RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP78 (Homo sapiens)

Ensembl gene IDs: ENSG00000148019

Ensembl transcript IDs: ENST00000277082.9, ENST00000376597.9, ENST00000376598.3, ENST00000415759.6, ENST00000424347.6, ENST00000459817.2, ENST00000476652.2, ENST00000487108.6, ENST00000536374.1, ENST00000642214.1, ENST00000642654.1, ENST00000642669.1, ENST00000643273.2, ENST00000643347.1, ENST00000643499.1, ENST00000643847.1, ENST00000644208.1, ENST00000645398.1, ENST00000645865.1, ENST00000646288.1, ENST00000647130.1, ENST00000647199.1

Found 1218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGCAGTACGCCACGGCAAGAAACCAGACACACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTTACCAAGGGAGTGTTTTCTGCCACT +
Preference number: 1 (lower is better)
Translates to: CSTPRQETRHTRWKR*GRIIFFTKGVFSAT
Trigger: AGTGGCAGAAAACACTCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGGCGTACTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR CCA 90 bp TGCACGTTCTGCAGTACGCCACGGCAAGAAACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATAATATTCTTTACCAAGGGAGTGTTT +
Preference number: 1 (lower is better)
Translates to: CTFCSTPRQETRHTR*KRCGRIIFFTKGVF
Trigger: AAACACTCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGGCGTACTGCAGAACGTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR TCA 90 bp TATTGGTTTCAAGGGCCTCTAGCAAAGCCTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATAAATCCT +
Preference number: 1 (lower is better)
Translates to: YWFQGPLAKPLLLHW*GRTVAGQELSAINP
Trigger: AGGATTTATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGCTTTGCTAGAGGCCCTTGAAACCAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR CCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCT +
Preference number: 1 (lower is better)
Translates to: LGSELPLQIAAFLAW*QTPESDAPKMSGMA
Trigger: AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR GCA 90 bp GGAGAACACATTCTAGCAATGAATCCTTCAAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAG +
Preference number: 1 (lower is better)
Translates to: GEHILAMNPSKDSCR*SVAGTPRLLLEVPK
Trigger: CTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGGATTCATTGCTAGAATGTGTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
3UTR GCA 90 bp GGTGAAGGAGAACACATTCTAGCAATGAATCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTT +
Preference number: 1 (lower is better)
Translates to: GEGEHILAMNPSKDS*RCSVAGTPRLLLEV
Trigger: AACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGGATTCATTGCTAGAATGTGTTCTCCTTCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
3UTR CCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTG +
Preference number: 1 (lower is better)
Translates to: EPFWIIPLFSDPSIS*VRAPTSDSCFLSLV
Trigger: CACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 90 bp TTGCTTCCCTCTCTTCTCATGGCAAATGGCAATTCTGCACTTCCCTaGTCTGCTGAACTCAGGCATAACCATGTGACTTTCTTTGGCCAA +
Preference number: 1 (lower is better)
Translates to: LLPSLLMANGNSALP*SAELRHNHVTFFGQ
Trigger: TTGGCCAAAGAAAGTCACATGGTTATGCCTGAGTTCAGCAGACCAGGGAAGTGCAGAATTGCCATTTGCCATGAGAAGAGAGGGAAGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR TCA 90 bp AACAGGTTTGGAAGTCAACAAATCCTGCTTTTGCCTTGTGCTACTTaGAGCCCTCAACCAAGTGAATCAATACCTCTCAGGCCTCATTCC +
Preference number: 1 (lower is better)
Translates to: NRFGSQQILLLPCAT*SPQPSESIPLRPHS
Trigger: GGAATGAGGCCTGAGAGGTATTGATTCACTTGGTTGAGGGCTTCAAGTAGCACAAGGCAAAAGCAGGATTTGTTGACTTCCAAACCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGA +
Preference number: 1 (lower is better)
Translates to: RSCGQLNFSSSSEPF*IIPLFSDPSISWVR
Trigger: TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 90 bp TATGATGTTGAGATTCATCCGAATTGTGGCATGTTTGCCACCATATaGATACATCGCTATCCATTCACCTGTTGGAAGACATCTTGGTCA +
Preference number: 1 (lower is better)
Translates to: YDVEIHPNCGMFATI*IHRYPFTCWKTSWS
Trigger: TGACCAAGATGTCTTCCAACAGGTGAATGGATAGCGATGTATCCATATGGTGGCAAACATGCCACAATTCGGATGAATCTCAACATCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 90 bp CACACTGTCAAACTGTCCATCCAAAAGCTGTATCAATTTCTACAATaGCTGAGAATACTCCTTTCCTCACATTATCTCCAGCACTATCAC +
Preference number: 1 (lower is better)
Translates to: HTVKLSIQKLYQFLQ*LRILLSSHYLQHYH
Trigger: GTGATAGTGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATACAGCTTTTGGATGGACAGTTTGACAGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR GCA 90 bp ATAAGACAATATCTAGGACAAGCTTTCACTTTCTGTGTCCTGCCATaGCTCCATTCATGTTCAAACCTAGAACTTTGGTTGGACTTTGTT +
Preference number: 1 (lower is better)
Translates to: IRQYLGQAFTFCVLP*LHSCSNLELWLDFV
Trigger: AACAAAGTCCAACCAAAGTTCTAGGTTTGAACATGAATGGAGGCATGGCAGGACACAGAAAGTGAAAGCTTGTCCTAGATATTGTCTTAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR CCA 90 bp AGCACACTTGATATACTTAAACAGCCTTTAAGAGCTTTACACAACTaGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTG +
Preference number: 1 (lower is better)
Translates to: STLDILKQPLRALHN*KVTSLYLIAGTRLL
Trigger: CAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTTGTGTAAAGCTCTTAAAGGCTGTTTAAGTATATCAAGTGTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR TCA 90 bp TATGGTATGTGTATGTTAGCATTTAAAGAATCTGCCAAACTGTTTTaGGTGACTGAGTCATTTTGCATTCCTACCAGCTGTGAGGAACTC +
Preference number: 1 (lower is better)
Translates to: YGMCMLAFKESAKLF*VTESFCIPTSCEEL
Trigger: GAGTTCCTCACAGCTGGTAGGAATGCAAAATGACTCAGTCACTCAAAACAGTTTGGCAGATTCTTTAAATGCTAACATACACATACCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 90 bp CTGTCAAACTGTCCATCCAAAAGCTGTATCAATTTCTACAATGACTaGGAATACTCCTTTCCTCACATTATCTCCAGCACTATCACCAAT +
Preference number: 1 (lower is better)
Translates to: LSNCPSKSCINFYND*EYSFPHIISSTITN
Trigger: ATTGGTGATAGTGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATACAGCTTTTGGATGGACAGTTTGACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 90 bp TCCTGTAATGCTTCTTGTTCTATACTAGTTTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGAT +
Preference number: 1 (lower is better)
Translates to: SCNASCSILVFSGTS*TLSEESSTSSTSED
Trigger: ATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAAAACTAGTATAGAACAAGAAGCATTACAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR GCA 90 bp ATTTCTAAACCTCCATCTCCAATTGGACAATTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTATTCAATCCCTTTGCTAGAATAGTT +
Preference number: 1 (lower is better)
Translates to: ISKPPSPIGQFARDR*TKEADLFNPFARIV
Trigger: AACTATTCTAGCAAAGGGATTGAATAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAGATGGAGGTTTAGAAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR CCA 90 bp GAATGCCATATAAATGGAATCATACAGAATGTAGCCTTCCGAGACTaGCTTTTTCACTCAGCATATGATGTTGAGATTCATCCGAATTGT +
Preference number: 1 (lower is better)
Translates to: ECHINGIIQNVAFRD*LFHSAYDVEIHPNC
Trigger: ACAATTCGGATGAATCTCAACATCATATGCTGAGTGAAAAAGCCAGTCTCGGAAGGCTACATTCTGTATGATTCCATTTATATGGCATTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 90 bp AAAACACTTCACACAGTCTTGTATCTGACTCTTTGGGCACTTGTGTaGATATTTCTTCAGGCTGGATGCCTAAAATTAGTCATTAGATCA +
Preference number: 1 (lower is better)
Translates to: KTLHTVLYLTLWALV*IFLQAGCLKLVIRS
Trigger: TGATCTAATGACTAATTTTAGGCATCCAGCCTGAAGAAATATTCACACAAGTGCCCAAAGAGTCAGATACAAGACTGTGTGAAGTGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 90 bp ACCTGTGATTATTCCTGTGTGAACAGCACATTTACCCTAACTCCATaGATTGTTTTGAGATGTAATCAAAATTGCTTTATGCCTGATGAC +
Preference number: 1 (lower is better)
Translates to: TCDYSCVNSTFTLTP*IVLRCNQNCFMPDD
Trigger: GTCATCAGGCATAAAGCAATTTTGATTACATCTCAAAACAATCCATGGAGTTAGGGTAAATGTGCTGTTCACACAGGAATAATCACAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR GCA 90 bp GCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 2 (lower is better)
Translates to: AGTPRLLLEVPKPSGVETVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...AGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR CAA 90 bp TCAAAAGACTCCTGCCGCTGCTCAGTAGCTGGGACTCCTAGGTTGTaGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGA +
Preference number: 2 (lower is better)
Translates to: SKDSCRCSVAGTPRL*LEVPKPSGVETGTG
Trigger: TCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
3UTR-3UTR TCA 90 bp GTTCTGCAGTACGCCACGGCAAGAAACCAGACACACCAGGTGGAAGAGGTGCGGTGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 2 (lower is better)
Translates to: VLQYATARNQTHQVEEVRCLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...CCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGGCGTACTGCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp ACCAGACACACCAGGTGGAAGAGGTGCGGGCGCATAATATTCTTTACCAAGGGATTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: TRHTRWKRCGRIIFFTKGLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...TCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACACTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAACGGTTGCAGTGAGCTaGGATCGAGGAGGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTTVAVS*DRGGCS
Trigger: ACTGCAACCTCCTCGATCTCAGCTCACTGCAACCGT...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
3UTR-3UTR TCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGGTGGGAGGATCATTTaGGGCCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKGGRII*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAATGATCCTCCCACC...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
3UTR-3UTR TCA 90 bp TTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGAGTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: LLLEVPKPSGVETGTGKELLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...CTCCTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp CTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCTACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 2 (lower is better)
Translates to: LQRMKDSLLSQSQENLVATRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...AGCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp TTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGAGGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 2 (lower is better)
Translates to: LLLEVPKPSGVETGTGKEAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...CTCCTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp CAGGACAGTCAGATCAGGAATGCAGGTCCTTTCCAGGGTGTTGCTTATCAGAGTGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 2 (lower is better)
Translates to: QDSQIRNAGPFQGVAYQSAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...ACTCTGATAAGCAACACCCTGGAAAGGACCTGCATTCCTGATCTGACTGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646288.1
3UTR-3UTR CCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 2 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR CAA 90 bp GTTGTATTGGTTTCAAGGGCCTCTAGCAAAGCCTTTGCTCCTTCATaGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATAAA +
Preference number: 2 (lower is better)
Translates to: VVLVSRASSKAFAPS*VRPHCCRSRALSHK
Trigger: TTTATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGCTTTGCTAGAGGCCCTTGAAACCAATACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAACGGTTGCAGTGAGCTaGGATCGAGGAGGTTGCAGT +
Preference number: 2 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKTVAVS*DRGGCS
Trigger: ACTGCAACCTCCTCGATCTCAGCTCACTGCAACCGT...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR TCA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTACTCCTCATCTCAGGTaGTCCGCCCACCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCTPHLR*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACCTGAGATGAGGAGT...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR TCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 2 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTSFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR GCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 2 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGGTGGGAGGATCATTTaGGGCCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAGGRII*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAATGATCCTCCCACC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR TCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATTGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 2 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHCLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTTGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 2 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 2 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR TCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp TTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 2 (lower is better)
Translates to: FAPSLVRPHCCRSRALSHSNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...ATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 2 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 2 (lower is better)
Translates to: SELPLQIAAFLAWWQTPESFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp ACCAGACACACCAGGTGGAAGAGGTGCGGGCGCATAATATTCTTTACCAAGGGAACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: TRHTRWKRCGRIIFFTKGTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...TCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTAGAGCAGTGGTGGCATaGTCACAGCTCACTGCAGCC +
Preference number: 2 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCRAVVA*SQLTAA
Trigger: GGCTGCAGTGAGCTGTGATCATGCCACCACTGCTCT...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR GCA 90 bp TCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTATTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 2 (lower is better)
Translates to: SVAGTPRLLLEVPKPSGVFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...TACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 2 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCTCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: LQRMKDSLLSQSQENLVARPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...AGCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp TTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGAGACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: LLLEVPKPSGVETGTGKETGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...CTCCTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 2 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACATGCAGGTCACAAAGCTaGAGTAGTTTGTCTCATATC +
Preference number: 2 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTCRSQS*SSLSHI
Trigger: GATATGAGACAAACTACTTCAGCTTTGTGACCTGCA...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
3UTR-3UTR TCA 90 bp CCTTCACTGATGGAGAAGTTATCCACTGGTACTCTGATTTGGCACTCCTTCCATGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: PSLMEKLSTGTLIWHSFHAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...ATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCCATCAGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 2 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: LFGAILDNSLILRSQHFLPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTTCACTTTCTGTGTCCTaGCATGCCTCCATTCATGTT +
Preference number: 2 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTSLSVS*HASIHV
Trigger: AACATGAATGGAGGCATGGCAGGACACAGAAAGTGA...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTTTCCTTGGACACTaGAACCAGCAATGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: SELPLQIAAFLAWWQTPESFLGH*NQQCSK
Trigger: TTTGGAACATTGCTGGTTGCAGTGTCCAAGGAAAGA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR GCA 90 bp TCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTCATGGTCTGTTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 2 (lower is better)
Translates to: SPIAKTLSPGFFMPSHGLFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...CAGACCATGAGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGCTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 2 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKLSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp AAGATCAGGTCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 2 (lower is better)
Translates to: KIRSPIAKTLSPGFFMPSAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...AGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGACCTGATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 2 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 2 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTSSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 2 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHSSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTCTAAACATCTTTCATaGGGCTGGGCACAGTGGCTC +
Preference number: 2 (lower is better)
Translates to: PFWIIPLFSDPSISWVRASKHLS*GWAQWL
Trigger: GAGCCACTGTGCCCAGCCCCATGAAAGATGTTTAGA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR CCA 90 bp TTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 2 (lower is better)
Translates to: FAPSLVRPHCCRSRALSHLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...ATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp CAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: QALHEHSLKNHQPLQLQRGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...CCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp CAGGACAGTCAGATCAGGAATGCAGGTCCTTTCCAGGGTGTTGCTTATCAGAGTTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 2 (lower is better)
Translates to: QDSQIRNAGPFQGVAYQSFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...ACTCTGATAAGCAACACCCTGGAAAGGACCTGCATTCCTGATCTGACTGTCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646288.1
3UTR-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTTCCTTCATTGTAAGCTaGCTGCATACAAATAGAAAC +
Preference number: 2 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTSFIVS*LHTNRN
Trigger: GTTTCTATTTGTATGCAGTCAGCTTACAATGAAGGA...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
3UTR-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: SELPLQIAAFLAWWQTPENSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAACTGCCAAAGGCAAACTaGATGGGCACAAATAAACCT +
Preference number: 2 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKLPKAN*MGTNKP
Trigger: AGGTTTATTTGTGCCCATGCAGTTTGCCTTTGGCAG...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR GCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 2 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR GCA 90 bp GAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 2 (lower is better)
Translates to: EHSLKNHQPLQLQRMKDSTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...AGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp TCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 2 (lower is better)
Translates to: SVAGTPRLLLEVPKPSGVEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...TACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 2 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACAGAAAGAACCCATCTTaGCCGGATGCAGTGGCTCAT +
Preference number: 2 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHRKNPS*PDAVAH
Trigger: ATGAGCCACTGCATCCGGCCAAGATGGGTTCTTTCT...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTGCTAACCGTATGGAATaGATTAGGGAGCCTTACATC +
Preference number: 2 (lower is better)
Translates to: HKEGGARTTTFNFAESFIANRME*IREPYI
Trigger: GATGTAAGGCTCCCTAATTCATTCCATACGGTTAGC...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR TCA 90 bp GAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 2 (lower is better)
Translates to: EHSLKNHQPLQLQRMKDSAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...AGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp TCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 2 (lower is better)
Translates to: SEESSTSSTSEDEGLSTVGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...GACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGTAGCTTTTCCTTTGTaGCCACTTCCTAGAATTATA +
Preference number: 2 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTVAFPL*PLPRII
Trigger: TATAATTCTAGGAAGTGGTCACAAAGGAAAAGCTAC...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 2 (lower is better)
Translates to: SRNWDRKGVERQRNSSITFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 2 (lower is better)
Translates to: LFGAILDNSLILRSQHFLAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 2 (lower is better)
Translates to: FLFGAILDNSLILRSQHFAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 2 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCACATCTTTCATGGGGCTaGGCACAGTGGCTCAGGTCT +
Preference number: 2 (lower is better)
Translates to: VSISTMTENTPFLTLSPAHLSWG*AQWLRS
Trigger: AGACCTGAGCCACTGTGCCCAGCCCCATGAAAGATG...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTGTAGCCTTCCGAGACTaGCTTTTTCACTCAGCATAT +
Preference number: 2 (lower is better)
Translates to: HKEGGARTTTFNFAESFIVAFRD*LFHSAY
Trigger: ATATGCTGAGTGAAAAAGCCAGTCTCGGAAGGCTAC...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp AAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCACAGCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 2 (lower is better)
Translates to: KNHQPLQLQRMKDSLLSQRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...CTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTTATTTAGACTTTTTCTaGCTACAGGCACCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: HKEGGARTTTFNFAESFIYLDFF*LQAPLV
Trigger: CACCAGAGGTGCCTGTAGTCAGAAAAAGTCTAAATA...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR GCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAACAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTG +
Preference number: 2 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKQMNPF*CVVHLL
Trigger: CAGAAGATGGACTACACAGCAGAATGGATTCATTTG...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTCTTTCCTTGGACACTaGAACCAGCAATGTTCCAAA +
Preference number: 2 (lower is better)
Translates to: PFWIIPLFSDPSISWVRASFLGH*NQQCSK
Trigger: TTTGGAACATTGCTGGTTGCAGTGTCCAAGGAAAGA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR GCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTGACTCTTTTCTAGGGTaGACACACGCATATATGCTA +
Preference number: 2 (lower is better)
Translates to: HKEGGARTTTFNFAESFIDSFLG*THAYML
Trigger: TAGCATATATGCGTGTGTGCACCCTAGAAAAGAGTC...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR GCA 90 bp AAATCCTCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTTTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 2 (lower is better)
Translates to: KSSLRESAKAHAPRSPISFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...ACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 2 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: RAPTSDSCFLSLVANSRIHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 2 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp CCAGAGTTGTATTGGTTTCAAGGGCCTCTAGCAAAGCCTTTGCTCCTTCATTGGGATTATAAACGGAAGTaGCAGGTCATCATAGTTAGA +
Preference number: 2 (lower is better)
Translates to: PELYWFQGPLAKPLLLHWDYKRK*QVIIVR
Trigger: TCTAACTATGATGACCTGCCACTTCCGTTTATAATC...CCAATGAAGGAGCAAAGGCTTTGCTAGAGGCCCTTGAAACCAATACAACTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCCAAATGGGAATTCTaGTTCACTTTTAATGAACAC +
Preference number: 2 (lower is better)
Translates to: SELPLQIAAFLAWWQTPESKWEF*FTFNEH
Trigger: GTGTTCATTAAAAGTGAACCAGAATTCCCATTTGGA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp AAATCCTCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 2 (lower is better)
Translates to: KSSLRESAKAHAPRSPISDTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...ACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp GCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 2 (lower is better)
Translates to: ALHEHSLKNHQPLQLQRMGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...CATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp CACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTAGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 2 (lower is better)
Translates to: HSLKNHQPLQLQRMKDSLGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...TAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: LFGAILDNSLILRSQHFLNSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRNSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: FLFGAILDNSLILRSQHFNSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 2 (lower is better)
Translates to: PFWIIPLFSDPSISWVRANSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATACCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 2 (lower is better)
Translates to: SNESILLCSPSSECFSFIPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR GCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTCTCTGAAGAAGATCTaGTATTTCTGGACAACTCCT +
Preference number: 2 (lower is better)
Translates to: PFWIIPLFSDPSISWVRASLKKI*YFWTTP
Trigger: AGGAGTTGTCCAGAAATAGCAGATCTTCTTCAGAGA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp ACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: TSEDEGLSTVTVTGKPGCHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...GCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATAGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 2 (lower is better)
Translates to: SNESILLCSPSSECFSFIDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCAAGACTCCTGAGTAGTTaGGATTACAAGTGCCCGCCA +
Preference number: 2 (lower is better)
Translates to: VSISTMTENTPFLTLSPARLLSS*DYKCPP
Trigger: TGGCGGGCACTTGTAATCCCAACTACTCAGGAGTCT...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCAGCAATGTTCCCACTTTaGTGTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: VSISTMTENTPFLTLSPAAMFPL*CPKVLG
Trigger: TCCCAGCACTTTGGGACACCAAAGTGGGAACATTGC...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 2 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTCCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 2 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp CTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGCAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 2 (lower is better)
Translates to: LLRFWFFIFKRLLFFFRWQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...CCACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 2 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CATCCAAATGGGAATTCTGGTTCACTTTTAATGAACACAAATGATTACAGGCACGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 2 (lower is better)
Translates to: HPNGNSGSLLMNTNDYRHAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...GTGCCTGTAATCATTTGTGTTCATTAAAAGTGAACCAGAATTCCCATTTGGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 2 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGATTATAAACGGAAGTaGCAGGTCATCATAGTTAGA +
Preference number: 2 (lower is better)
Translates to: PFWIIPLFSDPSISWVRADYKRK*QVIIVR
Trigger: TCTAACTATGATGACCTGCCACTTCCGTTTATAATC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp AAATCCTCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 2 (lower is better)
Translates to: KSSLRESAKAHAPRSPISLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...ACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR TCA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTCCAAACTGTTTTGAGTaGCTGAGTCATTTTGCATTC +
Preference number: 2 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCPNCFE*LSHFAF
Trigger: GAATGCAAAATGACTCAGTCACTCAAAACAGTTTGG...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR TCA 90 bp CTGGGCATTTTCATGTTCCAGCTCACTGACTCGTTTATCAACCTTAAGCCTTATATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 2 (lower is better)
Translates to: LGIFMFQLTDSFINLKPYIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...ATAAGGCTTAAGGTTGATAAACGAGTCAGTGAGCTGGAACATGAAAATGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR GCA 90 bp CTGGGCATTTTCATGTTCCAGCTCACTGACTCGTTTATCAACCTTAAGCCTTATCAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 2 (lower is better)
Translates to: LGIFMFQLTDSFINLKPYQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...ATAAGGCTTAAGGTTGATAAACGAGTCAGTGAGCTGGAACATGAAAATGCCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGGATTATAAACGGAAGTaGCAGGTCATCATAGTTAGA +
Preference number: 2 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVDYKRK*QVIIVR
Trigger: TCTAACTATGATGACCTGCCACTTCCGTTTATAATC...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp AAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCACAGCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 2 (lower is better)
Translates to: KNHQPLQLQRMKDSLLSQLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...CTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR CAA 90 bp GCCAATCTGCCAAAGGCAAACTGCATGGGCACAAATAAACCTATGTaGTTGAAAGTAATTAAAATTTGGGAGCTGTTAATGCAACATCAC +
Preference number: 2 (lower is better)
Translates to: ANLPKANCMGTNKPM*LKVIKIWELLMQHH
Trigger: GTGATGTTGCATTAACAGCTCCCAAATTTTAATTACTTTCAACAACATAGGTTTATTTGTGCCCATGCAGTTTGCCTTTGGCAGATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR CAA 90 bp AATTCTCAATGCTGCCCAAAACACCTTCATCATCCAGGATCATATTaGTCAATGACTGTGCATGAAGGGCTTCAGACAAAGAGAAATTTA +
Preference number: 2 (lower is better)
Translates to: NSQCCPKHLHHPGSY*SMTVHEGLQTKRNL
Trigger: TAAATTTCTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGACAAATATGATCCTGGATGATGAAGGTGTTTTGGGCAGCATTGAGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGTTCTATCCTCTGGAATaGTTTACAAATAAATGTGCC +
Preference number: 2 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVFYPLE*FTNKCA
Trigger: GGCACATTTATTTGTAAACCATTCCAGAGGATAGAA...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 2 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR CAA 90 bp CTTAAACAGCCTTTAAGAGCTTTACACAACTGGAAGGTCACATCTTaGTATCTTATCGCAGGAACACGACTTCTGCAAAATTTATTCATG +
Preference number: 2 (lower is better)
Translates to: LKQPLRALHNWKVTS*YLIAGTRLLQNLFM
Trigger: CATGAATAAATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTTGTGTAAAGCTCTTAAAGGCTGTTTAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 2 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATATCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 2 (lower is better)
Translates to: SNESILLCSPSSECFSFISSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CAA 90 bp AATCTGCCAAAGGCAAACTGCATGGGCACAAATAAACCTATGTTGTaGAAAGTAATTAAAATTTGGGAGCTGTTAATGCAACATCACCTA +
Preference number: 2 (lower is better)
Translates to: NLPKANCMGTNKPML*KVIKIWELLMQHHL
Trigger: TAGGTGATGTTGCATTAACAGCTCCCAAATTTTAATTACTTTCAACAACATAGGTTTATTTGTGCCCATGCAGTTTGCCTTTGGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR CCA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 2 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLSSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CCA 90 bp TCTGAAAAGAATTCTCAATGCTGCCCAAAACACCTTCATCATCCAGGATCATATTCCAAATGGGAATTCTaGTTCACTTTTAATGAACAC +
Preference number: 2 (lower is better)
Translates to: SEKNSQCCPKHLHHPGSYSKWEF*FTFNEH
Trigger: GTGTTCATTAAAAGTGAACCAGAATTCCCATTTGGA...ATATGATCCTGGATGATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTCAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000645865.1
3UTR CAA 90 bp TATTCCTGTGTGAACAGCACATTTACCCTAACTCCATGGATTGTTTaGAGATGTAATCAAAATTGCTTTATGCCTGATGACTTTCAGATT +
Preference number: 2 (lower is better)
Translates to: YSCVNSTFTLTPWIV*RCNQNCFMPDDFQI
Trigger: AATCTGAAAGTCATCAGGCATAAAGCAATTTTGATTACATCTCAAAACAATCCATGGAGTTAGGGTAAATGTGCTGTTCACACAGGAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATATCCAAATGGGAATTCTaGTTCACTTTTAATGAACAC +
Preference number: 2 (lower is better)
Translates to: SNESILLCSPSSECFSFISKWEF*FTFNEH
Trigger: GTGTTCATTAAAAGTGAACCAGAATTCCCATTTGGA...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR TCA 72 bp CAAGGGCCTCTAGCAAAGCCTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCC +
Preference number: 3 (lower is better)
Translates to: QGPLAKPLLLHW*GRTVAGQELSA
Trigger: GGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGCTTTGCTAGAGGCCCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp GCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGTGAGGCCGCACTGTaGCAGGTCAAGAGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: AGTPRLLLEVPKPSGVETGEAAL*QVKSSQ
Trigger: CTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACC...AGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp TTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGAGGGTGAGGCCGCACTGTaGCAGGTCAAGAGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: LLLEVPKPSGVETGTGKEGEAAL*QVKSSQ
Trigger: CTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACC...CTCCTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp GCCTTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCTCCAATTGGACAATTaGCAAGAGACAGGTGCACCA +
Preference number: 3 (lower is better)
Translates to: AFAPSLVRPHCCRSRALSLQLDN*QETGAP
Trigger: TGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAG...GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000647130.1
3UTR CCA 72 bp AGAGATGAGGTCTTGCCCAGGCTGGTCTCAAACTGCTaGTCTCAGCAATGTTCCCACTTTGGTGTCCCAAAG +
Preference number: 3 (lower is better)
Translates to: RDEVLPRLVSNC*SQQCSHFGVPK
Trigger: CTTTGGGACACCAAAGTGGGAACATTGCTGAGACCAGCAGTTTGAGACCAGCCTGGGCAAGACCTCATCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 72 bp TGCAGTACGCCACGGCAAGAAACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATAATATTCTTTACCAAG +
Preference number: 3 (lower is better)
Translates to: CSTPRQETRHTR*KRCGRIIFFTK
Trigger: CTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGGCGTACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTGATCTATCCCAGCCATaGTGGCAAGCTGCCCAAGCC +
Preference number: 3 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTDLSQP*WQAAQA
Trigger: GGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATC...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR GCA 72 bp AAAGCCTTTGCTCCTTCATTGGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGCCATAAATCCTCACTG +
Preference number: 3 (lower is better)
Translates to: KAFAPSLVRPHC*RSRALSHKSSL
Trigger: CAGTGAGGATTTATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR GCA 72 bp CCACGGCAAGAAACCAGACACACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTTACCAAGGGAGTGTTT +
Preference number: 3 (lower is better)
Translates to: PRQETRHTRWKR*GRIIFFTKGVF
Trigger: AAACACTCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp CAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGGCCTTTGCTCCTTCATaGGTGAGGCCGCACTGTTGC +
Preference number: 3 (lower is better)
Translates to: QALHEHSLKNHQPLQLQRAFAPS*VRPHCC
Trigger: GCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGC...CCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR TCA 72 bp GTTGCAGGTCAAGAGCTCTCAGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCACATGCACCTAGGTCAC +
Preference number: 3 (lower is better)
Translates to: VAGQELSAINPH*ESLQKHMHLGH
Trigger: GTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGCTGAGAGCTCTTGACCTGCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTTTGGCCAGGCTGGTCTaGAACTCCTCATCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: HKEGGARTTTFNFAESFILARLV*NSSSQV
Trigger: CACCTGAGATGAGGAGTTCAAGACCAGCCTGGCCAA...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGCTCCAATTGGACAATTaGCAAGAGACAGGTGCACCA +
Preference number: 3 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKLQLDN*QETGAP
Trigger: TGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAG...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR GCA 72 bp ATTCTAGCAATGAATCCTTCAAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: ILAMNPSKDSCR*SVAGTPRLLLE
Trigger: TTCCAGCAACAACCTAGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGGATTCATTGCTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
3UTR GCA 72 bp GAACACATTCTAGCAATGAATCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGGACTCCTAGGTTGTTG +
Preference number: 3 (lower is better)
Translates to: EHILAMNPSKDS*RCSVAGTPRLL
Trigger: CAACAACCTAGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGGATTCATTGCTAGAATGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
3UTR CCA 72 bp GAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGATGCTCCAAAGATGAGT +
Preference number: 3 (lower is better)
Translates to: ELPLQIAAFLAW*QTPESDAPKMS
Trigger: ACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 72 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCAGATGCTCCAAAGATG +
Preference number: 3 (lower is better)
Translates to: SELPLQIAAFLA*WQTPESDAPKM
Trigger: CATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CAA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATCACAGGAAAACCTGGTaGCTGCAACTGATTACATAT +
Preference number: 3 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHHRKTW*LQLITY
Trigger: ATATGTAATCAGTTGCAGCAACCAGGTTTTCCTGTG...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp CAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGCCAGAACGACCAGAGTaGTATTGGTTTCAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: QALHEHSLKNHQPLQLQRPERPE*YWFQGP
Trigger: AGGCCCTTGAAACCAATACAACTCTGGTCGTTCTGG...CCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATTTCTGTTTAGCAGTTTaGGATGGTTCCTTCACTGAT +
Preference number: 3 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHFCLAV*DGSFTD
Trigger: ATCAGTGAAGGAACCATCCAAAACTGCTAAACAGAA...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCCTCTTCGGAGCCATTTaGGATAATTCCCTTATTCTC +
Preference number: 3 (lower is better)
Translates to: SRNWDRKGVERQRNSSITLFGAI*DNSLIL
Trigger: GAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CAA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAATTATAAAAGGGGATTaGCAGGTCACAAAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEIIKGD*QVTKLK
Trigger: CTTCAGCTTTGTGACCTGCAAATCCCCTTTTATAAT...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR CAA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTAGCCTCGCTTCCAGATaGAGGTTGATGTTGAATAGG +
Preference number: 3 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSISLASR*RLMLNR
Trigger: CCTATTCAACATCAACCTCAATCTGGAAGCGAGGCT...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR TCA 72 bp GCTTTTGCCTTGTGCTACTTGAAGCCCTCAACCAAGTaGATCAATACCTCTCAGGCCTCATTCCTTCTTCTT +
Preference number: 3 (lower is better)
Translates to: AFALCYLKPSTK*INTSQASFLLL
Trigger: AAGAAGAAGGAATGAGGCCTGAGAGGTATTGATTCACTTGGTTGAGGGCTTCAAGTAGCACAAGGCAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR GCA 72 bp TTGCTTTTCTGGTTTTCAGGACAGTCAGATCAGGAATaGAGGTCCTTTCCAGGGTGTTGCTTATCAGAGTGT +
Preference number: 3 (lower is better)
Translates to: LLFWFSGQSDQE*RSFPGCCLSEC
Trigger: ACACTCTGATAAGCAACACCCTGGAAAGGACCTGCATTCCTGATCTGACTGTCCTGAAAACCAGAAAAGCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646288.1
3UTR CCA 72 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: WIIPLFSDPSIS*VRAPTSDSCFL
Trigger: AAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 72 bp GGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCCGATCCCAGCATTTCT +
Preference number: 3 (lower is better)
Translates to: GQLNFSSSSEPF*IIPLFSDPSIS
Trigger: AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 72 bp AAGTTGTTGACATACATTTGCTTCCCTCTCTTCTCATaGCAAATGGCAATTCTGCACTTCCCTGGTCTGCTG +
Preference number: 3 (lower is better)
Translates to: KLLTYICFPLFS*QMAILHFPGLL
Trigger: CAGCAGACCAGGGAAGTGCAGAATTGCCATTTGCCATGAGAAGAGAGGGAAGCAAATGTATGTCAACAACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR CAA 90 bp ACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCGTTTCCCTAGTTTCTTaGCTTTTCTGGTTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: TSEDEGLSTVTVTGKPGCVSLVS*LFWFSG
Trigger: TCCTGAAAACCAGAAAAGCAAAGAAACTAGGGAAAC...GCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646288.1
3UTR-3UTR CAA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAACTCTTCGGAGCCATTTaGGATAATTCCCTTATTCTC +
Preference number: 3 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKLFGAI*DNSLIL
Trigger: GAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CAA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTGCTTCCAGATTGAGGTaGATGTTGAATAGGGGCCTC +
Preference number: 3 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCASRLR*MLNRGL
Trigger: GAGGCCCCTATTCAACATCAACCTCAATCTGGAAGC...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCCATCCAGGATCATATTaGTCAATGACTGTGCATGAA +
Preference number: 3 (lower is better)
Translates to: SRNWDRKGVERQRNSSITHPGSY*SMTVHE
Trigger: TTCATGCACAGTCATTGACAAATATGATCCTGGATG...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR GCA 72 bp CCTCCATCTCCAATTGGACAATTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTATTCAATCCCTTTGCT +
Preference number: 3 (lower is better)
Translates to: PPSPIGQFARDR*TKEADLFNPFA
Trigger: AGCAAAGGGATTGAATAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAGATGGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR CCA 72 bp GAGATTCATCCGAATTGTGGCATGTTTGCCACCATATaGATACATCGCTATCCATTCACCTGTTGGAAGACA +
Preference number: 3 (lower is better)
Translates to: EIHPNCGMFATI*IHRYPFTCWKT
Trigger: TGTCTTCCAACAGGTGAATGGATAGCGATGTATCCATATGGTGGCAAACATGCCACAATTCGGATGAATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCGATCCCAGCATTTCTaGGGTCAGAGCTCCCACTTC +
Preference number: 3 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLRSQHF*GQSSHF
Trigger: GAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATCG...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR-3UTR CAA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAATTATAAAAGGGGATTaGCAGGTCACAAAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKIIKGD*QVTKLK
Trigger: CTTCAGCTTTGTGACCTGCAAATCCCCTTTTATAAT...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
3UTR-3UTR CAA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTTCCTCTAACACCTCTTaGGTAGAATTCCTCAGCTTT +
Preference number: 3 (lower is better)
Translates to: HKEGGARTTTFNFAESFISSNTS*VEFLSF
Trigger: AAAGCTGAGGAATTCTACCAAAGAGGTGTTAGAGGA...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTCTCCAATTGGACAATTaGCAAGAGACAGGTGCACCA +
Preference number: 3 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGLQLDN*QETGAP
Trigger: TGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAG...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCAATGGGATTCTGTTTaGGTCTTTTTCTCTGAAGAA +
Preference number: 3 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTQWDSV*VFFSEE
Trigger: TTCTTCAGAGAAAAAGACCAAAACAGAATCCCATTG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR GCA 72 bp GGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTaGACAGCCTCCTTATTCAGCTTTATTAGCTGTAAT +
Preference number: 3 (lower is better)
Translates to: GVHTFHTGVLVL*TASLFSFISCN
Trigger: ATTACAGCTAATAAAGCTGAATAAGGAGGCTGTGCACAACACCAACACACCGGTATGAAAAGTGTGTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 72 bp CATTCACCTGTTGGAAGACATCTTGGTCACTATGAATaGAGCTGCTATAAATATCCACGCACAGGTTTTGTG +
Preference number: 3 (lower is better)
Translates to: HSPVGRHLGHYE*SCYKYPRTGFV
Trigger: CACAAAACCTGTGCGTGGATATTTATAGCAGCTCCATTCATAGTGACCAAGATGTCTTCCAACAGGTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTATCCACGCACAGGTTTaGTGTGAACTAAGTTTTCAT +
Preference number: 3 (lower is better)
Translates to: HKEGGARTTTFNFAESFIIHAQV*CELSFH
Trigger: ATGAAAACTTAGTTCACACAAAACCTGTGCGTGGAT...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAATTACATCCTGTGAAGTaGACTGTCTTAAGAGTGATA +
Preference number: 3 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKLHPVK*TVLRVI
Trigger: TATCACTCTTAAGACAGTCAACTTCACAGGATGTAA...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR TCA 72 bp CACACAGTCTTGTATCTGACTCTTTGGGCACTTGTGTaGATATTTCTTCAGGCTGGATGCCTAAAATTAGTC +
Preference number: 3 (lower is better)
Translates to: HTVLYLTLWALV*IFLQAGCLKLV
Trigger: GACTAATTTTAGGCATCCAGCCTGAAGAAATATTCACACAAGTGCCCAAAGAGTCAGATACAAGACTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR GCA 72 bp CAGAGTTGTTTGATGCAATTTTCCATTAATTATACGTaGACACAAGGAAGGTGGGGCCAGGACTACTACTTT +
Preference number: 3 (lower is better)
Translates to: QSCLMQFSINYT*TQGRWGQDYYF
Trigger: AAAGTAGTAGTCCTGGCCCCACCTTCCTTGTGTGCACGTATAATTAATGGAAAATTGCATCAAACAACTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 72 bp GATTACAGGCACTTATATGGTGATTATAAACGGAAGTaGCAGGTCATCATAGTTAGAGAGATCATGTGGGCA +
Preference number: 3 (lower is better)
Translates to: DYRHLYGDYKRK*QVIIVREIMWA
Trigger: TGCCCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATATAAGTGCCTGTAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 72 bp TTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTaGTGTTGTGCACAGCCTCCTTATTCAGCTTTATTA +
Preference number: 3 (lower is better)
Translates to: LLLVYTLFIPVC*CCAQPPYSALL
Trigger: TAATAAAGCTGAATAAGGAGGCTGTGCACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACTTCTTTCCCGTCTTGTaGGACCTAAAAATTCCATTC +
Preference number: 3 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHFFPVL*DLKIPF
Trigger: GAATGGAATTTTTAGGTCCAACAAGACGGGAAAGAA...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTCCTTCTATTTCGAGATaGTTAAGAATACCAGAGGAT +
Preference number: 3 (lower is better)
Translates to: HKEGGARTTTFNFAESFIPSISR*LRIPED
Trigger: ATCCTCTGGTATTCTTAACAATCTCGAAATAGAAGG...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTACCGCTGTCAATAGCTaGATATGTGTTATCACAGAC +
Preference number: 3 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCTAVNS*ICVITD
Trigger: GTCTGTGATAACACATATCAAGCTATTGACAGCGGT...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp AAATCCTCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTGGTTCTTTAGCACACTaGATATACTTAAACAGCCTT +
Preference number: 3 (lower is better)
Translates to: KSSLRESAKAHAPRSPISGSLAH*IYLNSL
Trigger: AAGGCTGTTTAAGTATATCAAGTGTGCTAAAGAACC...ACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGAGGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTTACATCCTGTGAAGTaGACTGTCTTAAGAGTGATA +
Preference number: 3 (lower is better)
Translates to: PFWIIPLFSDPSISWVRALHPVK*TVLRVI
Trigger: TATCACTCTTAAGACAGTCAACTTCACAGGATGTAA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
3UTR-3UTR CAA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCAGGTTTTGTGTCTTGGTaGGGAATGCCTTTCTTACAC +
Preference number: 3 (lower is better)
Translates to: VSISTMTENTPFLTLSPAGFVSW*GMPFLH
Trigger: GTGTAAGAAAGGCATTCCCAACCAAGACACAAAACC...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp TTTTCTCAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTAACCTCCATCTCCAATaGGACAATTTGCAAGAGACA +
Preference number: 3 (lower is better)
Translates to: FSQALHEHSLKNHQPLQLNLHLQ*DNLQET
Trigger: TGTCTCTTGCAAATTGTCCAATTGGAGATGGAGGTT...AAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
3UTR TCA 72 bp GCAGTTTGCTATAAGGATTACGCTAACCGTATGGAATaGATTAGGGAGCCTTACATCTCTTTTCTATCCTCT +
Preference number: 3 (lower is better)
Translates to: AVCYKDYANRME*IREPYISFLSS
Trigger: AGAGGATAGAAAAGAGATGTAAGGCTCCCTAATTCATTCCATACGGTTAGCGTAATCCTTATAGCAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR GCA 72 bp CATTTTGCATTCCTACCAGCTGTGAGGAACTCCAGTTaGTCTGCATATTTATCAGCATTTCAAAATGTTAGC +
Preference number: 3 (lower is better)
Translates to: HFAFLPAVRNSS*SAYLSAFQNVS
Trigger: GCTAACATTTTGAAATGCTGATAAATATGCAGAGCAACTGGAGTTCCTCACAGCTGGTAGGAATGCAAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTACTCTTCACTCAATCTaGCATGTTTTGGTACAAATC +
Preference number: 3 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCTLHSI*HVLVQI
Trigger: GATTTGTACCAAAACATGCAAGATTGAGTGAAGAGT...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR-3UTR CAA 90 bp CTCCTTTTCTGTTTAGCAGTTTTGGATGGTTCCTTCACTGATGGAGAAGTTATCGGTTCTTTAGCACACTaGATATACTTAAACAGCCTT +
Preference number: 3 (lower is better)
Translates to: LLFCLAVLDGSFTDGEVIGSLAH*IYLNSL
Trigger: AAGGCTGTTTAAGTATATCAAGTGTGCTAAAGAACC...GATAACTTCTCCATCAGTGAAGGAACCATCCAAAACTGCTAAACAGAAAAGGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR TCA 72 bp TGTCCATCCAAAAGCTGTATCAATTTCTACAATGACTaGGAATACTCCTTTCCTCACATTATCTCCAGCACT +
Preference number: 3 (lower is better)
Translates to: CPSKSCINFYND*EYSFPHIISST
Trigger: AGTGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATACAGCTTTTGGATGGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 72 bp GCTTCTTGTTCTATACTAGTTTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCATCAACCTCTTCAACT +
Preference number: 3 (lower is better)
Translates to: ASCSILVFSGTS*TLSEESSTSST
Trigger: AGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAAAACTAGTATAGAACAAGAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR CCA 72 bp ACAAGTTTTAACTATACAAATGTAAACAGGAGTGCGTaGTTACTGTGCAACTTCTTCGTCCTGTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: TSFNYTNVNRSA*LLCNFFVLSMS
Trigger: AGACATTGACAGGACGAAGAAGTTGCACAGTAACCACGCACTCCTGTTTACATTTGTATAGTTAAAACTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 72 bp TGTATGTTAGCATTTAAAGAATCTGCCAAACTGTTTTaGGTGACTGAGTCATTTTGCATTCCTACCAGCTGT +
Preference number: 3 (lower is better)
Translates to: CMLAFKESAKLF*VTESFCIPTSC
Trigger: ACAGCTGGTAGGAATGCAAAATGACTCAGTCACTCAAAACAGTTTGGCAGATTCTTTAAATGCTAACATACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR TCA 72 bp AAACTGTCCATCCAAAAGCTGTATCAATTTCTACAATaGCTGAGAATACTCCTTTCCTCACATTATCTCCAG +
Preference number: 3 (lower is better)
Translates to: KLSIQKLYQFLQ*LRILLSSHYLQ
Trigger: CTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATACAGCTTTTGGATGGACAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 72 bp ATAAATGGAATCATACAGAATGTAGCCTTCCGAGACTaGCTTTTTCACTCAGCATATGATGTTGAGATTCAT +
Preference number: 3 (lower is better)
Translates to: INGIIQNVAFRD*LFHSAYDVEIH
Trigger: ATGAATCTCAACATCATATGCTGAGTGAAAAAGCCAGTCTCGGAAGGCTACATTCTGTATGATTCCATTTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CCA 72 bp GATATACTTAAACAGCCTTTAAGAGCTTTACACAACTaGAAGGTCACATCTTTGTATCTTATCGCAGGAACA +
Preference number: 3 (lower is better)
Translates to: DILKQPLRALHN*KVTSLYLIAGT
Trigger: TGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTTGTGTAAAGCTCTTAAAGGCTGTTTAAGTATATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR-3UTR CAA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTGTTTCCCTAGTTTCTTaGCTTTTCTGGTTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFVSLVS*LFWFSG
Trigger: TCCTGAAAACCAGAAAAGCAAAGAAACTAGGGAAAC...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
3UTR-3UTR CAA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTGTTTCCCTAGTTTCTTaGCTTTTCTGGTTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIVSLVS*LFWFSG
Trigger: TCCTGAAAACCAGAAAAGCAAAGAAACTAGGGAAAC...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
3UTR-3UTR CAA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAGTTTCCCTAGTTTCTTaGCTTTTCTGGTTTTCAGGA +
Preference number: 3 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLVSLVS*LFWFSG
Trigger: TCCTGAAAACCAGAAAAGCAAAGAAACTAGGGAAAC...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
3UTR-3UTR CAA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCATTTTTCTTTCCCGTCTaGTTGGACCTAAAAATTCCA +
Preference number: 3 (lower is better)
Translates to: VSISTMTENTPFLTLSPAFFFPV*LDLKIP
Trigger: TGGAATTTTTAGGTCCAACAAGACGGGAAAGAAAAA...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR GCA 72 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCA +
Preference number: 3 (lower is better)
Translates to: PFHEFKLQMNPF*CVVHLLSVSVS
Trigger: TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
3UTR CCA 72 bp ATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTaGATTTACTTTTATTTGTCTTGGATGAAACAGTCA +
Preference number: 3 (lower is better)
Translates to: IQEYHFQNVLVD*IYFYLSWMKQS
Trigger: TGACTGTTTCATCCAAGACAAATAAAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR TCA 90 bp GCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AGTPRLLLEVPKPSGVETGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...AGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCCCCACCCAAGAACGCTaGGTCGCAACCCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRIPTQER*VATRPL
Trigger: GAGCGGCCGGGTTGCGACTCAGCGTTCTTGGGTGGG...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAACCCACCCAAGAACGCTaGGTCGCAACCCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEPTQER*VATRPL
Trigger: GAGCGGCCGGGTTGCGACTCAGCGTTCTTGGGTGGG...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPRAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GTTCTGCAGTACGCCACGGCAAGAAACCAGACACACCAGGTGGAAGAGGTGCGGGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: VLQYATARNQTHQVEEVRAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...CCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGGCGTACTGCAGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTTCACGGAGTCGATCATaGCCCGAGGGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMASRSRS*PEGGLG
Trigger: CCCGAGGCCGCCCTCGGGCCATGATCGACTCCGTGA...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCCCCACCCAAGAACGCTaGGTCGCAACCCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPPTQER*VATRPL
Trigger: GAGCGGCCGGGTTGCGACTCAGCGTTCTTGGGTGGG...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCCACTTCAGCCTCCTaGGTGGCTGGGACTACATGC +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTPTSAS*VAGTTC
Trigger: GCATGTAGTCCCAGCCACTCAGGAGGCTGAAGTGGG...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCTCACGGAGTCGATCATaGCCCGAGGGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPSRSRS*PEGGLG
Trigger: CCCGAGGCCGCCCTCGGGCCATGATCGACTCCGTGA...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: QALHEHSLKNHQPLQLQRGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...CCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTCGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMARAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTRAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAACGGTTGCAGTGAGCTaGGATCGAGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPTVAVS*DRGGCS
Trigger: ACTGCAACCTCCTCGATCTCAGCTCACTGCAACCGT...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGGTGGGAGGATCATTTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPGGRII*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAATGATCCTCCCACC...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTAGAGCAGTGGTGGCATaGTCACAGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTRAVVA*SQLTAA
Trigger: GGCTGCAGTGAGCTGTGATCATGCCACCACTGCTCT...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGCGGCACCGAGTTCTaGAGCGCGCACAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWSGTEF*SAHRYS
Trigger: CGAGTACCTGTGCGCGCTGCAGAACTCGGTGCCGCT...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTACTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SVAGTPRLLLEVPKPSGVLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...TACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
3UTR CAA 72 bp GTTTCAAGGGCCTCTAGCAAAGCCTTTGCTCCTTCATaGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTC +
Preference number: 4 (lower is better)
Translates to: VSRASSKAFAPS*VRPHCCRSRAL
Trigger: GAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGCTTTGCTAGAGGCCCTTGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
3UTR CAA 72 bp TCCTGCCGCTGCTCAGTAGCTGGGACTCCTAGGTTGTaGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACT +
Preference number: 4 (lower is better)
Translates to: SCRCSVAGTPRL*LEVPKPSGVET
Trigger: AGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGAGCAGCGGCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR TCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCCGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSRAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPLVLNF*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCCTCATCTCAGGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPTPHLR*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACCTGAGATGAGGAGT...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCCCACTTCAGCCTCCTaGGTGGCTGGGACTACATGC +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEPTSAS*VAGTTC
Trigger: GCATGTAGTCCCAGCCACTCAGGAGGCTGAAGTGGG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAAGCGGCACCGAGTTCTaGAGCGCGCACAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKSGTEF*SAHRYS
Trigger: CGAGTACCTGTGCGCGCTGCAGAACTCGGTGCCGCT...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCAGCGGCACCGAGTTCTaGAGCGCGCACAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPSGTEF*SAHRYS
Trigger: CGAGTACCTGTGCGCGCTGCAGAACTCGGTGCCGCT...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp ACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: TPRLLLEVPKPSGVETGTTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...TGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGAGACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: LLLEVPKPSGVETGTGKETRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...CTCCTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGCGGCCCAAGCAGTTaGCGCCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSCGPSS*RPPHSP
Trigger: AGGACTATGAGGCGGGCGCCAACTGCTTGGGCCGCA...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCATCTTTCATGGGGCTaGGCACAGTGGCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTHLSWG*AQWLRS
Trigger: AGACCTGAGCCACTGTGCCCAGCCCCATGAAAGATG...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCTCTATGGCCCAGGCTaGAGTGCAGCGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDALYGPG*SAAVPS
Trigger: AGATGGCACCGCTGCACTCCAGCCTGGGCCATAGAG...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTGTGTTGCCGACTGAGGGGCCCTaGAGGCGGGAACTACAAACC +
Preference number: 4 (lower is better)
Translates to: SLRESAKAHAPRSPISVLPTEGP*RRELQT
Trigger: GGTTTGTAGTTCCCGCCTCCAGGGCCCCTCAGTCGG...CAACACACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTGTAATTTTCTGAAAGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RKGVERQRNSSITCNFLKGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...TTTCAGAAAATTACAGGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGCGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLRAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRARAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCGCCTCATAGTCCTCTaGGGCGCCGGGATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIRLIVL*GAGIQA
Trigger: GGCTTGAATCCCGGCGCCTCAGAGGACTATGAGGCG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp GTTCTGCAGTACGCCACGGCAAGAAACCAGACACACCAGGTGGAAGAGGTGCGGTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: VLQYATARNQTHQVEEVRSNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...CCGCACCTCTTCCACCTGGTGTGTCTGGTTTCTTGCCGTGGCGTACTGCAGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRIPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGAGTTGGGATTACAAGTaGCCGCCACCAAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDESWDYK*PPPSPA
Trigger: AGCCGGGCTTGGTGGCGGGCACTTGTAATCCCAACT...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTAGTTGGGATTACAAGTaGCCGCCACCAAGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTSWDYK*PPPSPA
Trigger: AGCCGGGCTTGGTGGCGGGCACTTGTAATCCCAACT...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGTGACCTCAGCTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGVTSAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGGTCAC...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGACTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTTGCGGCCCAAGCAGTTaGCGCCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFICGPSS*RPPHSP
Trigger: AGGACTATGAGGCGGGCGCCAACTGCTTGGGCCGCA...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTGCGGCCCAAGCAGTTaGCGCCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRACGPSS*RPPHSP
Trigger: AGGACTATGAGGCGGGCGCCAACTGCTTGGGCCGCA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATTCTAAACATCTTTCATaGGGCTGGGCACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: FAPSLVRPHCCRSRALSHSKHLS*GWAQWL
Trigger: GAGCCACTGTGCCCAGCCCCATGAAAGATGTTTAGA...ATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR CCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAAGGTCTTGCCCAGGCTaGTCTCAAACTGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPERSCPG*SQTAGL
Trigger: GAGACCAGCAGTTTGAGACCAGCCTGGGCAAGACCT...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCCGACTGAGGGGCCCTaGAGGCGGGAACTACAAACC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIPTEGP*RRELQT
Trigger: GGTTTGTAGTTCCCGCCTCCAGGGCCCCTCAGTCGG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp CCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTTGGCCATGTCCGACTGAGGGGCCCTaGAGGCGGGAACTACAAACC +
Preference number: 4 (lower is better)
Translates to: PRFLHAFSWSDTLRSWPCPTEGP*RRELQT
Trigger: GGTTTGTAGTTCCCGCCTCCAGGGCCCCTCAGTCGG...ACATGGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDALLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AAGATCAGGTCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KIRSPIAKTLSPGFFMPSLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...AGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGACCTGATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCCATGCCTCAGACTCCTaGGTAGTTGGGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSHASDS*VVGITS
Trigger: ACTTGTAATCCCAACTACTCAGGAGTCTGAGGCATG...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTGCCAGCCATACCTTCTaGGCACCTCAGTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIASHTF*APQSQG
Trigger: GCCCTGTGACTGAGGTGCTCAGAAGGTATGGCTGGC...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGCAAAGGCCACATGGTaGAGGAAGAAAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPAKATW*RKKTGL
Trigger: CAAACCTGTTTTCTTCCTTCACCATGTGGCCTTTGC...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp ACCAGACACACCAGGTGGAAGAGGTGCGGGCGCATAATATTCTTTACCAAGGGACTCCTAGGTTGTTGCTaGAAGTTCCTAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRHTRWKRCGRIIFFTKGLLGCC*KFLSPL
Trigger: CAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAG...TCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCATCTTTCATGGGGCTaGGCACAGTGGCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDAHLSWG*AQWLRS
Trigger: AGACCTGAGCCACTGTGCCCAGCCCCATGAAAGATG...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAATTCTGCACTTCCCTaGTCTGCTGAACTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSNSALP*SAELRH
Trigger: ATGCCTGAGTTCAGCAGACCAGGGAAGTGCAGAATT...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCTCTATGGCCCAGGCTaGAGTGCAGCGGTGCCATCT +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSILYGPG*SAAVPS
Trigger: AGATGGCACCGCTGCACTCCAGCCTGGGCCATAGAG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCTGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GAAAATCTGACTGATCTATCCCAGCCATTGTGGCAAGCTGCCCAAGCCCAGCATGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: ENLTDLSQPLWQAAQAQHGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...ATGCTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAGATCAGTCAGATTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp GCCTTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: AFAPSLVRPHCCRSRALSFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTAGAGCAGTGGTGGCATaGTCACAGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIRAVVA*SQLTAA
Trigger: GGCTGCAGTGAGCTGTGATCATGCCACCACTGCTCT...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPETPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMAAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCTTCTGTGTCCTGCCATaGCTCCATTCATGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSFCVLP*LHSCSN
Trigger: GTTTGAACATGAATGGAGGCATGGCAGGACACAGAA...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSILSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGTGCGGCCCAAGCAGTTaGCGCCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWCGPSS*RPPHSP
Trigger: AGGACTATGAGGCGGGCGCCAACTGCTTGGGCCGCA...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAAGAAAGAACCCATCTTaGCCGGATGCAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPERKNPS*PDAVAH
Trigger: ATGAGCCACTGCATCCGGCCAAGATGGGTTCTTTCT...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCGTAGCCTTCCGAGACTaGCTTTTTCACTCAGCATAT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSVAFRD*LFHSAY
Trigger: ATATGCTGAGTGAAAAAGCCAGTCTCGGAAGGCTAC...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAGCAATGTTCCCACTTTaGTGTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEAMFPL*CPKVLG
Trigger: TCCCAGCACTTTGGGACACCAAAGTGGGAACATTGC...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTAGCCTCCTGAGTGGCTaGGACTACATGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFISLLSG*DYMHAP
Trigger: TGGTGCGTGCATGTAGTCCCAGCCACTCAGGAGGCT...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCTTCAGCCTCCTGAGTaGCTGGGACTACATGCACGC +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRALQPPE*LGLHAR
Trigger: GCGTGCATGTAGTCCCAGCCACTCAGGAGGCTGAAG...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCCTTCAGCCTCCTGAGTaGCTGGGACTACATGCACGC +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFLQPPE*LGLHAR
Trigger: GCGTGCATGTAGTCCCAGCCACTCAGGAGGCTGAAG...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCCCACCCAAGAACGCTaGGTCGCAACCCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFPTQER*VATRPL
Trigger: GAGCGGCCGGGTTGCGACTCAGCGTTCTTGGGTGGG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTCCCACCCAAGAACGCTaGGTCGCAACCCGGCCGCTC +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIPTQER*VATRPL
Trigger: GAGCGGCCGGGTTGCGACTCAGCGTTCTTGGGTGGG...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR TCA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTGTTCCATCCTTTAATTAACTGGTACTTAAATCATCTGCTTCTTATCTTCCAGGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: LFHPLINWYLNHLLLIFQGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...CTGGAAGATAAGAAGCAGATGATTTAAGTACCAGTTAATTAAAGGATGGAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTGGAGGCGGTCGGCGTTaGAATCCAGCACGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIGGGRR*NPARPP
Trigger: GGGAGGGCGTGCTGGATTTCAACGCCGACCGCCTCC...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR TCA 90 bp ACCAGACACACCAGGTGGAAGAGGTGCGGGCGCATAATATTCTTTACCAAGGGATGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: TRHTRWKRCGRIIFFTKGCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...TCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRIAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRALLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAAGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTACGGTTGCAGTGAGCTaGGATCGAGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRATVAVS*DRGGCS
Trigger: ACTGCAACCTCCTCGATCTCAGCTCACTGCAACCGT...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTGGTGGGAGGATCATTTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIGGRII*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAATGATCCTCCCACC...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCATATTTAGACTTTTTCTaGCTACAGGCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPYLDFF*LQAPLV
Trigger: CACCAGAGGTGCCTGTAGTCAGAAAAAGTCTAAATA...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRITRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRISFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDATPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCTACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: LQRMKDSLLSQSQENLVATPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...AGCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPECPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCTGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LQRMKDSLLSQSQENLVAGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...AGCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp CAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: QALHEHSLKNHQPLQLQRKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...CCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCGAATTGTGGCATGTTTaGCACCATATGGATACATCG +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSELWHV*HHMDTS
Trigger: CGATGTATCCATATGGTGGCAAACATGCCACAATTC...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATTCAAGCGACACTCATaGCTCAGACTCCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEFKRHS*LRLLSS
Trigger: ACTACTCAGGAGTCTGAGGCATGAGTGTCGCTTGAA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTAGGCTGGTCTCAAACTaGTGGTCTCAGCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDARLVSN*WSQQCS
Trigger: GGAACATTGCTGAGACCAGCAGTTTGAGACCAGCCT...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCTATCACTCACTATGTaGCTTTGTGAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDALSLTM*LCEQPA
Trigger: GGCTGGCTGCTCACAAAGGCACATAGTGAGTGATAG...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCTATCACTCACTATGTaGCTTTGTGAGCAGCCAGCC +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTLSLTM*LCEQPA
Trigger: GGCTGGCTGCTCACAAAGGCACATAGTGAGTGATAG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTCACGGAGTCGATCATaGCCCGAGGGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWISRSRS*PEGGLG
Trigger: CCCGAGGCCGCCCTCGGGCCATGATCGACTCCGTGA...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR CCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTATCACGGAGTCGATCATaGCCCGAGGGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLSRSRS*PEGGLG
Trigger: CCCGAGGCCGCCCTCGGGCCATGATCGACTCCGTGA...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR CCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTTCACGGAGTCGATCATaGCCCGAGGGCGGCCTCGGG +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFSRSRS*PEGGLG
Trigger: CCCGAGGCCGCCCTCGGGCCATGATCGACTCCGTGA...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSDTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: FAPSLVRPHCCRSRALSHDTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...ATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR CCA 90 bp GCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: ALHEHSLKNHQPLQLQRMTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...CATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIILSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp AAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCACAGCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: KNHQPLQLQRMKDSLLSQLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...CTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp CTGGGCATTTTCATGTTCCAGCTCACTGACTCGTTTATCAACCTTAAGCCTTATCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LGIFMFQLTDSFINLKPYLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...ATAAGGCTTAAGGTTGATAAACGAGTCAGTGAGCTGGAACATGAAAATGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGACTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMADPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACATCTTTCATGGGGCTaGGCACAGTGGCTCAGGTCT +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRHLSWG*AQWLRS
Trigger: AGACCTGAGCCACTGTGCCCAGCCCCATGAAAGATG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTTCTAAACATCTTTCATaGGGCTGGGCACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDASKHLS*GWAQWL
Trigger: GAGCCACTGTGCCCAGCCCCATGAAAGATGTTTAGA...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTAGCCTCCTGAGTGGCTaGGACTACATGCACGCACCA +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIISLLSG*DYMHAP
Trigger: TGGTGCGTGCATGTAGTCCCAGCCACTCAGGAGGCT...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp ACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: TSEDEGLSTVTVTGKPGCGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...GCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDAVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGGGTGGGAGGATCATTTaGGGCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQGGRII*GQEFKT
Trigger: GGTCTTGAACTCCTGGCCTCAAATGATCCTCCCACC...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR TCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACCTGTATCCTTCCCATaGATAAGACAATATCTAGGA +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPPVSFP*IRQYLG
Trigger: TCCTAGATATTGTCTTATTCATGGGAAGGATACAGG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCATTCCTACCAGCTGTaGGGAACTCCAGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIHSYQL*GTPVAL
Trigger: CAGAGCAACTGGAGTTCCTCACAGCTGGTAGGAATG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCCCAAACTGTTTTGAGTaGCTGAGTCATTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSPNCFE*LSHFAF
Trigger: GAATGCAAAATGACTCAGTCACTCAAAACAGTTTGG...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAGCCAGCCATACCTTCTaGGCACCTCAGTCACAGGGC +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSASHTF*APQSQG
Trigger: GCCCTGTGACTGAGGTGCTCAGAAGGTATGGCTGGC...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGATTGCCTTGTGCTACTTaGAGCCCTCAACCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGLPCAT*SPQPSE
Trigger: TTCACTTGGTTGAGGGCTTCAAGTAGCACAAGGCAA...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDATRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp ACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: TSEDEGLSTVTVTGKPGCTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...GCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTSFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITSFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTACTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SVAGTPRLLLEVPKPSGVLSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...TACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: ALHEHSLKNHQPLQLQRMKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...CATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTGCCATGTCAGATTACATCCTGTGAAGTTGACTGTCTTAAGAGTGATAGAGCTCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LPCQITSCEVDCLKSDRAPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...AGCTCTATCACTCTTAAGACAGTCAACTTCACAGGATGTAATCTGACATGGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCAGTAGCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACCTGGATATTTTaGATTTGCCCTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: SVAGTPRLLLEVPKPSGVETWIF*ICPRAF
Trigger: GAATGCCCTAGGGCAAATGCAAAATATCCAGGTTTC...TACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGCTACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRIGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCACAAAGGCAAACTGCATaGGCACAAATAAACCTATGT +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPQRQTA*AQINLC
Trigger: ACATAGGTTTATTTGTGCCCATGCAGTTTGCCTTTG...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAAATTCTGCACTTCCCTaGTCTGCTGAACTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGNSALP*SAELRH
Trigger: ATGCCTGAGTTCAGCAGACCAGGGAAGTGCAGAATT...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGTGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWCLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDECLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGTGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTTGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAACCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGATTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTTTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLRAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCGGGCTCAGGAGCGGTaGTTCGGTCGGAAGACGCAA +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFRAQER*FGRKTQ
Trigger: TTGCGTCTTCCGACCGAATCACCGCTCCTGAGCCCG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCGCCTCATAGTCCTCTaGGGCGCCGGGATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLRLIVL*GAGIQA
Trigger: GGCTTGAATCCCGGCGCCTCAGAGGACTATGAGGCG...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCGCCTCATAGTCCTCTaGGGCGCCGGGATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFRLIVL*GAGIQA
Trigger: GGCTTGAATCCCGGCGCCTCAGAGGACTATGAGGCG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000643347.1
ENST00000645398.1
CDS-3UTR TCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTCGCCTCATAGTCCTCTaGGGCGCCGGGATTCAAGCC +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIRLIVL*GAGIQA
Trigger: GGCTTGAATCCCGGCGCCTCAGAGGACTATGAGGCG...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643347.1
ENST00000645398.1
CDS-3UTR TCA 90 bp AAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCACAGCTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: KNHQPLQLQRMKDSLLSQLVLNF*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...CTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR TCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGCATTCCTACCAGCTGTaGGGAACTCCAGTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVHSYQL*GTPVAL
Trigger: CAGAGCAACTGGAGTTCCTCACAGCTGGTAGGAATG...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTACTCCTCATCTCAGGTaGTCCGCCCACCTCGGCCTC +
Preference number: 4 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLTPHLR*SAHLGL
Trigger: GAGGCCGAGGTGGGCGGATCACCTGAGATGAGGAGT...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTCTTTGGGCACTTGTGTaGATATTTCTTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMALWALV*IFLQAG
Trigger: TCCAGCCTGAAGAAATATTCACACAAGTGCCCAAAG...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTAGCGGCACCGAGTTCTaGAGCGCGCACAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWISGTEF*SAHRYS
Trigger: CGAGTACCTGTGCGCGCTGCAGAACTCGGTGCCGCT...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAAGCGGCACCGAGTTCTaGAGCGCGCACAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLSGTEF*SAHRYS
Trigger: CGAGTACCTGTGCGCGCTGCAGAACTCGGTGCCGCT...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKSNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTTGCTAGAATAGTTAAATCCCTCTCTCTCAGAATTAGTCCATTTAGCTCCAGGGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FARIVKSLSLRISPFSSRVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...CCTGGAGCTAAATGGACTAATTCTGAGAGAGAGGGATTTAACTATTCTAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAATGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKCPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCTGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPCPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLRFWFFIFKRLLFFFRWGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...CCACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGCAGTCAGATCAGGAATaGAGGTCCTTTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QALHEHSLKNHQPLQLQRQSDQE*RSFPGC
Trigger: ACACCCTGGAAAGGACCTGCATTCCTGATCTGACTG...CCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646288.1
CDS-3UTR GCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTNSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTTCACTTTCTGTGTCCTaGCATGCCTCCATTCATGTT +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDASLSVS*HASIHV
Trigger: AACATGAATGGAGGCATGGCAGGACACAGAAAGTGA...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTGTGACTGAGTCATTTTaGATTCCTACCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTVTESF*IPTSCE
Trigger: CTCACAGCTGGTAGGAATGCAAAATGACTCAGTCAC...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGTAGAGATGAGGTCTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLVEMRS*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAGACCTCATCTCTAC...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTTCCATTAATTATACGTaGACACAAGGAAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMASINYT*TQGRWG
Trigger: GCCCCACCTTCCTTGTGTGCACGTATAATTAATGGA...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAACAAATCCTGCTTTTaGCTTGTGCTACTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRINKSCF*LVLLEA
Trigger: GGCTTCAAGTAGCACAAGGCAAAAGCAGGATTTGTT...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGTTTGTGTGGGAAAGATaGAAAGGCCACATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWFVWER*KGHMVK
Trigger: CTTCACCATGTGGCCTTTGCATCTTTCCCACACAAA...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMATGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMAGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSILWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCTCCTAGGTTGTTGCTaGAAGTTCCTAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISLLGCC*KFLSPL
Trigger: CAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAG...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGCTCCTAGGTTGTTGCTaGAAGTTCCTAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLLLGCC*KFLSPL
Trigger: CAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAG...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATCTCCAGTCATTTCAATaGGATTCTGTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FAPSLVRPHCCRSRALSHLQSFQ*DSVLVF
Trigger: AAAGACCAAAACAGAATCCCATTGAAATGACTGGAG...ATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp ACCAGACACACCAGGTGGAAGAGGTGCGGGCGCATAATATTCTTTACCAAGGGATCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: TRHTRWKRCGRIIFFTKGSSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...TCCCTTGGTAAAGAATATTATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTTGCGGCCCAAGCAGTTaGCGCCCGCCTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFCGPSS*RPPHSP
Trigger: AGGACTATGAGGCGGGCGCCAACTGCTTGGGCCGCA...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000643347.1
ENST00000645398.1
CDS-3UTR CCA 90 bp TTTGCTCCTTCATTGGTGAGGCCGCACTGTTGCAGGTCAAGAGCTCTCAGCCATGATTATAAACGGAAGTaGCAGGTCATCATAGTTAGA +
Preference number: 4 (lower is better)
Translates to: FAPSLVRPHCCRSRALSHDYKRK*QVIIVR
Trigger: TCTAACTATGATGACCTGCCACTTCCGTTTATAATC...ATGGCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGAAAACTTCGGCATGGTaGTACATTGCAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEKTSAW*YIAATW
Trigger: CCAAGTAGCTGCAATGTACCACCATGCCGAAGTTTT...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTTTCCCTCTCTTCTCATaGCAAATGGCAATTCTGCAC +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMAFPLFS*QMAILH
Trigger: GTGCAGAATTGCCATTTGCCATGAGAAGAGAGGGAA...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp TGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCTACCAATTTTCACCTTaGGTTCTATTTAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: WVRAPTSDSCFLSLVANSYQFSP*VLFSLQ
Trigger: CTGCAGACTAAATAGAACCCAAGGTGAAAATTGGTA...GGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp GGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGACTGCTTGGTCATATaGTATGTGTATGTTAGCATT +
Preference number: 4 (lower is better)
Translates to: GSELPLQIAAFLAWWQTPDCLVI*YVYVSI
Trigger: AATGCTAACATACACATACCATATGACCAAGCAGTC...TGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTATGGGCCACCGCACCTaGCCTCTTTTTAAAAATAAG +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDAMGHRT*PLFKNK
Trigger: CTTATTTTTAAAAAGAGGCCAGGTGCGGTGGCCCAT...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGAGACTCCTGAGTAGTTaGGATTACAAGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLRLLSS*DYKCPP
Trigger: TGGCGGGCACTTGTAATCCCAACTACTCAGGAGTCT...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GACTCTCAGCCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: DSQPRFLHAFSWSDTLRSAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGGCTGAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: LLRFWFFIFKRLLFFFRWAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...CCACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: AGTPRLLLEVPKPSGVETIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...AGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp ACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: TSEDEGLSTVTVTGKPGCFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...GCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDAFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AAGATCAGGTCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: KIRSPIAKTLSPGFFMPSFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...AGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGACCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAACGGTTGCAGTGAGCTaGGATCGAGGAGGTTGCAGT +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSTVAVS*DRGGCS
Trigger: ACTGCAACCTCCTCGATCTCAGCTCACTGCAACCGT...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGATGCAGGTCACAAAGCTaGAGTAGTTTGTCTCATATC +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGCRSQS*SSLSHI
Trigger: GATATGAGACAAACTACTTCAGCTTTGTGACCTGCA...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTATTTAGACTTTTTCTaGCTACAGGCACCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITYLDFF*LQAPLV
Trigger: CACCAGAGGTGCCTGTAGTCAGAAAAAGTCTAAATA...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR TCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTAATTTCTACAATGACTaGGAATACTCCTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTNFYND*EYSFPH
Trigger: GTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATT...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCCCATTAGTGGATTGTaGAACATACTTCGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEPISGL*NILREL
Trigger: CAACTCACGAAGTATGTTTCACAATCCACTAATGGG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGCAAAGGCCACATGGTaGAGGAAGAAAACAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAAKATW*RKKTGL
Trigger: CAAACCTGTTTTCTTCCTTCACCATGTGGCCTTTGC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWSNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTTGGCCATGTACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: PRFLHAFSWSDTLRSWPCTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...ACATGGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFSFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GCTGGGACTCCTAGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 4 (lower is better)
Translates to: AGTPRLLLEVPKPSGVETEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...AGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp CTCCTTTTCTGTTTAGCAGTTTTGGATGGTTCCTTCACTGATGGAGAAGTTATCGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LLFCLAVLDGSFTDGEVIAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...GATAACTTCTCCATCAGTGAAGGAACCATCCAAAACTGCTAAACAGAAAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCTGAAAAGAATTCTCAATGCTGCCCAAAACACCTTCATCATCCAGGATCATATAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: SEKNSQCCPKHLHHPGSYKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...ATATGATCCTGGATGATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCTGAAAAGAATTCTCAATGCTGCCCAAAACACCTTCATCATCCAGGATCATATCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEKNSQCCPKHLHHPGSYPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...ATATGATCCTGGATGATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR GCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGAAACCTGGATATTTTaGATTTGCCCTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGETWIF*ICPRAF
Trigger: GAATGCCCTAGGGCAAATGCAAAATATCCAGGTTTC...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGGAAACCTGGATATTTTaGATTTGCCCTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEETWIF*ICPRAF
Trigger: GAATGCCCTAGGGCAAATGCAAAATATCCAGGTTTC...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR GCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR GCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCCTGCCAAAGGCAAACTaGATGGGCACAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPLPKAN*MGTNKP
Trigger: AGGTTTATTTGTGCCCATGCAGTTTGCCTTTGGCAG...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR GCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTTCTTTCCTTGGACACTaGAACCAGCAATGTTCCAAA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMASFLGH*NQQCSK
Trigger: TTTGGAACATTGCTGGTTGCAGTGTCCAAGGAAAGA...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR GCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGTTCAAGCGACACTCATaGCTCAGACTCCTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLFKRHS*LRLLSS
Trigger: ACTACTCAGGAGTCTGAGGCATGAGTGTCGCTTGAA...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCAGTGACCTCAGCTCACTaGAACCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VSISTMTENTPFLTLSPAVTSAH*NLCLPG
Trigger: ACCTGGGAGGCAGAGGTTGCAGTGAGCTGAGGTCAC...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTAGGCTGGTCTCAAACTaGTGGTCTCAGCAATGTTCC +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIRLVSN*WSQQCS
Trigger: GGAACATTGCTGAGACCAGCAGTTTGAGACCAGCCT...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGTAGAGATGAGGTCTTaGCCAGGCTGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIVEMRS*PGWSQT
Trigger: AGTTTGAGACCAGCCTGGGCAAGACCTCATCTCTAC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMADTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AAGATCAGGTCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: KIRSPIAKTLSPGFFMPSDTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...AGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGACCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCAACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: VSISTMTENTPFLTLSPATRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CTTAAACAGCCTTTAAGAGCTTTACACAACTGGAAGGTCACATCTTTGTATCTTACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: LKQPLRALHNWKVTSLYLTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...AAGATACAAAGATGTGACCTTCCAGTTGTGTAAAGCTCTTAAAGGCTGTTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AGCTCCAGGTTCTTTAGCACACTTGATATACTTAAACAGCCTTTAAGAGCTTTACTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SSRFFSTLDILKQPLRALLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...TAAAGCTCTTAAAGGCTGTTTAAGTATATCAAGTGTGCTAAAGAACCTGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp GCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: ALHEHSLKNHQPLQLQRMLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...CATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACCTCCTAGGTTGTTGCTaGAAGTTCCTAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHLLGCC*KFLSPL
Trigger: CAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAG...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGCTCCTAGGTTGTTGCTaGAAGTTCCTAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQLLGCC*KFLSPL
Trigger: CAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAG...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCTCCAGTCATTTCAATaGGATTCTGTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTLQSFQ*DSVLVF
Trigger: AAAGACCAAAACAGAATCCCATTGAAATGACTGGAG...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp GAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTGATCCCAGCATTTCTTaGGTCAGAGCTCCCACTTCA +
Preference number: 4 (lower is better)
Translates to: EHSLKNHQPLQLQRMKDSDPSIS*VRAPTS
Trigger: TGAAGTGGGAGCTCTGACCCAAGAAATGCTGGGATC...AGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRISSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPESSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTTCTAAACATCTTTCATaGGGCTGGGCACAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIISKHLS*GWAQWL
Trigger: GAGCCACTGTGCCCAGCCCCATGAAAGATGTTTAGA...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGAGACTCCTGAGTAGTTaGGATTACAAGTGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVRLLSS*DYKCPP
Trigger: TGGCGGGCACTTGTAATCCCAACTACTCAGGAGTCT...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACCTGGTCTCAAACTGCTaGTCTCAGCAATGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHLVSNC*SQQCSH
Trigger: GTGGGAACATTGCTGAGACCAGCAGTTTGAGACCAG...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCGTAAACAGGAGTGCGTaGTTACTGTGCAACTTCTTC +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPVNRSA*LLCNFF
Trigger: GAAGAAGTTGCACAGTAACCACGCACTCCTGTTTAC...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGCCAACTAATCTTCACTaGTCTCTCTGGAACAAGCTA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWPTNLH*SLWNKL
Trigger: TAGCTTGTTCCAGAGAGACCAGTGAAGATTAGTTGG...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp CCTTCCGAGACTGGCTTTTTCACTCAGCATATGATGTaGAGATTCATCCGAATTGTGGCATGTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: PSETGFFTQHMM*RFIRIVACLPP
Trigger: TGGTGGCAAACATGCCACAATTCGGATGAATCTCAACATCATATGCTGAGTGAAAAAGCCAGTCTCGGAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp GCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTaGTGCACAGCCTCCTTATTCAGCTTTATTAGCTGT +
Preference number: 4 (lower is better)
Translates to: AGVHTFHTGVLV*CTASLFSFISC
Trigger: ACAGCTAATAAAGCTGAATAAGGAGGCTGTGCACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRACLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGATGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRCLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSICLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGCTCCAGGTTCTTTAGCACACTTGATATACTTAAACAGCCTTTAAGAGCTTTATTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSRFFSTLDILKQPLRALLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...TAAAGCTCTTAAAGGCTGTTTAAGTATATCAAGTGTGCTAAAGAACCTGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCCCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTGTGTTGCCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: SLRESAKAHAPRSPISVLPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...CAACACACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCCCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGTTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LLRFWFFIFKRLLFFFRWFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...CCACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTCCTTCATTGTAAGCTaGCTGCATACAAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRISFIVS*LHTNRN
Trigger: GTTTCTATTTGTATGCAGTCAGCTTACAATGAAGGA...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR TCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCTGTATCCTTCCCATaGATAAGACAATATCTAGGA +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDAPVSFP*IRQYLG
Trigger: TCCTAGATATTGTCTTATTCATGGGAAGGATACAGG...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCACTGGTCTTGAACTTCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSLVLNF*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGAAGTTCAAGACCAG...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCCAAACTGTTTTGAGTaGCTGAGTCATTTTGCATTC +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEPNCFE*LSHFAF
Trigger: GAATGCAAAATGACTCAGTCACTCAAAACAGTTTGG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTCATATCCTGATCTACTaGTGGGCAAGAGGGATGAAT +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIHILIY*WARGMN
Trigger: ATTCATCCCTCTTGCCCATCAGTAGATCAGGATATG...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGTATCCTTCATATCCTaGTCTACTGATGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLVSFIS*STDGQE
Trigger: CTCTTGCCCATCAGTAGATCAGGATATGAAGGATAC...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGCTAACCGTATGGAATaGATTAGGGAGCCTTACATC +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAANRME*IREPYI
Trigger: GATGTAAGGCTCCCTAATTCATTCCATACGGTTAGC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTCTTTGGGCACTTGTGTaGATATTTCTTCAGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFILWALV*IFLQAG
Trigger: TCCAGCCTGAAGAAATATTCACACAAGTGCCCAAAG...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTCATGGTCTGCAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: SPIAKTLSPGFFMPSHGLQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...CAGACCATGAGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAACAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: SELPLQIAAFLAWWQTPEQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...TTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR GCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR GCA 90 bp CTGTTCCATCCTTTAATTAACTGGTACTTAAATCATCTGCTTCTTATCTTCCAGGTGAGGCCGCACTGTTaGAGGTCAAGAGCTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LFHPLINWYLNHLLLIFQVRPHC*RSRALS
Trigger: GCTGAGAGCTCTTGACCTGCAACAGTGCGGCCTCAC...CTGGAAGATAAGAAGCAGATGATTTAAGTACCAGTTAATTAAAGGATGGAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGACCAGGTGGAAGAGGTaGGGGCGCATAATATTCTTT +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQTRWKR*GRIIFF
Trigger: AAAGAATATTATGCGCCCGCACCTCTTCCACCTGGT...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIISFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGTCTTTTTGCACGTTCTaGAGTACGCCACGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQSFCTF*STPRQE
Trigger: TTCTTGCCGTGGCGTACTGCAGAACGTGCAAAAAGA...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTTTCTCAGGCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: FSQALHEHSLKNHQPLQLAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...AAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTTGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIICPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: KNHQPLQLQRMKDSLLSQCPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...CTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATAAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: SNESILLCSPSSECFSFIKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTTCTCTGAAGAAGATCTaGTATTTCTGGACAACTCCT +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMASLKKI*YFWTTP
Trigger: AGGAGTTGTCCAGAAATAGCAGATCTTCTTCAGAGA...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITNSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGAACTCCAGAATCAGATaGTCCAAAGATGAGTGGAAT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDENSRIR*SKDEWN
Trigger: ATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTT...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACTGCCAAAGGCAAACTaGATGGGCACAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRLPKAN*MGTNKP
Trigger: AGGTTTATTTGTGCCCATGCAGTTTGCCTTTGGCAG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR GCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTCCATTAATTATACGTaGACACAAGGAAGGTGGGGC +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISSINYT*TQGRWG
Trigger: GCCCCACCTTCCTTGTGTGCACGTATAATTAATGGA...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: SDSCFLSLVANSRIRCSKDTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...TTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp GAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: EHSLKNHQPLQLQRMKDSRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...AGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR CCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSITGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLTRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTACCAGACACACCAGGTaGAAGAGGTGCGGGCGCATA +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWITRHTR*KRCGRI
Trigger: TATGCGCCCGCACCTCTTCCACCTGGTGTGTCTGGT...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWILSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTATCCCAGCCATTGTaGCAAGCTGCCCAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLLSQPL*QAAQAQ
Trigger: CTGGGCTTGGGCAGCTTGCCACAATGGCTGGGATAG...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp CTCCTTTTCTGTTTAGCAGTTTTGGATGGTTCCTTCACTGATGGAGAAGTTATCCTCCTAGGTTGTTGCTaGAAGTTCCTAAGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LLFCLAVLDGSFTDGEVILLGCC*KFLSPL
Trigger: CAGAGGGCTTAGGAACTTCCAGCAACAACCTAGGAG...GATAACTTCTCCATCAGTGAAGGAACCATCCAAAACTGCTAAACAGAAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp CTTGGGTCAGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: LGSELPLQIAAFLAWWQTHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...AGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCTGACCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AAGTTATCCACTGGTACTCTGATTTGGCACTCCTTCCATTCTGGAGGACTTTTTGCTGCTTTCTTAGCCTaGTGGCAAACTCCAGAATCA +
Preference number: 4 (lower is better)
Translates to: KLSTGTLIWHSFHSGGLFAAFLA*WQTPES
Trigger: TGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGC...AAAAAGTCCTCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATAACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTSSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCCTTTTCTGTTTAGCAGTTTTGGATGGTTCCTTCACTGATGGAGAAGTTATCAGAAAGAACCCATCTTaGCCGGATGCAGTGGCTCAT +
Preference number: 4 (lower is better)
Translates to: LLFCLAVLDGSFTDGEVIRKNPS*PDAVAH
Trigger: ATGAGCCACTGCATCCGGCCAAGATGGGTTCTTTCT...GATAACTTCTCCATCAGTGAAGGAACCATCCAAAACTGCTAAACAGAAAAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTCAAAGGCAAACTGCATaGGCACAAATAAACCTATGT +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMAQRQTA*AQINLC
Trigger: ACATAGGTTTATTTGTGCCCATGCAGTTTGCCTTTG...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCAAAGGCAAACTGCATaGGCACAAATAAACCTATGT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEQRQTA*AQINLC
Trigger: ACATAGGTTTATTTGTGCCCATGCAGTTTGCCTTTG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCCTTGGTCACTATGAATaGAGCTGCTATAAATATCCA +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRILGHYE*SCYKYP
Trigger: TGGATATTTATAGCAGCTCCATTCATAGTGACCAAG...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTGCAATGTTCCCACTTTaGTGTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCAMFPL*CPKVLG
Trigger: TCCCAGCACTTTGGGACACCAAAGTGGGAACATTGC...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp GTATCAATTTCTACAATGACTGAGAATACTCCTTTCCTCACATTATCTCCAGCAAGGTCTTGCCCAGGCTaGTCTCAAACTGCTGGTCTC +
Preference number: 4 (lower is better)
Translates to: VSISTMTENTPFLTLSPARSCPG*SQTAGL
Trigger: GAGACCAGCAGTTTGAGACCAGCCTGGGCAAGACCT...TGCTGGAGATAATGTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATTGATAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCTTCTCGCAGCTATTGTaGATGAGAGTCTATTTCCTC +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPFSQLL*MRVYFL
Trigger: GAGGAAATAGACTCTCATCCACAATAGCTGCGAGAA...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTGGAAGAAAACAGGTTTaGAAGTCAACAAATCCTGCT +
Preference number: 4 (lower is better)
Translates to: PLQIAAFLAWWQTPESDAGRKQV*KSTNPA
Trigger: AGCAGGATTTGTTGACTTCCAAACCTGTTTTCTTCC...AGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTGGAATAATATTTGTGTaGGAAAGATGCAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTGIIFV*ERCKGH
Trigger: GTGGCCTTTGCATCTTTCCCACACAAATATTATTCC...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp TGCTGCCCAAAACACCTTCATCATCCAGGATCATATTaGTCAATGACTGTGCATGAAGGGCTTCAGACAAAG +
Preference number: 4 (lower is better)
Translates to: CCPKHLHHPGSY*SMTVHEGLQTK
Trigger: CTTTGTCTGAAGCCCTTCATGCACAGTCATTGACAAATATGATCCTGGATGATGAAGGTGTTTTGGGCAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWILLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTATTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTTTGCTCCTTCATTGGTaGGGCCGCACTGTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFLLLHW*GRTVAG
Trigger: ACCTGCAACAGTGCGGCCTCACCAATGAAGGAGCAA...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
CDS-3UTR TCA 90 bp AAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: KNHQPLQLQRMKDSLLSQYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...CTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp GCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: ALHEHSLKNHQPLQLQRMYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...CATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AACTGGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTGCAAAATGGATGGTTCCTTCACTaGTGGAGAAGTTATCCACTG +
Preference number: 4 (lower is better)
Translates to: NWKVTSLYLIAGTRLLQNGWFLH*WRSYPL
Trigger: CAGTGGATAACTTCTCCATCAGTGAAGGAACCATCC...ATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTGTAGCTTTTCCTTTGTaGCCACTTCCTAGAATTATA +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTVAFPL*PLPRII
Trigger: TATAATTCTAGGAAGTGGTCACAAAGGAAAAGCTAC...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp ACTTCAGAGGATGAAGGACTCTCTACTGTCACAGTCACAGGAAAACCTGGTTGCGTAGCTTTTCCTTTGTaGCCACTTCCTAGAATTATA +
Preference number: 4 (lower is better)
Translates to: TSEDEGLSTVTVTGKPGCVAFPL*PLPRII
Trigger: TATAATTCTAGGAAGTGGTCACAAAGGAAAAGCTAC...GCAACCAGGTTTTCCTGTGACTGTGACAGTAGAGAGTCCTTCATCCTCTGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTGGGCATTTTCATGTTCCAGCTCACTGACTCGTTTATCAACCTTAAGCCTTATTTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LGIFMFQLTDSFINLKPYFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...ATAAGGCTTAAGGTTGATAAACGAGTCAGTGAGCTGGAACATGAAAATGCCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TCACTGAGAGAGTCTGCAAAAGCACATGCACCTAGGTCACCAATAAGTGTGTTGTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLRESAKAHAPRSPISVLFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...CAACACACTTATTGGTGACCTAGGTGCATGTGCTTTTGCAGACTCTCTCAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AACTGGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTGCAAAATGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: NWKVTSLYLIAGTRLLQNVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...ATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTTGCAGGTCACAAAGCTaGAGTAGTTTGTCTCATATC +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFICRSQS*SSLSHI
Trigger: GATATGAGACAAACTACTTCAGCTTTGTGACCTGCA...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGGTATCCTTCATATCCTaGTCTACTGATGGGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVVSFIS*STDGQE
Trigger: CTCTTGCCCATCAGTAGATCAGGATATGAAGGATAC...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGCTAACCGTATGGAATaGATTAGGGAGCCTTACATC +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIANRME*IREPYI
Trigger: GATGTAAGGCTCCCTAATTCATTCCATACGGTTAGC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCACTAATTTCTACAATGACTaGGAATACTCCTTTCCTCAC +
Preference number: 4 (lower is better)
Translates to: WIIPLFSDPSISWVRAPTNFYND*EYSFPH
Trigger: GTGAGGAAAGGAGTATTCTCAGTCATTGTAGAAATT...AGTGGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACCCATTAGTGGATTGTaGAACATACTTCGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRPISGL*NILREL
Trigger: CAACTCACGAAGTATGTTTCACAATCCACTAATGGG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CATCCAAATGGGAATTCTGGTTCACTTTTAATGAACACAAATGATTACAGGCACCACTATGTGCCTTTGTaGGCAGCCAGCCATACCTTC +
Preference number: 4 (lower is better)
Translates to: HPNGNSGSLLMNTNDYRHHYVPL*AASHTF
Trigger: GAAGGTATGGCTGGCTGCTCACAAAGGCACATAGTG...GTGCCTGTAATCATTTGTGTTCATTAAAAGTGAACCAGAATTCCCATTTGGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGTTGCCTTGTGCTACTTaGAGCCCTCAACCAAGTGAA +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWLPCAT*SPQPSE
Trigger: TTCACTTGGTTGAGGGCTTCAAGTAGCACAAGGCAA...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: LLRFWFFIFKRLLFFFRWQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...CCACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISLSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRLSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AAGATCAGGTCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 4 (lower is better)
Translates to: KIRSPIAKTLSPGFFMPSEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...AGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGACCTGATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDEEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp ATTTCTAAACCTCCATCTCCAATTGGACAATTTGCAAGAGACAGGTGCACCAAATGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: ISKPPSPIGQFARDRCTKCPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...TTTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAGATGGAGGTTTAGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTAAAGACTCCTGCCGCTaGTCAGTAGCTGGGACTCCT +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFKDSCR*SVAGTP
Trigger: AGGAGTCCCAGCTACTGAGCAGCGGCAGGAGTCTTT...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTCCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACCTTCAAAAGACTCCTaGCGCTGCTCAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLPSKDS*RCSVAG
Trigger: CCCAGCTACTGAGCAGCGGCAGGAGTCTTTTGAAGG...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGAAACCTGGATATTTTaGATTTGCCCTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFETWIF*ICPRAF
Trigger: GAATGCCCTAGGGCAAATGCAAAATATCCAGGTTTC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR GCA 90 bp GACTCTCAGCCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTGAAACCTGGATATTTTaGATTTGCCCTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: DSQPRFLHAFSWSDTLRSETWIF*ICPRAF
Trigger: GAATGCCCTAGGGCAAATGCAAAATATCCAGGTTTC...AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGGCTGAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp CCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTTGGCCATGTGAAACCTGGATATTTTaGATTTGCCCTAGGGCATTC +
Preference number: 4 (lower is better)
Translates to: PRFLHAFSWSDTLRSWPCETWIF*ICPRAF
Trigger: GAATGCCCTAGGGCAAATGCAAAATATCCAGGTTTC...ACATGGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCACCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCCAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSQMNPF*CVVHLL
Trigger: CAGAAGATGGACTACACAGCAGAATGGATTCATTTG...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GCACTTCATGAACACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGTTCTGTGTCCTGCCATaGCTCCATTCATGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: ALHEHSLKNHQPLQLQRMFCVLP*LHSCSN
Trigger: GTTTGAACATGAATGGAGGCATGGCAGGACACAGAA...CATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAAGTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR GCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTGAACTCCAGTTGCTCTaGATATTTATCAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMAELQLL*IFISIS
Trigger: TGAAATGCTGATAAATATGCAGAGCAACTGGAGTTC...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGGAACTCCAGTTGCTCTaGATATTTATCAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWELQLL*IFISIS
Trigger: TGAAATGCTGATAAATATGCAGAGCAACTGGAGTTC...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp GCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAGCTATTGTCTTTATCTaGTGCAGAGTGTTATATGTC +
Preference number: 4 (lower is better)
Translates to: AFLAWWQTPESDAPKMSGAIVFI*CRVLYV
Trigger: GACATATAACACTCTGCAGCAGATAAAGACAATAGC...TCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTGACTCTTTTCTAGGGTaGACACACGCATATATGCTA +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIDSFLG*THAYML
Trigger: TAGCATATATGCGTGTGTGCACCCTAGAAAAGAGTC...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTGGGATACTTTAAGATCTTaGCCATGTGATCTGCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLRFWFFIFKRLLFFFRWDTLRS*PCDLLP
Trigger: AGGGAGCAGATCACATGGCCAAGATCTTAAAGTATC...CCACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGAATGGCTCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LAWWQTPESDAPKMSGMALHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...AGCCATTCCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AAGATCAGGTCTCCTATAGCGAAGACTCTCAGCCCAGGTTTCTTCATGCCTTCTCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 4 (lower is better)
Translates to: KIRSPIAKTLSPGFFMPSLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...AGAAGGCATGAAGAAACCTGGGCTGAGAGTCTTCGCTATAGGAGACCTGATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTCGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000647130.1
CDS-3UTR CCA 90 bp CACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTAACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: HSLKNHQPLQLQRMKDSLTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...TAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AGGTTGTTGCTGGAAGTTCCTAAGCCCTCTGGAGTAGAAACTGGGACAGGAAAGCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: RLLLEVPKPSGVETGTGKHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...CTTTCCTGTCCCAGTTTCTACTCCAGAGGGCTTAGGAACTTCCAGCAACAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp CACTCTCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTAGCTTTCTTAGCCTGGTaGCAAACTCCAGAATCAGAT +
Preference number: 4 (lower is better)
Translates to: HSLKNHQPLQLQRMKDSLAFLAW*QTPESD
Trigger: ATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGC...TAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGAGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGGATTATAAACGGAAGTaGCAGGTCATCATAGTTAGA +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWDYKRK*QVIIVR
Trigger: TCTAACTATGATGACCTGCCACTTCCGTTTATAATC...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGAGCTCCCACTTCAGATAGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCTCCAAATGGGAATTCTaGTTCACTTTTAATGAACAC +
Preference number: 4 (lower is better)
Translates to: RAPTSDSCFLSLVANSRISKWEF*FTFNEH
Trigger: GTGTTCATTAAAAGTGAACCAGAATTCCCATTTGGA...GATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGGAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACAAAACTTCGGCATGGTaGTACATTGCAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHKTSAW*YIAATW
Trigger: CCAAGTAGCTGCAATGTACCACCATGCCGAAGTTTT...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp AAGTTATCCACTGGTACTCTGATTTGGCACTCCTTCCATTCTGGAGGACTTTTTAAAACTTCGGCATGGTaGTACATTGCAGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: KLSTGTLIWHSFHSGGLFKTSAW*YIAATW
Trigger: CCAAGTAGCTGCAATGTACCACCATGCCGAAGTTTT...AAAAAGTCCTCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR CCA 90 bp CTCCTTTTCTGTTTAGCAGTTTTGGATGGTTCCTTCACTGATGGAGAAGTTATCAATTCTGCACTTCCCTaGTCTGCTGAACTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: LLFCLAVLDGSFTDGEVINSALP*SAELRH
Trigger: ATGCCTGAGTTCAGCAGACCAGGGAAGTGCAGAATT...GATAACTTCTCCATCAGTGAAGGAACCATCCAAAACTGCTAAACAGAAAAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000645865.1
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGTACCAATTTTCACCTTaGGTTCTATTTAGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWYQFSP*VLFSLQ
Trigger: CTGCAGACTAAATAGAACCCAAGGTGAAAATTGGTA...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR CCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCACTGGTCTCAAACTGCTaGTCTCAGCAATGTTCCCAC +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSLVSNC*SQQCSH
Trigger: GTGGGAACATTGCTGAGACCAGCAGTTTGAGACCAG...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp AGTAGCAGTTTTGTCAGGGGTAAACAGAGCAGATGTTaGAAACACTCTAGCCAGTGTTTCCAAACAGTAGGA +
Preference number: 4 (lower is better)
Translates to: SSSFVRGKQSRC*KHSSQCFQTVG
Trigger: TCCTACTGTTTGGAAACACTGGCTAGAGTGTTTCAAACATCTGCTCTGTTTACCCCTGACAAAACTGCTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp TCTGCTCCCTGCCATGTCAGATTACATCCTGTGAAGTaGACTGTCTTAAGAGTGATAGAGCTCTTTATACCT +
Preference number: 4 (lower is better)
Translates to: SAPCHVRLHPVK*TVLRVIELFIP
Trigger: AGGTATAAAGAGCTCTATCACTCTTAAGACAGTCAACTTCACAGGATGTAATCTGACATGGCAGGGAGCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTGTAATTTTCTGAAATGCCTTCTCATGGTCTaGTACTTTAAGATCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RKGVERQRNSSITCNFLKCLLMV*YFKILA
Trigger: GGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCA...TTTCAGAAAATTACAGGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AACTGGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTGCAAAATTGTTGCAATTCAGTGTaGTACGTCTTAAGCCAGCCA +
Preference number: 4 (lower is better)
Translates to: NWKVTSLYLIAGTRLLQNCCNSV*YVLSQP
Trigger: TGGCTGGCTTAAGACGTATCACACTGAATTGCAACA...ATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGTATCCACTGGTACTCTaGTTTGGCACTCCTTCCATT +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWYPLVL*FGTPSI
Trigger: AATGGAAGGAGTGCCAAATCAGAGTACCAGTGGATA...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp GCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCGTAGCTTTTCCTTTGTaGCCACTTCCTAGAATTATA +
Preference number: 4 (lower is better)
Translates to: AILDNSLILRSQHFLGQSVAFPL*PLPRII
Trigger: TATAATTCTAGGAAGTGGTCACAAAGGAAAAGCTAC...GCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CTGCCATGTCAGATTACATCCTGTGAAGTTGACTGTCTTAAGAGTGATAGAGCTCCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: LPCQITSCEVDCLKSDRAPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...AGCTCTATCACTCTTAAGACAGTCAACTTCACAGGATGTAATCTGACATGGCAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp GACTCTCAGCCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: DSQPRFLHAFSWSDTLRSFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGGCTGAGAGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTTTCTCAGGCACTTCATaGACACTCTCTGAAGAATCA +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIFSGTS*TLSEES
Trigger: TGATTCTTCAGAGAGTGTTCATGAAGTGCCTGAGAA...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCTGAAAAGAATTCTCAATGCTGCCCAAAACACCTTCATCATCCAGGATCATATGTCAATGACTGTGCATaGAGGGCTTCAGACAAAGAG +
Preference number: 4 (lower is better)
Translates to: SEKNSQCCPKHLHHPGSYVNDCA*RASDKE
Trigger: CTCTTTGTCTGAAGCCCTTCATGCACAGTCATTGAC...ATATGATCCTGGATGATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAACTGTTTTGAGTGACTaGGTCATTTTGCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRTVLSD*VILHSY
Trigger: GTAGGAATGCAAAATGACTCAGTCACTCAAAACAGT...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTACTGTTTTGAGTGACTaGGTCATTTTGCATTCCTAC +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRATVLSD*VILHSY
Trigger: GTAGGAATGCAAAATGACTCAGTCACTCAAAACAGT...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACTCTGCCAAACTGTTTTaGGTGACTGAGTCATTTTGC +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHSAKLF*VTESFC
Trigger: GCAAAATGACTCAGTCACTCAAAACAGTTTGGCAGA...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGAACAGAGCAGATGTTTaGAACACTCTAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVNRADV*NTLASV
Trigger: AACACTGGCTAGAGTGTTTCAAACATCTGCTCTGTT...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACAACAGAGCAGATGTTTaGAACACTCTAGCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHNRADV*NTLASV
Trigger: AACACTGGCTAGAGTGTTTCAAACATCTGCTCTGTT...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTCATGAATTTAAGCTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCACTATGTGCCTTTGTaGGCAGCCAGCCATACCTTC +
Preference number: 4 (lower is better)
Translates to: PFHEFKLQMNPFCCVVHLHYVPL*AASHTF
Trigger: GAAGGTATGGCTGGCTGCTCACAAAGGCACATAGTG...AAGATGGACTACACAGCAGAATGGATTCATTTGAAGCTTAAATTCATGAAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGTTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp CTGGGCATTTTCATGTTCCAGCTCACTGACTCGTTTATCAACCTTAAGCCTTATTTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 4 (lower is better)
Translates to: LGIFMFQLTDSFINLKPYFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...ATAAGGCTTAAGGTTGATAAACGAGTCAGTGAGCTGGAACATGAAAATGCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGTTTGCAAGAGACAGGTaGACCAAAGAAGCCGATTTA +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQFARDR*TKEADL
Trigger: TAAATCGGCTTCTTTGGTGCACCTGTCTCTTGCAAA...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIISNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCTGAAGAATCATCAACCTCTTCAACTTCAGAGGATGAAGGACTCTCTACTGTCCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: SEESSTSSTSEDEGLSTVQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...GACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAAGAGGTTGATGATTCTTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGTCCATTTAGCTCCAGGTTCTTTAGCACACTTGATATACTTAAACAGCCTTTAACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: SPFSSRFFSTLDILKQPLTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...TAAAGGCTGTTTAAGTATATCAAGTGTGCTAAAGAACCTGGAGCTAAATGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTCTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIILSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTGCCATTGTGGCAAGCTaGCCAAGCCCAGCATCTTTA +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIAIVAS*PSPASL
Trigger: TAAAGATGCTGGGCTTGGGCAGCTTGCCACAATGGC...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTCTCTGAAGAAGATCTaGTATTTCTGGACAACTCCT +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISSLKKI*YFWTTP
Trigger: AGGAGTTGTCCAGAAATAGCAGATCTTCTTCAGAGA...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCTCTGAAGAAGATCTaGTATTTCTGGACAACTCCT +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFSLKKI*YFWTTP
Trigger: AGGAGTTGTCCAGAAATAGCAGATCTTCTTCAGAGA...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRQMNPF*CVVHLL
Trigger: CAGAAGATGGACTACACAGCAGAATGGATTCATTTG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTCAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIQMNPF*CVVHLL
Trigger: CAGAAGATGGACTACACAGCAGAATGGATTCATTTG...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIQMNPF*CVVHLL
Trigger: CAGAAGATGGACTACACAGCAGAATGGATTCATTTG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTTTCTGTGTCCTGCCATaGCTCCATTCATGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCFCVLP*LHSCSN
Trigger: GTTTGAACATGAATGGAGGCATGGCAGGACACAGAA...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGCTGCCAAAGGCAAACTaGATGGGCACAAATAAACCT +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWLPKAN*MGTNKP
Trigger: AGGTTTATTTGTGCCCATGCAGTTTGCCTTTGGCAG...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
CDS-3UTR GCA 90 bp AGCTGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGCTCTTCACTCAATCTTaGATGTTTTGGTACAAATCT +
Preference number: 4 (lower is better)
Translates to: SCFLSLVANSRIRCSKDELFTQS*MFWYKS
Trigger: AGATTTGTACCAAAACATGCAAGATTGAGTGAAGAG...CTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp ATTTCTAAACCTCCATCTCCAATTGGACAATTTGCAAGAGACAGGTGCACCAAAACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: ISKPPSPIGQFARDRCTKTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...TTTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGAGATGGAGGTTTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AACTGGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTGCAAAATACTGGTACTCTGATTTaGCACTCCTTCCATTCTGGA +
Preference number: 4 (lower is better)
Translates to: NWKVTSLYLIAGTRLLQNTGTLI*HSFHSG
Trigger: TCCAGAATGGAAGGAGTGCCAAATCAGAGTACCAGT...ATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AACTGGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTGCAAAATGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: NWKVTSLYLIAGTRLLQNGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...ATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AGTCCATTTAGCTCCAGGTTCTTTAGCACACTTGATATACTTAAACAGCCTTTACTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: SPFSSRFFSTLDILKQPLLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...TAAAGGCTGTTTAAGTATATCAAGTGTGCTAAAGAACCTGGAGCTAAATGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp TTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTCCCCTCCAGTCATTTCAATaGGATTCTGTTTTGGTCTTT +
Preference number: 4 (lower is better)
Translates to: FWIIPLFSDPSISWVRAPLQSFQ*DSVLVF
Trigger: AAAGACCAAAACAGAATCCCATTGAAATGACTGGAG...GGGAGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGTAGAAACTGGGACAGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCCACTGTTCAAATTTCTaGTTTTCCAACTCTGCTATT +
Preference number: 4 (lower is better)
Translates to: SRNWDRKGVERQRNSSITHCSNF*FSNSAI
Trigger: AATAGCAGAGTTGGAAAACCAGAAATTTGAACAGTG...GGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCTGTCCCAGTTTCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642654.1
ENST00000645865.1
CDS-3UTR CCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRASSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGTCTTCGGAGCCATTTTaGATAATTCCCTTATTCTCC +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLSSEPF*IIPLFS
Trigger: GGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGA...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTGCTTCTTGTTATAACTaGCTGGCCATTTTTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIASCYN*LAIFPC
Trigger: ACAAGGAAAAATGGCCAGCCAGTTATAACAAGAAGC...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TGCTTTCTTAGCCTGGTGGCAAACTCCAGAATCAGATGCTCCAAAGATGAGTGGCTAATTGGTTATTGCTaGTGTACACACTTTTCATAC +
Preference number: 4 (lower is better)
Translates to: CFLSLVANSRIRCSKDEWLIGYC*CTHFSY
Trigger: GTATGAAAAGTGTGTACACCAGCAATAACCAATTAG...CCACTCATCTTTGGAGCATCTGATTCTGGAGTTTGCCACCAGGCTAAGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TATCAGCATTTCAAAATGTTAGCCATTCTAGTGTGTGTGCAGCAGTCGATCCACTTCTCGCAGCTATTGTaGATGAGAGTCTATTTCCTC +
Preference number: 4 (lower is better)
Translates to: YQHFKMLAILVCVQQSIHFSQLL*MRVYFL
Trigger: GAGGAAATAGACTCTCATCCACAATAGCTGCGAGAA...GTGGATCGACTGCTGCACACACACTAGAATGGCTAACATTTTGAAATGCTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp GATACATCGCTATCCATTCACCTGTTGGAAGACATCTaGGTCACTATGAATGGAGCTGCTATAAATATCCAC +
Preference number: 4 (lower is better)
Translates to: DTSLSIHLLEDI*VTMNGAAINIH
Trigger: GTGGATATTTATAGCAGCTCCATTCATAGTGACCAAGATGTCTTCCAACAGGTGAATGGATAGCGATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
3UTR CAA 72 bp TGTTCATCACCAAAACAAACAAACAAACAAACTCCCTaGTACAGCCTCTTTGTAATCAACTCCTCCCAACCC +
Preference number: 4 (lower is better)
Translates to: CSSPKQTNKQTP*YSLFVINSSQP
Trigger: GGGTTGGGAGGAGTTGATTACAAAGAGGCTGTACAAGGGAGTTTGTTTGTTTGTTTGTTTTGGTGATGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATAGCCATAAATCCTCACTaGGAGAGTCTGCAAAAGCAC +
Preference number: 4 (lower is better)
Translates to: SNESILLCSPSSECFSFIAINPH*ESLQKH
Trigger: GTGCTTTTGCAGACTCTCTCAGTGAGGATTTATGGC...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTGTAGCTTTTCCTTTGTaGCCACTTCCTAGAATTATA +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIVAFPL*PLPRII
Trigger: TATAATTCTAGGAAGTGGTCACAAAGGAAAAGCTAC...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGTAGCTTTTCCTTTGTaGCCACTTCCTAGAATTATA +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFVAFPL*PLPRII
Trigger: TATAATTCTAGGAAGTGGTCACAAAGGAAAAGCTAC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp CACAAGGAAGGTGGGGCCAGGACTACTACTTTTAACTTTGCAGAAAGCTTCATTATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: HKEGGARTTTFNFAESFIIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...AATGAAGCTTTCTGCAAAGTTAAAAGTAGTAGTCCTGGCCCCACCTTCCTTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGATATATCACGTGTTTTaGTTAATGGGAAACCCCTGT +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLIYHVF*LMGNPC
Trigger: ACAGGGGTTTCCCATTAATCAAAACACGTGATATAT...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTGTAATTTTCTGAAACCTGGTTGCTGCAACTaGTTACATATATCACGTGTT +
Preference number: 4 (lower is better)
Translates to: RKGVERQRNSSITCNFLKPGCCN*LHISRV
Trigger: AACACGTGATATATGTAATCAGTTGCAGCAACCAGG...TTTCAGAAAATTACAGGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATTCAACTTCAGAGGATaGAGGACTCTCTACTGTCAC +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSFNFRG*RTLYCH
Trigger: GTGACAGTAGAGAGTCCTTCATCCTCTGAAGTTGAA...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR TCA 90 bp TCACCAATAAGTGTGTTGCAATTCAGTGTGATACGTCTTAAGCCAGCCATACAGTTCATGAACACTCTCTaGAGAATCATCAACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPISVLQFSVIRLKPAIQFMNTL*RIINLF
Trigger: GAAGAGGTTGATGATTCTTCAGAGAGTGTTCATGAA...CTGTATGGCTGGCTTAAGACGTATCACACTGAATTGCAACACACTTATTGGTGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR TCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCCTTCATTGTAAGCTaGCTGCATACAAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSISFIVS*LHTNRN
Trigger: GTTTCTATTTGTATGCAGTCAGCTTACAATGAAGGA...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTCCTTCATTGTAAGCTaGCTGCATACAAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFSFIVS*LHTNRN
Trigger: GTTTCTATTTGTATGCAGTCAGCTTACAATGAAGGA...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGTCCTTCATTGTAAGCTaGCTGCATACAAATAGAAAC +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLSFIVS*LHTNRN
Trigger: GTTTCTATTTGTATGCAGTCAGCTTACAATGAAGGA...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000376598.3
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
CDS-3UTR TCA 90 bp CTAATTGGTTATTGCTGGTGTACACACTTTTCATACCGGTGTGTTGGTGTTGTGCCTGTATCCTTCCCATaGATAAGACAATATCTAGGA +
Preference number: 4 (lower is better)
Translates to: LIGYCWCTHFSYRCVGVVPVSFP*IRQYLG
Trigger: TCCTAGATATTGTCTTATTCATGGGAAGGATACAGG...CACAACACCAACACACCGGTATGAAAAGTGTGTACACCAGCAATAACCAATTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATACATGCCTCAGACTCCTaGGTAGTTGGGATTACAAGT +
Preference number: 4 (lower is better)
Translates to: SNESILLCSPSSECFSFIHASDS*VVGITS
Trigger: ACTTGTAATCCCAACTACTCAGGAGTCTGAGGCATG...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGAGACATTTCACATGTTaGTACACACTGTCAAACTGT +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLRHFTC*YTLSNC
Trigger: ACAGTTTGACAGTGTGTATCAACATGTGAAATGTCT...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGCCGCTGTCAATAGCTTaGTATGTGTTATCACAGACT +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWPLSIA*YVLSQT
Trigger: AGTCTGTGATAACACATATCAAGCTATTGACAGCGG...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGTCACAAAAGGGTTCTaGAAAGGGAAATCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFVTKGF*KGKSKE
Trigger: TTCTTTAGATTTCCCTTTTCAGAACCCTTTTGTGAC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGAGCTGTAGATGTATCAGTTTaGAAACTCAGGTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: PFWIIPLFSDPSISWVRAVDVSV*KLRFSV
Trigger: CACTGAAAACCTGAGTTTTCAAACTGATACATCTAC...AGCTCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR TCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGTAGATGTATCAGTTTaGAAACTCAGGTTTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLVDVSV*KLRFSV
Trigger: CACTGAAAACCTGAGTTTTCAAACTGATACATCTAC...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGTTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTCAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: SSSSEPFWIIPLFSDPSIQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...AATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp GAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGGGTCAGACAGGAACACGACTTCTaGAAAATTTATTCATGTCAG +
Preference number: 4 (lower is better)
Translates to: EPFWIIPLFSDPSISWVRQEHDF*KIYSCQ
Trigger: CTGACATGAATAAATTTTGCAGAAGTCGTGTTCCTG...TCTGACCCAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TTCTGCTTCGGTTCTGGTTTTTCATCTTCAAGCGCCTTCTTTTCTTCTTTAGGTTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: FCFGSGFSSSSAFFSSLGSNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...ACCTAAAGAAGAAAAGAAGGCGCTTGAAGATGAAAAACCAGAACCGAAGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGTCCAATTGGACAATTTaGAAGAGACAGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWSNWTI*KRQVHQ
Trigger: TTGGTGCACCTGTCTCTTGCAAATTGTCCAATTGGA...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AACTGGAAGGTCACATCTTTGTATCTTATCGCAGGAACACGACTTCTGCAAAATCAAGGGAGTGTTTTCTaGCACTACTTACAGGTTTCT +
Preference number: 4 (lower is better)
Translates to: NWKVTSLYLIAGTRLLQNQGSVF*HYLQVS
Trigger: AGAAACCTGTAAGTAGTGGCAGAAAACACTCCCTTG...ATTTTGCAGAAGTCGTGTTCCTGCGATAAGATACAAAGATGTGACCTTCCAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLTPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTACCCCTGTGTCTTTTTaGACGTTCTGCAGTACGCCA +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWITPVSF*TFCSTP
Trigger: TGGCGTACTGCAGAACGTGCAAAAAGACACAGGGGT...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp AAACACTCTAGCCAGTGTTTCCAAACAGTAGGACATTACCCATTAGTGGATTGTCTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: KHSSQCFQTVGHYPLVDCLSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...ACAATCCACTAATGGGTAATGTCCTACTGTTTGGAAACACTGGCTAGAGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGGAAAGGAGTCGAGAGGCAAAGGAATTCTAGCATCACCTGTAATTTTCTGAAACTTTCTTCCTTTAACTaGTTTAGGCACTCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: RKGVERQRNSSITCNFLKLSSFN*FRHSSS
Trigger: ACTGGAGGAGTGCCTAAAGCAGTTAAAGGAAGAAAG...TTTCAGAAAATTACAGGTGATGCTAGAATTCCTTTGCCTCTCGACTCCTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSSEPFWIIPLFSDPSISEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...AGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CCCAGGTTTCTTCATGCCTTCTCATGGTCTGATACTTTAAGATCTTGGCCATGTGAAAAGAATTCTCAATaGTGCCCAAAACACCTTCAT +
Preference number: 4 (lower is better)
Translates to: PRFLHAFSWSDTLRSWPCEKNSQ*CPKHLH
Trigger: ATGAAGGTGTTTTGGGCAGCATTGAGAATTCTTTTC...ACATGGCCAAGATCTTAAAGTATCAGACCATGAGAAGGCATGAAGAAACCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp CTTAAACAGCCTTTAAGAGCTTTACACAACTGGAAGGTCACATCTTTGTATCTTTGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: LKQPLRALHNWKVTSLYLCPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...AAGATACAAAGATGTGACCTTCCAGTTGTGTAAAGCTCTTAAAGGCTGTTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR GCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATATGCCCTAGGGCATTCTaGTTCGGTTCTGGTTTTTCA +
Preference number: 4 (lower is better)
Translates to: SNESILLCSPSSECFSFICPRAF*FGSGFS
Trigger: TGAAAAACCAGAACCGAAGCAGAATGCCCTAGGGCA...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTAGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp CTGTTCCATCCTTTAATTAACTGGTACTTAAATCATCTGCTTCTTATCTTCCAGGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LFHPLINWYLNHLLLIFQGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...CTGGAAGATAAGAAGCAGATGATTTAAGTACCAGTTAATTAAAGGATGGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTGGACTCCTAGGTTGTTaGTGGAAGTTCCTAAGCCCT +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFGLLGC*WKFLSP
Trigger: AGGGCTTAGGAACTTCCAGCAACAACCTAGGAGTCC...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp CTGCCATGTCAGATTACATCCTGTGAAGTTGACTGTCTTAAGAGTGATAGAGCTTCTCTGAAGAAGATCTaGTATTTCTGGACAACTCCT +
Preference number: 4 (lower is better)
Translates to: LPCQITSCEVDCLKSDRASLKKI*YFWTTP
Trigger: AGGAGTTGTCCAGAAATAGCAGATCTTCTTCAGAGA...AGCTCTATCACTCTTAAGACAGTCAACTTCACAGGATGTAATCTGACATGGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
CDS-3UTR GCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCAGTCAGATCAGGAATaGAGGTCCTTTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFQSDQE*RSFPGC
Trigger: ACACCCTGGAAAGGACCTGCATTCCTGATCTGACTG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTCAGTCAGATCAGGAATaGAGGTCCTTTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWIQSDQE*RSFPGC
Trigger: ACACCCTGGAAAGGACCTGCATTCCTGATCTGACTG...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp TCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACAGTCAGATCAGGAATaGAGGTCCTTTCCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: SKSHPRVSLSECSSGLDLQSDQE*RSFPGC
Trigger: ACACCCTGGAAAGGACCTGCATTCCTGATCTGACTG...TAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR GCA 90 bp CTGTTCCATCCTTTAATTAACTGGTACTTAAATCATCTGCTTCTTATCTTCCAGCCCACTTCAGATAGCTaGTTTCTTAGCCTGGTGGCA +
Preference number: 4 (lower is better)
Translates to: LFHPLINWYLNHLLLIFQPTSDS*FLSLVA
Trigger: TGCCACCAGGCTAAGAAAGCAGCTATCTGAAGTGGG...CTGGAAGATAAGAAGCAGATGATTTAAGTACCAGTTAATTAAAGGATGGAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTCAAATGAATCCATTCTaGTGTGTAGTCCATCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIQMNPF*CVVHLL
Trigger: CAGAAGATGGACTACACAGCAGAATGGATTCATTTG...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR GCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAGTGACTGAGTCATTTTaGATTCCTACCAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSVTESF*IPTSCE
Trigger: CTCACAGCTGGTAGGAATGCAAAATGACTCAGTCAC...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCGCTATTGTCTTTATCTaGTGCAGAGTGTTATATGTC +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFAIVFI*CRVLYV
Trigger: GACATATAACACTCTGCAGCAGATAAAGACAATAGC...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp AGATCATGTGGGCAGCTTAACTTCAGTTCCTCTTCGGAGCCATTTTGGATAATTAAATGTAAACAGGAGTaGGTGGTTACTGTGCAACTT +
Preference number: 4 (lower is better)
Translates to: RSCGQLNFSSSSEPFWIIKCKQE*VVTVQL
Trigger: AAGTTGCACAGTAACCACGCACTCCTGTTTACATTT...AATTATCCAAAATGGCTCCGAAGAGGAACTGAAGTTAAGCTGCCCACATGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR GCA 90 bp TATGGTGATTATAAACGGAAGTGGCAGGTCATCATAGTTAGAGAGATCATGTGGAACAAATCCTGCTTTTaGCTTGTGCTACTTGAAGCC +
Preference number: 4 (lower is better)
Translates to: YGDYKRKWQVIIVREIMWNKSCF*LVLLEA
Trigger: GGCTTCAAGTAGCACAAGGCAAAAGCAGGATTTGTT...CCACATGATCTCTCTAACTATGATGACCTGCCACTTCCGTTTATAATCACCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424347.6
ENST00000643273.2
CDS-3UTR CCA 90 bp TTCCTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 4 (lower is better)
Translates to: FLFGAILDNSLILRSQHFLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...GAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTCTTCGGAGCCATTTTGGATAATTCCCTTATTCTCCGATCCCAGCATTTCTTGCTTCATGCCTTCTCATaGTCTGATACTTTAAGATCT +
Preference number: 4 (lower is better)
Translates to: LFGAILDNSLILRSQHFLLHAFS*SDTLRS
Trigger: AGATCTTAAAGTATCAGACCATGAGAAGGCATGAAG...CAAGAAATGCTGGGATCGGAGAATAAGGGAATTATCCAAAATGGCTCCGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000376598.3
ENST00000424347.6
ENST00000642654.1
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCATACGACCAGAGTTGTATTaGTTTCAAGGGCCTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SNESILLCSPSSECFSFIRPELY*FQGPLA
Trigger: TGCTAGAGGCCCTTGAAACCAATACAACTCTGGTCG...TATGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp CTTCAAATGAATCCATTCTGCTGTGTAGTCCATCTTCTGAGTGTTTCAGTTTCAGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: LQMNPFCCVVHLLSVSVSGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...TGAAACTGAAACACTCAGAAGATGGACTACACAGCAGAATGGATTCATTTGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000424347.6
ENST00000643273.2
ENST00000643847.1
ENST00000645865.1
ENST00000647199.1
CDS-3UTR CCA 90 bp TTTGCTAGAATAGTTAAATCCCTCTCTCTCAGAATTAGTCCATTTAGCTCCAGGGGAGAAGTTATCCACTaGTACTCTGATTTGGCACTC +
Preference number: 4 (lower is better)
Translates to: FARIVKSLSLRISPFSSRGEVIH*YSDLAL
Trigger: GAGTGCCAAATCAGAGTACCAGTGGATAACTTCTCC...CCTGGAGCTAAATGGACTAATTCTGAGAGAGAGGGATTTAACTATTCTAGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000642654.1
ENST00000645865.1
ENST00000646288.1
ENST00000647130.1
CDS-3UTR CCA 90 bp AATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTTACTTTCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: NHIQEYHFQNVLVDWIYFLWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...AAAGTAAATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1
CDS-3UTR CCA 90 bp ATTCAAAATCACATCCAAGAGTATCACTTTCAGAATGTTCTAGTGGACTGGATTCTCTGGAGTAGAAACTaGGACAGGAAAGGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: IQNHIQEYHFQNVLVDWILWSRN*DRKGVE
Trigger: CTCGACTCCTTTCCTGTCCCAGTTTCTACTCCAGAG...AATCCAGTCCACTAGAACATTCTGAAAGTGATACTCTTGGATGTGATTTTGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000277082.9
ENST00000376597.9
ENST00000415759.6
ENST00000643347.1
ENST00000643499.1
ENST00000645398.1
ENST00000646288.1