RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP68 (Homo sapiens)

Ensembl gene IDs: ENSG00000011523

Ensembl transcript IDs: ENST00000260569.4, ENST00000377990.7, ENST00000475851.1, ENST00000497039.1, ENST00000537589.1

Found 533 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTTCAGTTTCTGTACTTACTGTGTCATCCTATCCGTTCCCTTCCCTaGGCCTGGACTGCTCTTCCAAGGGAGACTAGGAGTGAAGGGAGG +
Preference number: 1 (lower is better)
Translates to: LQFLYLLCHPIRSLP*AWTALPRETRSEGR
Trigger: CCTCCCTTCACTCCTAGTCTCCCTTGGAAGAGCAGTCCAGGCTCAGGGAAGGGAACGGATAGGATGACACAGTAAGTACAGAAACTGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR GCA 90 bp GTAAAGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTaGAGTCCCGTGGTCAGTAACATCTGCAACATTATACAGCCAGCA +
Preference number: 1 (lower is better)
Translates to: VKLQRRLETCKIGPG*SPVVSNICNIIQPA
Trigger: TGCTGGCTGTATAATGTTGCAGATGTTACTGACCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 90 bp AGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTaGTCAGTAACATCTGCAACATTATACAGCCAGCAGATCAGCTCT +
Preference number: 1 (lower is better)
Translates to: REDLRLVRLDLAAVP*SVTSATLYSQQISS
Trigger: AGAGCTGATCTGCTGGCTGTATAATGTTGCAGATGTTACTGACCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR TCA 90 bp CACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTCCATTTGCTaGGCTTACCTATGGATCTCCAAGAACCCAGATCTTGAAACTGCT +
Preference number: 1 (lower is better)
Translates to: HLSFKIAVLTSSSIC*AYLWISKNPDLETA
Trigger: AGCAGTTTCAAGATCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAACACGGCTATTTTGAAGCTTAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CCA 90 bp TCTACCTGGGTCTCATTCTTGGCTCAAGCCCTTGCTAATTATAAGTaGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAAAAGTA +
Preference number: 1 (lower is better)
Translates to: STWVSFLAQALANYK*ARYLTSLCSFLQKV
Trigger: TACTTTTTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAGGGCTTGAGCCAAGAATGAGACCCAGGTAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR TCA 90 bp GTACATCCAATGCCCCTAACTTTGCACTTAAACCACTGTGGCAAATaGAGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGT +
Preference number: 1 (lower is better)
Translates to: VHPMPLTLHLNHCGK*SSRSPAVKKATYLC
Trigger: ACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCTTCATTTGCCACAGTGGTTTAAGTGCAAAGTTAGGGGCATTGGATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 90 bp TTATACCTCCAGATATTAAGTCATTTGGTTCACAAGATGGTCCGGTaGCCACAAAGTCTAGGCAACAGTACATCCAATGCCCCTAACTTT +
Preference number: 1 (lower is better)
Translates to: LYLQILSHLVHKMVR*PQSLGNSTSNAPNF
Trigger: AAAGTTAGGGGCATTGGATGTACTGTTGCCTAGACTTTGTGGCCACCGGACCATCTTGTGAACCAAATGACTTAATATCTGGAGGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR TCA 90 bp TGTCAATGCCAAAGCAACGAAGAATTCCCCTTTTTCCTTCACTATTaGCAGCTTCAGTTTCTGTACTTACTGTGTCATCCTATCCGTTCC +
Preference number: 1 (lower is better)
Translates to: CQCQSNEEFPFFLHY*QLQFLYLLCHPIRS
Trigger: GGAACGGATAGGATGACACAGTAAGTACAGAAACTGAAGCTGTCAATAGTGAAGGAAAAAGGGGAATTCTTCGTTGCTTTGGCATTGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CCA 90 bp TTAGTTTCCATTGTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATaGCCCAACAGAACTTTAAAAGTGCTTTTCTGTAGAATCTGCAGT +
Preference number: 1 (lower is better)
Translates to: LVSIVTVLSSFQVHS*PNRTLKVLFCRICS
Trigger: ACTGCAGATTCTACAGAAAAGCACTTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAACAATGGAAACTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR GCA 90 bp TTTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATaGCTTAAGATTTGCTTCTATGTATACGCCAATAAATGTGGTTCT +
Preference number: 1 (lower is better)
Translates to: FPHGSKDWDLQQISA*LKICFYVYANKCGS
Trigger: AGAACCACATTTATTGGCGTATACATAGAAGCAAATCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CCA 90 bp GAACAAAAATATCTTAGATCATCTCTAGGTAAGGTAGTACTTTCTTaGGAAACAGGGTATTGTGTAACATTCTGTGCAAATTCCTGTCAG +
Preference number: 1 (lower is better)
Translates to: EQKYLRSSLGKVVLS*ETGYCVTFCANSCQ
Trigger: CTGACAGGAATTTGCACAGAATGTTACACAATACCCTGTTTCCCAAGAAAGTACTACCTTACCTAGAGATGATCTAAGATATTTTTGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAGCTAGGACACGTTCCTaGACAGGCACATTCCTGAAC +
Preference number: 2 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNEARTRS*TGTFLN
Trigger: GTTCAGGAATGTGCCTGTCCAGGAACGTGTCCTAGC...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR TCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGCCTCTGCCAAAGCAATaGAAACCACAGCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWPLPKQ*KPQPGV
Trigger: CACACCAGGCTGTGGTTTTCATTGCTTTGGCAGAGG...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACGCCTCCCGGGTTCATaGCATTCTCATGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRRLPGS*HSHASA
Trigger: GGCTGAGGCATGAGAATGGCATGAACCCGGGAGGCG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACAACATGTCTGGGAATaGACCGAAGCCCTCAACATG +
Preference number: 2 (lower is better)
Translates to: WSSPEEACLPWKPILGSAQHVWE*TEALNM
Trigger: CATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTG...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGAACCTTCAACATGTCTaGGAATGCACCGAAGCCCTC +
Preference number: 2 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWNLQHV*ECTEAL
Trigger: GAGGGCTTCGGTGCATTCCCAGACATGTTGAAGGTT...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGATCTCCTGACCTTGTaGTCCACCCGCCTCGGCCTC +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILDLLTL*STRLGL
Trigger: GAGGCCGAGGCGGGTGGATCACAAGGTCAGGAGATC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTCCTGGGTCTCATTCTTaGCTCAAGCCCTTGCTAATT +
Preference number: 2 (lower is better)
Translates to: ARARTAYYPVKLQRRLETPGSHS*LKPLLI
Trigger: AATTAGCAAGGGCTTGAGCCAAGAATGAGACCCAGG...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CCA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAACTAGAATCAGCATCTTaGAGCCAGATACGTCCATGT +
Preference number: 2 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNELESAS*SQIRPC
Trigger: ACATGGACGTATCTGGCTCCAAGATGCTGATTCTAG...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAATGGTCTCGATCTCCTaGCCTTGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILMVSIS*PCDPPA
Trigger: GGCGGGTGGATCACAAGGTCAGGAGATCGAGACCAT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAGGCATGAGCCACCGTaGCCAGCCTTCAGCTTGAGT +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILRHEPP*PAFSLS
Trigger: ACTCAAGCTGAAGGCTGGGCACGGTGGCTCATGCCT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACGCCTCCCGGGTTCATaGCATTCTCATGCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRRLPGS*HSHASA
Trigger: GGCTGAGGCATGAGAATGGCATGAACCCGGGAGGCG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAATGGAAACCAATTCTTaGATCAGCACCATTACTAAC +
Preference number: 2 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNEMETNS*ISTITN
Trigger: GTTAGTAATGGTGCTGATCCAAGAATTGGTTTCCAT...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAATGGTCTCGATCTCCTaGCCTTGTGATCCACCCGCC +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRMVSIS*PCDPPA
Trigger: GGCGGGTGGATCACAAGGTCAGGAGATCGAGACCAT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTGCTGATCCAGCTTTaGGTATCATCACTTCCCTGT +
Preference number: 2 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLLIQL*VSSLPC
Trigger: ACAGGGAAGTGATGATACTCAAAGCTGGATCAGCAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp TTTATCAGTAAAGAGGGGTCCATGATAACGTGTCCTACCTACCTCACAAGACAAGGACAGGCACATTCCTaGACCTTCAACATGTCTGGG +
Preference number: 2 (lower is better)
Translates to: FISKEGSMITCPTYLTRQGQAHS*TFNMSG
Trigger: CCCAGACATGTTGAAGGTTCAGGAATGTGCCTGTCC...TTGTCTTGTGAGGTAGGTAGGACACGTTATCATGGACCCCTCTTTACTGATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR GCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGTTCCAAAGACAGCAGTaGCATGTTTCAAATTCAGAT +
Preference number: 2 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWFQRQQ*HVSNSD
Trigger: ATCTGAATTTGAAACATGGCACTGCTGTCTTTGGAA...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCACTAGCCAGTGTTTaGCCGACAGGTTGCACCTCT +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSLASV*PTGCTS
Trigger: AGAGGTGCAACCTGTCGGCCAAACACTGGCTAGTGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGCTACACGCTCTTTGTaGAGAAGCACCAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRATRSL*RSTKRK
Trigger: TTTCCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 90 bp GTTATTCCAGTGTGGCATCACAGTGCAGTTAGCAAGCTCAGCTACTaGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCA +
Preference number: 2 (lower is better)
Translates to: VIPVWHHSAVSKLSY*TLIWPCLLIEMLLA
Trigger: TGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAGTAGCTGAGCTTGCTAACTGCACTGTGATGCCACACTGGAATAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 90 bp CCCTATTCCACGCAGTGTTCTTTATACCTCCAGATATTAAGTCATTaGGTTCACAAGATGGTCCGGTGGCCACAAAGTCTAGGCAACAGT +
Preference number: 2 (lower is better)
Translates to: PYSTQCSLYLQILSH*VHKMVRWPQSLGNS
Trigger: ACTGTTGCCTAGACTTTGTGGCCACCGGACCATCTTGTGAACCAAATGACTTAATATCTGGAGGTATAAAGAACACTGCGTGGAATAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR GCA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTATACCTAACCTCTCTCTaGTCTTTCCTCCAAAAAGTA +
Preference number: 2 (lower is better)
Translates to: PEEACLPWKPILGSAPLLYLTSL*SFLQKV
Trigger: TACTTTTTGGAGGAAAGAGCAGAGAGAGGTTAGGTA...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTCTCTTAGGTCCTCTTaGATGCCTGAGAATATTGAG +
Preference number: 2 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVSLRSS*MPENIE
Trigger: CTCAATATTCTCAGGCATGCAAGAGGACCTAAGAGA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAATGACCCTACCAGGTaGAATAGTTTGAGCTTTATC +
Preference number: 2 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVNDPTR*NSLSFI
Trigger: GATAAAGCTCAAACTATTCCACCTGGTAGGGTCATT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAAGGTAGTACTTTCTTaGGAAACAGGGTATTGTGTA +
Preference number: 2 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRKVVLS*ETGYCV
Trigger: TACACAATACCCTGTTTCCCAAGAAAGTACTACCTT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 90 bp GTGTCAATGCCAAAGCAACGAAGAATTCCCCTTTTTCCTTCACTATaGACAGCTTCAGTTTCTGTACTTACTGTGTCATCCTATCCGTTC +
Preference number: 2 (lower is better)
Translates to: VSMPKQRRIPLFPSL*TASVSVLTVSSYPF
Trigger: GAACGGATAGGATGACACAGTAAGTACAGAAACTGAAGCTGTCAATAGTGAAGGAAAAAGGGGAATTCTTCGTTGCTTTGGCATTGACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAAGCTGATTATTAGTTaGATGGGAATAGAATGCCAC +
Preference number: 2 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVKLIIS*MGIECH
Trigger: GTGGCATTCTATTCCCATTCAACTAATAATCAGCTT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAGCATCTTACTAGGCTaGAACAATTTCAGCTTGATT +
Preference number: 2 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVSILLG*NNFSLI
Trigger: AATCAAGCTGAAATTGTTTCAGCCTAGTAAGATGCT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCTCTTAGGTCCTCTTaGATGCCTGAGAATATTGAG +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSLRSS*MPENIE
Trigger: CTCAATATTCTCAGGCATGCAAGAGGACCTAAGAGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAGGCACTTGAAATACTaGATTTTATGTGTAGCTACT +
Preference number: 2 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRRHLKY*ILCVAT
Trigger: AGTAGCTACACATAAAATGCAGTATTTCAAGTGCCT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGACTTCAGTGTTGAATaGCTCTTGCAAGGACTTCTT +
Preference number: 2 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKDFSVE*LLQGLL
Trigger: AAGAAGTCCTTGCAAGAGCCATTCAACACTGAAGTC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAAGGTAGTACTTTCTTaGGAAACAGGGTATTGTGTA +
Preference number: 2 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVKVVLS*ETGYCV
Trigger: TACACAATACCCTGTTTCCCAAGAAAGTACTACCTT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACCAGGTGGAATAGTTTaGGCTTTATCTGCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILPGGIV*ALSALF
Trigger: AAAAAGAGCAGATAAAGCTCAAACTATTCCACCTGG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGTTACCAGCAATAACTaGTCATCTTGCTGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILVTSNN*SSCCKK
Trigger: CTTTTTGCAGCAAGATGATCAGTTATTGCTGGTAAC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGTTACCAGCAATAACTaGTCATCTTGCTGCAAAAAG +
Preference number: 2 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKVTSNN*SSCCKK
Trigger: CTTTTTGCAGCAAGATGATCAGTTATTGCTGGTAAC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGCTACACGCTCTTTGTaGAGAAGCACCAAAAGGAAA +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRATRSL*RSTKRK
Trigger: TTTCCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAATGACCCTACCAGGTaGAATAGTTTGAGCTTTATC +
Preference number: 2 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKNDPTR*NSLSFI
Trigger: GATAAAGCTCAAACTATTCCACCTGGTAGGGTCATT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 90 bp TTTCCTATTCTTCGACCTTGGATTGAATTTCCCTTAGCCTACATCTaGCCTTTCCAGCATATCTTACCTCAAACCTTCTTTGTGTTCCAT +
Preference number: 2 (lower is better)
Translates to: FPILRPWIEFPLAYI*PFQHILPQTFFVFH
Trigger: ATGGAACACAAAGAAGGTTTGAGGTAAGATATGCTGGAAAGGCAAGATGTAGGCTAAGGGAAATTCAATCCAAGGTCGAAGAATAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 90 bp AAACCAATTCTTGGATCAGCACCATTACTAACTAGAATCAGCATCTaGGAGCCAGATACGTCCATGTTTCTCTGGAAAAGTGAACGTAAA +
Preference number: 2 (lower is better)
Translates to: KPILGSAPLLTRISI*EPDTSMFLWKSERK
Trigger: TTTACGTTCACTTTTCCAGAGAAACATGGACGTATCTGGCTCCAAGATGCTGATTCTAGTTAGTAATGGTGCTGATCCAAGAATTGGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACAGCTGCACACTCTGTaGAATCCTTTCAGAATGATA +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRQLHTL*NPFRMI
Trigger: TATCATTCTGAAAGGATTTCACAGAGTGTGCAGCTG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGTACTTATGTGTCAATaGCAAAGCAACGAAGAATTC +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILVLMCQ*QSNEEF
Trigger: GAATTCTTCGTTGCTTTGGCATTGACACATAAGTAC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTTCCATTGTTACTGTaGTTTCCTCCTTCCAGGTTC +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRFPLLL*FPPSRF
Trigger: GAACCTGGAAGGAGGAAAGCACAGTAACAATGGAAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGACTTCAGTGTTGAATaGCTCTTGCAAGGACTTCTT +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRDFSVE*LLQGLL
Trigger: AAGAAGTCCTTGCAAGAGCCATTCAACACTGAAGTC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTCCAGGTTCATTCATaGCCCAACAGAACTTTAAAA +
Preference number: 2 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFQVHS*PNRTLK
Trigger: TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGCCCATCACCACGCCTaGCTAATTTCTTTTTGTATT +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRAHHHA*LISFCI
Trigger: AATACAAAAAGAAATTAGCCAGGCGTGGTGATGGGC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACCTATTCTTCGACCTTaGATTGAATTTCCCTTAGCC +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRPILRP*IEFPLA
Trigger: GGCTAAGGGAAATTCAATCCAAGGTCGAAGAATAGG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACCAGGTGGAATAGTTTaGGCTTTATCTGCTCTTTTT +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRPGGIV*ALSALF
Trigger: AAAAAGAGCAGATAAAGCTCAAACTATTCCACCTGG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGCATCTTACTAGGCTaGAACAATTTCAGCTTGATT +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSILLG*NNFSLI
Trigger: AATCAAGCTGAAATTGTTTCAGCCTAGTAAGATGCT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTAGGTCCTCTTGCATaGCTGAGAATATTGAGTATT +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLGPLA*LRILSI
Trigger: AATACTCAATATTCTCAGGCATGCAAGAGGACCTAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTAAATCTAAGCAGCTaGACACTCTGTGAAATCCTT +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLNLSS*TLCEIL
Trigger: AAGGATTTCACAGAGTGTGCAGCTGCTTAGATTTAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTCCAGGTTCATTCATaGCCCAACAGAACTTTAAAA +
Preference number: 2 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRFQVHS*PNRTLK
Trigger: TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGACCAATGCCCCTAACTTaGCACTTAAACCACTGTGGC +
Preference number: 3 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGPMPLT*HLNHCG
Trigger: GCCACAGTGGTTTAAGTGCAAAGTTAGGGGCATTGG...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR TCA 72 bp CAAGCGCTAGGACACGTTCCTGGACAGGCACATTCCTaGACCTTCAACATGTCTGGGAATGCACCGAAGCCC +
Preference number: 3 (lower is better)
Translates to: QALGHVPGQAHS*TFNMSGNAPKP
Trigger: GGGCTTCGGTGCATTCCCAGACATGTTGAAGGTTCAGGAATGTGCCTGTCCAGGAACGTGTCCTAGCGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR GCA 72 bp GCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTaGCATGGAAACCAATTCTTGGATCAGCACCATTAC +
Preference number: 3 (lower is better)
Translates to: AGRNGAAQKRRA*HGNQFLDQHHY
Trigger: GTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 72 bp CTCAAGCAATCTTCCTGTCTCAGCTTCCAGAGTAGCTaGGATAAAAGACTTGTCCCACTGCACCTGCCAGCC +
Preference number: 3 (lower is better)
Translates to: LKQSSCLSFQSS*DKRLVPLHLPA
Trigger: GGCTGGCAGGTGCAGTGGGACAAGTCTTTTATCCCAGCTACTCTGGAAGCTGAGACAGGAAGATTGCTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTACCTGGGTCTCATTCTaGGCTCAAGCCCTTGCTAAT +
Preference number: 3 (lower is better)
Translates to: ARARTAYYPVKLQRRLETTWVSF*AQALAN
Trigger: ATTAGCAAGGGCTTGAGCCAAGAATGAGACCCAGGT...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAACTAGAATCAGCATCTaGGAGCCAGATACGTCCATG +
Preference number: 3 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNETRISI*EPDTSM
Trigger: CATGGACGTATCTGGCTCCAAGATGCTGATTCTAGT...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTGTTTGGCCGACAGGTaGCACCTCTGCCTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVCLADR*HLCLRR
Trigger: TCTTCTCAGGCAGAGGTGCAACCTGTCGGCCAAACA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR TCA 72 bp AAACCACAGCCTGGTGTGACATCAAAAATGACAGGCTaGGAAAACCCAGCCTTGCAGGTAGGAATGGAGCAG +
Preference number: 3 (lower is better)
Translates to: KPQPGVTSKMTG*ENPALQVGMEQ
Trigger: CTGCTCCATTCCTACCTGCAAGGCTGGGTTTTCTCAGCCTGTCATTTTTGATGTCACACCAGGCTGTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACTCACTAGCCAGTGTTaGGCCGACAGGTTGCACCTC +
Preference number: 3 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLTSQC*ADRLHL
Trigger: GAGGTGCAACCTGTCGGCCAAACACTGGCTAGTGAG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CCA 72 bp TTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTaGTCAGTAACATCTGCAACATTATACAGCCAGCAG +
Preference number: 3 (lower is better)
Translates to: LRLVRLDLAAVP*SVTSATLYSQQ
Trigger: CTGCTGGCTGTATAATGTTGCAGATGTTACTGACCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATTGAAGGTTTCCCCCTaGACTTCAGTGTTGAATGGC +
Preference number: 3 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLKVSP*TSVLNG
Trigger: GCCATTCAACACTGAAGTCAAGGGGGAAACCTTCAA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAAAGCTACACGCTCTTaGTGGAGAAGCACCAAAAGG +
Preference number: 3 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRKATRS*WRSTKR
Trigger: CCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGCTTT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCATGCACAAAACCTTTTTaGTTCAGAATACCTCTGAGT +
Preference number: 3 (lower is better)
Translates to: WSSPEEACLPWKPILGSACTKPF*FRIPLS
Trigger: ACTCAGAGGTATTCTGAACAAAAAAGGTTTTGTGCA...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAATCTCCTACCAGCCCTaGGTAAATGACCCTACCAGG +
Preference number: 3 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILISYQP*VNDPTR
Trigger: CCTGGTAGGGTCATTTACCAAGGGCTGGTAGGAGAT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp AGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTTGTCAGATATTAAGTCATTaGGTTCACAAGATGGTCCGG +
Preference number: 3 (lower is better)
Translates to: RARTAYYPVKLQRRLETCQILSH*VHKMVR
Trigger: CCGGACCATCTTGTGAACCAAATGACTTAATATCTG...ACAAGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR TCA 72 bp GCAACATTATACAGCCAGCAGATCAGCTCTTCCAGCTaGCAGCAAAATGTCTTCAGTTTCCTCTCTCCTCCT +
Preference number: 3 (lower is better)
Translates to: ATLYSQQISSSS*QQNVFSFLSPP
Trigger: AGGAGGAGAGAGGAAACTGAAGACATTTTGCTGTCAGCTGGAAGAGCTGATCTGCTGGCTGTATAATGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 72 bp GTCTCATTCTTGGCTCAAGCCCTTGCTAATTATAAGTaGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTC +
Preference number: 3 (lower is better)
Translates to: VSFLAQALANYK*ARYLTSLCSFL
Trigger: GAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAGGGCTTGAGCCAAGAATGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 72 bp TCAGCCTCTGCAAATAGTCTACCTGGGTCTCATTCTTaGCTCAAGCCCTTGCTAATTATAAGTGGGCACGTT +
Preference number: 3 (lower is better)
Translates to: SASANSLPGSHS*LKPLLIISGHV
Trigger: AACGTGCCCACTTATAATTAGCAAGGGCTTGAGCCAAGAATGAGACCCAGGTAGACTATTTGCAGAGGCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATGTTTGGCCGACAGGTaGCACCTCTGCCTGAGAAGA +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRCLADR*HLCLRR
Trigger: TCTTCTCAGGCAGAGGTGCAACCTGTCGGCCAAACA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACCCTTGACTTCAGTGTaGAATGGCTCTTGCAAGGAC +
Preference number: 3 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKPLTSV*NGSCKD
Trigger: GTCCTTGCAAGAGCCATTCAACACTGAAGTCAAGGG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACTAATTTGGCCATGTTaGCTCATAGAAATGCTGCTG +
Preference number: 3 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLIWPC*LIEMLL
Trigger: CAGCAGCATTTCTATGAGCAAACATGGCCAAATTAG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR TCA 72 bp ATGCCCCTAACTTTGCACTTAAACCACTGTGGCAAATaGAGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACT +
Preference number: 3 (lower is better)
Translates to: MPLTLHLNHCGK*SSRSPAVKKAT
Trigger: AGTGGCTTTCTTGACTGCAGGACTTCTAGAGCTTCATTTGCCACAGTGGTTTAAGTGCAAAGTTAGGGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR GCA 72 bp ATTCCAAAGACAGCAGTGCCATGTTTCAAATTCAGATaGCTGACACCGATAACCCTATTCCACGCAGTGTTC +
Preference number: 3 (lower is better)
Translates to: IPKTAVPCFKFR*LTPITLFHAVF
Trigger: GAACACTGCGTGGAATAGGGTTATCGGTGTCAGGCATCTGAATTTGAAACATGGCACTGCTGTCTTTGGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR GCA 72 bp CAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTaGAGTCCCGTGGTCAGTAACATCTGCAACATTATA +
Preference number: 3 (lower is better)
Translates to: QRRLETCKIGPG*SPVVSNICNII
Trigger: TATAATGTTGCAGATGTTACTGACCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 72 bp CAGATATTAAGTCATTTGGTTCACAAGATGGTCCGGTaGCCACAAAGTCTAGGCAACAGTACATCCAATGCC +
Preference number: 3 (lower is better)
Translates to: QILSHLVHKMVR*PQSLGNSTSNA
Trigger: GGCATTGGATGTACTGTTGCCTAGACTTTGTGGCCACCGGACCATCTTGTGAACCAAATGACTTAATATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CCA 72 bp TCCTGGACAGGCACATTCCTGAACCTTCAACATGTCTaGGAATGCACCGAAGCCCTCAACATGAATTATTTA +
Preference number: 3 (lower is better)
Translates to: SWTGTFLNLQHV*ECTEALNMNYL
Trigger: TAAATAATTCATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTGAAGGTTCAGGAATGTGCCTGTCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAAAGCTACACGCTCTTaGTGGAGAAGCACCAAAAGG +
Preference number: 3 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILKATRS*WRSTKR
Trigger: CCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGCTTT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAATCTCCTACCAGCCCTaGGTAAATGACCCTACCAGG +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRISYQP*VNDPTR
Trigger: CCTGGTAGGGTCATTTACCAAGGGCTGGTAGGAGAT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATTGGGAAACAGGGTATaGTGTAACATTCTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLGNRV*CNILCK
Trigger: TTTGCACAGAATGTTACACAATACCCTGTTTCCCAA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR TCA 72 bp TTCAAAATAGCCGTGTTGACGTCGTCTTCCATTTGCTaGGCTTACCTATGGATCTCCAAGAACCCAGATCTT +
Preference number: 3 (lower is better)
Translates to: FKIAVLTSSSIC*AYLWISKNPDL
Trigger: AAGATCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAACACGGCTATTTTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACCCTTGACTTCAGTGTaGAATGGCTCTTGCAAGGAC +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRPLTSV*NGSCKD
Trigger: GTCCTTGCAAGAGCCATTCAACACTGAAGTCAAGGG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAATCTTTAAAGAGGGATaGACAAGCCCAAATTTCCTT +
Preference number: 3 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRIFKEG*TSPNFL
Trigger: AAGGAAATTTGGGCTTGTCAATCCCTCTTTAAAGAT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACTTTTTCCTTCACTATaGACAGCTTCAGTTTCTGTA +
Preference number: 3 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLFPSL*TASVSV
Trigger: TACAGAAACTGAAGCTGTCAATAGTGAAGGAAAAAG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATGCCCAGCCTTCAGCTaGAGTTTTAAGGTAAGTCTT +
Preference number: 3 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILCPAFS*SFKVSL
Trigger: AAGACTTACCTTAAAACTCAAGCTGAAGGCTGGGCA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTACTTGACTCTAATTaGGCCATGTTTGCTCATAGA +
Preference number: 3 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLLDSN*AMFAHR
Trigger: TCTATGAGCAAACATGGCCAAATTAGAGTCAAGTAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTGAAGGTTTCCCCCTaGACTTCAGTGTTGAATGGC +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLKVSP*TSVLNG
Trigger: GCCATTCAACACTGAAGTCAAGGGGGAAACCTTCAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAACCAGGTGGAATAGTTaGAGCTTTATCTGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKTRWNS*SFICSF
Trigger: AAAAGAGCAGATAAAGCTCAAACTATTCCACCTGGT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAACCAGGTGGAATAGTTaGAGCTTTATCTGCTCTTTT +
Preference number: 3 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILTRWNS*SFICSF
Trigger: AAAAGAGCAGATAAAGCTCAAACTATTCCACCTGGT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGCAAGCTCAGCTACTaGACTCTAATTTGGCCATGT +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSKLSY*TLIWPC
Trigger: ACATGGCCAAATTAGAGTCAAGTAGCTGAGCTTGCT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTTAAAGCTAGTATATaGAAGGTTTCCCCCTTGACT +
Preference number: 3 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFKASI*KVSPLT
Trigger: AGTCAAGGGGGAAACCTTCAATATACTAGCTTTAAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATTTAAAGCTAGTATATaGAAGGTTTCCCCCTTGACT +
Preference number: 3 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKFKASI*KVSPLT
Trigger: AGTCAAGGGGGAAACCTTCAATATACTAGCTTTAAA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACTTTTTCCTTCACTATaGACAGCTTCAGTTTCTGTA +
Preference number: 3 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLFPSL*TASVSV
Trigger: TACAGAAACTGAAGCTGTCAATAGTGAAGGAAAAAG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGTTACCCTTTAAGCTaGATAATTAGCTCCATAGCC +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSYPLS*IISSIA
Trigger: GGCTATGGAGCTAATTATCAAGCTTAAAGGGTAACT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTGGGAAACAGGGTATaGTGTAACATTCTGTGCAAA +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLGNRV*CNILCK
Trigger: TTTGCACAGAATGTTACACAATACCCTGTTTCCCAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAATCTTTAAAGAGGGATaGACAAGCCCAAATTTCCTT +
Preference number: 3 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRIFKEG*TSPNFL
Trigger: AAGGAAATTTGGGCTTGTCAATCCCTCTTTAAAGAT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CCA 72 bp AAATTCCAGCGTTCTTTTCCCCATGGCAGTAAAGATTaGGATTTACAACAAATTTCAGCATGCCTTAAGATT +
Preference number: 3 (lower is better)
Translates to: KFQRSFPHGSKD*DLQQISACLKI
Trigger: AATCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAAAAGAACGCTGGAATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR TCA 72 bp TGTGCAAATTCCTGTCAGTTGAAGCTGATTATTAGTTaGATGGGAATAGAATGCCACATTCTGCATTCAATT +
Preference number: 3 (lower is better)
Translates to: CANSCQLKLIIS*MGIECHILHSI
Trigger: AATTGAATGCAGAATGTGGCATTCTATTCCCATTCAACTAATAATCAGCTTCAACTGACAGGAATTTGCACA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR GCA 72 bp TGGGATTTACAACAAATTTCAGCATGCCTTAAGATTTaGTTCTATGTATACGCCAATAAATGTGGTTCTGGA +
Preference number: 3 (lower is better)
Translates to: WDLQQISACLKI*FYVYANKCGSG
Trigger: TCCAGAACCACATTTATTGGCGTATACATAGAAGCAAATCTTAAGGCATGCTGAAATTTGTTGTAAATCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CCA 72 bp TATCTTAGATCATCTCTAGGTAAGGTAGTACTTTCTTaGGAAACAGGGTATTGTGTAACATTCTGTGCAAAT +
Preference number: 3 (lower is better)
Translates to: YLRSSLGKVVLS*ETGYCVTFCAN
Trigger: ATTTGCACAGAATGTTACACAATACCCTGTTTCCCAAGAAAGTACTACCTTACCTAGAGATGATCTAAGATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR GCA 72 bp GGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATaGCTTAAGATTTGCTTCTATGTATACGCCAATAAA +
Preference number: 3 (lower is better)
Translates to: GSKDWDLQQISA*LKICFYVYANK
Trigger: TTTATTGGCGTATACATAGAAGCAAATCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAGCAGCCCCATGCGCTaGCCCCGAGCTGGCGGACCC +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGSSPMR*PRAGGP
Trigger: GGGTCCGCCAGCTCGGGGCCAGCGCATGGGGCTGCT...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAACAGAGGAAGGTTCCTaGGGGACGACCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGTEEGS*GTTGSR
Trigger: CCTGGAGCCGGTCGTCCCCCAGGAACCTTCCTCTGT...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCGGTGACCCTGGAGACTaGTGCCTGTGGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETGDPGD*CLWRKQ
Trigger: CTGCTTCCTCCACAGGCAGCAGTCTCCAGGGTCACC...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCGCTATCAAGGTGCTTTaGGAGCTGAGGCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETAIKVL*ELRPGP
Trigger: AGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGC...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAAAATGGCAGGGCAGTaGCCTCTGCTGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGKMAGQ*PLLVGS
Trigger: ACTGCCCACCAGCAGAGGCCACTGCCCTGCCATTTT...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACGCACCCCTCAGGGCTaGCTCTCTGCGCTCCCAACG +
Preference number: 4 (lower is better)
Translates to: WSSPEEACLPWKPILGSARTPQG*LSALPT
Trigger: CGTTGGGAGCGCAGAGAGCCAGCCCTGAGGGGTGCG...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCAGGAGTGGCGGTCGGGTaGTGGAGGCAGGGAATCTGG +
Preference number: 4 (lower is better)
Translates to: WSSPEEACLPWKPILGSAGVAVG*WRQGIW
Trigger: CCAGATTCCCTGCCTCCATCACCCGACCGCCACTCC...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTAGGTGCTTTGGGAGCTaGGGCCCGGGCCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: ARARTAYYPVKLQRRLETRCFGS*GPGLSG
Trigger: CCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCT...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAAGTTGGCTCCAAGATaGCAAGCCCATGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGKLAPR*QAHATL
Trigger: CAGGGTGGCATGGGCTTGGCATCTTGGAGCCAACTT...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCAGGCAGTGGCCTCTGCTaGTGGGCAGTTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: WSSPEEACLPWKPILGSAGSGLC*WAVGGD
Trigger: GTCTCCCCCAACTGCCCACCAGCAGAGGCCACTGCC...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGGGGCGCCGGGCACTCTaGCTGGTCCTCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWGRRAL*LVLFSL
Trigger: GAGGGAGAAGAGGACCAGCCAGAGTGCCCGGCGCCC...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGGAGACCCCGAGGGCCTaGCTGCTCCCCAGACTGCCT +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLEETPRA*LLPRLP
Trigger: AGGCAGTCTGGGGAGCAGCCAGGCCCTCGGGGTCTC...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGCTGCAGCTGGAAGGCTaGGCTGCGGAACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLELQLEG*AAEPGL
Trigger: GAGCCCAGGTTCCGCAGCTCAGCCTTCCAGCTGCAG...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGGAACACAGGCTGTGGTaGCCACTGGGGCCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWEHRLW*PLGPRS
Trigger: GGACCTCGGCCCCAGTGGTCACCACAGCCTGTGTTC...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAAGGGGCTCTGCCCTTTaGTATCCCCAGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNERGSAL*YPQWAG
Trigger: CCCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCT...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGACTGGGATTAATAGTGTaGGCCAAGGTGCCTGGCCTA +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGLGLIV*AKVPGL
Trigger: TAGGCCAGGCACCTTGGCTCACACTATTAATCCCAG...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGGGCTGCTCCCCAGACTaGCTTCCCCTGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWGCSPD*LPLRSR
Trigger: ACGACTCCGCAGGGGAAGGCAGTCTGGGGAGCAGCC...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCCTGAGGTCCAGTGCCTaGGGCAAATCTGCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETLRSSA*GKSARD
Trigger: ATCCCTAGCAGATTTGCCCCAGGCACTGGACCTCAG...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAGGCCCGGGCCTCAGTaGGTAAGTATAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETRPGPQ*VSIVKQ
Trigger: CTGCTTGACTATACTTACCCACTGAGGCCCGGGCCT...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCGGGGTAGATGCAAGTTaGCTCCAAGATGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETGVDAS*LQDAKP
Trigger: GGGCTTGGCATCTTGGAGCCAACTTGCATCTACCCC...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGGAGAGACCTGAGCTGTaGGGCTGCTGGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLEERPEL*GCWLRS
Trigger: GGACCTCAGCCAGCAGCCTCACAGCTCAGGTCTCTC...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCGGACAGGCACATTCCTaGACCTTCAACATGTCTGGG +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETGQAHS*TFNMSG
Trigger: CCCAGACATGTTGAAGGTTCAGGAATGTGCCTGTCC...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGTTCCAGAGAGGGGAGTaGCGGTCGGGTGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWFQRGE*RSGDGG
Trigger: GCCTCCATCACCCGACCGCCACTCCCCTCTCTGGAA...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAGGAAGGCTCAGAGTCTaGGGGAACTCCTCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNEGRLRV*GNSSEE
Trigger: TTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCC...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATCCAGGCGTGGGGGCTaGTCCCCACTCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSRRGG*SPLMGP
Trigger: AGGGCCCATGAGTGGGGAGCAGCCCCCACGCCTGGA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAACAGAGATGCTGCAGCTaGAAGGCTGAGCTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNEQRCCS*KAELRN
Trigger: GTTCCGCAGCTCAGCCTTCCAGCTGCAGCATCTCTG...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGGGGAGGAGGAGACCTTaGCCAGAGAACCACCACGAG +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLEGRRRP*PENHHE
Trigger: CTCGTGGTGGTTCTCTGGCCAAGGTCTCCTCCTCCC...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGCTGTGGTGACCACTaGGGCCGAGGTCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGCGDH*GRGPSP
Trigger: GGGGCTAGGACCTCGGCCCCAGTGGTCACCACAGCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGGCCCAGTACTCAGCCTaGAAGGAGAGGCGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLEAQYSA*KERRLL
Trigger: CAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGC...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGTCTGGGCCCAGAAAATaGCAGGGCAGTGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLESGPRK*QGSGLC
Trigger: GCAGAGGCCACTGCCCTGCCATTTTCTGGGCCCAGA...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCGGTCCAACCTAGCTaGCAAGGAGGGGCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: WSSPEEACLPWKPILGSAPVQPS*QGGACF
Trigger: AAAACACGCCCCTCCTTGCCAGCTAGGTTGGACCGG...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGAGTGGCGGTCGGGTaGTGGAGGCAGGGAATCTGG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGVAVG*WRQGIW
Trigger: CCAGATTCCCTGCCTCCATCACCCGACCGCCACTCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAGGTGCTTTGGGAGCTaGGGCCCGGGCCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVRCFGS*GPGLSG
Trigger: CCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGATTCCACTTCCTCTTCTaGTTTCCACCTAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGFHFLF*FPPRLC
Trigger: ACAGAGTCTAGGTGGAAATCAGAAGAGGAAGTGGAA...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAACCACTGTGGCAAATaGAGCTCTAGAAGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETNHCGK*SSRSPA
Trigger: TGCAGGACTTCTAGAGCTTCATTTGCCACAGTGGTT...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAATCAGCTCTTCCAGCTaGCAGCAAAATGTCTTCAGT +
Preference number: 4 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGISSSS*QQNVFS
Trigger: ACTGAAGACATTTTGCTGTCAGCTGGAAGAGCTGAT...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp AGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTTGTTCTACCCCGGAGTCCTaGAGGACAGGGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RARTAYYPVKLQRRLETCSTPES*RTGSAG
Trigger: GCCAGCTGACCCTGTCCTGCAGGACTCCGGGGTAGA...ACAAGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCAACTCTGGAGGGCCACTaGTTAAGGCTTGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: WSSPEEACLPWKPILGSATLEGH*LRLGSL
Trigger: CAGAGAGCCAAGCCTTAAGCAGTGGCCCTCCAGAGT...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp AGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTTGTTCAGGGCTGGCTCTCTaGGCTCCCAACGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: RARTAYYPVKLQRRLETCSGLAL*APNEHP
Trigger: GGGATGCTCGTTGGGAGCGCAGAGAGCCAGCCCTGA...ACAAGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATCACTGGCCTGTGGCTaGTGGGCTCTAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSLACG*WALEGP
Trigger: CGGCCCCTCTAGAGCCCACCAGCCACAGGCCAGTGA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGTGGAGGCAGGGAATCTaGCAGCACACAGGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWWRQGI*QHTGPV
Trigger: TACTGGGCCTGTGTGCTGCCAGATTCCCTGCCTCCA...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGCAGGACAGGGTCAGCTaGCACACGGCTATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: QARARTAYYPVKLQRRLEQDRVS*HTAIKV
Trigger: CACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTG...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGCAGTGGCCTCTGCTaGTGGGCAGTTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGSGLC*WAVGGD
Trigger: GTCTCCCCCAACTGCCCACCAGCAGAGGCCACTGCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCGCACCCCTCAGGGCTaGCTCTCTGCGCTCCCAACG +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVRTPQG*LSALPT
Trigger: CGTTGGGAGCGCAGAGAGCCAGCCCTGAGGGGTGCG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTTCCCCTGCGGAGTCGTaGGCACGGACGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCSPAES*ARTKER
Trigger: GCGCTCCTTCGTCCGTGCCCACGACTCCGCAGGGGA...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGCGGAGGAAGAAAGCTTaGTCTTCTCCACCGCACCGC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWRRKKA*SSPPHR
Trigger: GCGGTGCGGTGGAGAAGACCAAGCTTTCTTCCTCCG...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACAGGAGGCAGGCCACTaGGTGCAGGCTCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRQEAGH*VQAQTS
Trigger: AGAGGTCTGAGCCTGCACTCAGTGGCCTGCCTCCTG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTGCAGCTGGAAGGCTaGGCTGCGGAACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLQLEG*AAEPGL
Trigger: GAGCCCAGGTTCCGCAGCTCAGCCTTCCAGCTGCAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAGGGGCTCTGCCCTTTaGTATCCCCAGTGGGCAGGG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRRGSAL*YPQWAG
Trigger: CCCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGTCTCAGCAGCCCCATaGGCTGGCCCCGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKVSAAP*AGPELA
Trigger: CGCCAGCTCGGGGCCAGCGCATGGGGCTGCTGAGAC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACCCCGAGGGCCTGGCTaGTCCCCAGACTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKPRGPG*SPDCLP
Trigger: GGGAAGGCAGTCTGGGGAGCAGCCAGGCCCTCGGGG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGCTGCTCCCCACTCATaGGCCCTGGGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRAAPHS*ALGCPA
Trigger: AGCTGGACATCCCAGGGCCCATGAGTGGGGAGCAGC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGCATCACTGGCCTGTaGCTGGTGGGCTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGITGL*LVGSRG
Trigger: CCCTCTAGAGCCCACCAGCCACAGGCCAGTGATGCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTACTGAGCTGCGGAACCTaGGCTCAGCACGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: PEEACLPWKPILGSAPLLLSCGT*AQHGLP
Trigger: TGGAAGTCCGTGCTGAGCCCAGGTTCCGCAGCTCAG...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTAAGCATCCCTACTGCCTaGGGCTCTGGGGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: PEEACLPWKPILGSAPLLSIPTA*GSGGRC
Trigger: GCATCTACCCCCAGAGCCCCAGGCAGTAGGGATGCT...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAGGTGCTTTGGGAGCTaGGGCCCGGGCCTCAGTGGG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILRCFGS*GPGLSG
Trigger: CCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTCCTCTGCCAAAGCAATaGAAACCACAGCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: ARARTAYYPVKLQRRLETPLPKQ*KPQPGV
Trigger: CACACCAGGCTGTGGTTTTCATTGCTTTGGCAGAGG...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATCCAGGCGTGGGGGCTaGTCCCCACTCATGGGCCCT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSRRGG*SPLMGP
Trigger: AGGGCCCATGAGTGGGGAGCAGCCCCCACGCCTGGA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGTGACCCTGGAGACTaGTGCCTGTGGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGDPGD*CLWRKQ
Trigger: CTGCTTCCTCCACAGGCAGCAGTCTCCAGGGTCACC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTCTACCCCGGAGTCCTaGAGGACAGGGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVSTPES*RTGSAG
Trigger: GCCAGCTGACCCTGTCCTGCAGGACTCCGGGGTAGA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTAAGATTGGACCTGGCTaGAGTCCCGTGGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: ARARTAYYPVKLQRRLETKIGPG*SPVVSN
Trigger: GTTACTGACCACGGGACTGCAGCCAGGTCCAATCTT...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAACCCCTTCACATGGGTaGTCCATTGCCGCCATGGGC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRTPSHG*SIAAMG
Trigger: GCCCATGGCGGCAATGGAGCACCCATGTGAAGGGGT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGGAGGAGGAGACCTTaGCCAGAGAACCACCACGAG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGRRRP*PENHHE
Trigger: CTCGTGGTGGTTCTCTGGCCAAGGTCTCCTCCTCCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TCAACATGTCTGGGAATGCACCGAAGCCCTCAACATGAATTATTTAATGCACACGGCTGTGGTGACCACTaGGGCCGAGGTCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: STCLGMHRSPQHELFNAHGCGDH*GRGPSP
Trigger: GGGGCTAGGACCTCGGCCCCAGTGGTCACCACAGCC...GTGTGCATTAAATAATTCATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGCTATCAAGGTGCTTTaGGAGCTGAGGCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRAIKVL*ELRPGP
Trigger: AGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGGCGCCGGGCACTCTaGCTGGTCCTCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGRRAL*LVLFSL
Trigger: GAGGGAGAAGAGGACCAGCCAGAGTGCCCGGCGCCC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGCTGGCTGCAGTCCCGTaGTCAGTAACATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWLAAVP*SVTSAT
Trigger: TGTTGCAGATGTTACTGACCACGGGACTGCAGCCAG...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGCGCTGGCCCCGAGCTaGCGGACCCTGACTGCAACT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKALAPS*RTLTAT
Trigger: AGTTGCAGTCAGGGTCCGCCAGCTCGGGGCCAGCGC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGCAGCCCCATGCGCTaGCCCCGAGCTGGCGGACCC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSSPMR*PRAGGP
Trigger: GGGTCCGCCAGCTCGGGGCCAGCGCATGGGGCTGCT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTGAAGCTGGCTTTGGCTaGAGCTTGAAGGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARARTAYYPVKLQRRLETEAGFG*SLKGRK
Trigger: CTTCCTTCCCTTCAAGCTCCAGCCAAAGCCAGCTTC...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGAGACCCCGAGGGCCTaGCTGCTCCCCAGACTGCCT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKETPRA*LLPRLP
Trigger: AGGCAGTCTGGGGAGCAGCCAGGCCCTCGGGGTCTC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCAGAGGCGTGCCTGCCATaGAAACCAATTCTTGGATCA +
Preference number: 4 (lower is better)
Translates to: WSSPEEACLPWKPILGSAEACLP*KPILGS
Trigger: TGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTC...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCCCATACAGGGGAGATaGGCCCTCCCTCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVPIQGR*ALPQLP
Trigger: TGGAAGCTGAGGGAGGGCTCATCTCCCCTGTATGGG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACTGCAGCTGGAAGGCTaGGCTGCGGAACCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLQLEG*AAEPGL
Trigger: GAGCCCAGGTTCCGCAGCTCAGCCTTCCAGCTGCAG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGAACACAGGCTGTGGTaGCCACTGGGGCCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILEHRLW*PLGPRS
Trigger: GGACCTCGGCCCCAGTGGTCACCACAGCCTGTGTTC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGCAGGTATCCCTTCTaGCCCCCATACAGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGRYPF*PPYRGD
Trigger: ATCTCCCCTGTATGGGGGGCAGAAGGGATACCTGCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTAGGCTCTGGGGGTAGATaGAAGTTGGCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: PEEACLPWKPILGSAPLLGSGGR*KLAPRC
Trigger: GCATCTTGGAGCCAACTTGCATCTACCCCCAGAGCC...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGTCATACAGGCGATCTaGGTGGCTCTCCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRVIQAI*VALQLT
Trigger: GGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGAC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGACCCTGACTGCAACTaGGGCCCTCCAACCGCAGCC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILDPDCN*GPPTAA
Trigger: GGCTGCGGTTGGAGGGCCGCAGTTGCAGTCAGGGTC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGGGGGTCTTGCTATGTTaGTCAGGCTGTACTCGAACT +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWGVLLC*SGCTRT
Trigger: AGTTCGAGTACAGCCTGAGCAACATAGCAAGACCCC...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACCCACTCATGGGCCCTaGGATGTCCAGCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILPTHGP*DVQLPL
Trigger: GAGCGGGAGCTGGACATCCCAGGGCCCATGAGTGGG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCACTGGCCTGTGGCTaGTGGGCTCTAGAGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSLACG*WALEGP
Trigger: CGGCCCCTCTAGAGCCCACCAGCCACAGGCCAGTGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTCTGTTGGCATCACTaGCCTGTGGCTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLCWHH*PVAGGL
Trigger: GAGCCCACCAGCCACAGGCCAGTGATGCCAACAGAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACTACGGGCTCTCTGTTaGCATCACTGGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLRALC*HHWPVA
Trigger: AGCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGTCTCCAGACCCCATaGTGGCAGGAGGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGLQTP*WQEAGH
Trigger: GTGGCCTGCCTCCTGCCACCATGGGGTCTGGAGACC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATGGAGGCAGGGAATCTaGCAGCACACAGGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRWRQGI*QHTGPV
Trigger: TACTGGGCCTGTGTGCTGCCAGATTCCCTGCCTCCA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGCAGTGGCCTCTGCTaGTGGGCAGTTGGGGGAGAC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGSGLC*WAVGGD
Trigger: GTCTCCCCCAACTGCCCACCAGCAGAGGCCACTGCC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACCGGTCCAACCTAGCTaGCAAGGAGGGGCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRPVQPS*QGGACF
Trigger: AAAACACGCCCCTCCTTGCCAGCTAGGTTGGACCGG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCCCCTATTGTAGATTCTaGAGTCAGTACAATTTCAGC +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETPYCRF*SQYNFS
Trigger: GCTGAAATTGTACTGACTCCAGAATCTACAATAGGG...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACAGGAGGCAGGCCACTaGGTGCAGGCTCAGACCTCT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILQEAGH*VQAQTS
Trigger: AGAGGTCTGAGCCTGCACTCAGTGGCCTGCCTCCTG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAGCTTTGGCTGGAGCTTaGAGGGAAGGAAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQALAGA*REGSWP
Trigger: GGGCCAGCTTCCTTCCCTTCAAGCTCCAGCCAAAGC...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTATTCAACATCTGGGTCTaGGAATGGCCACCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PEEACLPWKPILGSAPLLFNIWV*EWPPVQ
Trigger: TTGGACCGGTGGCCATTCTCAGACCCAGATGTTGAA...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGCACACATTGCACCAGTaGTTCTTTTCCCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWHTLHQ*FFSLFS
Trigger: GGAGAACAGGGAAAAGAATCACTGGTGCAATGTGTG...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGGCAGGTATCCCTTCTaGCCCCCATACAGGGGAGAT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVGRYPF*PPYRGD
Trigger: ATCTCCCCTGTATGGGGGGCAGAAGGGATACCTGCC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGACCCTGGAGACTGCTaGCTGTGGAGGAAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVDPGDC*LWRKQR
Trigger: TCTCTGCTTCCTCCACAGGCAGCAGTCTCCAGGGTC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCTACCCCGGAGTCCTaGAGGACAGGGTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSTPES*RTGSAG
Trigger: GCCAGCTGACCCTGTCCTGCAGGACTCCGGGGTAGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAACTCTGGAGGGCCACTaGTTAAGGCTTGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRTLEGH*LRLGSL
Trigger: CAGAGAGCCAAGCCTTAAGCAGTGGCCCTCCAGAGT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAAGTTGGCTCCAAGATaGCAAGCCCATGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRKLAPR*QAHATL
Trigger: CAGGGTGGCATGGGCTTGGCATCTTGGAGCCAACTT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCAGGGCTGGCTCTCTaGGCTCCCAACGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSGLAL*APNEHP
Trigger: GGGATGCTCGTTGGGAGCGCAGAGAGCCAGCCCTGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATCAGGGCTGGCTCTCTaGGCTCCCAACGAGCATCCC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSGLAL*APNEHP
Trigger: GGGATGCTCGTTGGGAGCGCAGAGAGCCAGCCCTGA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTAGAGCCCATATCAAGGTaGTTGCCTATAGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: PEEACLPWKPILGSAPLLEPISR*LPIVSR
Trigger: CCGGCTGACTATAGGCAAGCACCTTGATATGGGCTC...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAGGCATGAGCCACCGTaGCCAGCCTTCAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVRHEPP*PAFSLS
Trigger: ACTCAAGCTGAAGGCTGGGCACGGTGGCTCATGCCT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GAATTATTTAATGCACACAACATCCTAAGAAGGCAGGGCTCCACATTTTACAAAGTCTCAGCAGCCCCATaGGCTGGCCCCGAGCTGGCG +
Preference number: 4 (lower is better)
Translates to: ELFNAHNILRRQGSTFYKVSAAP*AGPELA
Trigger: CGCCAGCTCGGGGCCAGCGCATGGGGCTGCTGAGAC...TTTGTAAAATGTGGAGCCCTGCCTTCTTAGGATGTTGTGTGCATTAAATAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GAATTATTTAATGCACACAACATCCTAAGAAGGCAGGGCTCCACATTTTACAAACCCCGAGGGCCTGGCTaGTCCCCAGACTGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: ELFNAHNILRRQGSTFYKPRGPG*SPDCLP
Trigger: GGGAAGGCAGTCTGGGGAGCAGCCAGGCCCTCGGGG...TTTGTAAAATGTGGAGCCCTGCCTTCTTAGGATGTTGTGTGCATTAAATAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGCTCTGTACCTCCCTCTaGCAAAGCAATGAAAACCAC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWLCTSL*QSNENH
Trigger: GTGGTTTTCATTGCTTTGGCAGAGGGAGGTACAGAG...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCTTCCAAAGACAGCAGTaGCATGTTTCAAATTCAGAT +
Preference number: 4 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETFQRQQ*HVSNSD
Trigger: ATCTGAATTTGAAACATGGCACTGCTGTCTTTGGAA...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGCTGCTCCCCACTCATaGGCCCTGGGATGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKAAPHS*ALGCPA
Trigger: AGCTGGACATCCCAGGGCCCATGAGTGGGGAGCAGC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGCATCACTGGCCTGTaGCTGGTGGGCTCTAGAGGG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGITGL*LVGSRG
Trigger: CCCTCTAGAGCCCACCAGCCACAGGCCAGTGATGCC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACTGAGGTCCAGTGCCTaGGGCAAATCTGCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLRSSA*GKSARD
Trigger: ATCCCTAGCAGATTTGCCCCAGGCACTGGACCTCAG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCAGAGATGCTGCAGCTaGAAGGCTGAGCTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVQRCCS*KAELRN
Trigger: GTTCCGCAGCTCAGCCTTCCAGCTGCAGCATCTCTG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAACAGAGGAAGGTTCCTaGGGGACGACCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKTEEGS*GTTGSR
Trigger: CCTGGAGCCGGTCGTCCCCCAGGAACCTTCCTCTGT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAACAGAGGAAGGTTCCTaGGGGACGACCGGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILTEEGS*GTTGSR
Trigger: CCTGGAGCCGGTCGTCCCCCAGGAACCTTCCTCTGT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGCTGTGGTGACCACTaGGGCCGAGGTCCTAGCCCC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGCGDH*GRGPSP
Trigger: GGGGCTAGGACCTCGGCCCCAGTGGTCACCACAGCC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTCCAGAGAGGGGAGTaGCGGTCGGGTGATGGAGGC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFQRGE*RSGDGG
Trigger: GCCTCCATCACCCGACCGCCACTCCCCTCTCTGGAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAGGCCCGGGCCTCAGTaGGTAAGTATAGTCAAGCAG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRRPGPQ*VSIVKQ
Trigger: CTGCTTGACTATACTTACCCACTGAGGCCCGGGCCT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCAGGACAGGGTCAGCTaGCACACGGCTATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVQDRVS*HTAIKV
Trigger: CACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAGTGGCCTCTGCTGGTaGGCAGTTGGGGGAGACATT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVSGLCW*AVGGDI
Trigger: AATGTCTCCCCCAACTGCCCACCAGCAGAGGCCACT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAAAATGGCAGGGCAGTaGCCTCTGCTGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVKMAGQ*PLLVGS
Trigger: ACTGCCCACCAGCAGAGGCCACTGCCCTGCCATTTT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp AGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTTGTCCACTGCTTAAGGCTTaGCTCTCTGGGCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: RARTAYYPVKLQRRLETCPLLKA*LSGPRK
Trigger: TTTTCTGGGCCCAGAGAGCCAAGCCTTAAGCAGTGG...ACAAGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGGGGTAGATGCAAGTTaGCTCCAAGATGCCAAGCCC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRGVDAS*LQDAKP
Trigger: GGGCTTGGCATCTTGGAGCCAACTTGCATCTACCCC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACGCACCCCTCAGGGCTaGCTCTCTGCGCTCCCAACG +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRRTPQG*LSALPT
Trigger: CGTTGGGAGCGCAGAGAGCCAGCCCTGAGGGGTGCG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGGCGCCGGGCACTCTaGCTGGTCCTCTTCTCCCTC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGRRAL*LVLFSL
Trigger: GAGGGAGAAGAGGACCAGCCAGAGTGCCCGGCGCCC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGGATCCCCAGATCCTTaGAGGGCAGCTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILGSPDP*RAAPGG
Trigger: TCCCCCTGGAGCTGCCCTCCAAGGATCTGGGGATCC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCCCCTGCGGAGTCGTaGGCACGGACGAAGGAGCGC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSPAES*ARTKER
Trigger: GCGCTCCTTCGTCCGTGCCCACGACTCCGCAGGGGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGCCTGGGTCTCATTCTTaGCTCAAGCCCTTGCTAATT +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWPGSHS*LKPLLI
Trigger: AATTAGCAAGGGCTTGAGCCAAGAATGAGACCCAGG...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TCAACATGTCTGGGAATGCACCGAAGCCCTCAACATGAATTATTTAATGCACACTTGCCCAGGCTGGTCTaGAACTCCCGGGCTCAAGCG +
Preference number: 4 (lower is better)
Translates to: STCLGMHRSPQHELFNAHLPRLV*NSRAQA
Trigger: CGCTTGAGCCCGGGAGTTCCAGACCAGCCTGGGCAA...GTGTGCATTAAATAATTCATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGAACACAGGCTGTGGTaGCCACTGGGGCCGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALREHRLW*PLGPRS
Trigger: GGACCTCGGCCCCAGTGGTCACCACAGCCTGTGTTC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGAGTGGCGGTCGGGTaGTGGAGGCAGGGAATCTGG +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGVAVG*WRQGIW
Trigger: CCAGATTCCCTGCCTCCATCACCCGACCGCCACTCC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGCTTTGGCTGGAGCTTaGAGGGAAGGAAGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKALAGA*REGSWP
Trigger: GGGCCAGCTTCCTTCCCTTCAAGCTCCAGCCAAAGC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATTCAACATCTGGGTCTaGGAATGGCCACCGGTCCAA +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRFNIWV*EWPPVQ
Trigger: TTGGACCGGTGGCCATTCTCAGACCCAGATGTTGAA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGTGACCCTGGAGACTaGTGCCTGTGGAGGAAGCAG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGDPGD*CLWRKQ
Trigger: CTGCTTCCTCCACAGGCAGCAGTCTCCAGGGTCACC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAAGTTGGCTCCAAGATaGCAAGCCCATGCCACCCTG +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVKLAPR*QAHATL
Trigger: CAGGGTGGCATGGGCTTGGCATCTTGGAGCCAACTT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGGCTCTGGGGGTAGATaGAAGTTGGCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVGSGGR*KLAPRC
Trigger: GCATCTTGGAGCCAACTTGCATCTACCCCCAGAGCC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGAGCCCATATCAAGGTaGTTGCCTATAGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPREPISR*LPIVSR
Trigger: CCGGCTGACTATAGGCAAGCACCTTGATATGGGCTC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGCTGCTCCCCAGACTaGCTTCCCCTGCGGAGTCGT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGCSPD*LPLRSR
Trigger: ACGACTCCGCAGGGGAAGGCAGTCTGGGGAGCAGCC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACCTTTCCTGGGAAGCTaGCCTTCAACATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRPFLGS*PSTSGS
Trigger: AGACCCAGATGTTGAAGGGCAGCTTCCCAGGAAAGG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACCCACTCATGGGCCCTaGGATGTCCAGCTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRPTHGP*DVQLPL
Trigger: GAGCGGGAGCTGGACATCCCAGGGCCCATGAGTGGG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACTCTGTTGGCATCACTaGCCTGTGGCTGGTGGGCTC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLCWHH*PVAGGL
Trigger: GAGCCCACCAGCCACAGGCCAGTGATGCCAACAGAG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGTCTCCAGACCCCATaGTGGCAGGAGGCAGGCCAC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGLQTP*WQEAGH
Trigger: GTGGCCTGCCTCCTGCCACCATGGGGTCTGGAGACC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTGAGGTCCAGTGCCTaGGGCAAATCTGCTAGGGAT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLRSSA*GKSARD
Trigger: ATCCCTAGCAGATTTGCCCCAGGCACTGGACCTCAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGCCCAGTACTCAGCCTaGAAGGAGAGGCGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILAQYSA*KERRLL
Trigger: CAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAAGTGGCCTCTGCTGGTaGGCAGTTGGGGGAGACATT +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQSGLCW*AVGGDI
Trigger: AATGTCTCCCCCAACTGCCCACCAGCAGAGGCCACT...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATCTGGGCCCAGAAAATaGCAGGGCAGTGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSGPRK*QGSGLC
Trigger: GCAGAGGCCACTGCCCTGCCATTTTCTGGGCCCAGA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAGCATCCCTACTGCCTaGGGCTCTGGGGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSIPTA*GSGGRC
Trigger: GCATCTACCCCCAGAGCCCCAGGCAGTAGGGATGCT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACTGGCTGCAGTCCCGTaGTCAGTAACATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLAAVP*SVTSAT
Trigger: TGTTGCAGATGTTACTGACCACGGGACTGCAGCCAG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATCACTAGCCAGTGTTTaGCCGACAGGTTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSLASV*PTGCTS
Trigger: AGAGGTGCAACCTGTCGGCCAAACACTGGCTAGTGA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGAAGCTGGCTTTGGCTaGAGCTTGAAGGGAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPREAGFG*SLKGRK
Trigger: CTTCCTTCCCTTCAAGCTCCAGCCAAAGCCAGCTTC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGAGAGACCTGAGCTGTaGGGCTGCTGGCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRERPEL*GCWLRS
Trigger: GGACCTCAGCCAGCAGCCTCACAGCTCAGGTCTCTC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATGGCCCATCACTGTCTaGCACTTCCAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILWPITV*HFQGAL
Trigger: CAGAGCCCCTTGGAAGTGTCAGACAGTGATGGGCCA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGAGCCCATATCAAGGTaGTTGCCTATAGTCAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVEPISR*LPIVSR
Trigger: CCGGCTGACTATAGGCAAGCACCTTGATATGGGCTC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAAGATTGGACCTGGCTaGAGTCCCGTGGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVKIGPG*SPVVSN
Trigger: GTTACTGACCACGGGACTGCAGCCAGGTCCAATCTT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTCACCAGACTGCTTTaGGATCCTCCCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLTRLL*DPPKDI
Trigger: GATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGTCATACAGGCGATCTaGGTGGCTCTCCAGCTCACC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILVIQAI*VALQLT
Trigger: GGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGAC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATTCATGCCATTCTCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRFMPFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGAGAATGGCATGAA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTCCTTTCCTGGGAAGCTaGCCTTCAACATCTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCPFLGS*PSTSGS
Trigger: AGACCCAGATGTTGAAGGGCAGCTTCCCAGGAAAGG...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACTCAGCTTCCAGGCGTaGGGGCTGCTCCCCACTCAT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLSFQA*GLLPTH
Trigger: ATGAGTGGGGAGCAGCCCCCACGCCTGGAAGCTGAG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACGGAGGAAGAAAGCTTaGTCTTCTCCACCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRRRKKA*SSPPGF
Trigger: AAAGCCAGGTGGAGAAGACCAAGCTTTCTTCCTCCG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACAGAGATGCTGCAGCTaGAAGGCTGAGCTGCGGAAC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKQRCCS*KAELRN
Trigger: GTTCCGCAGCTCAGCCTTCCAGCTGCAGCATCTCTG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACAGGACAGGGTCAGCTaGCACACGGCTATCAAGGTG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKQDRVS*HTAIKV
Trigger: CACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAGTGGCCTCTGCTGGTaGGCAGTTGGGGGAGACATT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSGLCW*AVGGDI
Trigger: AATGTCTCCCCCAACTGCCCACCAGCAGAGGCCACT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCCACTGCTTAAGGCTTaGCTCTCTGGGCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVPLLKA*LSGPRK
Trigger: TTTTCTGGGCCCAGAGAGCCAAGCCTTAAGCAGTGG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATTCACCCAGGGCCATTaGGACTCCCTACCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKFTQGH*DSLPRS
Trigger: TGACCTAGGTAGGGAGTCTCAATGGCCCTGGGTGAA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTCACCCAGGGCCATTaGGACTCCCTACCTAGGTCA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFTQGH*DSLPRS
Trigger: TGACCTAGGTAGGGAGTCTCAATGGCCCTGGGTGAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGGAGACATTAGTAGGTaGTTTGAGGGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVGDISR*FEGACW
Trigger: CCAGCAAGCACCCTCAAATCACCTACTAATGTCTCC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTCTCCAAAAAGTAAAATaGGAACAGTGCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: ARARTAYYPVKLQRRLETLQKVK*EQCLPG
Trigger: ACCAGGTAAGCACTGTTCTCATTTTACTTTTTGGAG...AGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAACTCTGGAGGGCCACTaGTTAAGGCTTGGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILTLEGH*LRLGSL
Trigger: CAGAGAGCCAAGCCTTAAGCAGTGGCCCTCCAGAGT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGGCTCTGGGGGTAGATaGAAGTTGGCTCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILGSGGR*KLAPRC
Trigger: GCATCTTGGAGCCAACTTGCATCTACCCCCAGAGCC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATCCAGCTCACCAGACTaGTTTGCGATCCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSSSPD*FAILPR
Trigger: CCTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTCAACATGTCTGGGAATaGACCGAAGCCCTCAACATG +
Preference number: 4 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCQHVWE*TEALNM
Trigger: CATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTG...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAAAAGACTTGTCCCACTaGACCTGCCAGCCCAAAACC +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQKDLSH*TCQPKT
Trigger: GGTTTTGGGCTGGCAGGTGCAGTGGGACAAGTCTTT...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACTGAGCTGCGGAACCTaGGCTCAGCACGGACTTCCA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLSCGT*AQHGLP
Trigger: TGGAAGTCCGTGCTGAGCCCAGGTTCCGCAGCTCAG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGGAGGAGGAGACCTTaGCCAGAGAACCACCACGAG +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGRRRP*PENHHE
Trigger: CTCGTGGTGGTTCTCTGGCCAAGGTCTCCTCCTCCC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGCCCAGTACTCAGCCTaGAAGGAGAGGCGTCTCCTG +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRAQYSA*KERRLL
Trigger: CAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGCTATCAAGGTGCTTTaGGAGCTGAGGCCCGGGCCT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRAIKVL*ELRPGP
Trigger: AGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCTGGGCCCAGAAAATaGCAGGGCAGTGGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSGPRK*QGSGLC
Trigger: GCAGAGGCCACTGCCCTGCCATTTTCTGGGCCCAGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGCATCCCTACTGCCTaGGGCTCTGGGGGTAGATGC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSIPTA*GSGGRC
Trigger: GCATCTACCCCCAGAGCCCCAGGCAGTAGGGATGCT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATCCCGTGTCCTTAGCTaGGGAGAGCCCATATCAAGG +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSRVLS*GEPISR
Trigger: CCTTGATATGGGCTCTCCCCAGCTAAGGACACGGGA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GAATTATTTAATGCACACAACATCCTAAGAAGGCAGGGCTCCACATTTTACAAAGGATCCCCAGATCCTTaGAGGGCAGCTCCAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ELFNAHNILRRQGSTFYKGSPDP*RAAPGG
Trigger: TCCCCCTGGAGCTGCCCTCCAAGGATCTGGGGATCC...TTTGTAAAATGTGGAGCCCTGCCTTCTTAGGATGTTGTGTGCATTAAATAATTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAGCTAGGACACGTTCCTaGACAGGCACATTCCTGAAC +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQARTRS*TGTFLN
Trigger: GTTCAGGAATGTGCCTGTCCAGGAACGTGTCCTAGC...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAGGTCAGGGTTCTGCTaGAGACTTCAGCTTCCTACC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILRSGFC*RLQLPT
Trigger: GGTAGGAAGCTGAAGTCTTCAGCAGAACCCTGACCT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAGGTCAGGGTTCTGCTaGAGACTTCAGCTTCCTACC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKRSGFC*RLQLPT
Trigger: GGTAGGAAGCTGAAGTCTTCAGCAGAACCCTGACCT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGAAGGCTCAGAGTCTaGGGGAACTCCTCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGRLRV*GNSSEE
Trigger: TTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAGGAGACATTAGTAGGTaGTTTGAGGGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQGDISR*FEGACW
Trigger: CCAGCAAGCACCCTCAAATCACCTACTAATGTCTCC...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGTTGCACCTCTGCCTaGGAAGATGCCAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGCTSA*EDARLN
Trigger: GTTTAACCTGGCATCTTCTCAGGCAGAGGTGCAACC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TCAACATGTCTGGGAATGCACCGAAGCCCTCAACATGAATTATTTAATGCACACTTAGCCACACTCTTGTaGGGGAACAAGCCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: STCLGMHRSPQHELFNAHLATLL*GNKPEP
Trigger: TGGCTCTGGCTTGTTCCCTCACAAGAGTGTGGCTAA...GTGTGCATTAAATAATTCATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAACATGGGTGCTCCATTaGCGCCATGGGCTTTTTGTC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKTWVLH*RHGLFV
Trigger: GACAAAAAGCCCATGGCGGCAATGGAGCACCCATGT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAACATGGGTGCTCCATTaGCGCCATGGGCTTTTTGTC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILTWVLH*RHGLFV
Trigger: GACAAAAAGCCCATGGCGGCAATGGAGCACCCATGT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGGCATGAGCCACCGTaGCCAGCCTTCAGCTTGAGT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRRHEPP*PAFSLS
Trigger: ACTCAAGCTGAAGGCTGGGCACGGTGGCTCATGCCT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACTACGGGCTCTCTGTTaGCATCACTGGCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLRALC*HHWPVA
Trigger: AGCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATGGAGGCAGGGAATCTaGCAGCACACAGGCCCAGTA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRWRQGI*QHTGPV
Trigger: TACTGGGCCTGTGTGCTGCCAGATTCCCTGCCTCCA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAAAATGGCAGGGCAGTaGCCTCTGCTGGTGGGCAGT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRKMAGQ*PLLVGS
Trigger: ACTGCCCACCAGCAGAGGCCACTGCCCTGCCATTTT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACTGGCTGCAGTCCCGTaGTCAGTAACATCTGCAACA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILLAAVP*SVTSAT
Trigger: TGTTGCAGATGTTACTGACCACGGGACTGCAGCCAG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATCACTAGCCAGTGTTTaGCCGACAGGTTGCACCTCT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSLASV*PTGCTS
Trigger: AGAGGTGCAACCTGTCGGCCAAACACTGGCTAGTGA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGATGGAAACCAATTCTTaGATCAGCACCATTACTAAC +
Preference number: 4 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWMETNS*ISTITN
Trigger: GTTAGTAATGGTGCTGATCCAAGAATTGGTTTCCAT...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGGAGACATTAGTAGGTaGTTTGAGGGTGCTTGCTGG +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILGDISR*FEGACW
Trigger: CCAGCAAGCACCCTCAAATCACCTACTAATGTCTCC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTCCACTTCCTCTTCTaGTTTCCACCTAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVFHFLF*FPPRLC
Trigger: ACAGAGTCTAGGTGGAAATCAGAAGAGGAAGTGGAA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTCTCCAACAGGCACTaGAGAAGAATCTCCCCCTTC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFSNRH*RRISPF
Trigger: GAAGGGGGAGATTCTTCTTCAGTGCCTGTTGGAGAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATCTTCGACCTTGGATTaGATTTCCCTTAGCCTACAT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSSTLD*ISLSLH
Trigger: ATGTAGGCTAAGGGAAATTCAATCCAAGGTCGAAGA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACAGCTGCACACTCTGTaGAATCCTTTCAGAATGATA +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRQLHTL*NPFRMI
Trigger: TATCATTCTGAAAGGATTTCACAGAGTGTGCAGCTG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GAATTATTTAATGCACACAACATCCTAAGAAGGCAGGGCTCCACATTTTACAAATGGCCCATCACTGTCTaGCACTTCCAAGGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELFNAHNILRRQGSTFYKWPITV*HFQGAL
Trigger: CAGAGCCCCTTGGAAGTGTCAGACAGTGATGGGCCA...TTTGTAAAATGTGGAGCCCTGCCTTCTTAGGATGTTGTGTGCATTAAATAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATCTCTTAGGTCCTCTTaGATGCCTGAGAATATTGAG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSLRSS*MPENIE
Trigger: CTCAATATTCTCAGGCATGCAAGAGGACCTAAGAGA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTCATGCCATTCTCATaGCTCAGCCTCCCAAGTAGC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFMPFS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCATGAGAATGGCATGAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATGTGATGCCATGCCGTaGACTTCATTTTTACACAGT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRCDAMP*TSFLHS
Trigger: ACTGTGTAAAAATGAAGTGCACGGCATGGCATCACA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGATACTGTGATGCCATaGCGTGCACTTCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRDTVMP*RALHFY
Trigger: GTAAAAATGAAGTGCACGGCATGGCATCACAGTATC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp AGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTTGTTACCTAACCTCTCTCTaGTCTTTCCTCCAAAAAGTA +
Preference number: 4 (lower is better)
Translates to: RARTAYYPVKLQRRLETCYLTSL*SFLQKV
Trigger: TACTTTTTGGAGGAAAGAGCAGAGAGAGGTTAGGTA...ACAAGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTGAAGTGTTCTACATCTaGACTGTTCTACGTGGTAGC +
Preference number: 4 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCEVFYI*TVLRGS
Trigger: GCTACCACGTAGAACAGTGCAGATGTAGAACACTTC...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTGGTCTTCTCCACCTaGCTTTCCCCGGAGAGCAGA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLVFST*LSPESR
Trigger: TCTGCTCTCCGGGGAAAGCCAGGTGGAGAAGACCAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACGGAGGAAGAAAGCTTaGTCTTCTCCACCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKRRKKA*SSPPGF
Trigger: AAAGCCAGGTGGAGAAGACCAAGCTTTCTTCCTCCG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATTCATACTCTTTATTTaGGTTCCAGAGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRFILFI*VPERGV
Trigger: CACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCCCGTGTCCTTAGCTaGGGAGAGCCCATATCAAGG +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSRVLS*GEPISR
Trigger: CCTTGATATGGGCTCTCCCCAGCTAAGGACACGGGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATTAAACCCCTTCACATaGGTGCTCCATTGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLNPFT*VLHCRH
Trigger: ATGGCGGCAATGGAGCACCCATGTGAAGGGGTTTAA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGACTTCAGTGTTGAATaGCTCTTGCAAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRDFSVE*LLQGLL
Trigger: AAGAAGTCCTTGCAAGAGCCATTCAACACTGAAGTC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATATAGGCGTGCTTGGTaGATCTATTCATCCTCACAT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRYRRAW*IYSSSH
Trigger: ATGTGAGGATGAATAGATCCACCAAGCACGCCTATA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTCTAGAATCAGCATCTTaGAGCCAGATACGTCCATGT +
Preference number: 4 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCLESAS*SQIRPC
Trigger: ACATGGACGTATCTGGCTCCAAGATGCTGATTCTAG...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp TTTATCAGTAAAGAGGGGTCCATGATAACGTGTCCTACCTACCTCACAAGACAAAACCTTCAACATGTCTaGGAATGCACCGAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: FISKEGSMITCPTYLTRQNLQHV*ECTEAL
Trigger: GAGGGCTTCGGTGCATTCCCAGACATGTTGAAGGTT...TTGTCTTGTGAGGTAGGTAGGACACGTTATCATGGACCCCTCTTTACTGATAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CAA 72 bp AAGCTTCAAAATAGCCGTGTTGACGTCGTCTTCCATTaGCTGAGCTTACCTATGGATCTCCAAGAACCCAGA +
Preference number: 4 (lower is better)
Translates to: KLQNSRVDVVFH*LSLPMDLQEPR
Trigger: TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAACACGGCTATTTTGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGGTTGCACCTCTGCCTaGGAAGATGCCAGGTTAAAC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRGCTSA*EDARLN
Trigger: GTTTAACCTGGCATCTTCTCAGGCAGAGGTGCAACC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACTGCTGATCCAGCTTTaGGTATCATCACTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILLLIQL*VSSLPC
Trigger: ACAGGGAAGTGATGATACTCAAAGCTGGATCAGCAG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACTGCTGATCCAGCTTTaGGTATCATCACTTCCCTGT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLLIQL*VSSLPC
Trigger: ACAGGGAAGTGATGATACTCAAAGCTGGATCAGCAG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAATGTCAAGATACTGTaGTGCCATGCCGTGCACTTC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILNVKIL*CHAVHF
Trigger: GAAGTGCACGGCATGGCATCACAGTATCTTGACATT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAATGTCAAGATACTGTaGTGCCATGCCGTGCACTTC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKNVKIL*CHAVHF
Trigger: GAAGTGCACGGCATGGCATCACAGTATCTTGACATT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAAGATTGGACCTGGCTaGAGTCCCGTGGTCAGTAAC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRKIGPG*SPVVSN
Trigger: GTTACTGACCACGGGACTGCAGCCAGGTCCAATCTT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACTCACCAGACTGCTTTaGGATCCTCCCAAGGACATC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLTRLL*DPPKDI
Trigger: GATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTTCCATTGTTACTGTaGTTTCCTCCTTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVFPLLL*FPPSRF
Trigger: GAACCTGGAAGGAGGAAAGCACAGTAACAATGGAAA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAATGTCTTCACACATTaGACCAGTGATTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRNVFTH*TSDSFP
Trigger: GGGAAAAGAATCACTGGTGCAATGTGTGAAGACATT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACCACTGCTTAAGGCTTaGCTCTCTGGGCCCAGAAAA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRPLLKA*LSGPRK
Trigger: TTTTCTGGGCCCAGAGAGCCAAGCCTTAAGCAGTGG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GAATTATTTAATGCACACAACATCCTAAGAAGGCAGGGCTCCACATTTTACAAATCCCGTGTCCTTAGCTaGGGAGAGCCCATATCAAGG +
Preference number: 4 (lower is better)
Translates to: ELFNAHNILRRQGSTFYKSRVLS*GEPISR
Trigger: CCTTGATATGGGCTCTCCCCAGCTAAGGACACGGGA...TTTGTAAAATGTGGAGCCCTGCCTTCTTAGGATGTTGTGTGCATTAAATAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGCCCATCACCACGCCTaGCTAATTTCTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVAHHHA*LISFCI
Trigger: AATACAAAAAGAAATTAGCCAGGCGTGGTGATGGGC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTCCACTTCCTCTTCTaGTTTCCACCTAGACTCTGT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILFHFLF*FPPRLC
Trigger: ACAGAGTCTAGGTGGAAATCAGAAGAGGAAGTGGAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAGCATCTTACTAGGCTaGAACAATTTCAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSILLG*NNFSLI
Trigger: AATCAAGCTGAAATTGTTTCAGCCTAGTAAGATGCT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATTAAATCTAAGCAGCTaGACACTCTGTGAAATCCTT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLNLSS*TLCEIL
Trigger: AAGGATTTCACAGAGTGTGCAGCTGCTTAGATTTAA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGCATGCCTTAAGATTTaGTTCTATGTATACGCCAAT +
Preference number: 4 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRACLKI*FYVYAN
Trigger: ATTGGCGTATACATAGAAGCAAATCTTAAGGCATGC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTAAACCCCTTCACATaGGTGCTCCATTGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLNPFT*VLHCRH
Trigger: ATGGCGGCAATGGAGCACCCATGTGAAGGGGTTTAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGCTACACGCTCTTTGTaGAGAAGCACCAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILATRSL*RSTKRK
Trigger: TTTCCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGCTACACGCTCTTTGTaGAGAAGCACCAAAAGGAAA +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKATRSL*RSTKRK
Trigger: TTTCCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 72 bp ACGCAGTGTTCTTTATACCTCCAGATATTAAGTCATTaGGTTCACAAGATGGTCCGGTGGCCACAAAGTCTA +
Preference number: 4 (lower is better)
Translates to: TQCSLYLQILSH*VHKMVRWPQSL
Trigger: TAGACTTTGTGGCCACCGGACCATCTTGTGAACCAAATGACTTAATATCTGGAGGTATAAAGAACACTGCGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
3UTR CAA 72 bp CTTGGATCAGCACCATTACTAACTAGAATCAGCATCTaGGAGCCAGATACGTCCATGTTTCTCTGGAAAAGT +
Preference number: 4 (lower is better)
Translates to: LGSAPLLTRISI*EPDTSMFLWKS
Trigger: ACTTTTCCAGAGAAACATGGACGTATCTGGCTCCAAGATGCTGATTCTAGTTAGTAATGGTGCTGATCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCGTCTTCCATTTGCTaGGCTTACCTATGGATCTCC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSSSIC*AYLWIS
Trigger: GGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCATAGTCATTGTGGTCTaGGCAGTAATTTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVIVIVV*AVISYS
Trigger: AGAATAGGAAATTACTGCTCAGACCACAATGACTAT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACAGCTGCACACTCTGTaGAATCCTTTCAGAATGATA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILQLHTL*NPFRMI
Trigger: TATCATTCTGAAAGGATTTCACAGAGTGTGCAGCTG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACACACATTGCACCAGTaGTTCTTTTCCCTGTTCTCC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRHTLHQ*FFSLFS
Trigger: GGAGAACAGGGAAAAGAATCACTGGTGCAATGTGTG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTAGGTCCTCTTGCATaGCTGAGAATATTGAGTATT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLGPLA*LRILSI
Trigger: AATACTCAATATTCTCAGGCATGCAAGAGGACCTAA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATTTCCATTGTTACTGTaGTTTCCTCCTTCCAGGTTC +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKFPLLL*FPPSRF
Trigger: GAACCTGGAAGGAGGAAAGCACAGTAACAATGGAAA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATGTGATGCCATGCCGTaGACTTCATTTTTACACAGT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKCDAMP*TSFLHS
Trigger: ACTGTGTAAAAATGAAGTGCACGGCATGGCATCACA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGACTTCAGTGTTGAATaGCTCTTGCAAGGACTTCTT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILDFSVE*LLQGLL
Trigger: AAGAAGTCCTTGCAAGAGCCATTCAACACTGAAGTC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGCCCATCACCACGCCTaGCTAATTTCTTTTTGTATT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILAHHHA*LISFCI
Trigger: AATACAAAAAGAAATTAGCCAGGCGTGGTGATGGGC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACCTATTCTTCGACCTTaGATTGAATTTCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILPILRP*IEFPLA
Trigger: GGCTAAGGGAAATTCAATCCAAGGTCGAAGAATAGG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATATAGGCGTGCTTGGTaGATCTATTCATCCTCACAT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKYRRAW*IYSSSH
Trigger: ATGTGAGGATGAATAGATCCACCAAGCACGCCTATA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
3UTR CAA 72 bp AGGCATTTTAAAGCTAGTATATTGAAGGTTTCCCCCTaGACTTCAGTGTTGAATGGCTCTTGCAAGGACTTC +
Preference number: 4 (lower is better)
Translates to: RHFKASILKVSP*TSVLNGSCKDF
Trigger: GAAGTCCTTGCAAGAGCCATTCAACACTGAAGTCAAGGGGGAAACCTTCAATATACTAGCTTTAAAATGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACCAGGTGGAATAGTTTaGGCTTTATCTGCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKPGGIV*ALSALF
Trigger: AAAAAGAGCAGATAAAGCTCAAACTATTCCACCTGG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCAGCTTATTCTTGGTaGGTTAGCGGAAACATTACA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSAYSW*VSGNIT
Trigger: TGTAATGTTTCCGCTAACTCACCAAGAATAAGCTGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAAGTGCCTGGTCAACATaGACATGTTTTATTATGATG +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQSAWST*TCFIMM
Trigger: CATCATAATAAAACATGTTCATGTTGACCAGGCACT...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCAGGCACTTGAAATACTaGATTTTATGTGTAGCTACT +
Preference number: 4 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVRHLKY*ILCVAT
Trigger: AGTAGCTACACATAAAATGCAGTATTTCAAGTGCCT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp TCAACATGTCTGGGAATGCACCGAAGCCCTCAACATGAATTATTTAATGCACACATTACCTTCACACATTaGACCAGTGATTCTTTTCCC +
Preference number: 4 (lower is better)
Translates to: STCLGMHRSPQHELFNAHITFTH*TSDSFP
Trigger: GGGAAAAGAATCACTGGTGCAATGTGTGAAGGTAAT...GTGTGCATTAAATAATTCATGTTGAGGGCTTCGGTGCATTCCCAGACATGTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR GCA 90 bp TTTATCAGTAAAGAGGGGTCCATGATAACGTGTCCTACCTACCTCACAAGACAATGTTTCAAATTCAGATaGCTGACACCGATAACCCTA +
Preference number: 4 (lower is better)
Translates to: FISKEGSMITCPTYLTRQCFKFR*LTPITL
Trigger: TAGGGTTATCGGTGTCAGGCATCTGAATTTGAAACA...TTGTCTTGTGAGGTAGGTAGGACACGTTATCATGGACCCCTCTTTACTGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAATGACCCTACCAGGTaGAATAGTTTGAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILNDPTR*NSLSFI
Trigger: GATAAAGCTCAAACTATTCCACCTGGTAGGGTCATT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATATTATAGGCGTGCTTaGTGGATCTATTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKYYRRA*WIYSSS
Trigger: TGAGGATGAATAGATCCACCAAGCACGCCTATAATA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATATTATAGGCGTGCTTaGTGGATCTATTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILYYRRA*WIYSSS
Trigger: TGAGGATGAATAGATCCACCAAGCACGCCTATAATA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACTCTCCGTCAGAGACTaGTGTTCATCTATATCTTTC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLSVRD*CSSISF
Trigger: GAAAGATATAGATGAACATCAGTCTCTGACGGAGAG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAAGCTGATTATTAGTTaGATGGGAATAGAATGCCAC +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILKLIIS*MGIECH
Trigger: GTGGCATTCTATTCCCATTCAACTAATAATCAGCTT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAGCATCTTACTAGGCTaGAACAATTTCAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSILLG*NNFSLI
Trigger: AATCAAGCTGAAATTGTTTCAGCCTAGTAAGATGCT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCTTCGACCTTGGATTaGATTTCCCTTAGCCTACAT +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSSTLD*ISLSLH
Trigger: ATGTAGGCTAAGGGAAATTCAATCCAAGGTCGAAGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR TCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAATAGTCATTGTGGTCTaGGCAGTAATTTCCTATTCT +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKIVIVV*AVISYS
Trigger: AGAATAGGAAATTACTGCTCAGACCACAATGACTAT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATTAGGTCCTCTTGCATaGCTGAGAATATTGAGTATT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILLGPLA*LRILSI
Trigger: AATACTCAATATTCTCAGGCATGCAAGAGGACCTAA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGCATGCCTTAAGATTTaGTTCTATGTATACGCCAAT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILACLKI*FYVYAN
Trigger: ATTGGCGTATACATAGAAGCAAATCTTAAGGCATGC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGATACTGTGATGCCATaGCGTGCACTTCATTTTTAC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRDTVMP*RALHFY
Trigger: GTAAAAATGAAGTGCACGGCATGGCATCACAGTATC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTCATACTCTTTATTTaGGTTCCAGAGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRFILFI*VPERGV
Trigger: CACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAAGGTAGTACTTTCTTaGGAAACAGGGTATTGTGTA +
Preference number: 4 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKKVVLS*ETGYCV
Trigger: TACACAATACCCTGTTTCCCAAGAAAGTACTACCTT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAACGTCCATGTTTCTCTaGAAAAGTGAACGTAAAATA +
Preference number: 4 (lower is better)
Translates to: LANYKWARYLTSLCSFLQTSMFL*KSERKI
Trigger: TATTTTACGTTCACTTTTCCAGAGAAACATGGACGT...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCAGCTTATTCTTGGTaGGTTAGCGGAAACATTACA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSAYSW*VSGNIT
Trigger: TGTAATGTTTCCGCTAACTCACCAAGAATAAGCTGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR GCA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAGGCACTTGAAATACTaGATTTTATGTGTAGCTACT +
Preference number: 4 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILRHLKY*ILCVAT
Trigger: AGTAGCTACACATAAAATGCAGTATTTCAAGTGCCT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp GAATTATTTAATGCACACAACATCCTAAGAAGGCAGGGCTCCACATTTTACAAATTCATACTCTTTATTTaGGTTCCAGAGAGGGGAGTG +
Preference number: 4 (lower is better)
Translates to: ELFNAHNILRRQGSTFYKFILFI*VPERGV
Trigger: CACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAA...TTTGTAAAATGTGGAGCCCTGCCTTCTTAGGATGTTGTGTGCATTAAATAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR TCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAAGCTGATTATTAGTTaGATGGGAATAGAATGCCAC +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRKLIIS*MGIECH
Trigger: GTGGCATTCTATTCCCATTCAACTAATAATCAGCTT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CCA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAAGGTAGTACTTTCTTaGGAAACAGGGTATTGTGTA +
Preference number: 4 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRKVVLS*ETGYCV
Trigger: TACACAATACCCTGTTTCCCAAGAAAGTACTACCTT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 90 bp GCACCGCGAACGCTTCGCACGTCCGGAGCGGTCTCAGCAGCCCCATaGGCTGGCCCCGAGCTGGCGGACCCTGACTGCAACTGCGGCCCT +
Preference number: 5 (lower is better)
Translates to: APRTLRTSGAVSAAP*AGPELADPDCNCGP
Trigger: AGGGCCGCAGTTGCAGTCAGGGTCCGCCAGCTCGGGGCCAGCGCATGGGGCTGCTGAGACCGCTCCGGACGTGCGAAGCGTTCGCGGTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000475851.1
CDS CCA 90 bp GCACGTCCGGAGCGGTCTCAGCAGCCCCATGCGCTGGCCCCGAGCTaGCGGACCCTGACTGCAACTGCGGCCCTCCAACCGCAGCCCAAA +
Preference number: 5 (lower is better)
Translates to: ARPERSQQPHALAPS*RTLTATAALQPQPK
Trigger: TTTGGGCTGCGGTTGGAGGGCCGCAGTTGCAGTCAGGGTCCGCCAGCTCGGGGCCAGCGCATGGGGCTGCTGAGACCGCTCCGGACGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000475851.1
CDS CCA 90 bp CCGAGGGCCTGGCTGCTCCCCAGACTGCCTTCCCCTGCGGAGTCGTaGGCACGGACGAAGGAGCGCAGGAAACAGGGATTCTGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PRAWLLPRLPSPAES*ARTKERRKQGFWPS
Trigger: TGAGGGCCAGAATCCCTGTTTCCTGCGCTCCTTCGTCCGTGCCCACGACTCCGCAGGGGAAGGCAGTCTGGGGAGCAGCCAGGCCCTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS CCA 90 bp AGGAAGGTTCCTGGGGGACGACCGGCTCCAGGGAGGAGGAGACCTTaGCCAGAGAACCACCACGAGGCTCCGCCCTCTCCTGGTGACCCT +
Preference number: 5 (lower is better)
Translates to: RKVPGGRPAPGRRRP*PENHHEAPPSPGDP
Trigger: AGGGTCACCAGGAGAGGGCGGAGCCTCGTGGTGGTTCTCTGGCCAAGGTCTCCTCCTCCCTGGAGCCGGTCGTCCCCCAGGAACCTTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000475851.1
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp GACCTCTCAGCTACGGGCTCTCTGTTGGCATCACTGGCCTGTGGCTaGTGGGCTCTAGAGGGGCCGCCAGGGTCAGTCCCAATCCAGCAA +
Preference number: 5 (lower is better)
Translates to: DLSATGSLLASLACG*WALEGPPGSVPIQQ
Trigger: TTGCTGGATTGGGACTGACCCTGGCGGCCCCTCTAGAGCCCACCAGCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAGCTGAGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CCA 90 bp GAAGCTATCCAGGTCTACCCCGGAGTCCTGCAGGACAGGGTCAGCTaGCACACGGCTATCAAGGTGCTTTGGGAGCTGAGGCCCGGGCCT +
Preference number: 5 (lower is better)
Translates to: EAIQVYPGVLQDRVS*HTAIKVLWELRPGP
Trigger: AGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTGCAGGACTCCGGGGTAGACCTGGATAGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp CCTCAGGGCTGGCTCTCTGCGCTCCCAACGAGCATCCCTACTGCCTaGGGCTCTGGGGGTAGATGCAAGTTGGCTCCAAGATGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: PQGWLSALPTSIPTA*GSGGRCKLAPRCQA
Trigger: GGCTTGGCATCTTGGAGCCAACTTGCATCTACCCCCAGAGCCCCAGGCAGTAGGGATGCTCGTTGGGAGCGCAGAGAGCCAGCCCTGAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp AAGGTGCTTGCCTATAGTCAGCCGGTCCTTCGCACCCCTCAGGGCTaGCTCTCTGCGCTCCCAACGAGCATCCCTACTGCCTGGGGCTCT +
Preference number: 5 (lower is better)
Translates to: KVLAYSQPVLRTPQG*LSALPTSIPTAWGS
Trigger: AGAGCCCCAGGCAGTAGGGATGCTCGTTGGGAGCGCAGAGAGCCAGCCCTGAGGGGTGCGAAGGACCGGCTGACTATAGGCAAGCACCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS-3UTR CAA 90 bp GCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCGGCTATCAAGGTGCTTaGGGAGCTGAGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: ALQVGMEQPRRGVPAMETGYQGA*GAEARA
Trigger: GGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCC...GGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS GCA 90 bp GCAGCACACAGGCCCAGTACTCAGCCTGGAAGGAGAGGCGTCTCCTaGCTAGCCCAGAAGCATCACCCCCAGAGAACACAGGCTGTGGTG +
Preference number: 5 (lower is better)
Translates to: AAHRPSTQPGRRGVS*LAQKHHPQRTQAVV
Trigger: CACCACAGCCTGTGTTCTCTGGGGGTGATGCTTCTGGGCTAGGCAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGCCTGTGTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS GCA 90 bp CACCCTCTGTCCCGTGTCCTTAGCTGGGGAGAGCCCATATCAAGGTaGTTGCCTATAGTCAGCCGGTCCTTCGCACCCCTCAGGGCTGGC +
Preference number: 5 (lower is better)
Translates to: HPLSRVLSWGEPISR*LPIVSRSFAPLRAG
Trigger: GCCAGCCCTGAGGGGTGCGAAGGACCGGCTGACTATAGGCAAGCACCTTGATATGGGCTCTCCCCAGCTAAGGACACGGGACAGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp GATGGAGGCAGGGAATCTGGCAGCACACAGGCCCAGTACTCAGCCTaGAAGGAGAGGCGTCTCCTGCCTAGCCCAGAAGCATCACCCCCA +
Preference number: 5 (lower is better)
Translates to: DGGRESGSTQAQYSA*KERRLLPSPEASPP
Trigger: TGGGGGTGATGCTTCTGGGCTAGGCAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGCCTGTGTGCTGCCAGATTCCCTGCCTCCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS-3UTR CAA 90 bp CCCAGCCTTGCAGGTAGGAATGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAAGGGGCTCTGCCCTTaGATATCCCCAGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: PSLAGRNGAAQKRRACHGKGLCP*ISPVGR
Trigger: CCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCTT...TCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCATTCCTACCTGCAAGGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS CCA 90 bp TCTGGAGGGCCACTGCTTAAGGCTTGGCTCTCTGGGCCCAGAAAATaGCAGGGCAGTGGCCTCTGCTGGTGGGCAGTTGGGGGAGACATT +
Preference number: 5 (lower is better)
Translates to: SGGPLLKAWLSGPRK*QGSGLCWWAVGGDI
Trigger: AATGTCTCCCCCAACTGCCCACCAGCAGAGGCCACTGCCCTGCCATTTTCTGGGCCCAGAGAGCCAAGCCTTAAGCAGTGGCCCTCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp GTCCTGCAGGACAGGGTCAGCTGGCACACGGCTATCAAGGTGCTTTaGGAGCTGAGGCCCGGGCCTCAGTGGGTAAGTATAGTCAAGCAG +
Preference number: 5 (lower is better)
Translates to: VLQDRVSWHTAIKVL*ELRPGPQWVSIVKQ
Trigger: CTGCTTGACTATACTTACCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTGCAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp CCCCAGATCCTTGGAGGGCAGCTCCAGGGGGAAGCTGGCTTTGGCTaGAGCTTGAAGGGAAGGAAGCTGGCCCATCACTGTCTGACACTT +
Preference number: 5 (lower is better)
Translates to: PQILGGQLQGEAGFG*SLKGRKLAHHCLTL
Trigger: AAGTGTCAGACAGTGATGGGCCAGCTTCCTTCCCTTCAAGCTCCAGCCAAAGCCAGCTTCCCCCTGGAGCTGCCCTCCAAGGATCTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS GCA 90 bp CTTGCTGGAGAGACAGAGAAGCTATCCAGGTCTACCCCGGAGTCCTaGAGGACAGGGTCAGCTGGCACACGGCTATCAAGGTGCTTTGGG +
Preference number: 5 (lower is better)
Translates to: LAGETEKLSRSTPES*RTGSAGTRLSRCFG
Trigger: CCCAAAGCACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTGCAGGACTCCGGGGTAGACCTGGATAGCTTCTCTGTCTCTCCAGCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp GATGCAAGTTGGCTCCAAGATGCCAAGCCCATGCCACCCTGTTTCTaGGGTACTCTGGAGGGCCACTGCTTAAGGCTTGGCTCTCTGGGC +
Preference number: 5 (lower is better)
Translates to: DASWLQDAKPMPPCF*GTLEGHCLRLGSLG
Trigger: GCCCAGAGAGCCAAGCCTTAAGCAGTGGCCCTCCAGAGTACCCCAGAAACAGGGTGGCATGGGCTTGGCATCTTGGAGCCAACTTGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS TCA 90 bp TCCACTGTGACAGGCAAGAGAGACCTGAGCTGTGAGGCTGCTGGCTaGGGTCCAGTGCCTGGGGCAAATCTGCTAGGGATGGATCATCTT +
Preference number: 5 (lower is better)
Translates to: STVTGKRDLSCEAAG*GPVPGANLLGMDHL
Trigger: AAGATGATCCATCCCTAGCAGATTTGCCCCAGGCACTGGACCTCAGCCAGCAGCCTCACAGCTCAGGTCTCTCTTGCCTGTCACAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000475851.1
ENST00000497039.1
ENST00000537589.1
CDS TCA 90 bp TTCATACTCTTTATTTGGGTTCCAGAGAGGGGAGTGGCGGTCGGGTaGTGGAGGCAGGGAATCTGGCAGCACACAGGCCCAGTACTCAGC +
Preference number: 5 (lower is better)
Translates to: FILFIWVPERGVAVG*WRQGIWQHTGPVLS
Trigger: GCTGAGTACTGGGCCTGTGTGCTGCCAGATTCCCTGCCTCCATCACCCGACCGCCACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS TCA 90 bp GGCAGTGGCCTCTGCTGGTGGGCAGTTGGGGGAGACATTAGTAGGTaGTTTGAGGGTGCTTGCTGGAGAGACAGAGAAGCTATCCAGGTC +
Preference number: 5 (lower is better)
Translates to: GSGLCWWAVGGDISR*FEGACWRDREAIQV
Trigger: GACCTGGATAGCTTCTCTGTCTCTCCAGCAAGCACCCTCAAATCACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGAGGCCACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS TCA 90 bp TGCCTGAGGCAAGAACCAGGCAATATGCACTGCCAGCAGCAGCACTaGGACCCTGCCTGTCTGGGAAGCAAGATGACTCCCATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: CLRQEPGNMHCQQQH*DPACLGSKMTPISS
Trigger: ACTGGAGATGGGAGTCATCTTGCTTCCCAGACAGGCAGGGTCTCAGTGCTGCTGCTGGCAGTGCATATTGCCTGGTTCTTGCCTCAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS GCA 90 bp AGCCAGCATGTCCAGAGAGGCCAAGATAGAGTCATACAGGCGATCTaGGTGGCTCTCCAGCTCACCAGACTGCTTTGCGATCCTCCCAAG +
Preference number: 5 (lower is better)
Translates to: SQHVQRGQDRVIQAI*VALQLTRLLCDPPK
Trigger: CTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGACTCTATCTTGGCCTCTCTGGACATGCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 90 bp GCAAGAACCAGGCAATATGCACTGCCAGCAGCAGCACTGAGACCCTaGCTGTCTGGGAAGCAAGATGACTCCCATCTCCAGTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: ARTRQYALPAAALRP*LSGKQDDSHLQSSP
Trigger: TGGAGAGGACTGGAGATGGGAGTCATCTTGCTTCCCAGACAGGCAGGGTCTCAGTGCTGCTGCTGGCAGTGCATATTGCCTGGTTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS-3UTR CAA 90 bp CCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCATTACTAAGGATCCCCAGATCCTaGGAGGGCAGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: PEEACLPWKPILGSAPLLRIPRS*EGSSRG
Trigger: CCCCCTGGAGCTGCCCTCCAAGGATCTGGGGATCCT...TAGTAATGGTGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS GCA 90 bp GGGAAGGAAGCTGGCCCATCACTGTCTGACACTTCCAAGGGGCTCTaGCCTTTGATATCCCCAGTGGGCAGGGTAACCAAGGTAGAAATG +
Preference number: 5 (lower is better)
Translates to: GKEAGPSLSDTSKGL*PLISPVGRVTKVEM
Trigger: CATTTCTACCTTGGTTACCCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCTTGGAAGTGTCAGACAGTGATGGGCCAGCTTCCTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS CCA 90 bp TCAAGCAGATCTTCATACTCTTTATTTGGGTTCCAGAGAGGGGAGTaGCGGTCGGGTGATGGAGGCAGGGAATCTGGCAGCACACAGGCC +
Preference number: 5 (lower is better)
Translates to: SSRSSYSLFGFQRGE*RSGDGGRESGSTQA
Trigger: GGCCTGTGTGCTGCCAGATTCCCTGCCTCCATCACCCGACCGCCACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAAGATCTGCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 90 bp AGCATGTCCAGAGAGGCCAAGATAGAGTCATACAGGCGATCTGCGTaGCTCTCCAGCTCACCAGACTGCTTTGCGATCCTCCCAAGGACA +
Preference number: 5 (lower is better)
Translates to: SMSREAKIESYRRSA*LSSSPDCFAILPRT
Trigger: TGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGACTCTATCTTGGCCTCTCTGGACATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGGGGGGTAGATGCAAGTaGGCTCCAAGATGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWGGRCK*APRCQA
Trigger: GGCTTGGCATCTTGGAGCCAACTTGCATCTACCCCC...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS GCA 90 bp TGCACCAGTGATTCTTTTCCCTGTTCTCCTCCTTTCCTGGGAAGCTaGCCTTCAACATCTGGGTCTGAGAATGGCCACCGGTCCAACCTG +
Preference number: 5 (lower is better)
Translates to: CTSDSFPCSPPFLGS*PSTSGSENGHRSNL
Trigger: CAGGTTGGACCGGTGGCCATTCTCAGACCCAGATGTTGAAGGGCAGCTTCCCAGGAAAGGAGGAGAACAGGGAAAAGAATCACTGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGCTACGGGCTCTCTGTaGGCATCACTGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRATGSL*ASLACG
Trigger: GCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAGC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGGCTATCAAGGTGCTTaGGGAGCTGAGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVGYQGA*GAEARA
Trigger: GGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CAAGCCAGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGTCTGCTGGTGGGCAGTaGGGGGAGACATTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: QARARTAYYPVKLQRRLESAGGQ*GETLVG
Trigger: ACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGA...CTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCTGGCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS GCA 90 bp ATAGAGTCATACAGGCGATCTGCGTGGCTCTCCAGCTCACCAGACTaGTTTGCGATCCTCCCAAGGACATCCTCTAAAACTGGGGTGTTC +
Preference number: 5 (lower is better)
Translates to: IESYRRSAWLSSSPD*FAILPRTSSKTGVF
Trigger: GAACACCCCAGTTTTAGAGGATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGACTCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 90 bp TGCACCAGTGATTCTTTTCCCTGTTCTCCTCCTTTCCTGGGAAGCTaGCCTTCAACATCTGGGTCTGAGAATGGCCACCGGTCCAACCTA +
Preference number: 5 (lower is better)
Translates to: CTSDSFPCSPPFLGS*PSTSGSENGHRSNL
Trigger: TAGGTTGGACCGGTGGCCATTCTCAGACCCAGATGTTGAAGGGCAGCTTCCCAGGAAAGGAGGAGAACAGGGAAAAGAATCACTGGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS-3UTR CAA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAACCTGGGTCTCATTCTaGGCTCAAGCCCTTGCTAAT +
Preference number: 5 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNETWVSF*AQALAN
Trigger: ATTAGCAAGGGCTTGAGCCAAGAATGAGACCCAGGT...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp TGGAGCAGCCCAGAAGAGGCGTGCCTGCCATGGAAACCAATTCTTGGATCAGCACCAATGCCCCTAACTTaGCACTTAAACCACTGTGGC +
Preference number: 5 (lower is better)
Translates to: WSSPEEACLPWKPILGSAPMPLT*HLNHCG
Trigger: GCCACAGTGGTTTAAGTGCAAAGTTAGGGGCATTGG...TGCTGATCCAAGAATTGGTTTCCATGGCAGGCACGCCTCTTCTGGGCTGCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS TCA 90 bp GACAGCACAGTGTTGAAGGACATGGGTTTTGGAGCCAGACAAACCTaGGGCCAGCCCCTAACTTTGCCACCTTCCAGATGTATGACTTCG +
Preference number: 5 (lower is better)
Translates to: DSTVLKDMGFGARQT*GQPLTLPPSRCMTS
Trigger: CGAAGTCATACATCTGGAAGGTGGCAAAGTTAGGGGCTGGCCTCAGGTTTGTCTGGCTCCAAAACCCATGTCCTTCAACACTGTGCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAGGCTATCAAGGTGCTTaGGGAGCTGAGGCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILGYQGA*GAEARA
Trigger: GGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCC...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp TGCTCACCTGTCCCGACTCCACGACTCTGTACCTCCCTCTGCCAAAGCAATGAAACATTAGTAGGTGATTaGAGGGTGCTTGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: CSPVPTPRLCTSLCQSNETLVGD*RVLAGE
Trigger: CTCTCCAGCAAGCACCCTCAAATCACCTACTAATGT...TTCATTGCTTTGGCAGAGGGAGGTACAGAGTCGTGGAGTCGGGACAGGTGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp AGAGCCAGGACCGCATATTACCCGGTAAAGCTGCAGAGAAGACTTGAGACTTGTCCCATATCAAGGTGCTaGCCTATAGTCAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: RARTAYYPVKLQRRLETCPISRC*PIVSRS
Trigger: GGACCGGCTGACTATAGGCAAGCACCTTGATATGGG...ACAAGTCTCAAGTCTTCTCTGCAGCTTTACCGGGTAATATGCGGTCCTGGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAGCCGCCATGGGCTTTTaGTCAGGGATAAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRAAMGF*SGIRVQ
Trigger: CTGCACCCTTATCCCTGACAAAAAGCCCATGGCGGC...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAGGATCCCCAGATCCTaGGAGGGCAGCTCCAGGGGG +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILRIPRS*EGSSRG
Trigger: CCCCCTGGAGCTGCCCTCCAAGGATCTGGGGATCCT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS TCA 90 bp TCATGTCCTGAGCAAATAGTTGTTGTTCTGGGAAGGCTCAGAGTCTaGGGGAACTCCTCGGAGGAAGAAAGCTTGGTCTTCTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SCPEQIVVVLGRLRV*GNSSEEESLVFSTW
Trigger: CCAGGTGGAGAAGACCAAGCTTTCTTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCCCAGAACAACAACTATTTGCTCAGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS TCA 90 bp TCATGTCCTGAGCAAATAGTTGTTGTTCTGGGAAGGCTCAGAGTCTaGGGGAACTCCTCGGAGGAAGAAAGCTTGGTCTTCTCCACCGCA +
Preference number: 5 (lower is better)
Translates to: SCPEQIVVVLGRLRV*GNSSEEESLVFSTA
Trigger: TGCGGTGGAGAAGACCAAGCTTTCTTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCCCAGAACAACAACTATTTGCTCAGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000475851.1
ENST00000537589.1
CDS TCA 90 bp TCATGTCCTGAGCAAATAGTTGTTGTTCTGGGAAGGCTCAGAGTCTaGGGGAACTCCTCGGAGGAAGAAAGCTTGGTCTTCTCCACCTGC +
Preference number: 5 (lower is better)
Translates to: SCPEQIVVVLGRLRV*GNSSEEESLVFSTC
Trigger: GCAGGTGGAGAAGACCAAGCTTTCTTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCCCAGAACAACAACTATTTGCTCAGGACATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS CCA 90 bp TGGGAAGGCTCAGAGTCTGAGGGAACTCCTCGGAGGAAGAAAGCTTaGTCTTCTCCACCTGCAATGATCAAAGGGACAAAAAGCACTTGG +
Preference number: 5 (lower is better)
Translates to: WEGSESEGTPRRKKA*SSPPAMIKGTKSTW
Trigger: CCAAGTGCTTTTTGTCCCTTTGATCATTGCAGGTGGAGAAGACCAAGCTTTCTTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGGGGGTAGATGCAAGTaGGCTCCAAGATGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVGGRCK*APRCQA
Trigger: GGCTTGGCATCTTGGAGCCAACTTGCATCTACCCCC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGATGTTTGGCCGACAGGTaGCACCTCTGCCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRCLADR*HLCLRR
Trigger: TCTTCTCAGGCAGAGGTGCAACCTGTCGGCCAAACA...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTCACTAGCCAGTGTTaGGCCGACAGGTTGCACCTC +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLTSQC*ADRLHL
Trigger: GAGGTGCAACCTGTCGGCCAAACACTGGCTAGTGAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTTCGGAGGAAGAAAGCTaGGTCTTCTCCACCGCACCG +
Preference number: 5 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCSEEES*VFSTAP
Trigger: CGGTGCGGTGGAGAAGACCAAGCTTTCTTCCTCCGA...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp AGCTGCAGAGAAGACTTGAGACTTGTAAGATTGGACCTGGCTGCAGTCCCGTGGACTAGAATCAGCATCTaGGAGCCAGATACGTCCATG +
Preference number: 5 (lower is better)
Translates to: SCREDLRLVRLDLAAVPWTRISI*EPDTSM
Trigger: CATGGACGTATCTGGCTCCAAGATGCTGATTCTAGT...CCACGGGACTGCAGCCAGGTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS CCA 90 bp CACACGGCTATCAAGGTGCTTTGGGAGCTGAGGCCCGGGCCTCAGTaGGTAAGTATAGTCAAGCAGATCTTCATACTCTTTATTTGGGTT +
Preference number: 5 (lower is better)
Translates to: HTAIKVLWELRPGPQ*VSIVKQIFILFIWV
Trigger: AACCCAAATAAAGAGTATGAAGATCTGCTTGACTATACTTACCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCCGTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAAAGGGGCTCTGCCCTTaGATATCCCCAGTGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILKGLCP*ISPVGR
Trigger: CCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCTT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377990.7
CDS GCA 90 bp GGGTCTAGACAGTATTTAGGAAAGACCTTAAAATGCAAAGTCTGCTaGCTGAGGCAAGAACCAGGCAATATGCACTGCCAGCAGCAGCAC +
Preference number: 5 (lower is better)
Translates to: GSRQYLGKTLKCKVC*LRQEPGNMHCQQQH
Trigger: GTGCTGCTGCTGGCAGTGCATATTGCCTGGTTCTTGCCTCAGGCAGCAGACTTTGCATTTTAAGGTCTTTCCTAAATACTGTCTAGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGCTACGGGCTCTCTGTaGGCATCACTGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRATGSL*ASLACG
Trigger: GCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAGC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGGGGGTAGATGCAAGTaGGCTCCAAGATGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKGGRCK*APRCQA
Trigger: GGCTTGGCATCTTGGAGCCAACTTGCATCTACCCCC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGCCGCCATGGGCTTTTaGTCAGGGATAAGGGTGCAG +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKAAMGF*SGIRVQ
Trigger: CTGCACCCTTATCCCTGACAAAAAGCCCATGGCGGC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCATCTCCTACCAGCCCTaGGTAAATGACCCTACCAGG +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVISYQP*VNDPTR
Trigger: CCTGGTAGGGTCATTTACCAAGGGCTGGTAGGAGAT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 90 bp TGTGGGTCTAGACAGTATTTAGGAAAGACCTTAAAATGCAAAGTCTaGTGCCTGAGGCAAGAACCAGGCAATATGCACTGCCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: CGSRQYLGKTLKCKV*CLRQEPGNMHCQQQ
Trigger: CTGCTGCTGGCAGTGCATATTGCCTGGTTCTTGCCTCAGGCAGCAGACTTTGCATTTTAAGGTCTTTCCTAAATACTGTCTAGACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAACATTAGTAGGTGATTaGAGGGTGCTTGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRTLVGD*RVLAGE
Trigger: CTCTCCAGCAAGCACCCTCAAATCACCTACTAATGT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATCTGCTGGTGGGCAGTaGGGGGAGACATTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILSAGGQ*GETLVG
Trigger: ACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACCCATATCAAGGTGCTaGCCTATAGTCAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKPISRC*PIVSRS
Trigger: GGACCGGCTGACTATAGGCAAGCACCTTGATATGGG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACCCATATCAAGGTGCTaGCCTATAGTCAGCCGGTCC +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILPISRC*PIVSRS
Trigger: GGACCGGCTGACTATAGGCAAGCACCTTGATATGGG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAGCTCACCAGACTGCTTaGCGATCCTCCCAAGGACAT +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKAHQTA*RSSQGH
Trigger: ATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGC...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACACATGGGTGCTCCATaGCCGCCATGGGCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKHMGAP*PPWAFC
Trigger: ACAAAAAGCCCATGGCGGCAATGGAGCACCCATGTG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACACATGGGTGCTCCATaGCCGCCATGGGCTTTTTGT +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILHMGAP*PPWAFC
Trigger: ACAAAAAGCCCATGGCGGCAATGGAGCACCCATGTG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTATGTTTGGCCGACAGGTaGCACCTCTGCCTGAGAAGA +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILCLADR*HLCLRR
Trigger: TCTTCTCAGGCAGAGGTGCAACCTGTCGGCCAAACA...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCCCTTGACTTCAGTGTaGAATGGCTCTTGCAAGGAC +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVPLTSV*NGSCKD
Trigger: GTCCTTGCAAGAGCCATTCAACACTGAAGTCAAGGG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGACTTCATACTCTTTATTaGGGTTCCAGAGAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRLHTLY*GSREGS
Trigger: ACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAAG...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCACATTAGTAGGTGATTaGAGGGTGCTTGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVTLVGD*RVLAGE
Trigger: CTCTCCAGCAAGCACCCTCAAATCACCTACTAATGT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTGACGTCGTCTTCCATTTGCTGAGCTTACCTATGGATCTCCAAGAACCCAGAAGCAAGCTCAGCTACTaGACTCTAATTTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: VDVVFHLLSLPMDLQEPRSKLSY*TLIWPC
Trigger: ACATGGCCAAATTAGAGTCAAGTAGCTGAGCTTGCT...TCTGGGTTCTTGGAGATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCACTGCTGATCCAGCTTaGAGTATCATCACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVTADPA*SIITSL
Trigger: CAGGGAAGTGATGATACTCAAAGCTGGATCAGCAGT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCGACGTCGTCTTCCATTaGCTGAGCTTACCTATGGAT +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVDVVFH*LSLPMD
Trigger: ATCCATAGGTAAGCTCAGCAAATGGAAGACGACGTC...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 90 bp TGTACACAAAGCTTCCTAACGTTGAGTGTCATTACCTTCACACATTaGACCAGTGATTCTTTTCCCTGTTCTCCTCCTTTCCTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: CTQSFLTLSVITFTH*TSDSFPCSPPFLGS
Trigger: GCTTCCCAGGAAAGGAGGAGAACAGGGAAAAGAATCACTGGTGCAATGTGTGAAGGTAATGACACTCAACGTTAGGAAGCTTTGTGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCTGCTGGTGGGCAGTaGGGGGAGACATTAGTAGGT +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSAGGQ*GETLVG
Trigger: ACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAGCTCACCAGACTGCTTaGCGATCCTCCCAAGGACAT +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRAHQTA*RSSQGH
Trigger: ATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGC...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTCAAAATAGCCGTGTaGACGTCGTCTTCCATTTGC +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVFKIAV*TSSSIC
Trigger: GCAAATGGAAGACGACGTCAACACGGCTATTTTGAA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATCGGAGGAAGAAAGCTaGGTCTTCTCCACCTGGCTT +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSEEES*VFSTWL
Trigger: AAGCCAGGTGGAGAAGACCAAGCTTTCTTCCTCCGA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAAGCTGCAGAGAAGACTaGAGACTTGTAAGATTGGAC +
Preference number: 5 (lower is better)
Translates to: LANYKWARYLTSLCSFLQSCRED*RLVRLD
Trigger: GTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATTGAAGGTTTCCCCCTaGACTTCAGTGTTGAATGGC +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLKVSP*TSVLNG
Trigger: GCCATTCAACACTGAAGTCAAGGGGGAAACCTTCAA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAAAGCTACACGCTCTTaGTGGAGAAGCACCAAAAGG +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKKATRS*WRSTKR
Trigger: CCTTTTGGTGCTTCTCCACAAAGAGCGTGTAGCTTT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCCTAATTTGGCCATGTTaGCTCATAGAAATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLIWPC*LIEMLL
Trigger: CAGCAGCATTTCTATGAGCAAACATGGCCAAATTAG...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACTTCATACTCTTTATTaGGGTTCCAGAGAGGGGAGT +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILLHTLY*GSREGS
Trigger: ACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAAG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCACCAGGTGGAATAGTTaGAGCTTTATCTGCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVTRWNS*SFICSF
Trigger: AAAAGAGCAGATAAAGCTCAAACTATTCCACCTGGT...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTGGGAAACAGGGTATaGTGTAACATTCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVLGNRV*CNILCK
Trigger: TTTGCACAGAATGTTACACAATACCCTGTTTCCCAA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATGCCCAGCCTTCAGCTaGAGTTTTAAGGTAAGTCTT +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKCPAFS*SFKVSL
Trigger: AAGACTTACCTTAAAACTCAAGCTGAAGGCTGGGCA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAGCAAGCTCAGCTACTaGACTCTAATTTGGCCATGT +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSKLSY*TLIWPC
Trigger: ACATGGCCAAATTAGAGTCAAGTAGCTGAGCTTGCT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAACAAAGCTTCCTAACGTaGAGTGTCATTACCTTCACA +
Preference number: 5 (lower is better)
Translates to: LANYKWARYLTSLCSFLQQSFLT*SVITFT
Trigger: TGTGAAGGTAATGACACTCAACGTTAGGAAGCTTTG...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAACAGATATTAAGTCATTaGGTTCACAAGATGGTCCGG +
Preference number: 5 (lower is better)
Translates to: LANYKWARYLTSLCSFLQQILSH*VHKMVR
Trigger: CCGGACCATCTTGTGAACCAAATGACTTAATATCTG...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp CTTCTTTGTGTTCCATTCCCACCTAAGCTTCAAAATAGCCGTGTTGACGTCGTCTTTAAAGCTAGTATATaGAAGGTTTCCCCCTTGACT +
Preference number: 5 (lower is better)
Translates to: LLCVPFPPKLQNSRVDVVFKASI*KVSPLT
Trigger: AGTCAAGGGGGAAACCTTCAATATACTAGCTTTAAA...GACGACGTCAACACGGCTATTTTGAAGCTTAGGTGGGAATGGAACACAAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp AGCTCTAGAAGTCCTGCAGTCAAGAAAGCCACTTACCTTTGTTTAGCCCAGTGTTGCACAAAACCTTTTTaGTTCAGAATACCTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SSRSPAVKKATYLCLAQCCTKPF*FRIPLS
Trigger: ACTCAGAGGTATTCTGAACAAAAAAGGTTTTGTGCA...ACACTGGGCTAAACAAAGGTAAGTGGCTTTCTTGACTGCAGGACTTCTAGAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp CTTGCTAATTATAAGTGGGCACGTTACCTAACCTCTCTCTGCTCTTTCCTCCAAATCTTCAAGCTCCATTaGGCCTGGGAAATAATTCAT +
Preference number: 5 (lower is better)
Translates to: LANYKWARYLTSLCSFLQIFKLH*AWEIIH
Trigger: ATGAATTATTTCCCAGGCCAAATGGAGCTTGAAGAT...TTGGAGGAAAGAGCAGAGAGAGGTTAGGTAACGTGCCCACTTATAATTAGCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGAAGCTGCAGAGAAGACTaGAGACTTGTAAGATTGGAC +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRSCRED*RLVRLD
Trigger: GTCCAATCTTACAAGTCTCAAGTCTTCTCTGCAGCT...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAAAGTTACCCTTTAAGCTaGATAATTAGCTCCATAGCC +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKSYPLS*IISSIA
Trigger: GGCTATGGAGCTAATTATCAAGCTTAAAGGGTAACT...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAATTGGGAAACAGGGTATaGTGTAACATTCTGTGCAAA +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLGNRV*CNILCK
Trigger: TTTGCACAGAATGTTACACAATACCCTGTTTCCCAA...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp GTTACTGTGCTTTCCTCCTTCCAGGTTCATTCATGGCCCAACAGAACTTTAAAACTACTTGACTCTAATTaGGCCATGTTTGCTCATAGA +
Preference number: 5 (lower is better)
Translates to: VTVLSSFQVHSWPNRTLKLLDSN*AMFAHR
Trigger: TCTATGAGCAAACATGGCCAAATTAGAGTCAAGTAG...TTTTAAAGTTCTGTTGGGCCATGAATGAACCTGGAAGGAGGAAAGCACAGTAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTACTACTTGACTCTAATTaGGCCATGTTTGCTCATAGA +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILLLDSN*AMFAHR
Trigger: TCTATGAGCAAACATGGCCAAATTAGAGTCAAGTAG...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGATTCAAAATAGCCGTGTaGACGTCGTCTTCCATTTGC +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRFKIAV*TSSSIC
Trigger: GCAAATGGAAGACGACGTCAACACGGCTATTTTGAA...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACCCTTAGCCTACATCTaGCCTTTCCAGCATATCTTA +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRPLAYI*PFQHIL
Trigger: TAAGATATGCTGGAAAGGCAAGATGTAGGCTAAGGG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp CTTGACTCTAATTTGGCCATGTTTGCTCATAGAAATGCTGCTGGCAGCATCTTAATCTTTAAAGAGGGATaGACAAGCCCAAATTTCCTT +
Preference number: 5 (lower is better)
Translates to: LDSNLAMFAHRNAAGSILIFKEG*TSPNFL
Trigger: AAGGAAATTTGGGCTTGTCAATCCCTCTTTAAAGAT...TAAGATGCTGCCAGCAGCATTTCTATGAGCAAACATGGCCAAATTAGAGTCAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS-3UTR CAA 90 bp TTCCCCATGGCAGTAAAGATTGGGATTTACAACAAATTTCAGCATGCCTTAAGACTTTTTCCTTCACTATaGACAGCTTCAGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: FPMAVKIGIYNKFQHALRLFPSL*TASVSV
Trigger: TACAGAAACTGAAGCTGTCAATAGTGAAGGAAAAAG...TCTTAAGGCATGCTGAAATTTGTTGTAAATCCCAATCTTTACTGCCATGGGGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 72 bp TGCGCTGGCCCCGAGCTGGCGGACCCTGACTGCAACTaGGGCCCTCCAACCGCAGCCCAAAACGCGCAGGGC +
Preference number: 6 (lower is better)
Translates to: CAGPELADPDCN*GPPTAAQNAQG
Trigger: GCCCTGCGCGTTTTGGGCTGCGGTTGGAGGGCCGCAGTTGCAGTCAGGGTCCGCCAGCTCGGGGCCAGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000475851.1
CDS CCA 72 bp GAGCGGTCTCAGCAGCCCCATGCGCTGGCCCCGAGCTaGCGGACCCTGACTGCAACTGCGGCCCTCCAACCG +
Preference number: 6 (lower is better)
Translates to: ERSQQPHALAPS*RTLTATAALQP
Trigger: CGGTTGGAGGGCCGCAGTTGCAGTCAGGGTCCGCCAGCTCGGGGCCAGCGCATGGGGCTGCTGAGACCGCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000475851.1
CDS GCA 72 bp ACGCTTCGCACGTCCGGAGCGGTCTCAGCAGCCCCATaGGCTGGCCCCGAGCTGGCGGACCCTGACTGCAAC +
Preference number: 6 (lower is better)
Translates to: TLRTSGAVSAAP*AGPELADPDCN
Trigger: GTTGCAGTCAGGGTCCGCCAGCTCGGGGCCAGCGCATGGGGCTGCTGAGACCGCTCCGGACGTGCGAAGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000475851.1
CDS CCA 72 bp GCGCCGGGCACTCTGGCTGGTCCTCTTCTCCCTCTCTaGCCTGGGCGAGGGCCACCCTCTGTCCCGTGTCCT +
Preference number: 6 (lower is better)
Translates to: APGTLAGPLLPL*PGRGPPSVPCP
Trigger: AGGACACGGGACAGAGGGTGGCCCTCGCCCAGGCCAGAGAGGGAGAAGAGGACCAGCCAGAGTGCCCGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp GCTACGGGCTCTCTGTTGGCATCACTGGCCTGTGGCTaGTGGGCTCTAGAGGGGCCGCCAGGGTCAGTCCCA +
Preference number: 6 (lower is better)
Translates to: ATGSLLASLACG*WALEGPPGSVP
Trigger: TGGGACTGACCCTGGCGGCCCCTCTAGAGCCCACCAGCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CCA 72 bp CTCAGCTACGGGCTCTCTGTTGGCATCACTGGCCTGTaGCTGGTGGGCTCTAGAGGGGCCGCCAGGGTCAGT +
Preference number: 6 (lower is better)
Translates to: LSYGLSVGITGL*LVGSRGAARVS
Trigger: ACTGACCCTGGCGGCCCCTCTAGAGCCCACCAGCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAGCTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CCA 72 bp GCCTATAGTCAGCCGGTCCTTCGCACCCCTCAGGGCTaGCTCTCTGCGCTCCCAACGAGCATCCCTACTGCC +
Preference number: 6 (lower is better)
Translates to: AYSQPVLRTPQG*LSALPTSIPTA
Trigger: GGCAGTAGGGATGCTCGTTGGGAGCGCAGAGAGCCAGCCCTGAGGGGTGCGAAGGACCGGCTGACTATAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp TGGCTGCTCCCCAGACTGCCTTCCCCTGCGGAGTCGTaGGCACGGACGAAGGAGCGCAGGAAACAGGGATTC +
Preference number: 6 (lower is better)
Translates to: WLLPRLPSPAES*ARTKERRKQGF
Trigger: GAATCCCTGTTTCCTGCGCTCCTTCGTCCGTGCCCACGACTCCGCAGGGGAAGGCAGTCTGGGGAGCAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS CAA 90 bp AGGCCACTGAGTGCAGGCTCAGACCTCTCAGCTACGGGCTCTCTGTaGGCATCACTGGCCTGTGGCTGGTGGGCTCTAGAGGGGCCGCCA +
Preference number: 6 (lower is better)
Translates to: RPLSAGSDLSATGSL*ASLACGWWALEGPP
Trigger: TGGCGGCCCCTCTAGAGCCCACCAGCCACAGGCCAGTGATGCCAACAGAGAGCCCGTAGCTGAGAGGTCTGAGCCTGCACTCAGTGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CCA 72 bp CAGGTCTACCCCGGAGTCCTGCAGGACAGGGTCAGCTaGCACACGGCTATCAAGGTGCTTTGGGAGCTGAGG +
Preference number: 6 (lower is better)
Translates to: QVYPGVLQDRVS*HTAIKVLWELR
Trigger: CCTCAGCTCCCAAAGCACCTTGATAGCCGTGTGCCAGCTGACCCTGTCCTGCAGGACTCCGGGGTAGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CAA 90 bp CCTCTGTCCCGTGTCCTTAGCTGGGGAGAGCCCATATCAAGGTGCTaGCCTATAGTCAGCCGGTCCTTCGCACCCCTCAGGGCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: PLSRVLSWGEPISRC*PIVSRSFAPLRAGS
Trigger: AGAGCCAGCCCTGAGGGGTGCGAAGGACCGGCTGACTATAGGCAAGCACCTTGATATGGGCTCTCCCCAGCTAAGGACACGGGACAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS GCA 72 bp AGGCCCAGTACTCAGCCTGGAAGGAGAGGCGTCTCCTaGCTAGCCCAGAAGCATCACCCCCAGAGAACACAG +
Preference number: 6 (lower is better)
Translates to: RPSTQPGRRGVS*LAQKHHPQRTQ
Trigger: CTGTGTTCTCTGGGGGTGATGCTTCTGGGCTAGGCAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp AGGGAATCTGGCAGCACACAGGCCCAGTACTCAGCCTaGAAGGAGAGGCGTCTCCTGCCTAGCCCAGAAGCA +
Preference number: 6 (lower is better)
Translates to: RESGSTQAQYSA*KERRLLPSPEA
Trigger: TGCTTCTGGGCTAGGCAGGAGACGCCTCTCCTTCCAGGCTGAGTACTGGGCCTGTGTGCTGCCAGATTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp AAACAGGGATTCTGGCCCTCAGGATCCCCAGATCCTTaGAGGGCAGCTCCAGGGGGAAGCTGGCTTTGGCTG +
Preference number: 6 (lower is better)
Translates to: KQGFWPSGSPDP*RAAPGGSWLWL
Trigger: CAGCCAAAGCCAGCTTCCCCCTGGAGCTGCCCTCCAAGGATCTGGGGATCCTGAGGGCCAGAATCCCTGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS GCA 72 bp TCCCGTGTCCTTAGCTGGGGAGAGCCCATATCAAGGTaGTTGCCTATAGTCAGCCGGTCCTTCGCACCCCTC +
Preference number: 6 (lower is better)
Translates to: SRVLSWGEPISR*LPIVSRSFAPL
Trigger: GAGGGGTGCGAAGGACCGGCTGACTATAGGCAAGCACCTTGATATGGGCTCTCCCCAGCTAAGGACACGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp GACAGGGTCAGCTGGCACACGGCTATCAAGGTGCTTTaGGAGCTGAGGCCCGGGCCTCAGTGGGTAAGTATA +
Preference number: 6 (lower is better)
Translates to: DRVSWHTAIKVL*ELRPGPQWVSI
Trigger: TATACTTACCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCTTGATAGCCGTGTGCCAGCTGACCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp TGGCTCCAAGATGCCAAGCCCATGCCACCCTGTTTCTaGGGTACTCTGGAGGGCCACTGCTTAAGGCTTGGC +
Preference number: 6 (lower is better)
Translates to: WLQDAKPMPPCF*GTLEGHCLRLG
Trigger: GCCAAGCCTTAAGCAGTGGCCCTCCAGAGTACCCCAGAAACAGGGTGGCATGGGCTTGGCATCTTGGAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp TCCCTACTGCCTGGGGCTCTGGGGGTAGATGCAAGTTaGCTCCAAGATGCCAAGCCCATGCCACCCTGTTTC +
Preference number: 6 (lower is better)
Translates to: SLLPGALGVDAS*LQDAKPMPPCF
Trigger: GAAACAGGGTGGCATGGGCTTGGCATCTTGGAGCCAACTTGCATCTACCCCCAGAGCCCCAGGCAGTAGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CAA 72 bp CGTGTCCTTAGCTGGGGAGAGCCCATATCAAGGTGCTaGCCTATAGTCAGCCGGTCCTTCGCACCCCTCAGG +
Preference number: 6 (lower is better)
Translates to: RVLSWGEPISRC*PIVSRSFAPLR
Trigger: CCTGAGGGGTGCGAAGGACCGGCTGACTATAGGCAAGCACCTTGATATGGGCTCTCCCCAGCTAAGGACACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CAA 90 bp CTGGGCCCAGAAAATGGCAGGGCAGTGGCCTCTGCTGGTGGGCAGTaGGGGGAGACATTAGTAGGTGATTTGAGGGTGCTTGCTGGAGAG +
Preference number: 6 (lower is better)
Translates to: LGPENGRAVASAGGQ*GETLVGDLRVLAGE
Trigger: CTCTCCAGCAAGCACCCTCAAATCACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGAGGCCACTGCCCTGCCATTTTCTGGGCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS TCA 72 bp TCCTTTCCTGGGAAGCTGCCCTTCAACATCTGGGTCTaGGAATGGCCACCGGTCCAACCTGTGTCAGCCGAG +
Preference number: 6 (lower is better)
Translates to: SFPGKLPFNIWV*EWPPVQPVSAE
Trigger: CTCGGCTGACACAGGTTGGACCGGTGGCCATTCTCAGACCCAGATGTTGAAGGGCAGCTTCCCAGGAAAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS CAA 72 bp CCTTCACATGGGTGCTCCATTGCCGCCATGGGCTTTTaGTCAGGGATAAGGGTGCAGCCAGCCAGCATGTCC +
Preference number: 6 (lower is better)
Translates to: PSHGCSIAAMGF*SGIRVQPASMS
Trigger: GGACATGCTGGCTGGCTGCACCCTTATCCCTGACAAAAAGCCCATGGCGGCAATGGAGCACCCATGTGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS TCA 72 bp TCCTTTCCTGGGAAGCTGCCCTTCAACATCTGGGTCTaGGAATGGCCACCGGTCCAACCTAGCTGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: SFPGKLPFNIWV*EWPPVQPSWQG
Trigger: TCCTTGCCAGCTAGGTTGGACCGGTGGCCATTCTCAGACCCAGATGTTGAAGGGCAGCTTCCCAGGAAAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS TCA 72 bp CAAGAACCAGGCAATATGCACTGCCAGCAGCAGCACTaGGACCCTGCCTGTCTGGGAAGCAAGATGACTCCC +
Preference number: 6 (lower is better)
Translates to: QEPGNMHCQQQH*DPACLGSKMTP
Trigger: GGGAGTCATCTTGCTTCCCAGACAGGCAGGGTCTCAGTGCTGCTGCTGGCAGTGCATATTGCCTGGTTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS CAA 90 bp GTGGCCTCTGCTGGTGGGCAGTTGGGGGAGACATTAGTAGGTGATTaGAGGGTGCTTGCTGGAGAGACAGAGAAGCTATCCAGGTCTACC +
Preference number: 6 (lower is better)
Translates to: VASAGGQLGETLVGD*RVLAGETEKLSRST
Trigger: GGTAGACCTGGATAGCTTCTCTGTCTCTCCAGCAAGCACCCTCAAATCACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGAGGCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS GCA 72 bp GTCCAGAGAGGCCAAGATAGAGTCATACAGGCGATCTaGGTGGCTCTCCAGCTCACCAGACTGCTTTGCGAT +
Preference number: 6 (lower is better)
Translates to: VQRGQDRVIQAI*VALQLTRLLCD
Trigger: ATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGACTCTATCTTGGCCTCTCTGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CAA 90 bp AGTCATACAGGCGATCTGCGTGGCTCTCCAGCTCACCAGACTGCTTaGCGATCCTCCCAAGGACATCCTCTAAAACTGGGGTGTTCTCCA +
Preference number: 6 (lower is better)
Translates to: SHTGDLRGSPAHQTA*RSSQGHPLKLGCSP
Trigger: TGGAGAACACCCCAGTTTTAGAGGATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCAGATCGCCTGTATGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CAA 90 bp GAAGCTGGCCCATCACTGTCTGACACTTCCAAGGGGCTCTGCCCTTaGATATCCCCAGTGGGCAGGGTAACCAAGGTAGAAATGGATCCT +
Preference number: 6 (lower is better)
Translates to: EAGPSLSDTSKGLCP*ISPVGRVTKVEMDP
Trigger: AGGATCCATTTCTACCTTGGTTACCCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCTTGGAAGTGTCAGACAGTGATGGGCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS TCA 72 bp CTCTGCTGGTGGGCAGTTGGGGGAGACATTAGTAGGTaGTTTGAGGGTGCTTGCTGGAGAGACAGAGAAGCT +
Preference number: 6 (lower is better)
Translates to: LCWWAVGGDISR*FEGACWRDREA
Trigger: AGCTTCTCTGTCTCTCCAGCAAGCACCCTCAAATCACCTACTAATGTCTCCCCCAACTGCCCACCAGCAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS GCA 72 bp TACAGGCGATCTGCGTGGCTCTCCAGCTCACCAGACTaGTTTGCGATCCTCCCAAGGACATCCTCTAAAACT +
Preference number: 6 (lower is better)
Translates to: YRRSAWLSSSPD*FAILPRTSSKT
Trigger: AGTTTTAGAGGATGTCCTTGGGAGGATCGCAAAGCAGTCTGGTGAGCTGGAGAGCCACGCAGATCGCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS GCA 72 bp GATGCCAGGTTAAACCCCTTCACATGGGTGCTCCATTaGCGCCATGGGCTTTTTGTCAGGGATAAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: DARLNPFTWVLH*RHGLFVRDKGA
Trigger: TGCACCCTTATCCCTGACAAAAAGCCCATGGCGGCAATGGAGCACCCATGTGAAGGGGTTTAACCTGGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260569.4
ENST00000377990.7
CDS CAA 72 bp CCATCACTGTCTGACACTTCCAAGGGGCTCTGCCCTTaGATATCCCCAGTGGGCAGGGTAACCAAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PSLSDTSKGLCP*ISPVGRVTKVE
Trigger: TTCTACCTTGGTTACCCTGCCCACTGGGGATATCAAAGGGCAGAGCCCCTTGGAAGTGTCAGACAGTGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377990.7
ENST00000537589.1
CDS CAA 90 bp GCCTCAGTGGGTAAGTATAGTCAAGCAGATCTTCATACTCTTTATTaGGGTTCCAGAGAGGGGAGTGGCGGTCGGGTGATGGAGGCAGGG +
Preference number: 6 (lower is better)
Translates to: ASVGKYSQADLHTLY*GSREGSGGRVMEAG
Trigger: CCCTGCCTCCATCACCCGACCGCCACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAAGATCTGCTTGACTATACTTACCCACTGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS TCA 72 bp GCAACATTATACAGCCAGCAGATCAGCTCTTCCAGCTaGCAGCAAAATGTCTGTCCCGACTCCACGACTCTG +
Preference number: 6 (lower is better)
Translates to: ATLYSQQISSSS*QQNVCPDSTTL
Trigger: CAGAGTCGTGGAGTCGGGACAGACATTTTGCTGTCAGCTGGAAGAGCTGATCTGCTGGCTGTATAATGTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS TCA 72 bp GAGCAAATAGTTGTTGTTCTGGGAAGGCTCAGAGTCTaGGGGAACTCCTCGGAGGAAGAAAGCTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: EQIVVVLGRLRV*GNSSEEESLVF
Trigger: GAAGACCAAGCTTTCTTCCTCCGAGGAGTTCCCTCAGACTCTGAGCCTTCCCAGAACAACAACTATTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000475851.1
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp ATCAAGGTGCTTTGGGAGCTGAGGCCCGGGCCTCAGTaGGTAAGTATAGTCAAGCAGATCTTCATACTCTTT +
Preference number: 6 (lower is better)
Translates to: IKVLWELRPGPQ*VSIVKQIFILF
Trigger: AAAGAGTATGAAGATCTGCTTGACTATACTTACCCACTGAGGCCCGGGCCTCAGCTCCCAAAGCACCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CCA 72 bp TCAGAGTCTGAGGGAACTCCTCGGAGGAAGAAAGCTTaGTCTTCTCCACCTGCAATGATCAAAGGGACAAAA +
Preference number: 6 (lower is better)
Translates to: SESEGTPRRKKA*SSPPAMIKGTK
Trigger: TTTTGTCCCTTTGATCATTGCAGGTGGAGAAGACCAAGCTTTCTTCCTCCGAGGAGTTCCCTCAGACTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS CAA 72 bp GGTAAGTATAGTCAAGCAGATCTTCATACTCTTTATTaGGGTTCCAGAGAGGGGAGTGGCGGTCGGGTGATG +
Preference number: 6 (lower is better)
Translates to: GKYSQADLHTLY*GSREGSGGRVM
Trigger: CATCACCCGACCGCCACTCCCCTCTCTGGAACCCAAATAAAGAGTATGAAGATCTGCTTGACTATACTTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260569.4
ENST00000377990.7
ENST00000497039.1
ENST00000537589.1
CDS CAA 90 bp GATTGGGGGAAGAGACAAGACACCTGTACACAAAGCTTCCTAACGTaGAGTGTCATTACCTTCACACATTGCACCAGTGATTCTTTTCCC +
Preference number: 6 (lower is better)
Translates to: DWGKRQDTCTQSFLT*SVITFTHCTSDSFP
Trigger: GGGAAAAGAATCACTGGTGCAATGTGTGAAGGTAATGACACTCAACGTTAGGAAGCTTTGTGTACAGGTGTCTTGTCTCTTCCCCCAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS GCA 72 bp CAGTATTTAGGAAAGACCTTAAAATGCAAAGTCTGCTaGCTGAGGCAAGAACCAGGCAATATGCACTGCCAG +
Preference number: 6 (lower is better)
Translates to: QYLGKTLKCKVC*LRQEPGNMHCQ
Trigger: CTGGCAGTGCATATTGCCTGGTTCTTGCCTCAGGCAGCAGACTTTGCATTTTAAGGTCTTTCCTAAATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS GCA 72 bp AGACAGTATTTAGGAAAGACCTTAAAATGCAAAGTCTaGTGCCTGAGGCAAGAACCAGGCAATATGCACTGC +
Preference number: 6 (lower is better)
Translates to: RQYLGKTLKCKV*CLRQEPGNMHC
Trigger: GCAGTGCATATTGCCTGGTTCTTGCCTCAGGCAGCAGACTTTGCATTTTAAGGTCTTTCCTAAATACTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS GCA 72 bp AGCTTCCTAACGTTGAGTGTCATTACCTTCACACATTaGACCAGTGATTCTTTTCCCTGTTCTCCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: SFLTLSVITFTH*TSDSFPCSPPF
Trigger: GAAAGGAGGAGAACAGGGAAAAGAATCACTGGTGCAATGTGTGAAGGTAATGACACTCAACGTTAGGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS CAA 72 bp CTTGGATCAGCACCATTACTAACTAGAATCAGCATCTaGGAGCCAGATACGTCCATGTTTCTCTTCACACAT +
Preference number: 6 (lower is better)
Translates to: LGSAPLLTRISI*EPDTSMFLFTH
Trigger: ATGTGTGAAGAGAAACATGGACGTATCTGGCTCCAAGATGCTGATTCTAGTTAGTAATGGTGCTGATCCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS CAA 72 bp AAGAGACAAGACACCTGTACACAAAGCTTCCTAACGTaGAGTGTCATTACCTTCACACATTGCACCAGTGAT +
Preference number: 6 (lower is better)
Translates to: KRQDTCTQSFLT*SVITFTHCTSD
Trigger: ATCACTGGTGCAATGTGTGAAGGTAATGACACTCAACGTTAGGAAGCTTTGTGTACAGGTGTCTTGTCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000537589.1
CDS CAA 90 bp AAACCAATTCTTGGATCAGCACCATTACTAACTAGAATCAGCATCTaGGAGCCAGATACGTCCATGTTTCTCTTCACACATTGCACCAGT +
Preference number: 6 (lower is better)
Translates to: KPILGSAPLLTRISI*EPDTSMFLFTHCTS
Trigger: ACTGGTGCAATGTGTGAAGAGAAACATGGACGTATCTGGCTCCAAGATGCTGATTCTAGTTAGTAATGGTGCTGATCCAAGAATTGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497039.1
CDS TCA 72 bp CACAATGCCTGGCACATAAAAAGTGCCTGGTCAACATaGACATGTTTTATTATGATGTTAGTGGATTGGGGG +
Preference number: 6 (lower is better)
Translates to: HNAWHIKSAWST*TCFIMMLVDWG
Trigger: CCCCCAATCCACTAACATCATAATAAAACATGTTCATGTTGACCAGGCACTTTTTATGTGCCAGGCATTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537589.1