger: AGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAAAATTTCACACCTCTTaGGAAATCCACAATCACTCT +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTKFHTS*EIHNHS
Trigger: AGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTT...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATATTTGCTGCACTTGTaGCTGATCTATTTTAGACGT +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLYLLHL*LIYFRR
Trigger: ACGTCTAAAATAGATCAGCCACAAGTGCAGCAAATA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATATGATATAATCATATaGCAATATGCCACCCATGGC +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLYDIII*QYATHG
Trigger: GCCATGGGTGGCATATTGCCATATGATTATATCATA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTAGGAGGGACTATCAGTaGACTTCAGTAATTTGTAGA +
Preference number: 4 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASRRDYQ*TSVICR
Trigger: TCTACAAATTACTGAAGTCCACTGATAGTCCCTCCT...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000392500.7
CDS-3UTR TCA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACCTATACTGTGTCTCCTaGTATGGTTATTTCGATGGT +
Preference number: 4 (lower is better)
Translates to: KENPWISADSRGLLKSYYLYCVS*YGYFDG
Trigger: ACCATCGAAATAACCATATCAGGAGACACAGTATAG...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp AGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAACTATACTGTGTCTCCTaGTATGGTTATTTCGATGGT +
Preference number: 4 (lower is better)
Translates to: RKSLDFCRQQRASQKLLQLYCVS*YGYFDG
Trigger: ACCATCGAAATAACCATATCAGGAGACACAGTATAG...TTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCCTAAGTTTGGAAATTaGAGCGCTGGAATTAGACGG +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIPKFGN*SAGIRR
Trigger: CCGTCTAATTCCAGCGCTTCAATTTCCAAACTTAGG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCCCACCTACTGCCTGTTaGCCAAGCATTAAATATTTT +
Preference number: 4 (lower is better)
Translates to: FLQTAEGFSKVTTKLITSPPTAC*PSIKYF
Trigger: AAAATATTTAATGCTTGGTCAACAGGCAGTAGGTGG...GGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACCACCTACTGCCTGTTaGCCAAGCATTAAATATTTT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLPPTAC*PSIKYF
Trigger: AAAATATTTAATGCTTGGTCAACAGGCAGTAGGTGG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATTTGATTCCCACTTACTaGAATCCTGATAGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: DSRGLLKSYYKINHLHINLIPTY*NPDSQV
Trigger: CACCTGGCTATCAGGATTTCAGTAAGTGGGAATCAA...ATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCCTAACATGGCATGTTaGGCCCGTAATTCATTATCC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIPNMAC*ARNSLS
Trigger: GGATAATGAATTACGGGCTCAACATGCCATGTTAGG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTAACACTTGATCACTaGGTAATGCAGTTGTCTCCC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILTLDH*VMQLSP
Trigger: GGGAGACAACTGCATTACTCAGTGATCAAGTGTTAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACTCTGGAAAAACAGCTaGCCTATCTACAGTACTAAA +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLLWKNS*PIYSTK
Trigger: TTTAGTACTGTAGATAGGTCAGCTGTTTTTCCAGAG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCTACAATGTACTTACTaGTTTCTTAGTGCCCAGATT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLQCTY*FLSAQI
Trigger: AATCTGGGCACTAAGAAATCAGTAAGTACATTGTAG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAACAGATTTTGGAAACTaGAATGCATCAGCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSTDFGN*NASAVV
Trigger: AACTACTGCTGATGCATTTCAGTTTCCAAAATCTGT...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACGTTAGCATTAAATATTaGATCCTAGGTGCCACACTT +
Preference number: 4 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHVSIKY*ILGATL
Trigger: AAGTGTGGCACCTAGGATTCAATATTTAATGCTAAC...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACATGGCAGTTTCAAATaGTATAGTCTGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLHGSFK*YSLSEH
Trigger: ATGCTCACTCAGACTATATCATTTGAAACTGCCATG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGGGAACAGTTGTGGCCTaGCACAATGATTCATTAGCA +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQGTVVA*HNDSLA
Trigger: TGCTAATGAATCATTGTGGCAGGCCACAACTGTTCC...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCGAAAGTCTTCAATTTaGTGCTGTTGCCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIRKSSI*CCCQGA
Trigger: AGCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCAGGTGGGTAATTTGTTaGTTCTGCCGATCGATTACA +
Preference number: 4 (lower is better)
Translates to: ISADSRGLLKSYYKINHLRWVIC*FCRSIT
Trigger: TGTAATCGATCGGCAGAAGCAACAAATTACCCACCT...GAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAAAATATAAATGGTTTTaGCTCCTGTACTACCATGAC +
Preference number: 4 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTKYKWF*LLYYHD
Trigger: GTCATGGTAGTACAGGAGGCAAAACCATTTATATTT...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTTAAGGACTCTGGGATaGAGGAGCACTACAATGTAC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILRTLG*RSTTMY
Trigger: GTACATTGTAGTGCTCCTGCATCCCAGAGTCCTTAA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAATATGGTTATTTCGATaGTTAGATGGAACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLIWLFR*LDGTVV
Trigger: CACAACTGTTCCATCTAACCATCGAAATAACCATAT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATACATAATGTCCTAACATaGCATGTTGAGCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: ADSRGLLKSYYKINHLHIHNVLT*HVEPVI
Trigger: AATTACGGGCTCAACATGCCATGTTAGGACATTATG...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACCATAATGTCCTAACATaGCATGTTGAGCCCGTAATT +
Preference number: 4 (lower is better)
Translates to: KENPWISADSRGLLKSYYHNVLT*HVEPVI
Trigger: AATTACGGGCTCAACATGCCATGTTAGGACATTATG...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACCTCAAAGAAAATCCTTaGATTTCTGCAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: KENPWISADSRGLLKSYYLKENP*ISADSR
Trigger: TCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAG...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATACTCAAAGAAAATCCTTaGATTTCTGCAGACAGCAGA +
Preference number: 4 (lower is better)
Translates to: ADSRGLLKSYYKINHLHILKENP*ISADSR
Trigger: TCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAG...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGATACCAACAGAAACATaGACAACACTCATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWIPTET*TTLIWK
Trigger: CTTCCAAATGAGTGTTGTCCATGTTTCTGTTGGTAT...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCAATACCAACAGAAACATaGACAACACTCATTTGGAAG +
Preference number: 4 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSIPTET*TTLIWK
Trigger: CTTCCAAATGAGTGTTGTCCATGTTTCTGTTGGTAT...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACGACCTAAATGAGACTTaGTTGCATCACAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNDLNET*LHHKIK
Trigger: TTTGATCTTGTGATGCAACCAAGTCTCATTTAGGTC...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGGACCTAAATGAGACTTaGTTGCATCACAAGATCAAA +
Preference number: 4 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWDLNET*LHHKIK
Trigger: TTTGATCTTGTGATGCAACCAAGTCTCATTTAGGTC...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTATTTGCTGCACTTGTaGCTGATCTATTTTAGACGT +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNYLLHL*LIYFRR
Trigger: ACGTCTAAAATAGATCAGCCACAAGTGCAGCAAATA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTATGATATAATCATATaGCAATATGCCACCCATGGC +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNYDIII*QYATHG
Trigger: GCCATGGGTGGCATATTGCCATATGATTATATCATA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAACACATGAGGTATTCTaGGTGGTTCAAAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLTHEVF*VVQKLN
Trigger: GTTCAGTTTTTGAACCACCCAGAATACCTCATGTGT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp GACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATCCACTTGAAGTTGAATaGTCTTCCACGCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: DSRGLLKSYYKINHLHINPLEVE*SSTLSE
Trigger: TTCTGATAGCGTGGAAGATCATTCAACTTCAAGTGG...ATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp GACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATTTCCCAATGTTTGCATaGGGCTTGTACTCCATTTTG +
Preference number: 4 (lower is better)
Translates to: DSRGLLKSYYKINHLHINFPMFA*GLYSIL
Trigger: CAAAATGGAGTACAAGCCTCATGCAAACATTGGGAA...ATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp GACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATAAATGGTGTCTGGAGTaGAGTGTTCTCATATTGTGG +
Preference number: 4 (lower is better)
Translates to: DSRGLLKSYYKINHLHINKWCLE*SVLILW
Trigger: CCACAATATGAGAACACTTCACTCCAGACACCATTT...ATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCAACAGGACATTTCCTTaGACAGCTGATCAATCACAG +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSINRTFP*TADQSQ
Trigger: CTGTGATTGATCAGCTGTTCAAGGAAATGTCCTGTT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCATGCTTGCTGTAATGTaGTTGAGGCTGAATAAGCTC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIMLAVM*LRLNKL
Trigger: GAGCTTATTCAGCCTCAATCACATTACAGCAAGCAT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAGTTAGCATTAAATATTaGATCCTAGGTGCCACACTT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLVSIKY*ILGATL
Trigger: AAGTGTGGCACCTAGGATTCAATATTTAATGCTAAC...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCACTGTATTTACACATaGGGTATTCTGGGTGGTTCA +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIHCIYT*GILGGS
Trigger: TGAACCACCCAGAATACCTCATGTGTAAATACAGTG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTGGTTTCCCAATGTTTaGATGAGGCTTGTACTCCAT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIWFPNV*MRLVLH
Trigger: ATGGAGTACAAGCCTCATGCAAACATTGGGAAACCA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp GACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATGATCCAGTCAAAACCTaGATTGGTGTTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: DSRGLLKSYYKINHLHINDPVKT*IGVSLP
Trigger: AGGAAGTGAAACACCAATGCAGGTTTTGACTGGATC...ATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCAACAGGCATGTGCTATaGCCTTTATCTGGCAAGAAA +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSINRHVL*PLSGKK
Trigger: TTTCTTGCCAGATAAAGGGCATAGCACATGCCTGTT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTCAAACTGGGTGAGATaGTCTAGTGTTGCTATTTGC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISNWVR*SSVAIC
Trigger: GCAAATAGCAACACTAGAGCATCTCACCCAGTTTGA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTACTGTTACTTTATGCTTaGTGTAATGTGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLLLLYA*CNVIEA
Trigger: AGCCTCAATCACATTACAGCAAGCATAAAGTAACAG...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp AGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTATATGGTTATTTCGATaGTTAGATGGAACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: SISILKENPWISADSRGLIWLFR*LDGTVV
Trigger: CACAACTGTTCCATCTAACCATCGAAATAACCATAT...AAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CCA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACATATGGTTATTTCGATaGTTAGATGGAACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: VMSLATFHYGSITQQHLNIWLFR*LDGTVV
Trigger: CACAACTGTTCCATCTAACCATCGAAATAACCATAT...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCAGTCAAAACCTGCATTaGTGTTTCACTTCCTTGTCG +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISQNLH*CFTSLS
Trigger: CGACAAGGAAGTGAAACACCAATGCAGGTTTTGACT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCATAACTTTGACGAGATaGTCCAGTCAAAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIITLTR*SSQNLH
Trigger: ATGCAGGTTTTGACTGGATCATCTCGTCAAAGTTAT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTGCTGCACTTGTGGCTaGTCTATTTTAGACGTTATT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSICCTCG*SILDVI
Trigger: AATAACGTCTAAAATAGATCAGCCACAAGTGCAGCA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTTTTCTGAGCTCAAGTaGAAAGATAGCTATTGTGCC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIFSELK*KDSYCA
Trigger: GGCACAATAGCTATCTTTTCACTTGAGCTCAGAAAA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCATGGCAGTTTCAAATaGTATAGTCTGAGTGAGCAT +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIHGSFK*YSLSEH
Trigger: ATGCTCACTCAGACTATATCATTTGAAACTGCCATG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR GCA 90 bp AGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATGTAGATCCAGTCAAAACCTaGATTGGTGTTTCACTTCCT +
Preference number: 4 (lower is better)
Translates to: SRGLLKSYYKINHLHINVDPVKT*IGVSLP
Trigger: AGGAAGTGAAACACCAATGCAGGTTTTGACTGGATC...TACATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCATGACAACACTTGCCTaGTGTTTGAACTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIMTTLA*CLNSCS
Trigger: TGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCAT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
3UTR CAA 72 bp TGTGATATGCTCTTTATCAAATCAATATTATCCTGCTaGAGTCACACCCTCTACCCCTCCATCTCTTATTTA +
Preference number: 4 (lower is better)
Translates to: CDMLFIKSILSC*SHTLYPSISYL
Trigger: TAAATAAGAGATGGAGGGGTAGAGGGTGTGACTCAAGCAGGATAATATTGATTTGATAAAGAGCATATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR TCA 90 bp AGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATGTAATAACTTTGACGAGATaGTCCAGTCAAAACCTGCAT +
Preference number: 4 (lower is better)
Translates to: SRGLLKSYYKINHLHINVITLTR*SSQNLH
Trigger: ATGCAGGTTTTGACTGGATCATCTCGTCAAAGTTAT...TACATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR GCA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCAAATATAAATGGTTTTaGCTCCTGTACTACCATGAC +
Preference number: 4 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIKYKWF*LLYYHD
Trigger: GTCATGGTAGTACAGGAGGCAAAACCATTTATATTT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CCA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGATATGGTTATTTCGATaGTTAGATGGAACAGTTGTG +
Preference number: 4 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQIWLFR*LDGTVV
Trigger: CACAACTGTTCCATCTAACCATCGAAATAACCATAT...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
3UTR CAA 72 bp CATCTCTTATTTAGTCTTGACCTAAATGAGACTTGGTaGCATCACAAGATCAAACCAACTTACAAAGGACAA +
Preference number: 4 (lower is better)
Translates to: HLLFSLDLNETW*HHKIKPTYKGQ
Trigger: TTGTCCTTTGTAAGTTGGTTTGATCTTGTGATGCAACCAAGTCTCATTTAGGTCAAGACTAAATAAGAGATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS TCA 90 bp GATTCGCCGCACTGCCGGCGCCTGCCATGGCCAAGCCGGCTGGGCTaGGGCCCGCGCCGGGGAAGCGGCGACTCGGCGGTGACGGCTGCT +
Preference number: 5 (lower is better)
Translates to: DSPHCRRLPWPSRLG*GPRRGSGDSAVTAA
Trigger: AGCAGCCGTCACCGCCGAGTCGCCGCTTCCCCGGCGCGGGCCTCAGCCCAGCCGGCTTGGCCATGGCAGGCGCCGGCAGTGCGGCGAATC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS GCA 90 bp GGGCCGGGTGGGCCAGGGACGCCCGACTCCTCACGTCCGTCCTCCTaGTTCTTCGGCGGCGGAAACTTGCGCGGAGCGTGGGCCTCGGCG +
Preference number: 5 (lower is better)
Translates to: GPGGPGTPDSSRPSS*FFGGGNLRGAWASA
Trigger: CGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGAGGACGGACGTGAGGAGTCGGGCGTCCCTGGCCCACCCGGCCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 90 bp CGCGGAGCGTGGGCCTCGGCGACACGGGCAGGAGGAAAGGCGGGATaGCTGGTTAACGGCTGCTCAGCTACGGGCGGGGAGCGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RGAWASATRAGGKAG*LVNGCSATGGERRG
Trigger: GCCCCTGCGCTCCCCGCCCGTAGCTGAGCAGCCGTTAACCAGCCATCCCGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 90 bp TCCGGAGCCAGGAAGCGCCCCCACATCGCGGGCGAGAGGGCCGGGTaGGCCAGGGACGCCCGACTCCTCACGTCCGTCCTCCTGCTTCTT +
Preference number: 5 (lower is better)
Translates to: SGARKRPHIAGERAG*ARDARLLTSVLLLL
Trigger: AAGAAGCAGGAGGACGGACGTGAGGAGTCGGGCGTCCCTGGCCCACCCGGCCCTCTCGCCCGCGATGTGGGGGCGCTTCCTGGCTCCGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 90 bp GAGCGTGGGCCTCGGCGACACGGGCAGGAGGAAAGGCGGGATGGCTaGTTAACGGCTGCTCAGCTACGGGCGGGGAGCGCAGGGGCCAGA +
Preference number: 5 (lower is better)
Translates to: ERGPRRHGQEERRDG*LTAAQLRAGSAGAR
Trigger: TCTGGCCCCTGCGCTCCCCGCCCGTAGCTGAGCAGCCGTTAACCAGCCATCCCGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCACGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS GCA 90 bp CCGACTCCTCACGTCCGTCCTCCTGCTTCTTCGGCGGCGGAAACTTaGGCGGAGCGTGGGCCTCGGCGACACGGGCAGGAGGAAAGGCGG +
Preference number: 5 (lower is better)
Translates to: PTPHVRPPASSAAET*AERGPRRHGQEERR
Trigger: CCGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGAGGACGGACGTGAGGAGTCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS GCA 90 bp TCGGCGACACGGGCAGGAGGAAAGGCGGGATGGCTGGTTAACGGCTaGTCAGCTACGGGCGGGGAGCGCAGGGGCCAGATTCGCCGCACT +
Preference number: 5 (lower is better)
Translates to: SATRAGGKAGWLVNG*SATGGERRGQIRRT
Trigger: AGTGCGGCGAATCTGGCCCCTGCGCTCCCCGCCCGTAGCTGAGCAGCCGTTAACCAGCCATCCCGCCTTTCCTCCTGCCCGTGTCGCCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 90 bp CGTCCGTCCTCCTGCTTCTTCGGCGGCGGAAACTTGCGCGGAGCGTaGGCCTCGGCGACACGGGCAGGAGGAAAGGCGGGATGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: RPSSCFFGGGNLRGA*ASATRAGGKAGWLV
Trigger: AACCAGCCATCCCGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGAGGACGGACG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTCGGCGGCGGAAACTaGCGCGGAGCGTGGGCCTCG +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLFGGGN*RGAWAS
Trigger: CGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368491.8
CDS TCA 90 bp CCACAGTCGCCCTACTCCATGCTTTTCCCAGATATCCCCAGCCAGTaGCAAAGCTCAGCCGAGATACTTGGGCCTGGCCATTCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: PQSPYSMLFPDIPSQ*QSSAEILGPGHSLQ
Trigger: TTGCAAAGAATGGCCAGGCCCAAGTATCTCGGCTGAGCTTTGTCACTGGCTGGGGATATCTGGGAAAAGCATGGAGTAGGGCGACTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489276.1
CDS TCA 90 bp CTTCTCTGCATACAGTGCCACCCTGGCCACAGTTATCCGGGGCAGTaGGTTTGGATAAAGATGACCATTTCCGAAGTGGCCGGAAGTCCT +
Preference number: 5 (lower is better)
Translates to: LLCIQCHPGHSYPGQ*VWIKMTISEVAGSP
Trigger: AGGACTTCCGGCCACTTCGGAAATGGTCATCTTTATCCAAACTCACTGCCCCGGATAACTGTGGCCAGGGTGGCACTGTATGCAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATGTCTGCTGCCTAGATaGGTCAGGTTCCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKCLLPR*VRFLAL
Trigger: CAGGGCCAGGAACCTGACCAATCTAGGCAGCAGACA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTGTCTGCTGCCTAGATaGGTCAGGTTCCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWCLLPR*VRFLAL
Trigger: CAGGGCCAGGAACCTGACCAATCTAGGCAGCAGACA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATCCGGGGCAGTGAGTTaGGATAAAGATGACCATTTC +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKSGAVS*DKDDHF
Trigger: GAAATGGTCATCTTTATCCAAACTCACTGCCCCGGA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATCGAAAGTCTTCAATTaGCTGCTGTTGCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKSKVFN*LLLPRS
Trigger: GCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCGA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATGCAGGTGGGTAATTaGTTGCTTCTGCCGATCGAT +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKMQVGN*LLLPID
Trigger: ATCGATCGGCAGAAGCAACAAATTACCCACCTGCAT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATCAAATAGTGGCCGTTaGGAAAGAACTGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKSNSGR*ERTVCC
Trigger: GCAGCAGACAGTTCTTTCCAAACGGCCACTATTTGA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAACACTTGCCTGCTGTTaGAACTCTTGTTCAGCCAGC +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTTLACC*NSCSAS
Trigger: GCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGT...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAGGCTTGTACTCCATTTaGAGCCATCTGGTGTCAATG +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLGLYSI*SHLVSM
Trigger: CATTGACACCAGATGGCTCAAAATGGAGTACAAGCC...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAGTGGTTTCCCAATGTTaGCATGAGGCTTGTACTCCA +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTVVSQC*HEACTP
Trigger: TGGAGTACAAGCCTCATGCAAACATTGGGAAACCAC...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAATCTCCAAACCATTCCTaGACTCTTCTCTGCATACAG +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKSPNHS*TLLCIQ
Trigger: CTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAGA...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAACTTGTCATAATGGGCTaGCTTTCAGGTAAGGCACTA +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKLVIMG*LSGKAL
Trigger: TAGTGCCTTACCTGAAAGCAAGCCCATTATGACAAG...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTCGAAAGTCTTCAATTaGCTGCTGTTGCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: RAFLSSKKILGFLQTAEGSKVFN*LLLPRS
Trigger: GCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCGA...GCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAATGCAGGTGGGTAATTaGTTGCTTCTGCCGATCGAT +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLMQVGN*LLLPID
Trigger: ATCGATCGGCAGAAGCAACAAATTACCCACCTGCAT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGCATGGGGGAGGGTGGTaGGGATTCTATTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWHGGGW*GFYSKR
Trigger: TCTCTTTGAATAGAATCCCAACCACCCTCCCCCATG...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS TCA 90 bp TTGGAAAGAACTGTCTGCTGCCTAGATTGGTCAGGTTCCTGGCCCTaGTCCAATAAAGAGCATGTCTCATCTGTTTGTCTTTGGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LERTVCCLDWSGSWP*SNKEHVSSVCLWFS
Trigger: TGAAAACCAAAGACAAACAGATGAGACATGCTCTTTATTGGATCAGGGCCAGGAACCTGACCAATCTAGGCAGCAGACAGTTCTTTCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS CCA 90 bp TCCACTGGAGGGAAGCAAACACTAGATTTTGCACCTTACCTGCATTaGTGTTTCACTTCCTTGTCGAAAGTCTTCAATTTGCTGCTGTTG +
Preference number: 5 (lower is better)
Translates to: STGGKQTLDFAPYLH*CFTSLSKVFNLLLL
Trigger: CAACAGCAGCAAATTGAAGACTTTCGACAAGGAAGTGAAACACCAATGCAGGTAAGGTGCAAAATCTAGTGTTTGCTTCCCTCCAGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483035.5
CDS-3UTR CAA 90 bp AAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGGTGGTTTCCCAATGTTaGCATGAGGCTTGTACTCCA +
Preference number: 5 (lower is better)
Translates to: KSISILKENPWISADSRGVVSQC*HEACTP
Trigger: TGGAGTACAAGCCTCATGCAAACATTGGGAAACCAC...CCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTCCGGGGCAGTGAGTTaGGATAAAGATGACCATTTC +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWSGAVS*DKDDHF
Trigger: GAAATGGTCATCTTTATCCAAACTCACTGCCCCGGA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGCTCTAAAGTCCTCCTaGCTACAGCTCTCAAATTTA +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKALKSS*LQLSNL
Trigger: TAAATTTGAGAGCTGTAGCAAGGAGGACTTTAGAGC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACACTTGTCATAATGGGCTaGCTTTCAGGTAAGGCACTA +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTLVIMG*LSGKAL
Trigger: TAGTGCCTTACCTGAAAGCAAGCCCATTATGACAAG...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTCGAAAGTCTTCAATTaGCTGCTGTTGCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNSKVFN*LLLPRS
Trigger: GCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCGA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCCAGTCAAAACCTGCATaGGTGTTTCACTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: AFLSSKKILGFLQTAEGFQSKPA*VFHFLV
Trigger: GACAAGGAAGTGAAACACCAATGCAGGTTTTGACTG...GAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATGCAAGTCATGTCACTaGCAACCTTCCATTATGGCT +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLCKSCH*QPSIMA
Trigger: AGCCATAATGGAAGGTTGCAAGTGACATGACTTGCA...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAGGTACTCTTCACAGCTaGGTCCTACAATCAGTAGTT +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTGTLHS*VLQSVV
Trigger: AACTACTGATTGTAGGACCAAGCTGTGAAGAGTACC...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACCTGCTGTTTGAACTCTaGTTCAGCCAGCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHLLFEL*FSQPLK
Trigger: TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTCAATATTATCCTGCTaGAGTCACACCCTCTACCCC +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNSILSC*SHTLYP
Trigger: GGGGTAGAGGGTGTGACTCAAGCAGGATAATATTGA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTCAATATTATCCTGCTaGAGTCACACCCTCTACCCC +
Preference number: 5 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHSILSC*SHTLYP
Trigger: GGGGTAGAGGGTGTGACTCAAGCAGGATAATATTGA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGGCCACCCATGGCATTTaGGGGCAAAGTTGGAAATTT +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWATHGI*GQSWKF
Trigger: AAATTTCCAACTTTGCCCCAAAATGCCATGGGTGGC...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGCACCTTACTACTTCTaGTCATCACAACAATGCGAT +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKAPYYF*SSQQCD
Trigger: ATCGCATTGTTGTGATGACAAGAAGTAGTAAGGTGC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS CCA 90 bp CCACTGTCAGAAGCTATACTGTGTCTCCTGATATGGTTATTTCGATaGTTAGATGGAACAGTTGTGGCCTGCCACAATGATTCATTAGCA +
Preference number: 5 (lower is better)
Translates to: PLSEAILCLLIWLFR*LDGTVVACHNDSLA
Trigger: TGCTAATGAATCATTGTGGCAGGCCACAACTGTTCCATCTAACCATCGAAATAACCATATCAGGAGACACAGTATAGCTTCTGACAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000462101.1
ENST00000476150.5
ENST00000483035.5
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAATGTGCCACTTGAAGTaGAATGATCTTCCACGCTAT +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLMCHLK*NDLPRY
Trigger: ATAGCGTGGAAGATCATTCAACTTCAAGTGGCACAT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAATGTGCCACTTGAAGTaGAATGATCTTCCACGCTAT +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTMCHLK*NDLPRY
Trigger: ATAGCGTGGAAGATCATTCAACTTCAAGTGGCACAT...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAAATGATTCCCTAAGTTaGGAAATTGAAGCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKNDSLS*EIEALE
Trigger: TTCCAGCGCTTCAATTTCCAAACTTAGGGAATCATT...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTGTACTCCATTTaGAGCCATCTGGTGTCAATG +
Preference number: 5 (lower is better)
Translates to: TRAFLSSKKILGFLQTAEGLYSI*SHLVSM
Trigger: CATTGACACCAGATGGCTCAAAATGGAGTACAAGCC...CTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAGGCTTGTACTCCATTTaGAGCCATCTGGTGTCAATG +
Preference number: 5 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLGLYSI*SHLVSM
Trigger: CATTGACACCAGATGGCTCAAAATGGAGTACAAGCC...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAGGCTTGTACTCCATTTaGAGCCATCTGGTGTCAATG +
Preference number: 5 (lower is better)
Translates to: ENPWISADSRGLLKSYYKGLYSI*SHLVSM
Trigger: CATTGACACCAGATGGCTCAAAATGGAGTACAAGCC...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAGTGGTTTCCCAATGTTaGCATGAGGCTTGTACTCCA +
Preference number: 5 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLVVSQC*HEACTP
Trigger: TGGAGTACAAGCCTCATGCAAACATTGGGAAACCAC...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAATCCGGGGCAGTGAGTTaGGATAAAGATGACCATTTC +
Preference number: 5 (lower is better)
Translates to: RKSLDFCRQQRASQKLLQSGAVS*DKDDHF
Trigger: GAAATGGTCATCTTTATCCAAACTCACTGCCCCGGA...TTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAATCCGGGGCAGTGAGTTaGGATAAAGATGACCATTTC +
Preference number: 5 (lower is better)
Translates to: ENPWISADSRGLLKSYYKSGAVS*DKDDHF
Trigger: GAAATGGTCATCTTTATCCAAACTCACTGCCCCGGA...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTTCTCCAAACCATTCCTaGACTCTTCTCTGCATACAG +
Preference number: 5 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASSPNHS*TLLCIQ
Trigger: CTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAGA...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAGCTCTAAAGTCCTCCTaGCTACAGCTCTCAAATTTA +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTALKSS*LQLSNL
Trigger: TAAATTTGAGAGCTGTAGCAAGGAGGACTTTAGAGC...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGTCGAAAGTCTTCAATTaGCTGCTGTTGCCAAGGAGC +
Preference number: 5 (lower is better)
Translates to: TRAFLSSKKILGFLQTAESKVFN*LLLPRS
Trigger: GCTCCTTGGCAACAGCAGCAAATTGAAGACTTTCGA...CTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACCAGTCAAAACCTGCATaGGTGTTTCACTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHQSKPA*VFHFLV
Trigger: GACAAGGAAGTGAAACACCAATGCAGGTTTTGACTG...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCAGTCAAAACCTGCATaGGTGTTTCACTTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNQSKPA*VFHFLV
Trigger: GACAAGGAAGTGAAACACCAATGCAGGTTTTGACTG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATACAGGTGGGTAATTTGTaGCTTCTGCCGATCGATTAC +
Preference number: 5 (lower is better)
Translates to: ADSRGLLKSYYKINHLHIQVGNL*LLPIDY
Trigger: GTAATCGATCGGCAGAAGCAACAAATTACCCACCTG...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAACAGGTGGGTAATTTGTaGCTTCTGCCGATCGATTAC +
Preference number: 5 (lower is better)
Translates to: ENPWISADSRGLLKSYYKQVGNL*LLPIDY
Trigger: GTAATCGATCGGCAGAAGCAACAAATTACCCACCTG...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAATGCAGGTGGGTAATTaGTTGCTTCTGCCGATCGAT +
Preference number: 5 (lower is better)
Translates to: ADSRGLLKSYYKINHLHIMQVGN*LLLPID
Trigger: ATCGATCGGCAGAAGCAACAAATTACCCACCTGCAT...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACATGCAGGTGGGTAATTaGTTGCTTCTGCCGATCGAT +
Preference number: 5 (lower is better)
Translates to: KENPWISADSRGLLKSYYMQVGN*LLLPID
Trigger: ATCGATCGGCAGAAGCAACAAATTACCCACCTGCAT...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAAGTAGATGCAAGCTTTaGCTCAAATTCCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLSRCKL*LKFPLL
Trigger: CAACAAGGGGAATTTGAGCAAAAGCTTGCATCTACT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTCCTCAAAGAAAATCCTaGGATTTCTGCAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: ILKENPWISADSRGLLKSPQRKS*DFCRQQ
Trigger: CTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGG...ACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp TACCATGACAACACTTGCCTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAGCATCTTTCTACTTTTaGTTGCAAACTCTGAACGGT +
Preference number: 5 (lower is better)
Translates to: YHDNTCLLFELLFSQPLKASFYF*LQTLNG
Trigger: ACCGTTCAGAGTTTGCAACAAAAAGTAGAAAGATGC...TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAGGCAAGTGTTGTCATGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTGCAAGTCATGTCACTaGCAACCTTCCATTATGGCT +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWCKSCH*QPSIMA
Trigger: AGCCATAATGGAAGGTTGCAAGTGACATGACTTGCA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAAACACTTTCCAGCCCTaGAGATTGTCTCTACAACAA +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLNTFQP*RLSLQQ
Trigger: TTGTTGTAGAGACAATCTCAAGGGCTGGAAAGTGTT...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTAGCACCTTACTACTTCTaGTCATCACAACAATGCGAT +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLAPYYF*SSQQCD
Trigger: ATCGCATTGTTGTGATGACAAGAAGTAGTAAGGTGC...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS GCA 90 bp ATTAGGCTCCTTGCCCTGAGCACGCTGATTAAGAATACTACACAATaGTTTCAAGTCAAACAAACAACAGGACATTTCCTTGAACAGCTG +
Preference number: 5 (lower is better)
Translates to: IRLLALSTLIKNTTQ*FQVKQTTGHFLEQL
Trigger: CAGCTGTTCAAGGAAATGTCCTGTTGTTTGTTTGACTTGAAAGCATTGTGTAGTATTCTTAATCAGCGTGCTCAGGGCAAGGAGCCTAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS GCA 90 bp TACTGTACTCATAACATCCACTGGAGGGAAGCAAACACTAGATTTTaGACCTTACCTGCATTGGTGTTTCACTTCCTTGTCGAAAGTCTT +
Preference number: 5 (lower is better)
Translates to: YCTHNIHWREANTRF*TLPALVFHFLVESL
Trigger: AAGACTTTCGACAAGGAAGTGAAACACCAATGCAGGTAAGGTGCAAAATCTAGTGTTTGCTTCCCTCCAGTGGATGTTATGAGTACAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483035.5
CDS CCA 90 bp CGGTCTGATATTGTAGTCCTTAATTCATCAATGTCTCTTCGTAACTaGCACACATCTGACAGCTTTTTAGTGAGTGTTTCTGTGCTGTGG +
Preference number: 5 (lower is better)
Translates to: RSDIVVLNSSMSLRN*HTSDSFLVSVSVLW
Trigger: CCACAGCACAGAAACACTCACTAAAAAGCTGTCAGATGTGTGCCAGTTACGAAGAGACATTGATGAATTAAGGACTACAATATCAGACCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAATGTGCCACTTGAAGTaGAATGATCTTCCACGCTAT +
Preference number: 5 (lower is better)
Translates to: SILKENPWISADSRGLLKMCHLK*NDLPRY
Trigger: ATAGCGTGGAAGATCATTCAACTTCAAGTGGCACAT...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp ATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCGTGGTTTCCCAATGTTaGCATGAGGCTTGTACTCCA +
Preference number: 5 (lower is better)
Translates to: ISADSRGLLKSYYKINHLVVSQC*HEACTP
Trigger: TGGAGTACAAGCCTCATGCAAACATTGGGAAACCAC...GAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATCTCCAAACCATTCCTaGACTCTTCTCTGCATACAG +
Preference number: 5 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLSPNHS*TLLCIQ
Trigger: CTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAGA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACTCTCCAAACCATTCCTaGACTCTTCTCTGCATACAG +
Preference number: 5 (lower is better)
Translates to: KENPWISADSRGLLKSYYSPNHS*TLLCIQ
Trigger: CTGTATGCAGAGAAGAGTCAAGGAATGGTTTGGAGA...GTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp AGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCCTCTCAAATTTATACTaGCAGTCCAGAGTTGATGAC +
Preference number: 5 (lower is better)
Translates to: RAFLSSKKILGFLQTAEGLSNLY*QSRVDD
Trigger: GTCATCAACTCTGGACTGCAAGTATAAATTTGAGAG...GCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CTGCAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTACTCTCAAATTTATACTaGCAGTCCAGAGTTGATGAC +
Preference number: 5 (lower is better)
Translates to: LQAKRHKRFSLCTAAIVLLSNLY*QSRVDD
Trigger: GTCATCAACTCTGGACTGCAAGTATAAATTTGAGAG...TAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAGCTCTAAAGTCCTCCTaGCTACAGCTCTCAAATTTA +
Preference number: 5 (lower is better)
Translates to: SILKENPWISADSRGLLKALKSS*LQLSNL
Trigger: TAAATTTGAGAGCTGTAGCAAGGAGGACTTTAGAGC...TTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGGCTCTAAAGTCCTCCTaGCTACAGCTCTCAAATTTA +
Preference number: 5 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKALKSS*LQLSNL
Trigger: TAAATTTGAGAGCTGTAGCAAGGAGGACTTTAGAGC...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATACTTGTCATAATGGGCTaGCTTTCAGGTAAGGCACTA +
Preference number: 5 (lower is better)
Translates to: ADSRGLLKSYYKINHLHILVIMG*LSGKAL
Trigger: TAGTGCCTTACCTGAAAGCAAGCCCATTATGACAAG...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp AAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGAGTAGATGCAAGCTTTaGCTCAAATTCCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: KSISILKENPWISADSRGSRCKL*LKFPLL
Trigger: CAACAAGGGGAATTTGAGCAAAAGCTTGCATCTACT...CCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACAGTAGATGCAAGCTTTaGCTCAAATTCCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNSRCKL*LKFPLL
Trigger: CAACAAGGGGAATTTGAGCAAAAGCTTGCATCTACT...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp TATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGAGTAGATGCAAGCTTTaGCTCAAATTCCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: YPQRKSLDFCRQQRASQKSRCKL*LKFPLL
Trigger: CAACAAGGGGAATTTGAGCAAAAGCTTGCATCTACT...CTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CTGCTGTTTGAACTCTTGTTCAGCCAGCCACTGAAAATCCCAAAGTACAACACAGCATGTCTCATCTGTTaGTCTTTGGTTTTCAAGCAA +
Preference number: 5 (lower is better)
Translates to: LLFELLFSQPLKIPKYNTACLIC*SLVFKQ
Trigger: TTGCTTGAAAACCAAAGACAAACAGATGAGACATGC...TGTGTTGTACTTTGGGATTTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCATGGGGGAGGGTGGTaGGGATTCTATTCAAAGAGA +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIHGGGW*GFYSKR
Trigger: TCTCTTTGAATAGAATCCCAACCACCCTCCCCCATG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGAACACTTTCCAGCCCTaGAGATTGTCTCTACAACAA +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWNTFQP*RLSLQQ
Trigger: TTGTTGTAGAGACAATCTCAAGGGCTGGAAAGTGTT...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTAATGATTCCCTAAGTTaGGAAATTGAAGCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: HFYPQRKSLDFCRQQRASNDSLS*EIEALE
Trigger: TTCCAGCGCTTCAATTTCCAAACTTAGGGAATCATT...AGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp TTTGTGAATAAAGCACGTGCACACACACACAACAACACACATACATGCACACACTGGTGTTTCACTTCCTaGTCGAAAGTCTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: FVNKARAHTHNNTHTCTHWCFTS*SKVFNL
Trigger: CAAATTGAAGACTTTCGACAAGGAAGTGAAACACCA...GTGTGTGCATGTATGTGTGTTGTTGTGTGTGTGTGCACGTGCTTTATTCACAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CAACATTTTAAACTGTGTATCTTCCTGGGTAGTCTCCTTGAAGGCCTTGTCTCATGGTGTTTCACTTCCTaGTCGAAAGTCTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: QHFKLCIFLGSLLEGLVSWCFTS*SKVFNL
Trigger: CAAATTGAAGACTTTCGACAAGGAAGTGAAACACCA...TGAGACAAGGCCTTCAAGGAGACTACCCAGGAAGATACACAGTTTAAAATGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGTGGTGTTTCACTTCCTaGTCGAAAGTCTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: KSISILKENPWISADSRGWCFTS*SKVFNL
Trigger: CAAATTGAAGACTTTCGACAAGGAAGTGAAACACCA...CCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCAGGTGGGTAATTTGTaGCTTCTGCCGATCGATTAC +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIQVGNL*LLPIDY
Trigger: GTAATCGATCGGCAGAAGCAACAAATTACCCACCTG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGGCATCTTTCTACTTTTaGTTGCAAACTCTGAACGGT +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWASFYF*LQTLNG
Trigger: ACCGTTCAGAGTTTGCAACAAAAAGTAGAAAGATGC...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTCAAATAGTGGCCGTTaGGAAAGAACTGTCTGCTGC +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISNSGR*ERTVCC
Trigger: GCAGCAGACAGTTCTTTCCAAACGGCCACTATTTGA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTGCTGTTTGAACTCTaGTTCAGCCAGCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILLFEL*FSQPLK
Trigger: TTTCAGTGGCTGGCTGAACAAGAGTTCAAACAGCAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTAAGATAATGTGCCACTaGAAGTTGAATGATCTTCCA +
Preference number: 5 (lower is better)
Translates to: ILKENPWISADSRGLLKSKIMCH*KLNDLP
Trigger: TGGAAGATCATTCAACTTCAAGTGGCACATTATCTT...ACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATGATTCCCTAAGTTaGGAAATTGAAGCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: ADSRGLLKSYYKINHLHINDSLS*EIEALE
Trigger: TTCCAGCGCTTCAATTTCCAAACTTAGGGAATCATT...TATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAAATGATTCCCTAAGTTaGGAAATTGAAGCGCTGGAA +
Preference number: 5 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLNDSLS*EIEALE
Trigger: TTCCAGCGCTTCAATTTCCAAACTTAGGGAATCATT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GATATACAAGAGCATTTCTATCCTCAAAGAAAATCCTTGGATTTCTGCAGACAGCTTGTCATAATGGGCTaGCTTTCAGGTAAGGCACTA +
Preference number: 5 (lower is better)
Translates to: DIQEHFYPQRKSLDFCRQLVIMG*LSGKAL
Trigger: TAGTGCCTTACCTGAAAGCAAGCCCATTATGACAAG...CTGTCTGCAGAAATCCAAGGATTTTCTTTGAGGATAGAAATGCTCTTGTATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp GAAAATCCTTGGATTTCTGCAGACAGCAGAGGGCTTCTCAAAAGTTACTACAAATGGTGTTTCACTTCCTaGTCGAAAGTCTTCAATTTG +
Preference number: 5 (lower is better)
Translates to: ENPWISADSRGLLKSYYKWCFTS*SKVFNL
Trigger: CAAATTGAAGACTTTCGACAAGGAAGTGAAACACCA...TTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTCTGCAGAAATCCAAGGATTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGTCTTTCTACTTTTTGTaGCAAACTCTGAACGGTAGT +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWSFYFL*QTLNGS
Trigger: ACTACCGTTCAGAGTTTGCAACAAAAAGTAGAAAGA...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTCTTTCTACTTTTTGTaGCAAACTCTGAACGGTAGT +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNSFYFL*QTLNGS
Trigger: ACTACCGTTCAGAGTTTGCAACAAAAAGTAGAAAGA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp AAAGAGCATCACGTCAAAATTTCACACCTCTTGGGAAATCCACAATCACTCTGGCTCATCTGTTTGTCTTaGGTTTTCAAGCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: KEHHVKISHLLGNPQSLWLICLS*VFKQCF
Trigger: AAAGCATTGCTTGAAAACCAAAGACAAACAGATGAG...CCAGAGTGATTGTGGATTTCCCAAGAGGTGTGAAATTTTGACGTGATGCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACTGGATAAGTAAGCTATaGTTCCAGGGTAACTTTGTT +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNWISKL*FQGNFV
Trigger: AACAAAGTTACCCTGGAACAATAGCTTACTTATCCA...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GTCATGTCACTTGCAACCTTCCATTATGGCTCCATAACACAGCAGCATTTAAACCTAAGCAAACAAGTGTaGGATTCACAAAAAGCACAA +
Preference number: 5 (lower is better)
Translates to: VMSLATFHYGSITQQHLNLSKQV*DSQKAQ
Trigger: TTGTGCTTTTTGTGAATCCAACACTTGTTTGCTTAG...GTTTAAATGCTGCTGTGTTATGGAGCCATAATGGAAGGTTGCAAGTGACATGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTAATCTGTACAGGCAATTaGGGTCTTTCATTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLICTGN*GLSLSQ
Trigger: TTGACTCAATGAAAGACCCAAATTGCCTGTACAGAT...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS TCA 90 bp TACTACACAATGCTTTCAAGTCAAACAAACAACAGGACATTTCCTTaGACAGCTGATCAATCACAGTCAAATCAAATAGTGGCCGTTTGG +
Preference number: 5 (lower is better)
Translates to: YYTMLSSQTNNRTFP*TADQSQSNQIVAVW
Trigger: CCAAACGGCCACTATTTGATTTGACTGTGATTGATCAGCTGTTCAAGGAAATGTCCTGTTGTTTGTTTGACTTGAAAGCATTGTGTAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp GACAGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATATGTGCCACTTGAAGTaGAATGATCTTCCACGCTAT +
Preference number: 5 (lower is better)
Translates to: DSRGLLKSYYKINHLHINMCHLK*NDLPRY
Trigger: ATAGCGTGGAAGATCATTCAACTTCAAGTGGCACAT...ATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCTGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp AGCAGAGGGCTTCTCAAAAGTTACTACAAAATTAATCACCTCCACATAAATGTACCTCAAAGAAAATCCTaGGATTTCTGCAGACAGCAG +
Preference number: 5 (lower is better)
Translates to: SRGLLKSYYKINHLHINVPQRKS*DFCRQQ
Trigger: CTGCTGTCTGCAGAAATCCAAGGATTTTCTTTGAGG...TACATTTATGTGGAGGTGATTAATTTTGTAGTAACTTTTGAGAAGCCCTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360290.7
ENST00000392500.7
CDS-3UTR CAA 90 bp CAGGCAAAAAGGCACAAAAGGTTCTCTCTGTGTACAGCTGCAATAGTGTTATTATCTGTCAATCTCATCTaGTTGGCTGTCTATTATCTT +
Preference number: 5 (lower is better)
Translates to: QAKRHKRFSLCTAAIVLLSVNLI*LAVYYL
Trigger: AAGATAATAGACAGCCAACAAGATGAGATTGACAGA...TAATAACACTATTGCAGCTGTACACAGAGAGAACCTTTTGTGCCTTTTTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTCTCAAATTTATACTaGCAGTCCAGAGTTGATGAC +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILSNLY*QSRVDD
Trigger: GTCATCAACTCTGGACTGCAAGTATAAATTTGAGAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTAAATGAGACTTGGTaGCATCACAAGATCAAACCA +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILNETW*HHKIKP
Trigger: TGGTTTGATCTTGTGATGCAACCAAGTCTCATTTAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCATCTGTACAGGCAATTaGGGTCTTTCATTGAGTCAA +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIICTGN*GLSLSQ
Trigger: TTGACTCAATGAAAGACCCAAATTGCCTGTACAGAT...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTCTGTCAATCTCATCTaGTTGGCTGTCTATTATCTT +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSISVNLI*LAVYYL
Trigger: AAGATAATAGACAGCCAACAAGATGAGATTGACAGA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCCTCATCTGTTTGTCTTaGGTTTTCAAGCAATGCTTT +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSILICLS*VFKQCF
Trigger: AAAGCATTGCTTGAAAACCAAAGACAAACAGATGAG...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS-3UTR CAA 90 bp ATCTACTGTTTATGTAGGCCCCTTTACAAACTCCAGATTTTAAGAGGATCAATCTGGATAAGTAAGCTATaGTTCCAGGGTAACTTTGTT +
Preference number: 5 (lower is better)
Translates to: IYCLCRPLYKLQILRGSIWISKL*FQGNFV
Trigger: AACAAAGTTACCCTGGAACAATAGCTTACTTATCCA...GATTGATCCTCTTAAAATCTGGAGTTTGTAAAGGGGCCTACATAAACAGTAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS CCA 72 bp GGAAGCTGCGGGCTCCGCCGGGGCTATCCCGGCCGCTaGCCTCCGGAGCCAGGAAGCGCCCCCACATCGCGG +
Preference number: 6 (lower is better)
Translates to: GSCGLRRGYPGR*PPEPGSAPTSR
Trigger: CCGCGATGTGGGGGCGCTTCCTGGCTCCGGAGGCCAGCGGCCGGGATAGCCCCGGCGGAGCCCGCAGCTTCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 72 bp AGGAAGCGCCCCCACATCGCGGGCGAGAGGGCCGGGTaGGCCAGGGACGCCCGACTCCTCACGTCCGTCCTC +
Preference number: 6 (lower is better)
Translates to: RKRPHIAGERAG*ARDARLLTSVL
Trigger: GAGGACGGACGTGAGGAGTCGGGCGTCCCTGGCCCACCCGGCCCTCTCGCCCGCGATGTGGGGGCGCTTCCT
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS GCA 72 bp CACGTCCGTCCTCCTGCTTCTTCGGCGGCGGAAACTTaGGCGGAGCGTGGGCCTCGGCGACACGGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: HVRPPASSAAET*AERGPRRHGQE
Trigger: CTCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGAGGACGGACGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CAA 90 bp CCCGACTCCTCACGTCCGTCCTCCTGCTTCTTCGGCGGCGGAAACTaGCGCGGAGCGTGGGCCTCGGCGACACGGGCAGGAGGAAAGGCG +
Preference number: 6 (lower is better)
Translates to: PDSSRPSSCFFGGGN*RGAWASATRAGGKA
Trigger: CGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGAGGACGGACGTGAGGAGTCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS GCA 72 bp GAGCCCAGGCTCAAAGGCTCCAGGCGAAGTTGCAGCTaGGGGTTCTCTCCGCCCCCTCCGCCGGCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: EPRLKGSRRSCS*GFSPPPPPAEP
Trigger: TGGCTCTGCCGGCGGAGGGGGCGGAGAGAACCCGCAGCTGCAACTTCGCCTGGAGCCTTTGAGCCTGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000419517.2
CDS CCA 72 bp CCTCGGCGACACGGGCAGGAGGAAAGGCGGGATGGCTaGTTAACGGCTGCTCAGCTACGGGCGGGGAGCGCA +
Preference number: 6 (lower is better)
Translates to: PRRHGQEERRDG*LTAAQLRAGSA
Trigger: TGCGCTCCCCGCCCGTAGCTGAGCAGCCGTTAACCAGCCATCCCGCCTTTCCTCCTGCCCGTGTCGCCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 72 bp TGGGCCTCGGCGACACGGGCAGGAGGAAAGGCGGGATaGCTGGTTAACGGCTGCTCAGCTACGGGCGGGGAG +
Preference number: 6 (lower is better)
Translates to: WASATRAGGKAG*LVNGCSATGGE
Trigger: CTCCCCGCCCGTAGCTGAGCAGCCGTTAACCAGCCATCCCGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CCA 72 bp TCCTGCTTCTTCGGCGGCGGAAACTTGCGCGGAGCGTaGGCCTCGGCGACACGGGCAGGAGGAAAGGCGGGA +
Preference number: 6 (lower is better)
Translates to: SCFFGGGNLRGA*ASATRAGGKAG
Trigger: TCCCGCCTTTCCTCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CAA 72 bp TCACGTCCGTCCTCCTGCTTCTTCGGCGGCGGAAACTaGCGCGGAGCGTGGGCCTCGGCGACACGGGCAGGA +
Preference number: 6 (lower is better)
Translates to: SRPSSCFFGGGN*RGAWASATRAG
Trigger: TCCTGCCCGTGTCGCCGAGGCCCACGCTCCGCGCAAGTTTCCGCCGCCGAAGAAGCAGGAGGACGGACGTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368491.8
ENST00000419517.2
CDS CAA 72 bp CCGCATCCCTCTGTCTCCATCCTCCCGCCCTGCGAGTaGAGTAGAGGGCAGCGACTTGGCCTATTTTGCGAT +
Preference number: 6 (lower is better)
Translates to: PHPSVSILPPCE*SRGQRLGLFCD
Trigger: ATCGCAAAATAGGCCAAGTCGCTGCCCTCTACTCAACTCGCAGGGCGGGAGGATGGAGACAGAGGGATGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419517.2
CDS TCA 72 bp CGCATCCCTCTGTCTCCATCCTCCCGCCCTGCGAGTTaGGTAGAGGGCAGCGACTTGGCCTATTTTGCGATA +
Preference number: 6 (lower is better)
Translates to: RIPLSPSSRPAS*VEGSDLAYFAI
Trigger: TATCGCAAAATAGGCCAAGTCGCTGCCCTCTACTCAACTCGCAGGGCGGGAGGATGGAGACAGAGGGATGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419517.2
CDS TCA 72 bp CCCTACTCCATGCTTTTCCCAGATATCCCCAGCCAGTaGCAAAGCTCAGCCGAGATACTTGGGCCTGGCCAT +
Preference number: 6 (lower is better)
Translates to: PYSMLFPDIPSQ*QSSAEILGPGH
Trigger: ATGGCCAGGCCCAAGTATCTCGGCTGAGCTTTGTCACTGGCTGGGGATATCTGGGAAAAGCATGGAGTAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489276.1
CDS CAA 72 bp GTGCCACCCTGGCCACAGTTATCCGGGGCAGTGAGTTaGGATAAAGATGACCATTTCCGAAGTGGCCGGAAG +
Preference number: 6 (lower is better)
Translates to: VPPWPQLSGAVS*DKDDHFRSGRK
Trigger: CTTCCGGCCACTTCGGAAATGGTCATCTTTATCCAAACTCACTGCCCCGGATAACTGTGGCCAGGGTGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS GCA 72 bp GGAAGGGGAGATCTGTCAGGCTGGGGTCTTCAGGAATaGTTCACGAAGGAGGGACTATCAGTGGACTTCAGT +
Preference number: 6 (lower is better)
Translates to: GRGDLSGWGLQE*FTKEGLSVDFS
Trigger: ACTGAAGTCCACTGATAGTCCCTCCTTCGTGAAGCATTCCTGAAGACCCCAGCCTGACAGATCTCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392500.7
ENST00000489276.1
CDS CAA 72 bp ATATCCCCAGCCAGTGACAAAGCTCAGCCGAGATACTaGGGCCTGGCCATTCTTTGCAATGCAGAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: ISPASDKAQPRY*GLAILCNAEPF
Trigger: GAAGGGCTCTGCATTGCAAAGAATGGCCAGGCCCAAGTATCTCGGCTGAGCTTTGTCACTGGCTGGGGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489276.1
CDS CAA 90 bp CTGCATACAGTGCCACCCTGGCCACAGTTATCCGGGGCAGTGAGTTaGGATAAAGATGACCATTTCCGAAGTGGCCGGAAGTCCTTCATG +
Preference number: 6 (lower is better)
Translates to: LHTVPPWPQLSGAVS*DKDDHFRSGRKSFM
Trigger: CATGAAGGACTTCCGGCCACTTCGGAAATGGTCATCTTTATCCAAACTCACTGCCCCGGATAACTGTGGCCAGGGTGGCACTGTATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS TCA 72 bp ATACAGTGCCACCCTGGCCACAGTTATCCGGGGCAGTaGGTTTGGATAAAGATGACCATTTCCGAAGTGGCC +
Preference number: 6 (lower is better)
Translates to: IQCHPGHSYPGQ*VWIKMTISEVA
Trigger: GGCCACTTCGGAAATGGTCATCTTTATCCAAACTCACTGCCCCGGATAACTGTGGCCAGGGTGGCACTGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS CAA 72 bp CAAAGCTCAGCCGAGATACTTGGGCCTGGCCATTCTTaGCAATGCAGAGCCCTTCTAATCATCAGTCCTTGT +
Preference number: 6 (lower is better)
Translates to: QSSAEILGPGHS*QCRALLIISPC
Trigger: ACAAGGACTGATGATTAGAAGGGCTCTGCATTGCAAAGAATGGCCAGGCCCAAGTATCTCGGCTGAGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489276.1
CDS GCA 72 bp TCAGCCGAGATACTTGGGCCTGGCCATTCTTTGCAATaGAGAGCCCTTCTAATCATCAGTCCTTGTTCTCTA +
Preference number: 6 (lower is better)
Translates to: SAEILGPGHSLQ*RALLIISPCSL
Trigger: TAGAGAACAAGGACTGATGATTAGAAGGGCTCTGCATTGCAAAGAATGGCCAGGCCCAAGTATCTCGGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489276.1
CDS TCA 72 bp ACTGTCTGCTGCCTAGATTGGTCAGGTTCCTGGCCCTaGTCCAATAAAGAGCATGTCTCATCTGTTTGTCTT +
Preference number: 6 (lower is better)
Translates to: TVCCLDWSGSWP*SNKEHVSSVCL
Trigger: AAGACAAACAGATGAGACATGCTCTTTATTGGATCAGGGCCAGGAACCTGACCAATCTAGGCAGCAGACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS CAA 90 bp ACAGGCTGTCTCCTAAGAGTAGAGGAAGAGGCTCTAAAGTCCTCCTaGCTACAGCTCTCAAATTTATACTTGCAGTCCAGAGTTGATGAC +
Preference number: 6 (lower is better)
Translates to: TGCLLRVEEEALKSS*LQLSNLYLQSRVDD
Trigger: GTCATCAACTCTGGACTGCAAGTATAAATTTGAGAGCTGTAGCAAGGAGGACTTTAGAGCCTCTTCCTCTACTCTTAGGAGACAGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS CAA 90 bp CTTGTACTCCATTTTGAGCCATCTGGTGTCAATGATTCCCTAAGTTaGGAAATTGAAGCGCTGGAATTAGACGGCATCACATGGGCAGTA +
Preference number: 6 (lower is better)
Translates to: LVLHFEPSGVNDSLS*EIEALELDGITWAV
Trigger: TACTGCCCATGTGATGCCGTCTAATTCCAGCGCTTCAATTTCCAAACTTAGGGAATCATTGACACCAGATGGCTCAAAATGGAGTACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000462101.1
ENST00000472713.1
ENST00000476150.5
ENST00000483035.5
CDS GCA 72 bp CATAACATCCACTGGAGGGAAGCAAACACTAGATTTTaGACCTTACCTGCATTGGTGTTTCACTTCCTTGTC +
Preference number: 6 (lower is better)
Translates to: HNIHWREANTRF*TLPALVFHFLV
Trigger: GACAAGGAAGTGAAACACCAATGCAGGTAAGGTGCAAAATCTAGTGTTTGCTTCCCTCCAGTGGATGTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483035.5
CDS CAA 72 bp CTCCTAAGAGTAGAGGAAGAGGCTCTAAAGTCCTCCTaGCTACAGCTCTCAAATTTATACTTGCAGTCCAGA +
Preference number: 6 (lower is better)
Translates to: LLRVEEEALKSS*LQLSNLYLQSR
Trigger: TCTGGACTGCAAGTATAAATTTGAGAGCTGTAGCAAGGAGGACTTTAGAGCCTCTTCCTCTACTCTTAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS CAA 72 bp GGAGGTTCAAAAGCCTCTGAGCTTGTCATAATGGGCTaGCTTTCAGGTAAGGCACTATATGTCATGTCTACA +
Preference number: 6 (lower is better)
Translates to: GGSKASELVIMG*LSGKALYVMST
Trigger: TGTAGACATGACATATAGTGCCTTACCTGAAAGCAAGCCCATTATGACAAGCTCAGAGGCTTTTGAACCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS CAA 72 bp GCAGCTGTAGACTCTGACTCTGTACATCATCTAGAGTaGGAAGATCAGCCAGATACTTTTCCAAGGTCTCAA +
Preference number: 6 (lower is better)
Translates to: AAVDSDSVHHLE*EDQPDTFPRSQ
Trigger: TTGAGACCTTGGAAAAGTATCTGGCTGATCTTCCAACTCTAGATGATGTACAGAGTCAGAGTCTACAGCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368488.9
ENST00000368491.8
ENST00000434604.5
CDS CAA 72 bp GATTTTGCACCTTACCTGCATTGGTGTTTCACTTCCTaGTCGAAAGTCTTCAATTTGCTGCTGTTGCCAAGG +
Preference number: 6 (lower is better)
Translates to: DFAPYLHWCFTS*SKVFNLLLLPR
Trigger: CCTTGGCAACAGCAGCAAATTGAAGACTTTCGACAAGGAAGTGAAACACCAATGCAGGTAAGGTGCAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483035.5
CDS CAA 90 bp CCAGAATCTGCAGCTGTAGACTCTGACTCTGTACATCATCTAGAGTaGGAAGATCAGCCAGATACTTTTCCAAGGTCTCAATTCTTCTCT +
Preference number: 6 (lower is better)
Translates to: PESAAVDSDSVHHLE*EDQPDTFPRSQFFS
Trigger: AGAGAAGAATTGAGACCTTGGAAAAGTATCTGGCTGATCTTCCAACTCTAGATGATGTACAGAGTCAGAGTCTACAGCTGCAGATTCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368488.9
ENST00000368491.8
ENST00000434604.5
CDS CAA 90 bp ATCCACTGGAGGGAAGCAAACACTAGATTTTGCACCTTACCTGCATaGGTGTTTCACTTCCTTGTCGAAAGTCTTCAATTTGCTGCTGTT +
Preference number: 6 (lower is better)
Translates to: IHWREANTRFCTLPA*VFHFLVESLQFAAV
Trigger: AACAGCAGCAAATTGAAGACTTTCGACAAGGAAGTGAAACACCAATGCAGGTAAGGTGCAAAATCTAGTGTTTGCTTCCCTCCAGTGGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483035.5
CDS CCA 72 bp GAAGCTATACTGTGTCTCCTGATATGGTTATTTCGATaGTTAGATGGAACAGTTGTGGCCTGCCACAATGAT +
Preference number: 6 (lower is better)
Translates to: EAILCLLIWLFR*LDGTVVACHND
Trigger: ATCATTGTGGCAGGCCACAACTGTTCCATCTAACCATCGAAATAACCATATCAGGAGACACAGTATAGCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000462101.1
ENST00000476150.5
ENST00000483035.5
CDS CAA 72 bp CATTTTGAGCCATCTGGTGTCAATGATTCCCTAAGTTaGGAAATTGAAGCGCTGGAATTAGACGGCATCACA +
Preference number: 6 (lower is better)
Translates to: HFEPSGVNDSLS*EIEALELDGIT
Trigger: TGTGATGCCGTCTAATTCCAGCGCTTCAATTTCCAAACTTAGGGAATCATTGACACCAGATGGCTCAAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000462101.1
ENST00000472713.1
ENST00000476150.5
ENST00000483035.5
CDS CAA 90 bp AAATATTTTGGAGGTTCAAAAGCCTCTGAGCTTGTCATAATGGGCTaGCTTTCAGGTAAGGCACTATATGTCATGTCTACAGGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: KYFGGSKASELVIMG*LSGKALYVMSTGCL
Trigger: GAGACAGCCTGTAGACATGACATATAGTGCCTTACCTGAAAGCAAGCCCATTATGACAAGCTCAGAGGCTTTTGAACCTCCAAAATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
ENST00000472713.1
ENST00000483035.5
CDS CCA 72 bp GGGAAGCAAACACTAGATTTTGCACCTTACCTGCATTaGTGTTTCACTTCCTTGTCGAAAGTCTTCAATTTG +
Preference number: 6 (lower is better)
Translates to: GKQTLDFAPYLH*CFTSLSKVFNL
Trigger: CAAATTGAAGACTTTCGACAAGGAAGTGAAACACCAATGCAGGTAAGGTGCAAAATCTAGTGTTTGCTTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000483035.5
CDS CAA 72 bp TTCATTATCCCTTATCCTCTCATGCAGGTGGGTAATTaGTTGCTTCTGCCGATCGATTACAATTTCTTTCTG +
Preference number: 6 (lower is better)
Translates to: FIIPYPLMQVGN*LLLPIDYNFFL
Trigger: CAGAAAGAAATTGTAATCGATCGGCAGAAGCAACAAATTACCCACCTGCATGAGAGGATAAGGGATAATGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000360290.7
ENST00000368488.9
ENST00000368491.8
ENST00000392500.7
ENST00000419517.2
ENST00000434604.5
CDS CCA 72 bp ATTGTAGTCCTTAATTCATCAATGTCTCTTCGTAACTaGCACACATCTGACAGCTTTTTAGTGAGTGTTTCT +
Preference number: 6 (lower is better)
Translates to: IVVLNSSMSLRN*HTSDSFLVSVS
Trigger: AGAAACACTCACTAAAAAGCTGTCAGATGTGTGCCAGTTACGAAGAGACATTGATGAATTAAGGACTACAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8
CDS CAA 72 bp TTGTTGGCTGTCTATTATCTTACTAGCAGTCTCATTTaGTTGTCTGAGATTATCATTTTCATTCTGAAGCTG +
Preference number: 6 (lower is better)
Translates to: LLAVYYLTSSLI*LSEIIIFILKL
Trigger: CAGCTTCAGAATGAAAATGATAATCTCAGACAACAAAATGAGACTGCTAGTAAGATAATAGACAGCCAACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368488.9
ENST00000368491.8