RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP72 (Homo sapiens)

Ensembl gene IDs: ENSG00000112877

Ensembl transcript IDs: ENST00000264935.6, ENST00000499639.2, ENST00000512038.1, ENST00000514507.1, ENST00000625371.1

Found 193 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTaGAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGC +
Preference number: 1 (lower is better)
Translates to: RELLPASTLNKEVQR*RQCNFTRKLKGWPS
Trigger: GCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR-3UTR CCA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTAGGAAGCTTAAGGGGTaGCCCAGCTTCTCGGCAGGA +
Preference number: 2 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFRKLKG*PSFSAG
Trigger: TCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCT...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR-3UTR TCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTACCAAGCTACAGGTCCTaGATACATTCCAAAAATCCT +
Preference number: 2 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVPSYRS*IHSKNP
Trigger: AGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGG...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR CAA 90 bp TACATTCCAAAAATCCTAAATAATTACCAACAGAAGAGAGAACTCTaGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAA +
Preference number: 2 (lower is better)
Translates to: YIPKILNNYQQKREL*PASTLNKEVQRCRQ
Trigger: TTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTGGTAATTATTTAGGATTTTTGGAATGTA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR-3UTR CAA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCACAGAAGAGAGAACTCTaGCCAGCCAGTACACTCAAT +
Preference number: 3 (lower is better)
Translates to: IILRGALENQATGPEYIPQKREL*PASTLN
Trigger: ATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTG...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR GCA 72 bp ATACATAGCTCTCTTTCACATCAGGCAGTAGAACACTaGATTTACTTCATCTCAGGATACTGGATACAAGAT +
Preference number: 3 (lower is better)
Translates to: IHSSLSHQAVEH*IYFISGYWIQD
Trigger: ATCTTGTATCCAGTATCCTGAGATGAAGTAAATGCAGTGTTCTACTGCCTGATGTGAAAGAGAGCTATGTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR CCA 72 bp TGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTaGAGTAATCATATCATTTTACGAGGTGCTTTAGAA +
Preference number: 3 (lower is better)
Translates to: CQCVLSENMQRA*SNHIILRGALE
Trigger: TTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp GTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCCACGCCCCTTCTGGCTaGAGCTCGTGCTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: VQRCRQCNFTRKLKGWPSHAPSG*SSCSRE
Trigger: CTCCCGGGAGCACGAGCTTCAGCCAGAAGGGGCGTG...GCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTGCTGCGCCCGCACCTaGCTCAGCTCCTGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: VQRCRQCNFTRKLKGWPSCCART*LSSCSR
Trigger: CCTGCTGCAGGAGCTGAGCCAGGTGCGGGCGCAGCA...GCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp AGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTTCTCGGCAGGACCAGAGTCCCCACACTaGTACTGTACCAACTGCGGG +
Preference number: 4 (lower is better)
Translates to: RQCNFTRKLKGWPSFSAGPESPH*YCTNCG
Trigger: CCCGCAGTTGGTACAGTACCAGTGTGGGGACTCTGG...TCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp AGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTTCTCGGCAGGAGTCCCACTCGCACTCTaGAATGAGGTTCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: RQCNFTRKLKGWPSFSAGVPLAL*NEVQDC
Trigger: GCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGAC...TCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp AGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCATGCTCCCGGGAGGCCTaGCGAGGTCCCACTCGCACT +
Preference number: 4 (lower is better)
Translates to: RRENSCQPVHSIKKYKGACSREA*RGPTRT
Trigger: AGTGCGAGTGGGACCTCGGCAGGCCTCCCGGGAGCA...TGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATTCCCGGGCGTGCTGCTaGTGCTGCTCAGCAAGGCGG +
Preference number: 4 (lower is better)
Translates to: ENSCQPVHSIKKYKGADNSRACC*CCSARR
Trigger: CCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGA...ATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATACCTCGGCTCTGTGCTaGGCCCGCACCTGGCTCAGC +
Preference number: 4 (lower is better)
Translates to: ENSCQPVHSIKKYKGADNTSALC*ARTWLS
Trigger: GCTGAGCCAGGTGCGGGCGCAGCACAGAGCCGAGGT...ATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp TGTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTGGCACGGAGGACCCATaGGTTCTCTCCGGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: CLKICQCVLSENMQRAWSGTEDP*VLSGQP
Trigger: GGGCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCC...ACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAAAATCCTATCCAGGAGCGCCGCCTaGAGGGCCGTCTTCTTCCCG +
Preference number: 4 (lower is better)
Translates to: RGALENQATGPEYIPKILSRSAA*RAVFFP
Trigger: CGGGAAGAAGACGGCCCTGCAGGCGGCGCTCCTGGA...TAGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp TGTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTGGCACGGGAGGCCTCTaGCTCCGCTCCGTACAGTGG +
Preference number: 4 (lower is better)
Translates to: CLKICQCVLSENMQRAWSGTGGL*LRSVQW
Trigger: CCACTGTACGGAGCGGAGCCAGAGGCCTCCCGTGCC...ACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGAGTACGTGTGTGGCCTaGGGGCACGGGAGGCCTCTG +
Preference number: 4 (lower is better)
Translates to: QQKRELLPASTLNKEVQRSTCVA*GHGRPL
Trigger: CAGAGGCCTCCCGTGCCCCCAGGCCACACACGTACT...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAAAATCCTATCAGCCAGGTCGCGGTaGGGCCCTAAGCCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: RGALENQATGPEYIPKILSARSR*GPKPLF
Trigger: GAAGAGCGGCTTAGGGCCTCACCGCGACCTGGCTGA...TAGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGGGCGATCGTCCAGCTaGTGGAGCTTGGGGAGCAGG +
Preference number: 4 (lower is better)
Translates to: VLSENMQRAWSNHIILRGGRSSS*WSLGSR
Trigger: CCTGCTCCCCAAGCTCCAGCAGCTGGACGATCGCCC...ACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTGGGGTGGTGTGGTCTaGCCTCTTTCAAAGAAGCTG +
Preference number: 4 (lower is better)
Translates to: VQRCRQCNFTRKLKGWPSWGGVV*PLSKKL
Trigger: CAGCTTCTTTGAAAGAGGGCAGACCACACCACCCCA...GCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGAGCACCCTCTGCAGCTaGTCCTCCTCGTCTCACGGC +
Preference number: 4 (lower is better)
Translates to: QQKRELLPASTLNKEVQRSTLCS*SSSSHG
Trigger: GCCGTGAGACGAGGAGGAGCAGCTGCAGAGGGTGCT...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTACACCCCGAGACCTCTaGTCCTCAGTCTCCGAGGCC +
Preference number: 4 (lower is better)
Translates to: LSENMQRAWSNHIILRGATPRDL*SSVSEA
Trigger: GGCCTCGGAGACTGAGGAGCAGAGGTCTCGGGGTGT...AGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAACCAAGCTTGCTGTGCAGGGACCTaGAGCCGCCCCAGCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QRAWSNHIILRGALENQACCAGT*SRPSSC
Trigger: ACAGGAGCTGGGGCGGCTGCAGGTCCCTGCACAGCA...AGCTTGGTTTTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTCAGCAAGGCGGCTTTaGAGGGACTTACTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: VQRCRQCNFTRKLKGWPSSARRL*RDLLSR
Trigger: TCTGGAGAGTAAGTCCCTGCAAAGCCGCCTTGCTGA...GCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGCGGGCGTGCTGCTGCTaGTGCTCAGCAAGGCGGCTT +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRRACCC*CSARRL
Trigger: AAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCG...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTCTCATCTCCCGGGCGTaGTGCTGCTGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSENMQRAWSNHIILRGALISRA*CCCCSA
Trigger: TGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAG...AGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTTCCACCTCGGCTCTGTaGTGCGCCCGCACCTGGCTC +
Preference number: 4 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFSTSAL*CARTWL
Trigger: GAGCCAGGTGCGGGCGCAGCACAGAGCCGAGGTGGA...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGAGGCCTCGGTGCACTTaGCTCTGGGGTGGTGTGGTC +
Preference number: 4 (lower is better)
Translates to: QQKRELLPASTLNKEVQRRPRCT*LWGGVV
Trigger: GACCACACCACCCCAGAGCCAAGTGCACCGAGGCCT...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAACCAAGCTGCCTCACGCCCCTTCTaGCTGAAGCTCGTGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QRAWSNHIILRGALENQAASRPF*LKLVLP
Trigger: CGGGAGCACGAGCTTCAGCCAGAAGGGGCGTGAGGC...AGCTTGGTTTTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGGGTGAAGTACGTGTGTaGCCTGGGGGCACGGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRGEVRV*PGGTGG
Trigger: GCCTCCCGTGCCCCCAGGCCACACACGTACTTCACC...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp AAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACGTCATCCGCATCCATaGCCAGGCTCTGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: KRELLPASTLNKEVQRCRRHPHP*PGSAWP
Trigger: TGGCCAAGCAGAGCCTGGTCATGGATGCGGATGACG...TCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAATGCCTCGTTGCTGTaGAGGGACCTGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRNASLL*RDLQPP
Trigger: GGGCGGCTGCAGGTCCCTGCACAGCAACGAGGCATT...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp AGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTTCTCGGCAGGACGTGGCTGCAGTGTCTaGACTCTTCACTTCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RQCNFTRKLKGWPSFSAGRGCSV*TLHFLF
Trigger: AAAAAGGAAGTGAAGAGTGCAGACACTGCAGCCACG...TCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACCTCCATGGCTGGCGCTaGTGTGTGGAAACAGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLPASTLNKEVQRCRQCNLHGWR*CVETGP
Trigger: TGGCCCTGTTTCCACACAGCAGCGCCAGCCATGGAG...GTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGCGATCGTCCAGCTGCTaGAGCTTGGGGAGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRRSSSC*SLGSRC
Trigger: GCACCTGCTCCCCAAGCTCCAGCAGCTGGACGATCG...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTACGGTGCACTTGGCTCTaGGGTGGTGTGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVRCTWL*GGVVCP
Trigger: AGGGCAGACCACACCACCCCAGAGCCAAGTGCACCG...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACCTCCGCTCCGTACAGTaGCGGAAGCTCTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LLPASTLNKEVQRCRQCNLRSVQ*RKLSTE
Trigger: CTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAG...GTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTCGGGAGACGGCTCTCTaGTGTCGGTCACACCCCGAG +
Preference number: 4 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFRETAL*CRSHPE
Trigger: CTCGGGGTGTGACCGACACCAGAGAGCCGTCTCCCG...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGCTGACCAGGGAGCTGTaGCTCTCCTGCAGCATCTGC +
Preference number: 4 (lower is better)
Translates to: QQKRELLPASTLNKEVQRLTREL*LSCSIC
Trigger: GCAGATGCTGCAGGAGAGCCACAGCTCCCTGGTCAG...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGGGCAGCCTCCATGGCTaGCGCTGCTGTGTGGAAACA +
Preference number: 4 (lower is better)
Translates to: QQKRELLPASTLNKEVQRGSLHG*RCCVET
Trigger: TGTTTCCACACAGCAGCGCCAGCCATGGAGGCTGCC...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp AGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAACCCGTTCCTGCTTTCTaGGCTGTCCTGTCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RELLPASTLNKEVQRCRQPVPAF*AVLSAQ
Trigger: CTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGG...TTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp ATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTTCCGAGGCCTCAGGCTaGGACAAGGTCCTCCCGTTC +
Preference number: 4 (lower is better)
Translates to: IKKYKGADNVTLPGSLRGSEASG*DKVLPF
Trigger: GAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGGA...ACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACCCTGCAGCATCTGCGTaGGCTCCTGGATCTTGTCGT +
Preference number: 4 (lower is better)
Translates to: LLPASTLNKEVQRCRQCNPAASA*APGSCR
Trigger: ACGACAAGATCCAGGAGCTCACGCAGATGCTGCAGG...GTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAGCCTTCCGCTCGCTTaGTCTCACGGGGCGATCGTC +
Preference number: 4 (lower is better)
Translates to: ENMQRAWSNHIILRGALESLPLA*SHGAIV
Trigger: GACGATCGCCCCGTGAGAGCAAGCGAGCGGAAGGCT...TTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAACTCGTCTCACGGCCCTaGTTCCCAGAGTCCCCACAC +
Preference number: 4 (lower is better)
Translates to: ENMQRAWSNHIILRGALELVSRP*FPESPH
Trigger: GTGTGGGGACTCTGGGAAGCAGGGCCGTGAGACGAG...TTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTACCAGACAGCACCCTCTaGAGCTGCTCCTCCTCGTCT +
Preference number: 4 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVPDSTL*SCSSSS
Trigger: AGACGAGGAGGAGCAGCTGCAGAGGGTGCTGTCTGG...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTGCATTCTTCGCTTCCTaGACTTTCCGGGGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSENMQRAWSNHIILRGAAFFAS*TFRGLA
Trigger: TGCCAGCCCCCGGAAAGTGCAGGAAGCGAAGAATGC...AGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGTCCTTGTGTGTGTGGTaGAGCTCCGCCGTCACCTCG +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRSLCVW*SSAVTS
Trigger: CGAGGTGACGGCGGAGCTGCACCACACACACAAGGA...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAACCAAGCTGAGCTGTGGCTCTCCTaGAGCATCTGCGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QRAWSNHIILRGALENQAELWLS*SICVSS
Trigger: GGAGCTCACGCAGATGCTGCAGGAGAGCCACAGCTC...AGCTTGGTTTTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAAGCTCCTTGTGTGTGTaGTGCAGCTCCGCCGTCACC +
Preference number: 4 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVSSLCV*CSSAVT
Trigger: GGTGACGGCGGAGCTGCACCACACACACAAGGAGCT...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp AAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGAGCTGGCGCTGCTGTGTaGAAACAGGGCCATGGTCTT +
Preference number: 4 (lower is better)
Translates to: KRELLPASTLNKEVQRCRAGAAV*KQGHGL
Trigger: AAGACCATGGCCCTGTTTCCACACAGCAGCGCCAGC...TCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACAGGAGTCAGCAGGCCTaGCAGCCTCCATGGCTGGCG +
Preference number: 4 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYRSQQA*QPPWLA
Trigger: CGCCAGCCATGGAGGCTGCCAGGCCTGCTGACTCCT...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp AAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGAACTCGCACTCTGCAATaGGGTTCAGGACTGCCTCGT +
Preference number: 4 (lower is better)
Translates to: KRELLPASTLNKEVQRCRTRTLQ*GSGLPR
Trigger: ACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGT...TCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATAGTCTGGGTGTGGGGTaGAGTACGTGTGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKICQCVLSENMQRAWSNSLGVG*STCVAW
Trigger: CCAGGCCACACACGTACTTCACCCCACACCCAGACT...ATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp GTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGGTGTTCATTGGTGCTaGCCAGGGAGCTGTGGCTCT +
Preference number: 4 (lower is better)
Translates to: VLSENMQRAWSNHIILRGGVHWC*PGSCGS
Trigger: AGAGCCACAGCTCCCTGGTCAGCACCAATGAACACC...ACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAATCCATGACCAGGCTCTaGTTGGCCAAGGCCTCGGTG +
Preference number: 4 (lower is better)
Translates to: ENMQRAWSNHIILRGALESMTRL*LAKASV
Trigger: CACCGAGGCCTTGGCCAAGCAGAGCCTGGTCATGGA...TTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAAAATCCTACAAGGAATGCCTCGTTaGTGTGCAGGGACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RGALENQATGPEYIPKILQGMPR*CAGTCS
Trigger: GCTGCAGGTCCCTGCACAGCAACGAGGCATTCCTTG...TAGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTGCCTGAGCAAGGAATaGCTCGTTGCTGTGCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLPASTLNKEVQRCRQCNCLSKE*LVAVQG
Trigger: TCCCTGCACAGCAACGAGGCATTCCTTGCTCAGGCA...GTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp ATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTTGCTCAGGCTCTCCTTaGGCACGGAGGACCCATGAG +
Preference number: 4 (lower is better)
Translates to: IKKYKGADNVTLPGSLRGCSGSP*ARRTHE
Trigger: CTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCA...ACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAACCAAGCTGGAATAGACAATGACTaGAGCTCAGCCAGGTCGCGG +
Preference number: 4 (lower is better)
Translates to: QRAWSNHIILRGALENQAGIDND*SSARSR
Trigger: CCGCGACCTGGCTGAGCTTCAGTCATTGTCTATTCC...AGCTTGGTTTTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAAAATCCTACTCTCCTGCAGCATCTaGGTGAGCTCCTGGATCTTG +
Preference number: 4 (lower is better)
Translates to: RGALENQATGPEYIPKILLSCSI*VSSWIL
Trigger: CAAGATCCAGGAGCTCACGCAGATGCTGCAGGAGAG...TAGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAAGCTCGGTTAAGGCGTaGAGCCGAAACACTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVSSVKA*SRNTSA
Trigger: GGCAGAAGTGTTTCGGCTCCACGCCTTAACCGAGCT...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAGGCTCTGGGGTGGTGTaGTCTGCCCTCTTTCAAAGA +
Preference number: 4 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVGSGVV*SALFQR
Trigger: TCTTTGAAAGAGGGCAGACCACACCACCCCAGAGCC...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTCACTTGGCTCTGGGGTaGTGTGGTCTGCCCTCTTTC +
Preference number: 4 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFHLALG*CGLPSF
Trigger: GAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTG...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp TGTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTCATGGAGTCTGGGTGTaGGGTGAAGTACGTGTGTGG +
Preference number: 4 (lower is better)
Translates to: CLKICQCVLSENMQRAWSHGVWV*GEVRVW
Trigger: CCACACACGTACTTCACCCCACACCCAGACTCCATG...ACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATCAGCCCAAACCCTCCTaGTCCGAAAACGTCTGGAAT +
Preference number: 4 (lower is better)
Translates to: ENSCQPVHSIKKYKGADNQPKPS*SENVWN
Trigger: ATTCCAGACGTTTTCGGACCAGGAGGGTTTGGGCTG...ATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp ATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTAGGAAGCTTAAGGGGTaGCCCAGCTTCTCGGCAGGA +
Preference number: 4 (lower is better)
Translates to: IKKYKGADNVTLPGSLRGRKLKG*PSFSAG
Trigger: TCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCT...ACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTCCAGGAATAGACAATaGCTGAAGCTCAGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QQKRELLPASTLNKEVQRSRNRQ*LKLSQV
Trigger: GACCTGGCTGAGCTTCAGTCATTGTCTATTCCTGGA...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAAAATCCTAGACAAATCCAACTTCTaGGAAGAGGCCGAGTCCTCG +
Preference number: 4 (lower is better)
Translates to: RGALENQATGPEYIPKILDKSNF*EEAESS
Trigger: CGAGGACTCGGCCTCTTCTCAGAAGTTGGATTTGTC...TAGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGAGCCGAAACACTTCTaGCAACGAGGAGATGCAGTT +
Preference number: 4 (lower is better)
Translates to: ENSCQPVHSIKKYKGADNEPKHF*QRGDAV
Trigger: AACTGCATCTCCTCGTTGGCAGAAGTGTTTCGGCTC...ATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGTCCTCTGATGCAAAATaGAGTCGGGAAGCCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRSSDAK*SREAFR
Trigger: GCGGAAGGCTTCCCGACTGCATTTTGCATCAGAGGA...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTGGTACTGTACCAACTaGGGGCTCAACAGATGTCTG +
Preference number: 4 (lower is better)
Translates to: LLPASTLNKEVQRCRQCNWYCTN*GLNRCL
Trigger: CAGACATCTGTTGAGCCCGCAGTTGGTACAGTACCA...GTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACCTGAGCTGTCCTGTCTaGTCAGGCTCTCCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYLSCPV*SGSPWA
Trigger: TGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAG...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAGGTCCTCCCGTTCCTaGTTTCTGAGCTGTCCTGTC +
Preference number: 4 (lower is better)
Translates to: IILRGALENQATGPEYIPRSSRS*FLSCPV
Trigger: GACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCT...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCTGGCTCAGCTCCTaGAGCAGGTGTTCATTGGTG +
Preference number: 4 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFTWLSS*SRCSLV
Trigger: CACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGT...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCACTGGGACGCTCTCTTTaGAGTCGAGTGAGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: IILRGALENQATGPEYIPLGRSL*SRVSPL
Trigger: CAGAGGACTCACTCGACTCCAAAGAGAGCGTCCCAG...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAAGATGTCTGGATTCTTaGGAACCACGAGAGTCGGCC +
Preference number: 4 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVRCLDS*EPRESA
Trigger: GGCCGACTCTCGTGGTTCCCAAGAATCCAGACATCT...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp CAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAACCAAGCTGGTATCCATGGAGTCTaGGTGTGGGGTGAAGTACGT +
Preference number: 4 (lower is better)
Translates to: QRAWSNHIILRGALENQAGIHGV*VWGEVR
Trigger: ACGTACTTCACCCCACACCCAGACTCCATGGATACC...AGCTTGGTTTTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp TGTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAAGATGTGTCTTGCCTaGGCAAGGAATGCCTCGTTG +
Preference number: 4 (lower is better)
Translates to: CLKICQCVLSENMQRAWSKMCLA*ARNASL
Trigger: CAACGAGGCATTCCTTGCTCAGGCAAGACACATCTT...ACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTTAGAAAACCAAGCTATCGCAGAGCTGTCCTaGGCTGCTGTGAATTCTTCA +
Preference number: 4 (lower is better)
Translates to: QRAWSNHIILRGALENQAIAELS*AAVNSS
Trigger: TGAAGAATTCACAGCAGCTCAGGACAGCTCTGCGAT...AGCTTGGTTTTCTAAAGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp AAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACTCTTTCAAAGAAGCTaGGACGCTCTCTTTGGAGTC +
Preference number: 4 (lower is better)
Translates to: KRELLPASTLNKEVQRCRLFQRS*DALFGV
Trigger: GACTCCAAAGAGAGCGTCCCAGCTTCTTTGAAAGAG...TCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATAATGCAGTCAGGTACTaGATGCCCTCCAGACTAACC +
Preference number: 4 (lower is better)
Translates to: LKICQCVLSENMQRAWSNNAVRY*MPSRLT
Trigger: GGTTAGTCTGGAGGGCATTCAGTACCTGACTGCATT...ATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp CTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACAGGCACCATTTCTCCTaGCAAATCCAACTTCTGAGA +
Preference number: 4 (lower is better)
Translates to: LLPASTLNKEVQRCRQCNRHHFS*QIQLLR
Trigger: TCTCAGAAGTTGGATTTGTCAGGAGAAATGGTGCCT...GTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAATGAGGTTCAGGACTaGCTCGTCATCCGCATCCAT +
Preference number: 4 (lower is better)
Translates to: IILRGALENQATGPEYIPNEVQD*LVIRIH
Trigger: ATGGATGCGGATGACGAGGCAGTCCTGAACCTCATT...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp TGTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTTCAATGTGTTCTGTCTaGAAACATGCAGAGGGCTTG +
Preference number: 4 (lower is better)
Translates to: CLKICQCVLSENMQRAWSSMCSV*KHAEGL
Trigger: CAAGCCCTCTGCATGTTTTCAGACAGAACACATTGA...ACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATTTCTGTCTGAAAACATaGAGAGGGCTTGGAGTAATC +
Preference number: 4 (lower is better)
Translates to: ENSCQPVHSIKKYKGADNFCLKT*RGLGVI
Trigger: GATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAA...ATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGGCTCAACAGATGTCTaGATTCTTGGGAACCACGAG +
Preference number: 4 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYGSTDV*ILGNHE
Trigger: CTCGTGGTTCCCAAGAATCCAGACATCTGTTGAGCC...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp TGTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTTCTGCAAATTTAACGTaGCTGCAGTGTCTGCACTCT +
Preference number: 4 (lower is better)
Translates to: CLKICQCVLSENMQRAWSSANLT*LQCLHS
Trigger: AGAGTGCAGACACTGCAGCCACGTTAAATTTGCAGA...ACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTCTCTTCACACTTGTTTaGAGTCCAGCGATCTGCAAA +
Preference number: 4 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFLFTLV*SPAICK
Trigger: TTTGCAGATCGCTGGACTTCAAACAAGTGTGAAGAG...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp GTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTCCAAGCTACAGGTCCTaGATACATTCCAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: VLSENMQRAWSNHIILRGPSYRS*IHSKNP
Trigger: AGGATTTTTGGAATGTATTCAGGACCTGTAGCTTGG...ACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp CTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATAGAGCTGTCCTGAGCTaGTGTGAATTCTTCAACAGA +
Preference number: 4 (lower is better)
Translates to: LKICQCVLSENMQRAWSNRAVLS*CEFFNR
Trigger: TCTGTTGAAGAATTCACAGCAGCTCAGGACAGCTCT...ATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp GCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAGAAGAGAGAACTCTTaGCAGCCAGTACACTCAATA +
Preference number: 4 (lower is better)
Translates to: ASTLNKEVQRCRQCNFTRRRENS*QPVHSI
Trigger: TATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCT...CCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp ATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGAATTCTTCAACAGATaGCAAGATGTGTCTTGCCTG +
Preference number: 4 (lower is better)
Translates to: IKKYKGADNVTLPGSLRGEFFNR*QDVSCL
Trigger: CAGGCAAGACACATCTTGTCATCTGTTGAAGAATTC...ACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp ATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTCAGGCAGTAGAACACTaGATTTACTTCATCTCAGGA +
Preference number: 4 (lower is better)
Translates to: IKKYKGADNVTLPGSLRGQAVEH*IYFISG
Trigger: TCCTGAGATGAAGTAAATGCAGTGTTCTACTGCCTG...ACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCACCTTTGTACTTCTTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACTGGTCCGAAAACGTCTaGAATCTTCCAACAGGCATT +
Preference number: 4 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYWSENV*NLPTGI
Trigger: AATGCCTGTTGGAAGATTCCAGACGTTTTCGGACCA...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR TCA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACAGTTGTAGTAGAGATTaGGACTCTCCAATGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYSCSRD*DSPMQS
Trigger: TGACTGCATTGGAGAGTCTCAATCTCTACTACAACT...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR GCA 90 bp AAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGATATCATTTTACGAGGTaGTTTAGAAAACCAAGCTAC +
Preference number: 4 (lower is better)
Translates to: KRELLPASTLNKEVQRCRYHFTR*FRKPSY
Trigger: GTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGATA...TCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CCA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAACATGCAGAGGGCTTaGAGTAATCATATCATTTTA +
Preference number: 4 (lower is better)
Translates to: IILRGALENQATGPEYIPNMQRA*SNHIIL
Trigger: TAAAATGATATGATTACTCCAAGCCCTCTGCATGTT...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
3UTR CAA 72 bp AAAATCCTAAATAATTACCAACAGAAGAGAGAACTCTaGCCAGCCAGTACACTCAATAAAGAAGTACAAAGG +
Preference number: 4 (lower is better)
Translates to: KILNNYQQKREL*PASTLNKEVQR
Trigger: CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTGGTAATTATTTAGGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp CAGCTCCTGTCCACCAGGTCCAAGAGCGTCTCCAGGAGCGCCGCCTaGAGGGCCGTCTTCTTCCCGGGTAGAGCCGAGTGTGACCCGGGA +
Preference number: 5 (lower is better)
Translates to: QLLSTRSKSVSRSAA*RAVFFPGRAECDPG
Trigger: TCCCGGGTCACACTCGGCTCTACCCGGGAAGAAGACGGCCCTGCAGGCGGCGCTCCTGGAGACGCTCTTGGACCTGGTGGACAGGAGCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp GTGTGGGGTGAAGTACGTGTGTGGCCTGGGGGCACGGGAGGCCTCTaGCTCCGCTCCGTACAGTGGCGGAAGCTCTCCACAGAGCTGGCT +
Preference number: 5 (lower is better)
Translates to: VWGEVRVWPGGTGGL*LRSVQWRKLSTELA
Trigger: AGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAGAGGCCTCCCGTGCCCCCAGGCCACACACGTACTTCACCCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp AGCTCCGCCGTCACCTCGCTCATCTCCCGGGCGTGCTGCTGCTGCTaGTCAGCAAGGCGGCTTTGCAGGGACTTACTCTCCAGAGCCAGG +
Preference number: 5 (lower is better)
Translates to: SSAVTSLISRACCCC*SARRLCRDLLSRAR
Trigger: CCTGGCTCTGGAGAGTAAGTCCCTGCAAAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp TGCTCCACCTCGGCTCTGTGCTGCGCCCGCACCTGGCTCAGCTCCTaGAGCAGGTGTTCATTGGTGCTGACCAGGGAGCTGTGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: CSTSALCCARTWLSS*SRCSLVLTRELWLS
Trigger: GGAGAGCCACAGCTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGTGCGGGCGCAGCACAGAGCCGAGGTGGAGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000512038.1
CDS CCA 90 bp TGTCTGGATTCTTGGGAACCACGAGAGTCGGCCTCACGCCCCTTCTaGCTGAAGCTCGTGCTCCCGGGAGGCCTGCCGAGGTCCCACTCG +
Preference number: 5 (lower is better)
Translates to: CLDSWEPRESASRPF*LKLVLPGGLPRSHS
Trigger: CGAGTGGGACCTCGGCAGGCCTCCCGGGAGCACGAGCTTCAGCCAGAAGGGGCGTGAGGCCGACTCTCGTGGTTCCCAAGAATCCAGACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp GTCCTCGGTATCCATGGAGTCTGGGTGTGGGGTGAAGTACGTGTGTaGCCTGGGGGCACGGGAGGCCTCTGGCTCCGCTCCGTACAGTGG +
Preference number: 5 (lower is better)
Translates to: VLGIHGVWVWGEVRV*PGGTGGLWLRSVQW
Trigger: CCACTGTACGGAGCGGAGCCAGAGGCCTCCCGTGCCCCCAGGCCACACACGTACTTCACCCCACACCCAGACTCCATGGATACCGAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp CTCCAGTGCATCTGCTCCACCTCGGCTCTGTGCTGCGCCCGCACCTaGCTCAGCTCCTGCAGCAGGTGTTCATTGGTGCTGACCAGGGAG +
Preference number: 5 (lower is better)
Translates to: LQCICSTSALCCART*LSSCSRCSLVLTRE
Trigger: CTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGTGCGGGCGCAGCACAGAGCCGAGGTGGAGCAGATGCACTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000512038.1
CDS TCA 90 bp CTCCGAGGCCTCAGGCTGAGACAAGGTCCTCCCGTTCCTGCTTTCTaGGCTGTCCTGTCTGCTCAGGCTCTCCTTGGGCACGGAGGACCC +
Preference number: 5 (lower is better)
Translates to: LRGLRLRQGPPVPAF*AVLSAQALLGHGGP
Trigger: GGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp GAAGCTCGTGCTCCCGGGAGGCCTGCCGAGGTCCCACTCGCACTCTaGAATGAGGTTCAGGACTGCCTCGTCATCCGCATCCATGACCAG +
Preference number: 5 (lower is better)
Translates to: EARAPGRPAEVPLAL*NEVQDCLVIRIHDQ
Trigger: CTGGTCATGGATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCTCCCGGGAGCACGAGCTTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp TCCAGACAGCACCCTCTGCAGCTGCTCCTCCTCGTCTCACGGCCCTaGTTCCCAGAGTCCCCACACTGGTACTGTACCAACTGCGGGCTC +
Preference number: 5 (lower is better)
Translates to: SRQHPLQLLLLVSRP*FPESPHWYCTNCGL
Trigger: GAGCCCGCAGTTGGTACAGTACCAGTGTGGGGACTCTGGGAAGCAGGGCCGTGAGACGAGGAGGAGCAGCTGCAGAGGGTGCTGTCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp GCCTCTGGCTCCGCTCCGTACAGTGGCGGAAGCTCTCCACAGAGCTaGCTCCAAGGCATCTTCTCCAGACAGCACCCTCTGCAGCTGCTC +
Preference number: 5 (lower is better)
Translates to: ASGSAPYSGGSSPQS*LQGIFSRQHPLQLL
Trigger: GAGCAGCTGCAGAGGGTGCTGTCTGGAGAAGATGCCTTGGAGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAGAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS TCA 90 bp GAGCTGTCCTGTCTGCTCAGGCTCTCCTTGGGCACGGAGGACCCATaGGTTCTCTCCGGGCAGCCCAAACCCTCCTGGTCCGAAAACGTC +
Preference number: 5 (lower is better)
Translates to: ELSCLLRLSLGTEDP*VLSGQPKPSWSENV
Trigger: GACGTTTTCGGACCAGGAGGGTTTGGGCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp AGGCCTGCCGAGGTCCCACTCGCACTCTGCAATGAGGTTCAGGACTaGCTCGTCATCCGCATCCATGACCAGGCTCTGCTTGGCCAAGGC +
Preference number: 5 (lower is better)
Translates to: RPAEVPLALCNEVQD*LVIRIHDQALLGQG
Trigger: GCCTTGGCCAAGCAGAGCCTGGTCATGGATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp CCTCAGTCTCCGAGGCCTCAGGCTGAGACAAGGTCCTCCCGTTCCTaGTTTCTGAGCTGTCCTGTCTGCTCAGGCTCTCCTTGGGCACGG +
Preference number: 5 (lower is better)
Translates to: PQSPRPQAETRSSRS*FLSCPVCSGSPWAR
Trigger: CCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGGAGACTGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp TGTGTCTTGCCTGAGCAAGGAATGCCTCGTTGCTGTGCAGGGACCTaGAGCCGCCCCAGCTCCTGTCCACCAGGTCCAAGAGCGTCTCCA +
Preference number: 5 (lower is better)
Translates to: CVLPEQGMPRCCAGT*SRPSSCPPGPRASP
Trigger: TGGAGACGCTCTTGGACCTGGTGGACAGGAGCTGGGGCGGCTGCAGGTCCCTGCACAGCAACGAGGCATTCCTTGCTCAGGCAAGACACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp TCACTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATGCTTGGCCTaGTGGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCTTCCCTGGTG +
Preference number: 5 (lower is better)
Translates to: SLWILQLGVPSECLA*WVQPFSRCPEASLV
Trigger: CACCAGGGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CCA 90 bp CTTGGTCACTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATGCTTaGCCTGCTGGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCTTCCC +
Preference number: 5 (lower is better)
Translates to: LGHCGFCSWECPRNA*PAGCSLSRAVQRLP
Trigger: GGGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS TCA 90 bp GTCACACCCCGAGACCTCTGCTCCTCAGTCTCCGAGGCCTCAGGCTaGGACAAGGTCCTCCCGTTCCTGCTTTCTGAGCTGTCCTGTCTG +
Preference number: 5 (lower is better)
Translates to: VTPRDLCSSVSEASG*DKVLPFLLSELSCL
Trigger: CAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGGAGACTGAGGAGCAGAGGTCTCGGGGTGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp GACTCTTGGTCACTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATaGTTGGCCTGCTGGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: DSWSLWILQLGVPSE*LACWVQPFSRCPEA
Trigger: AGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CCA 90 bp TCCCGTTCCTGCTTTCTGAGCTGTCCTGTCTGCTCAGGCTCTCCTTaGGCACGGAGGACCCATGAGTTCTCTCCGGGCAGCCCAAACCCT +
Preference number: 5 (lower is better)
Translates to: SRSCFLSCPVCSGSP*ARRTHEFSPGSPNP
Trigger: AGGGTTTGGGCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp CTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATGCTTGGCCTGCTaGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCTTCCCTGGTGAAA +
Preference number: 5 (lower is better)
Translates to: LWILQLGVPSECLAC*VQPFSRCPEASLVK
Trigger: TTTCACCAGGGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS TCA 90 bp CTCCATGGCTGGCGCTGCTGTGTGGAAACAGGGCCATGGTCTTCTTaGGCTCCTGGTAGCTCCAGTGCATCTGCTCCACCTCGGCTCTGT +
Preference number: 5 (lower is better)
Translates to: LHGWRCCVETGPWSS*APGSSSASAPPRLC
Trigger: ACAGAGCCGAGGTGGAGCAGATGCACTGGAGCTACCAGGAGCTCAAGAAGACCATGGCCCTGTTTCCACACAGCAGCGCCAGCCATGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264935.6
ENST00000499639.2
ENST00000512038.1
CDS GCA 90 bp GCTGGGACGCTCTCTTTGGAGTCGAGTGAGTCCTCTGATGCAAAATaGAGTCGGGAAGCCTTCCGCTCGCTTGCTCTCACGGGGCGATCG +
Preference number: 5 (lower is better)
Translates to: AGTLSLESSESSDAK*SREAFRSLALTGRS
Trigger: CGATCGCCCCGTGAGAGCAAGCGAGCGGAAGGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAGCGTCCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000625371.1
CDS GCA 90 bp GCTGAGACAAGGTCCTCCCGTTCCTGCTTTCTGAGCTGTCCTGTCTaGTCAGGCTCTCCTTGGGCACGGAGGACCCATGAGTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: AETRSSRSCFLSCPV*SGSPWARRTHEFSP
Trigger: CGGAGAGAACTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp ATTTGTCCCCTGACTCTTGGTCACTGTGGATTCTGCAGCTGGGAGTaGCCTCGGAATGCTTGGCCTGCTGGGTGCAGCCTTTCTCGCGCT +
Preference number: 5 (lower is better)
Translates to: ICPLTLGHCGFCSWE*PRNAWPAGCSLSRA
Trigger: AGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGAGTCAGGGGACAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS TCA 90 bp GCTGGCAGGGGACCAGGCACCATTTCTCCTGACAAATCCAACTTCTaGGAAGAGGCCGAGTCCTCGGTATCCATGGAGTCTGGGTGTGGG +
Preference number: 5 (lower is better)
Translates to: AGRGPGTISPDKSNF*EEAESSVSMESGCG
Trigger: CCCACACCCAGACTCCATGGATACCGAGGACTCGGCCTCTTCTCAGAAGTTGGATTTGTCAGGAGAAATGGTGCCTGGTCCCCTGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 90 bp TCACGGCCCTGCTTCCCAGAGTCCCCACACTGGTACTGTACCAACTaGGGGCTCAACAGATGTCTGGATTCTTGGGAACCACGAGAGTCG +
Preference number: 5 (lower is better)
Translates to: SRPCFPESPHWYCTN*GLNRCLDSWEPRES
Trigger: CGACTCTCGTGGTTCCCAAGAATCCAGACATCTGTTGAGCCCGCAGTTGGTACAGTACCAGTGTGGGGACTCTGGGAAGCAGGGCCGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp TGGGTCATTTGTCCCCTGACTCTTGGTCACTGTGGATTCTGCAGCTaGGAGTGCCCTCGGAATGCTTGGCCTGCTGGGTGCAGCCTTTCT +
Preference number: 5 (lower is better)
Translates to: WVICPLTLGHCGFCS*ECPRNAWPAGCSLS
Trigger: AGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGAGTCAGGGGACAAATGACCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CCA 90 bp GGTGGTGTGGTCTGCCCTCTTTCAAAGAAGCTGGGACGCTCTCTTTaGAGTCGAGTGAGTCCTCTGATGCAAAATGCAGTCGGGAAGCCT +
Preference number: 5 (lower is better)
Translates to: GGVVCPLSKKLGRSL*SRVSPLMQNAVGKP
Trigger: AGGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAGCGTCCCAGCTTCTTTGAAAGAGGGCAGACCACACCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 90 bp CTTTGGGTTAGTTGTGGTAGATCTTTGAGCAGTTCCAGGAGGCGCTaGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGAGCAGCGAGG +
Preference number: 5 (lower is better)
Translates to: LWVSCGRSLSSSRRR*RSSPRSDSKTRAAR
Trigger: CCTCGCTGCTCTTGTCTTTGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTGGAACTGCTCAAAGATCTACCACAACTAACCCAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS-3UTR CAA 90 bp AGACAATGTAACTTTACCAGGAAGCTTAAGGGGTGGCCCAGCTTCTCGGCAGGAAAATCATCCAGCTCCTaGTGTGTGTGGTGCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RQCNFTRKLKGWPSFSAGKSSSS*CVWCSS
Trigger: GGAGCTGCACCACACACACAAGGAGCTGGATGATTT...TCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp CTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTTCCAGCTGCTGGAGCTaGGGGAGCAGGTGCACAACA +
Preference number: 5 (lower is better)
Translates to: LSENMQRAWSNHIILRGASSCWS*GSRCTT
Trigger: TGTTGTGCACCTGCTCCCCAAGCTCCAGCAGCTGGA...AGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp GTCTCAAAATATGTCAATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATGACCAGGCTCTGCTaGGCCAAGGCCTCGGTGCAC +
Preference number: 5 (lower is better)
Translates to: VSKYVNVFCLKTCRGLGVMTRLC*AKASVH
Trigger: GTGCACCGAGGCCTTGGCCAAGCAGAGCCTGGTCAT...TACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATTGACATATTTTGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGGCAAGGAATGCCTCGTaGCTGTGCAGGGACCTGCAG +
Preference number: 5 (lower is better)
Translates to: QQKRELLPASTLNKEVQRARNAS*LCRDLQ
Trigger: CTGCAGGTCCCTGCACAGCAACGAGGCATTCCTTGC...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCAAAGCCTTCCGCTCGCTaGCTCTCACGGGGCGATCGT +
Preference number: 5 (lower is better)
Translates to: IILRGALENQATGPEYIPKPSAR*LSRGDR
Trigger: ACGATCGCCCCGTGAGAGCAAGCGAGCGGAAGGCTT...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp CTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTGCTGCTGGGACGCTCTCTTaGGAGTCGAGTGAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LSENMQRAWSNHIILRGAAGTLS*ESSESS
Trigger: AGAGGACTCACTCGACTCCAAAGAGAGCGTCCCAGC...AGCACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACAAGGCCTCGGTGCACTaGGCTCTGGGGTGGTGTGGT +
Preference number: 5 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYKASVH*ALGWCG
Trigger: ACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTT...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp ATCATTTTACGAGGTGCTTTAGAAAACCAAGCTACAGGTCCTGAATACATTCCACAGATGTCTGGATTCTaGGGAACCACGAGAGTCGGC +
Preference number: 5 (lower is better)
Translates to: IILRGALENQATGPEYIPQMSGF*GTTRVG
Trigger: GCCGACTCTCGTGGTTCCCAAGAATCCAGACATCTG...TGGAATGTATTCAGGACCTGTAGCTTGGTTTTCTAAAGCACCTCGTAAAATGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp CAACAGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGCAGAAGAGAGAACTCTaGCCAGCCAGTACACTCAAT +
Preference number: 5 (lower is better)
Translates to: QQKRELLPASTLNKEVQRQKREL*PASTLN
Trigger: ATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTG...CCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp AGAAGAGAGAACTCTTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGTGGGTGATCTTCTCTaGGTAAGTTCCAGGAATAGA +
Preference number: 5 (lower is better)
Translates to: RRENSCQPVHSIKKYKGAVGDLL*VSSRNR
Trigger: TCTATTCCTGGAACTTACCAAGAGAAGATCACCCAC...TGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAAGAGTTCTCTCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp GTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTAGACTAACCAAGGAGTaGCGCGAGAGATCCAAAGAT +
Preference number: 5 (lower is better)
Translates to: VLSENMQRAWSNHIILRGRLTKE*RERSKD
Trigger: ATCTTTGGATCTCTCGCGCAACTCCTTGGTTAGTCT...ACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp GTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACGAGGTCCTCTTCACACTTGTTaGAAGTCCAGCGATCTGCAA +
Preference number: 5 (lower is better)
Translates to: VLSENMQRAWSNHIILRGPLHTC*KSSDLQ
Trigger: TTGCAGATCGCTGGACTTCAAACAAGTGTGAAGAGG...ACCTCGTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp TTGCCAGCCAGTACACTCAATAAAGAAGTACAAAGGTGCAGACAATGTAACTTTACAGCCTCTTCACACTaGTTTGAAGTCCAGCGATCT +
Preference number: 5 (lower is better)
Translates to: LPASTLNKEVQRCRQCNFTASSH*FEVQRS
Trigger: AGATCGCTGGACTTCAAACAAGTGTGAAGAGGCTGT...AAAGTTACATTGTCTGCACCTTTGTACTTCTTTATTGAGTGTACTGGCTGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS-3UTR CAA 90 bp AATGTGTTCTGTCTGAAAACATGCAGAGGGCTTGGAGTAATCATATCATTTTACATGACAAGATGTGTCTaGCCTGAGCAAGGAATGCCT +
Preference number: 5 (lower is better)
Translates to: NVFCLKTCRGLGVIISFYMTRCV*PEQGMP
Trigger: AGGCATTCCTTGCTCAGGCAAGACACATCTTGTCAT...GTAAAATGATATGATTACTCCAAGCCCTCTGCATGTTTTCAGACAGAACACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp GGGCGGAGCTCCCAGCCAGCATGGTCCGCTGAGGGCTaGGGGGCGGTCTCCGAGGCCCCTCAACAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: GRSSQPAWSAEG*GAVSEAPQQRS
Trigger: GCTTCTCTGTTGAGGGGCCTCGGAGACCGCCCCCCAGCCCTCAGCGGACCATGCTGGCTGGGAGCTCCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS GCA 72 bp AGCTCCGCCGTCACCTCGCTCATCTCCCGGGCGTGCTaGTGCTGCTGCTCAGCAAGGCGGCTTTGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: SSAVTSLISRAC*CCCSARRLCRD
Trigger: GTCCCTGCAAAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp GGGGGCACGGGAGGCCTCTGGCTCCGCTCCGTACAGTaGCGGAAGCTCTCCACAGAGCTGGCTCCAAGGCAT +
Preference number: 6 (lower is better)
Translates to: GGTGGLWLRSVQ*RKLSTELAPRH
Trigger: ATGCCTTGGAGCCAGCTCTGTGGAGAGCTTCCGCCACTGTACGGAGCGGAGCCAGAGGCCTCCCGTGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp ATCCATGGAGTCTGGGTGTGGGGTGAAGTACGTGTGTaGCCTGGGGGCACGGGAGGCCTCTGGCTCCGCTCC +
Preference number: 6 (lower is better)
Translates to: IHGVWVWGEVRV*PGGTGGLWLRS
Trigger: GGAGCGGAGCCAGAGGCCTCCCGTGCCCCCAGGCCACACACGTACTTCACCCCACACCCAGACTCCATGGAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp GCTCCCGGGAGGCCTGCCGAGGTCCCACTCGCACTCTaGAATGAGGTTCAGGACTGCCTCGTCATCCGCATC +
Preference number: 6 (lower is better)
Translates to: APGRPAEVPLAL*NEVQDCLVIRI
Trigger: GATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTCGGCAGGCCTCCCGGGAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp GCCGTCACCTCGCTCATCTCCCGGGCGTGCTGCTGCTaGTGCTCAGCAAGGCGGCTTTGCAGGGACTTACTC +
Preference number: 6 (lower is better)
Translates to: AVTSLISRACCC*CSARRLCRDLL
Trigger: GAGTAAGTCCCTGCAAAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp TCCGCCGTCACCTCGCTCATCTCCCGGGCGTGCTGCTaGTGCTGCTCAGCAAGGCGGCTTTGCAGGGACTTA +
Preference number: 6 (lower is better)
Translates to: SAVTSLISRACC*CCSARRLCRDL
Trigger: TAAGTCCCTGCAAAGCCGCCTTGCTGAGCAGCAGCAGCAGCACGCCCGGGAGATGAGCGAGGTGACGGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp TCGGCTCTGTGCTGCGCCCGCACCTGGCTCAGCTCCTaGAGCAGGTGTTCATTGGTGCTGACCAGGGAGCTG +
Preference number: 6 (lower is better)
Translates to: SALCCARTWLSS*SRCSLVLTREL
Trigger: CAGCTCCCTGGTCAGCACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGTGCGGGCGCAGCACAGAGCCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000512038.1
CDS GCA 72 bp AGCTGGGAGTGCCCTCGGAATGCTTGGCCTGCTGGGTaGAGCCTTTCTCGCGCTGTCCAGAGGCTTCCCTGG +
Preference number: 6 (lower is better)
Translates to: SWECPRNAWPAG*SLSRAVQRLPW
Trigger: CCAGGGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CCA 72 bp CTGCAGCTGGGAGTGCCCTCGGAATGCTTGGCCTGCTaGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: LQLGVPSECLAC*VQPFSRCPEAS
Trigger: GGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS TCA 72 bp TGTCTGCTCAGGCTCTCCTTGGGCACGGAGGACCCATaGGTTCTCTCCGGGCAGCCCAAACCCTCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: CLLRLSLGTEDP*VLSGQPKPSWS
Trigger: GGACCAGGAGGGTTTGGGCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp AGGACTGCCTCGTCATCCGCATCCATGACCAGGCTCTaGTTGGCCAAGGCCTCGGTGCACTTGGCTCTGGGG +
Preference number: 6 (lower is better)
Translates to: RTASSSASMTRL*LAKASVHLALG
Trigger: CCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAGCCTGGTCATGGATGCGGATGACGAGGCAGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp ATCTGCTCCACCTCGGCTCTGTGCTGCGCCCGCACCTaGCTCAGCTCCTGCAGCAGGTGTTCATTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: ICSTSALCCART*LSSCSRCSLVL
Trigger: CAGCACCAATGAACACCTGCTGCAGGAGCTGAGCCAGGTGCGGGCGCAGCACAGAGCCGAGGTGGAGCAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000512038.1
CDS CAA 72 bp ACTGCCTCGTCATCCGCATCCATGACCAGGCTCTGCTaGGCCAAGGCCTCGGTGCACTTGGCTCTGGGGTGG +
Preference number: 6 (lower is better)
Translates to: TASSSASMTRLC*AKASVHLALGW
Trigger: CCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAGCCTGGTCATGGATGCGGATGACGAGGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp ATTCTGCAGCTGGGAGTGCCCTCGGAATGCTTGGCCTaGTGGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCT +
Preference number: 6 (lower is better)
Translates to: ILQLGVPSECLA*WVQPFSRCPEA
Trigger: AGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CCA 72 bp TGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATGCTTaGCCTGCTGGGTGCAGCCTTTCTCGCGCTGTCCAG +
Preference number: 6 (lower is better)
Translates to: CGFCSWECPRNA*PAGCSLSRAVQ
Trigger: CTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CAA 72 bp CTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATGCTaGGCCTGCTGGGTGCAGCCTTTCTCGCGCTGTCCA +
Preference number: 6 (lower is better)
Translates to: LWILQLGVPSEC*ACWVQPFSRCP
Trigger: TGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CAA 90 bp TCCGCATCCATGACCAGGCTCTGCTTGGCCAAGGCCTCGGTGCACTaGGCTCTGGGGTGGTGTGGTCTGCCCTCTTTCAAAGAAGCTGGG +
Preference number: 6 (lower is better)
Translates to: SASMTRLCLAKASVH*ALGWCGLPSFKEAG
Trigger: CCCAGCTTCTTTGAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAGCCTGGTCATGGATGCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CAA 90 bp TCTTGGTCACTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATGCTaGGCCTGCTGGGTGCAGCCTTTCTCGCGCTGTCCAGAGGCTTCC +
Preference number: 6 (lower is better)
Translates to: SWSLWILQLGVPSEC*ACWVQPFSRCPEAS
Trigger: GGAAGCCTCTGGACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS GCA 72 bp TCCAAGGCATCTTCTCCAGACAGCACCCTCTGCAGCTaGTCCTCCTCGTCTCACGGCCCTGCTTCCCAGAGT +
Preference number: 6 (lower is better)
Translates to: SKASSPDSTLCS*SSSSHGPASQS
Trigger: ACTCTGGGAAGCAGGGCCGTGAGACGAGGAGGAGCAGCTGCAGAGGGTGCTGTCTGGAGAAGATGCCTTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp AGGTCCTCCCGTTCCTGCTTTCTGAGCTGTCCTGTCTaGTCAGGCTCTCCTTGGGCACGGAGGACCCATGAG +
Preference number: 6 (lower is better)
Translates to: RSSRSCFLSCPV*SGSPWARRTHE
Trigger: CTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp CCGAGGCCTCAGGCTGAGACAAGGTCCTCCCGTTCCTaGTTTCTGAGCTGTCCTGTCTGCTCAGGCTCTCCT +
Preference number: 6 (lower is better)
Translates to: PRPQAETRSSRS*FLSCPVCSGSP
Trigger: AGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAGGCCTCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp TCAAAGACAAGAGCAGCGAGGAGGCCGTTCGCGAGGTaGACAGGCTCATCGAGGGCAAGGCGCCCATCATCT +
Preference number: 6 (lower is better)
Translates to: SKTRAARRPFAR*TGSSRARRPSS
Trigger: AGATGATGGGCGCCTTGCCCTCGATGAGCCTGTGCACCTCGCGAACGGCCTCCTCGCTGCTCTTGTCTTTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS GCA 72 bp TCACTGTGGATTCTGCAGCTGGGAGTGCCCTCGGAATaGTTGGCCTGCTGGGTGCAGCCTTTCTCGCGCTGT +
Preference number: 6 (lower is better)
Translates to: SLWILQLGVPSE*LACWVQPFSRC
Trigger: ACAGCGCGAGAAAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CCA 72 bp GGCTCTGCTTGGCCAAGGCCTCGGTGCACTTGGCTCTaGGGTGGTGTGGTCTGCCCTCTTTCAAAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: GSAWPRPRCTWL*GGVVCPLSKKL
Trigger: CAGCTTCTTTGAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp TGCTTTCTGAGCTGTCCTGTCTGCTCAGGCTCTCCTTaGGCACGGAGGACCCATGAGTTCTCTCCGGGCAGC +
Preference number: 6 (lower is better)
Translates to: CFLSCPVCSGSP*ARRTHEFSPGS
Trigger: GCTGCCCGGAGAGAACTCATGGGTCCTCCGTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp TGTCCCCTGACTCTTGGTCACTGTGGATTCTGCAGCTaGGAGTGCCCTCGGAATGCTTGGCCTGCTGGGTGC +
Preference number: 6 (lower is better)
Translates to: CPLTLGHCGFCS*ECPRNAWPAGC
Trigger: GCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGAGTCAGGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CAA 72 bp CTGATGCAAAATGCAGTCGGGAAGCCTTCCGCTCGCTaGCTCTCACGGGGCGATCGTCCAGCTGCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: LMQNAVGKPSAR*LSRGDRPAAGA
Trigger: AGCTCCAGCAGCTGGACGATCGCCCCGTGAGAGCAAGCGAGCGGAAGGCTTCCCGACTGCATTTTGCATCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000625371.1
CDS TCA 72 bp CTCAGGCTGAGACAAGGTCCTCCCGTTCCTGCTTTCTaGGCTGTCCTGTCTGCTCAGGCTCTCCTTGGGCAC +
Preference number: 6 (lower is better)
Translates to: LRLRQGPPVPAF*AVLSAQALLGH
Trigger: GTGCCCAAGGAGAGCCTGAGCAGACAGGACAGCTCAGAAAGCAGGAACGGGAGGACCTTGTCTCAGCCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp CTGACTCTTGGTCACTGTGGATTCTGCAGCTGGGAGTaGCCTCGGAATGCTTGGCCTGCTGGGTGCAGCCTT +
Preference number: 6 (lower is better)
Translates to: LTLGHCGFCSWE*PRNAWPAGCSL
Trigger: AAGGCTGCACCCAGCAGGCCAAGCATTCCGAGGGCACTCCCAGCTGCAGAATCCACAGTGACCAAGAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CAA 72 bp ATGACCAGGCTCTGCTTGGCCAAGGCCTCGGTGCACTaGGCTCTGGGGTGGTGTGGTCTGCCCTCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: MTRLCLAKASVH*ALGWCGLPSFK
Trigger: TTTGAAAGAGGGCAGACCACACCACCCCAGAGCCAAGTGCACCGAGGCCTTGGCCAAGCAGAGCCTGGTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp GAGGTCCCACTCGCACTCTGCAATGAGGTTCAGGACTaGCTCGTCATCCGCATCCATGACCAGGCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: EVPLALCNEVQD*LVIRIHDQALL
Trigger: AAGCAGAGCCTGGTCATGGATGCGGATGACGAGGCAGTCCTGAACCTCATTGCAGAGTGCGAGTGGGACCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp AGCCGGAAGTCCACATCCACGAGCTCGGTTAAGGCGTaGAGCCGAAACACTTCTGCCAACGAGGAGATGCAG +
Preference number: 6 (lower is better)
Translates to: SRKSTSTSSVKA*SRNTSANEEMQ
Trigger: CTGCATCTCCTCGTTGGCAGAAGTGTTTCGGCTCCACGCCTTAACCGAGCTCGTGGATGTGGACTTCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000625371.1
CDS CCA 72 bp TCCGGGCAGCCCAAACCCTCCTGGTCCGAAAACGTCTaGAATCTTCCAACAGGCATTCTTCGCTTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: SGQPKPSWSENV*NLPTGILRFLH
Trigger: GTGCAGGAAGCGAAGAATGCCTGTTGGAAGATTCCAGACGTTTTCGGACCAGGAGGGTTTGGGCTGCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS CCA 72 bp TGCAGACAATGTAACTTTACCAGGAAGCTTAAGGGGTaGCCCAGCTTCTCGGCAGGAGTCAGCAGGCCTGGC +
Preference number: 6 (lower is better)
Translates to: CRQCNFTRKLKG*PSFSAGVSRPG
Trigger: GCCAGGCCTGCTGACTCCTGCCGAGAAGCTGGGCCACCCCTTAAGCTTCCTGGTAAAGTTACATTGTCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000512038.1
CDS CAA 90 bp GGGTGGTGTGGTCTGCCCTCTTTCAAAGAAGCTGGGACGCTCTCTTaGGAGTCGAGTGAGTCCTCTGATGCAAAATGCAGTCGGGAAGCC +
Preference number: 6 (lower is better)
Translates to: GWCGLPSFKEAGTLS*ESSESSDAKCSREA
Trigger: GGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAGCGTCCCAGCTTCTTTGAAAGAGGGCAGACCACACCACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS GCA 72 bp CTCTCTTTGGAGTCGAGTGAGTCCTCTGATGCAAAATaGAGTCGGGAAGCCTTCCGCTCGCTTGCTCTCACG +
Preference number: 6 (lower is better)
Translates to: LSLESSESSDAK*SREAFRSLALT
Trigger: CGTGAGAGCAAGCGAGCGGAAGGCTTCCCGACTGCATTTTGCATCAGAGGACTCACTCGACTCCAAAGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000625371.1
CDS GCA 72 bp CGGCAGACGTGGTCATACACAACTAGCAGTCGGGCCTaGGGGTACCACCACTTTGGAACAGTTGGGAATTTC +
Preference number: 6 (lower is better)
Translates to: RQTWSYTTSSRA*GYHHFGTVGNF
Trigger: GAAATTCCCAACTGTTCCAAAGTGGTGGTACCCGCAGGCCCGACTGCTAGTTGTGTATGACCACGTCTGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000499639.2
ENST00000514507.1
CDS GCA 72 bp TGCTTCCCAGAGTCCCCACACTGGTACTGTACCAACTaGGGGCTCAACAGATGTCTGGATTCTTGGGAACCA +
Preference number: 6 (lower is better)
Translates to: CFPESPHWYCTN*GLNRCLDSWEP
Trigger: TGGTTCCCAAGAATCCAGACATCTGTTGAGCCCGCAGTTGGTACAGTACCAGTGTGGGGACTCTGGGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS TCA 72 bp GGACCAGGCACCATTTCTCCTGACAAATCCAACTTCTaGGAAGAGGCCGAGTCCTCGGTATCCATGGAGTCT +
Preference number: 6 (lower is better)
Translates to: GPGTISPDKSNF*EEAESSVSMES
Trigger: AGACTCCATGGATACCGAGGACTCGGCCTCTTCTCAGAAGTTGGATTTGTCAGGAGAAATGGTGCCTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS TCA 72 bp CGGAGTGAAGGTGCTAACACTTCAGGCAATGGGTGCTaGAAACATGGACCGGCAGACGTGGTCATACACAAC +
Preference number: 6 (lower is better)
Translates to: RSEGANTSGNGC*KHGPADVVIHN
Trigger: GTTGTGTATGACCACGTCTGCCGGTCCATGTTTTCAGCACCCATTGCCTGAAGTGTTAGCACCTTCACTCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000499639.2
ENST00000514507.1
CDS CAA 90 bp CGTGGTCATACACAACTAGCAGTCGGGCCTGCGGGTACCACCACTTaGGAACAGTTGGGAATTTCTAGTAAACCAGGAAGCTTAAGGGGT +
Preference number: 6 (lower is better)
Translates to: RGHTQLAVGPAGTTT*EQLGISSKPGSLRG
Trigger: ACCCCTTAAGCTTCCTGGTTTACTAGAAATTCCCAACTGTTCCAAAGTGGTGGTACCCGCAGGCCCGACTGCTAGTTGTGTATGACCACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000499639.2
CDS CCA 72 bp AGTTGTGGTAGATCTTTGAGCAGTTCCAGGAGGCGCTaGAGGAGCTCGCCAAGAAGCGATTCAAAGACAAGA +
Preference number: 6 (lower is better)
Translates to: SCGRSLSSSRRR*RSSPRSDSKTR
Trigger: TCTTGTCTTTGAATCGCTTCTTGGCGAGCTCCTCCAGCGCCTCCTGGAACTGCTCAAAGATCTACCACAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1
CDS CAA 72 bp ACACAACTAGCAGTCGGGCCTGCGGGTACCACCACTTaGGAACAGTTGGGAATTTCTAGTAAACCAGGAAGC +
Preference number: 6 (lower is better)
Translates to: TQLAVGPAGTTT*EQLGISSKPGS
Trigger: GCTTCCTGGTTTACTAGAAATTCCCAACTGTTCCAAAGTGGTGGTACCCGCAGGCCCGACTGCTAGTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000499639.2
CDS TCA 72 bp CTTCTGCCAACGAGGAGATGCAGTTGTAGTAGAGATTaGGACTCTCCAATGCAGTCAGGTACTGAATGCCCT +
Preference number: 6 (lower is better)
Translates to: LLPTRRCSCSRD*DSPMQSGTECP
Trigger: AGGGCATTCAGTACCTGACTGCATTGGAGAGTCTCAATCTCTACTACAACTGCATCTCCTCGTTGGCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000625371.1
CDS TCA 72 bp AGAGCTGTCCTGAGCTGCTGTGAATTCTTCAACAGATaGCAAGATGTGTCTTGCCTGAGCAAGGAATGCCTC +
Preference number: 6 (lower is better)
Translates to: RAVLSCCEFFNR*QDVSCLSKECL
Trigger: GAGGCATTCCTTGCTCAGGCAAGACACATCTTGTCATCTGTTGAAGAATTCACAGCAGCTCAGGACAGCTCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264935.6
CDS TCA 72 bp CAGAGGGTTCCTTCTGCATACTTGGGAGTCACGATGTaGAAGGCAGTAATTCAGTTTCACGGTACATCTCCC +
Preference number: 6 (lower is better)
Translates to: QRVPSAYLGVTM*KAVIQFHGTSP
Trigger: GGGAGATGTACCGTGAAACTGAATTACTGCCTTTCACATCGTGACTCCCAAGTATGCAGAAGGAACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000512038.1
CDS CCA 72 bp CACTTGTTTGAAGTCCAGCGATCTGCAAATTTAACGTaGCTGCAGTGTCTGCACTCTTCACTTCCTTTTTCA +
Preference number: 6 (lower is better)
Translates to: HLFEVQRSANLT*LQCLHSSLPFS
Trigger: TGAAAAAGGAAGTGAAGAGTGCAGACACTGCAGCCACGTTAAATTTGCAGATCGCTGGACTTCAAACAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264935.6
ENST00000512038.1
CDS CAA 72 bp AGTCTTCTGACTCTGTTCTCATTTCTTGAAATCGTTTaGGCTATTCTAGGCCCTCTGCTCACTGACTTCTGG +
Preference number: 6 (lower is better)
Translates to: SLLTLFSFLEIV*AILGPLLTDFW
Trigger: CCAGAAGTCAGTGAGCAGAGGGCCTAGAATAGCCAAAACGATTTCAAGAAATGAGAACAGAGTCAGAAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514507.1