RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP44 (Homo sapiens)

Ensembl gene IDs: ENSG00000164118

Ensembl transcript IDs: ENST00000296519.6, ENST00000396791.7, ENST00000426172.3, ENST00000457424.6, ENST00000503053.5, ENST00000503780.6, ENST00000505124.5, ENST00000508483.1, ENST00000514712.5, ENST00000515299.5

Found 256 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGGAGAGAGGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATaGCCACGGAGCAGCCAGCTGAGACTGGAACAAGAGGATGTAGCA +
Preference number: 1 (lower is better)
Translates to: QERGQAKLCDERYEV*PRSSQLRLEQEDVA
Trigger: TGCTACATCCTCTTGTTCCAGTCTCAGCTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCCTCTCTCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR TCA 90 bp CTGAGGAGGAAGCTGGTTTCCAGGCAGAATTCTGGACTTCGTGGATaGGCTTCACTGAAACATCAGAGTACAGCAGGAAAAGGTAAGCAC +
Preference number: 1 (lower is better)
Translates to: LRRKLVSRQNSGLRG*ASLKHQSTAGKGKH
Trigger: GTGCTTACCTTTTCCTGCTGTACTCTGATGTTTCAGTGAAGCTCATCCACGAAGTCCAGAATTCTGCCTGGAAACCAGCTTCCTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CCA 90 bp CACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTaGCCTTGCCCAGCTCTTTCCCTGCTACTTTCACTGTTGAGCTAT +
Preference number: 1 (lower is better)
Translates to: HRTFSLLYQRYKRWS*PCPALSLLLSLLSY
Trigger: ATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CCA 90 bp ATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATaGTCTTGGCCTTGCCCAGCTCTTTCCCTGCTACTTTCACTGTTG +
Preference number: 1 (lower is better)
Translates to: MEHRTFSLLYQRYKR*SWPCPALSLLLSLL
Trigger: CAACAGTGAAAGTAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR GCA 90 bp ACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTaGCCAGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTA +
Preference number: 1 (lower is better)
Translates to: TFSLLYQRYKRWSWP*PALSLLLSLLSYIL
Trigger: TAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR TCA 90 bp CCCCATGTATTGAGTAAGTATCTGAACCAGGTCAGTAAGTGGTTGTaGTTAATGCATGCTATGCCTGAGATCTCTGGCAGTTCAGATGTG +
Preference number: 1 (lower is better)
Translates to: PHVLSKYLNQVSKWL*LMHAMPEISGSSDV
Trigger: CACATCTGAACTGCCAGAGATCTCAGGCATAGCATGCATTAATCACAACCACTTACTGACCTGGTTCAGATACTTACTCAATACATGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR TCA 90 bp AATAGAATAAGTATAGAATGCTGCCAGTGTTGCATGGTCAGAGAATaGGCAAATGCTATCCCCATTATTTTCCCTTCTTTCCATTGCCAC +
Preference number: 1 (lower is better)
Translates to: NRISIECCQCCMVRE*ANAIPIIFPSFHCH
Trigger: GTGGCAATGGAAAGAAGGGAAAATAATGGGGATAGCATTTGCTCATTCTCTGACCATGCAACACTGGCAGCATTCTATACTTATTCTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR CCA 90 bp TCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGGATTTGTAACAGTTTACCTATGTGT +
Preference number: 1 (lower is better)
Translates to: SLLSYILTSTSLSHC*TLSPFWICNSLPMC
Trigger: ACACATAGGTAAACTGTTACAAATCCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CCA 90 bp TTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCATTCTaGATTTGTAACAGTTTACCTATGTGTGATCTTAATAGACATTGG +
Preference number: 1 (lower is better)
Translates to: LTSTSLSHCWTLSPF*ICNSLPMCDLNRHW
Trigger: CCAATGTCTATTAAGATCACACATAGGTAAACTGTTACAAATCCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CCA 90 bp TTCTGGATTTGTAACAGTTTACCTATGTGTGATCTTAATAGACATTaGGAAGAAAGGAAGAATGGTCTGCTTCAGCACTTCTGTAATCTT +
Preference number: 1 (lower is better)
Translates to: FWICNSLPMCDLNRH*EERKNGLLQHFCNL
Trigger: AAGATTACAGAAGTGCTGAAGCAGACCATTCTTCCTTTCTTCCCAATGTCTATTAAGATCACACATAGGTAAACTGTTACAAATCCAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAGACAGGCAGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPDRQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGTC...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR TCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAAATGCATGCTATGCCTaGGATCTCTGGCAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPNACYA*DLWQFR
Trigger: TCTGAACTGCCAGAGATCTCAGGCATAGCATGCATT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCATCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGG +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPSLSHC*TLSPFW
Trigger: CCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGA...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAGCTGCCAGTGTTGCATaGTCAGAGAATGAGCAAATG +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPAASVA*SENEQM
Trigger: CATTTGCTCATTCTCTGACCATGCAACACTGGCAGC...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAGTGGGCTCAACATCCTaGTGGATTGTTTCTATTAGA +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPVGSTS*WIVSIR
Trigger: TCTAATAGAAACAATCCACCAGGATGTTGAGCCCAC...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAAGAATAAGTATAGAATaGTGCCAGTGTTGCATGGTC +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPRISIE*CQCCMV
Trigger: GACCATGCAACACTGGCAGCATTCTATACTTATTCT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGTCTCATGGTGAACCTTaGGACCATAGTCCTCTTGGT +
Preference number: 2 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWSHGEP*DHSPLG
Trigger: ACCAAGAGGACTATGGTCTCAAGGTTCACCATGAGA...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR GCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCATCATCAGTTTTGATATaGCCATTAAAAGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPSSVLI*PLKELE
Trigger: CTCCAGCTCTTTTAATGGGCATATCAAAACTGATGA...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAATTCATCAGTACAGATaGCAAGATGGTATATATGAG +
Preference number: 2 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPIHQYR*QDGIYE
Trigger: CTCATATATACCATCTTGGCATCTGTACTGATGAAT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR GCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACAGATGGTCTTGGCCTTaGCCAGCTCTTTCCCTGCTA +
Preference number: 2 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNRWSWP*PALSLL
Trigger: TAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCT...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACCCCCAAAATACACTaGTTGAGCCAGAGTTTATGG +
Preference number: 2 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWTPKIH*LSQSLW
Trigger: CCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGT...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR CAA 90 bp GATGGTATATATGAGAGCCTCCTGGGTATAATACACAAGTCCCATTaGGAATGTTTCCAACAGGATGTAAACCATAGTCCTCAAGCCTGT +
Preference number: 2 (lower is better)
Translates to: DGIYESLLGIIHKSH*ECFQQDVNHSPQAC
Trigger: ACAGGCTTGAGGACTATGGTTTACATCCTGTTGGAAACATTCCAAATGGGACTTGTGTATTATACCCAGGAGGCTCTCATATATACCATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000503780.6
3UTR-3UTR TCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCACCAAGATGGTATATATaGGAGCCTCCTGGGTATAAT +
Preference number: 2 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPPRWYI*EPPGYN
Trigger: ATTATACCCAGGAGGCTCTCATATATACCATCTTGG...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR TCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGAGTGGATGAGCTTCACTaGAACATCAGAGTACAGCAG +
Preference number: 2 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRVDELH*NIRVQQ
Trigger: CTGCTGTACTCTGATGTTTCAGTGAAGCTCATCCAC...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGCATGAAAAATATGAGTaGGGGGCTATCAGCAGACAT +
Preference number: 2 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWHEKYE*GAISRH
Trigger: ATGTCTGCTGATAGCCCCTCACTCATATTTTTCATG...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATAATGCATGCTATGCCTaGGATCTCTGGCAGTTCAGA +
Preference number: 2 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDNACYA*DLWQFR
Trigger: TCTGAACTGCCAGAGATCTCAGGCATAGCATGCATT...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGG +
Preference number: 2 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRSLSHC*TLSPFW
Trigger: CCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGA...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTATAAGTATAGAATGCTaGCAGTGTTGCATGGTCAGA +
Preference number: 2 (lower is better)
Translates to: SSFPATFTVELYLNLYFPISIEC*QCCMVR
Trigger: TCTGACCATGCAACACTGGCAGCATTCTATACTTAT...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGATAAGTATAGAATGCTaGCAGTGTTGCATGGTCAGA +
Preference number: 2 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWISIEC*QCCMVR
Trigger: TCTGACCATGCAACACTGGCAGCATTCTATACTTAT...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACTGCATGGTCAGAGAATaGGCAAATGCTATCCCCATT +
Preference number: 2 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNCMVRE*ANAIPI
Trigger: AATGGGGATAGCATTTGCTCATTCTCTGACCATGCA...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTTCATCAGTTTTGATATaGCCATTAAAAGAGCTGGAG +
Preference number: 2 (lower is better)
Translates to: SSFPATFTVELYLNLYFPSSVLI*PLKELE
Trigger: CTCCAGCTCTTTTAATGGGCATATCAAAACTGATGA...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR GCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCAAGAATAAGTATAGAATaGTGCCAGTGTTGCATGGTC +
Preference number: 2 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPRISIE*CQCCMV
Trigger: GACCATGCAACACTGGCAGCATTCTATACTTATTCT...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTATGCATGGTCAGAGAATaGGCAAATGCTATCCCCATT +
Preference number: 2 (lower is better)
Translates to: SKPMLEQFILLRSLINHLCMVRE*ANAIPI
Trigger: AATGGGGATAGCATTTGCTCATTCTCTGACCATGCA...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR TCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGACCAAAATACACTGCTTaGGCCAGAGTTTATGGATAT +
Preference number: 2 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRPKYTA*ARVYGY
Trigger: ATATCCATAAACTCTGGCTCAAGCAGTGTATTTTGG...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATACACAAGTCCCATTTaGAATGTTTCCAACAGGATG +
Preference number: 2 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRYTSPI*NVSNRM
Trigger: CATCCTGTTGGAAACATTCCAAATGGGACTTGTGTA...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR GCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACAAAGGAAGAATGGTCTaGTTCAGCACTTCTGTAATC +
Preference number: 2 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNKGRMV*FSTSVI
Trigger: GATTACAGAAGTGCTGAAGCAGACCATTCTTCCTTT...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACAAGGCCTATTACATATaGCCTATGGAAATGTGTTTT +
Preference number: 2 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNKAYYI*PMEMCF
Trigger: AAAACACATTTCCATAGGCCATATGTAATAGGCCTT...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR GCA 72 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATaGCCACGGAGCAGCCAGCTGAGACTGGAACAAGAG +
Preference number: 3 (lower is better)
Translates to: GQAKLCDERYEV*PRSSQLRLEQE
Trigger: CTCTTGTTCCAGTCTCAGCTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR CAA 90 bp CAGCTGAGACTGGAACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATGGAAGGCACAAGAATCACTaGAACCCGGTAGGCAGAGGT +
Preference number: 3 (lower is better)
Translates to: QLRLEQEDVALHAGKFHGRHKNH*NPVGRG
Trigger: ACCTCTGCCTACCGGGTTCAAGTGATTCTTGTGCCT...TCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGTTCCAGTCTCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR CCA 72 bp ATACTAAAAATGTGGCCAAGCATGGTGACTCACCCATaGAATCTAGCACTTTGGGACATCCAGGTGGGCGAG +
Preference number: 3 (lower is better)
Translates to: ILKMWPSMVTHP*NLALWDIQVGE
Trigger: CTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGGTGAGTCACCATGCTTGGCCACATTTTTAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000296519.6
ENST00000503780.6
3UTR CCA 72 bp ACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATaGAATCTAGCACTTTGGGACATCCAGGTGGGCGAG +
Preference number: 3 (lower is better)
Translates to: TRGCSTPCRKIP*NLALWDIQVGE
Trigger: CTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR CAA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGATACACAAGTCCCATTaGGAATGTTTCCAACAGGAT +
Preference number: 3 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQIHKSH*ECFQQD
Trigger: ATCCTGTTGGAAACATTCCAAATGGGACTTGTGTAT...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR-3UTR CAA 90 bp GCTATGCCTGAGATCTCTGGCAGTTCAGATGTGAAGCCCATAAAATATCTGACAAGAATGCTGCCAGTGTaGCATGGTCAGAGAATGAGC +
Preference number: 3 (lower is better)
Translates to: AMPEISGSSDVKPIKYLTRMLPV*HGQRMS
Trigger: GCTCATTCTCTGACCATGCAACACTGGCAGCATTCT...TGTCAGATATTTTATGGGCTTCACATCTGAACTGCCAGAGATCTCAGGCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR TCA 72 bp CCAGGCAGAATTCTGGACTTCGTGGATGAGCTTCACTaGAACATCAGAGTACAGCAGGAAAAGGTAAGCACA +
Preference number: 3 (lower is better)
Translates to: PGRILDFVDELH*NIRVQQEKVST
Trigger: TGTGCTTACCTTTTCCTGCTGTACTCTGATGTTTCAGTGAAGCTCATCCACGAAGTCCAGAATTCTGCCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACAAGATGGTCTTGGCCTaGCCCAGCTCTTTCCCTGCT +
Preference number: 3 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNKMVLA*PSSFPA
Trigger: AGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTT...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGACCTCTTGGTCTAAACTaGAGGACCATAGTCCTCCAG +
Preference number: 3 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRPLGLN*RTIVLQ
Trigger: CTGGAGGACTATGGTCCTCAAGTTTAGACCAAGAGG...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR TCA 72 bp TTGAGTAAGTATCTGAACCAGGTCAGTAAGTGGTTGTaGTTAATGCATGCTATGCCTGAGATCTCTGGCAGT +
Preference number: 3 (lower is better)
Translates to: LSKYLNQVSKWL*LMHAMPEISGS
Trigger: ACTGCCAGAGATCTCAGGCATAGCATGCATTAATCACAACCACTTACTGACCTGGTTCAGATACTTACTCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGTACAAAAGATGGTCTaGGCCTTGCCCAGCTCTTTC +
Preference number: 3 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNVQKMV*ALPSSF
Trigger: GAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTAC...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TTTAAGGAGCCAATAAATGCAATGAATAAAGCCAAGGCCTATTACATATGGCCTAGAATGCTGCCAGTGTaGCATGGTCAGAGAATGAGC +
Preference number: 3 (lower is better)
Translates to: FKEPINAMNKAKAYYIWPRMLPV*HGQRMS
Trigger: GCTCATTCTCTGACCATGCAACACTGGCAGCATTCT...AGGCCATATGTAATAGGCCTTGGCTTTATTCATTGCATTTATTGGCTCCTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACTTCCCTCAGCCATTGTaGGACTCTTTCACCATTCTG +
Preference number: 3 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNFPQPL*DSFTIL
Trigger: CAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGAA...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR TCA 72 bp AAATCCAGCTGTGGAAAGGTATGCATACTAGATAAATaGCTATTGGGCCTTTGCCAGACCACAAAATTGAAT +
Preference number: 3 (lower is better)
Translates to: KSSCGKVCILDK*LLGLCQTTKLN
Trigger: ATTCAATTTTGTGGTCTGGCAAAGGCCCAATAGTCATTTATCTAGTATGCATACCTTTCCACAGCTGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR CCA 72 bp ACTTCCCTCAGCCATTGTTGGACTCTTTCACCATTCTaGATTTGTAACAGTTTACCTATGTGTGATCTTAAT +
Preference number: 3 (lower is better)
Translates to: TSLSHCWTLSPF*ICNSLPMCDLN
Trigger: ATTAAGATCACACATAGGTAAACTGTTACAAATCCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CCA 72 bp AGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGGATTTGTAACAGTTTA +
Preference number: 3 (lower is better)
Translates to: SYILTSTSLSHC*TLSPFWICNSL
Trigger: TAAACTGTTACAAATCCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACCTGCTACTTTCACTGTaGAGCTATATCTTAACCTCT +
Preference number: 3 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNLLLSL*SYILTS
Trigger: AGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAG...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACCAACATCCTGGTGGATaGTTTCTATTAGAAAATGTG +
Preference number: 3 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNQHPGG*FLLENV
Trigger: CACATTTTCTAATAGAAACAATCCACCAGGATGTTG...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR-3UTR CAA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTACAACATCCTGGTGGATaGTTTCTATTAGAAAATGTG +
Preference number: 3 (lower is better)
Translates to: SKPMLEQFILLRSLINHLQHPGG*FLLENV
Trigger: CACATTTTCTAATAGAAACAATCCACCAGGATGTTG...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp GAGAGAGGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCCTACAGCCAGGCGCCTaGGCCCAGAAGCGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: ERGQAKLCDERYEVCPRSLQPGA*AQKRFS
Trigger: CGAGAAGCGCTTCTGGGCGCAGGCGCCTGGCTGTAG...GCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCCTCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGAGATGGTCTTGGCCTTaGCCAGCTCTTTCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQRWSWP*PALSLL
Trigger: TAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCT...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp CAGCTGAGACTGGAACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATGGACACGGAGCAGCCAGCTaGGACTGGAACAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QLRLEQEDVALHAGKFHGHGAAS*DWNKRM
Trigger: CATCCTCTTGTTCCAGTCTCAGCTGGCTGCTCCGTG...TCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGTTCCAGTCTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp TCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGCGAGTAGCTTTAGCTCACGGGCAAAGATGCTGCTaGGTCTCCCTTTATCAAACC +
Preference number: 4 (lower is better)
Translates to: SMESSTLGHPGGRVALAHGQRCC*VSLYQT
Trigger: GGTTTGATAAAGGGAGACCCAGCAGCATCTTTGCCC...GTGAGCTAAAGCTACTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp GAGAGAGGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCGTGGATGAGCTTCACTaGAACATCAGAGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: ERGQAKLCDERYEVCPRSVDELH*NIRVQQ
Trigger: CTGCTGTACTCTGATGTTTCAGTGAAGCTCATCCAC...GCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCCTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp GAGAGAGGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCGATGATGGGCAAAGATaGTGCTGGGTCTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: ERGQAKLCDERYEVCPRSDDGQR*CWVSLY
Trigger: ATAAAGGGAGACCCAGCAGCATCTTTGCCCATCATC...GCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCCTCTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTGGAATTGTGGGTTCCTaGCCGCCACGCACCACCGCA +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGGIVGS*PPRTTA
Trigger: TGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCC...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCACAACGGTACAAAAGATaGTCTTGGCCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPQRYKR*SWPCPA
Trigger: AGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTG...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CAA 72 bp CACTCCATGCAGGAAAATTCCATGGAATCTAGCACTTaGGGACATCCAGGTGGGCGAGTAGCTTTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: HSMQENSMESST*GHPGGRVALAH
Trigger: GTGAGCTAAAGCTACTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
3UTR CAA 72 bp CCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTaGCCCAGCTCTTTCCCTGCTACTTTCACTGTTGAG +
Preference number: 4 (lower is better)
Translates to: PTVPTVQKMVLA*PSSFPATFTVE
Trigger: CTCAACAGTGAAAGTAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGCGAGTAGCTTTAGCTCACAGCTTTCTTCTTTCCTaGGGTCATAAACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SMESSTLGHPGGRVALAHSFLLS*GHKPAT
Trigger: AGTGGCAGGTTTATGACCTCAGGAAAGAAGAAAGCT...GTGAGCTAAAGCTACTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGCCAAGATGGTATATATaGGAGCCTCCTGGGTATAAT +
Preference number: 4 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQPRWYI*EPPGYN
Trigger: ATTATACCCAGGAGGCTCTCATATATACCATCTTGG...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp CACTCCATGCAGGAAAATTCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGTCTCATGGTGAACCTTaGGACCATAGTCCTCTTGGT +
Preference number: 4 (lower is better)
Translates to: HSMQENSMESSTLGHPGGSHGEP*DHSPLG
Trigger: ACCAAGAGGACTATGGTCTCAAGGTTCACCATGAGA...CCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp ACTCTTAAAATGTGGGCTCAACATCCTGGTGGATTGTTTCTATTAGAAAATGTGCTACAGCCAGGCGCCTaGGCCCAGAAGCGCTTCTCG +
Preference number: 4 (lower is better)
Translates to: TLKMWAQHPGGLFLLENVLQPGA*AQKRFS
Trigger: CGAGAAGCGCTTCTGGGCGCAGGCGCCTGGCTGTAG...CACATTTTCTAATAGAAACAATCCACCAGGATGTTGAGCCCACATTTTAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR TCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAACTTCGCTTTTTCTGTaGGGATTCAGAAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPTSLFL*GFRRSM
Trigger: CATGGACCTTCTGAATCCTCACAGAAAAAGCGAAGT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCACACGGAGCAGCCAGCTaGGACTGGAACAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPHGAAS*DWNKRM
Trigger: CATCCTCTTGTTCCAGTCTCAGCTGGCTGCTCCGTG...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCATGCATGGTCAGAGAATaGGCAAATGCTATCCCCATT +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPCMVRE*ANAIPI
Trigger: AATGGGGATAGCATTTGCTCATTCTCTGACCATGCA...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGCAGATATTTTCTCATTaGCCAAAGGAGGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQQIFSH*PKEVLT
Trigger: AGTCAGAACCTCCTTTGGGCAATGAGAAAATATCTG...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp ACTCTTAAAATGTGGGCTCAACATCCTGGTGGATTGTTTCTATTAGAAAATGTGGGAATTGTGGGTTCCTaGCCGCCACGCACCACCGCA +
Preference number: 4 (lower is better)
Translates to: TLKMWAQHPGGLFLLENVGIVGS*PPRTTA
Trigger: TGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCC...CACATTTTCTAATAGAAACAATCCACCAGGATGTTGAGCCCACATTTTAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR GCA 90 bp GAGAGAGGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCGGATGTAGCACTCCATaGAGGAAAATTCCATGGAAT +
Preference number: 4 (lower is better)
Translates to: ERGQAKLCDERYEVCPRSGCSTP*RKIPWN
Trigger: ATTCCATGGAATTTTCCTGCATGGAGTGCTACATCC...GCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCCTCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCACAGAGGAATACTTGCTaGCCTCTCTACTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPQRNTC*PLYFAF
Trigger: AAAAGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTG...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGCGAGTAGCTTTAGCTCACTGCAGGAAAATTCCATaGAATCTAGCACTTTGGGAC +
Preference number: 4 (lower is better)
Translates to: SMESSTLGHPGGRVALAHCRKIP*NLALWD
Trigger: GTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCA...GTGAGCTAAAGCTACTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAGGAAGAAAGGAAGAATaGTCTGCTTCAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPGRKEE*SASALL
Trigger: CAGAAGTGCTGAAGCAGACCATTCTTCCTTTCTTCC...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CAGCTGAGACTGGAACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATGGATACAAAAGATGGTCTTaGCCTTGCCCAGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: QLRLEQEDVALHAGKFHGYKRWS*PCPALS
Trigger: GGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTA...TCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGTTCCAGTCTCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGCTGACTTACCAGAACTaGTTTTCTTTCTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQLTYQN*FSFFVV
Trigger: CACAACAAAGAAAGAAAATCAGTTCTGGTAAGTCAG...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATCACGGAGCAGCCAGCTaGGACTGGAACAAGAGGATG +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDHGAAS*DWNKRM
Trigger: CATCCTCTTGTTCCAGTCTCAGCTGGCTGCTCCGTG...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCACATGAAAAATATGAGTaGGGGGCTATCAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPHEKYE*GAISRH
Trigger: ATGTCTGCTGATAGCCCCTCACTCATATTTTTCATG...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp GCTATGCCTGAGATCTCTGGCAGTTCAGATGTGAAGCCCATAAAATATCTGACAGGACAGAGGAATACTTaGTGGCCTCTCTACTTCGCT +
Preference number: 4 (lower is better)
Translates to: AMPEISGSSDVKPIKYLTGQRNT*WPLYFA
Trigger: AGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCC...TGTCAGATATTTTATGGGCTTCACATCTGAACTGCCAGAGATCTCAGGCATAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCCAAGATCGTGCTATTaGACTCCAGCCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPPRSCY*TPAWAT
Trigger: TGTTGCCCAGGCTGGAGTGCAATAGCACGATCTTGG...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGACCGAGATCACGCCAGTaGACTCCAGCCTGGGCAATA +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRPRSRQ*TPAWAI
Trigger: TATTGCCCAGGCTGGAGTGCACTGGCGTGATCTCGG...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp CAGCTGAGACTGGAACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATGGAGGAAGAAAGGAAGAATaGTCTGCTTCAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: QLRLEQEDVALHAGKFHGGRKEE*SASALL
Trigger: CAGAAGTGCTGAAGCAGACCATTCTTCCTTTCTTCC...TCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGTTCCAGTCTCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGTTGCTGTATTTAATATaGAACACCGTACCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQLLYLI*NTVPLA
Trigger: GGCTAAAGGTACGGTGTTCCATATTAAATACAGCAA...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp CACTCCATGCAGGAAAATTCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGTCTTCATTATACAAGTaGCGAATCACCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: HSMQENSMESSTLGHPGGSSLYK*RITTAF
Trigger: GAAAGCTGTGGTGATTCGTCACTTGTATAATGAAGA...CCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR TCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGAGACAGGCAGATCACCTaGGGTCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRDRQIT*GQEFET
Trigger: GGTCTCAAACTCCTGACCTCAGGTGATCTGCCTGTC...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAACATTTACATCCTGTTaGTCAGCCTTGATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPTFTSC*SALISG
Trigger: TCCTGAAATCAAGGCTGAGCAACAGGATGTAAATGT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACTCGGTAGGCAGAAGGTaGAGTGAGCCGAGATCACGC +
Preference number: 4 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNSVGRR*SEPRSR
Trigger: GCGTGATCTCGGCTCACTGCACCTTCTGCCTACCGA...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp GCTATGCCTGAGATCTCTGGCAGTTCAGATGTGAAGCCCATAAAATATCTGACATACAAAAGATGGTCTTaGCCTTGCCCAGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: AMPEISGSSDVKPIKYLTYKRWS*PCPALS
Trigger: GGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTA...TGTCAGATATTTTATGGGCTTCACATCTGAACTGCCAGAGATCTCAGGCATAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCACAACGGTACAAAAGATaGTCTTGGCCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPQRYKR*SWPCPA
Trigger: AGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTG...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAGTGGATGAGCTTCACTaGAACATCAGAGTACAGCAG +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPVDELH*NIRVQQ
Trigger: CTGCTGTACTCTGATGTTTCAGTGAAGCTCATCCAC...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGAATGCATGCTATGCCTaGGATCTCTGGCAGTTCAGA +
Preference number: 4 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWNACYA*DLWQFR
Trigger: TCTGAACTGCCAGAGATCTCAGGCATAGCATGCATT...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGGATGGGCAAAGATGCTaGTGGGTCTCCCTTTATCAA +
Preference number: 4 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWDGQRC*WVSLYQ
Trigger: TTGATAAAGGGAGACCCAGCAGCATCTTTGCCCATC...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTGATGGGCAAAGATGCTaGTGGGTCTCCCTTTATCAA +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPDGQRC*WVSLYQ
Trigger: TTGATAAAGGGAGACCCAGCAGCATCTTTGCCCATC...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCAGGACAGAGGAATACTTaGTGGCCTCTCTACTTCGCT +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPGQRNT*WPLYFA
Trigger: AGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCC...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATAGATGGTCTTGGCCTTaGCCAGCTCTTTCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDRWSWP*PALSLL
Trigger: TAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCT...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCAGGGCAAAGATGCTGCTaGGTCTCCCTTTATCAAACC +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPGQRCC*VSLYQT
Trigger: GGTTTGATAAAGGGAGACCCAGCAGCATCTTTGCCC...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCACCGACCGTTTGTATTTaGAATTGTGGGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPPTVCI*NCGFLP
Trigger: GGGCAGGAACCCACAATTCCAAATACAAACGGTCGG...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR CCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTTTCCAGGCAGAATTCTaGACTTCGTGGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPFQAEF*TSWMSF
Trigger: GAAGCTCATCCACGAAGTCCAGAATTCTGCCTGGAA...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTTCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGG +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPSLSHC*TLSPFW
Trigger: CCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGA...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGTCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGG +
Preference number: 4 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWSLSHC*TLSPFW
Trigger: CCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGA...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGTACAAAAGATGGTCTTaGCCTTGCCCAGCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWYKRWS*PCPALS
Trigger: GGAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTA...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCATTGCTGTATTTAATATaGAACACCGTACCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPLLYLI*NTVPLA
Trigger: GGCTAAAGGTACGGTGTTCCATATTAAATACAGCAA...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
3UTR CAA 72 bp GTTACCCATGTAGCAGGAAGGAAAAAGTCATCAGTTTaGATATGCCCATTAAAAGAGCTGGAGCTGAGGAGG +
Preference number: 4 (lower is better)
Translates to: VTHVAGRKKSSV*ICPLKELELRR
Trigger: CCTCCTCAGCTCCAGCTCTTTTAATGGGCATATCAAAACTGATGACTTTTTCCTTCCTGCTACATGGGTAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp GGAATGTCTCCACGTTTTCTAGCCCTCAAACCCAGGAAGGTTAACAGGTTCAAATGTGATGGAATCTTCTaGAGACTGCTTAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: GMSPRFLALKPRKVNRFKCDGIF*RLLNSL
Trigger: CAAGGAATTAAGCAGTCTTCAGAAGATTCCATCACA...TTTGAACCTGTTAACCTTCCTGGGTTTGAGGGCTAGAAAACGTGGAGACATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTGCCCAAAGGAGGTTCTaGCTTACCAGAACTGATTTT +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPAQRRF*LTRTDF
Trigger: AAAATCAGTTCTGGTAAGTCAGAACCTCCTTTGGGC...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTAGCTTTCTTCTTTCCTaGGGTCATAAACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPSFLLS*GHKPAT
Trigger: AGTGGCAGGTTTATGACCTCAGGAAAGAAGAAAGCT...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAACTTCGCTTTTTCTGTaGGGATTCAGAAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPTSLFL*GFRRSM
Trigger: CATGGACCTTCTGAATCCTCACAGAAAAAGCGAAGT...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCAGATGATGGGCAAAGATaGTGCTGGGTCTCCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPDDGQR*CWVSLY
Trigger: ATAAAGGGAGACCCAGCAGCATCTTTGCCCATCATC...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp GGAATGTCTCCACGTTTTCTAGCCCTCAAACCCAGGAAGGTTAACAGGTTCAAACAGATATTTTCTCATTaGCCAAAGGAGGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: GMSPRFLALKPRKVNRFKQIFSH*PKEVLT
Trigger: AGTCAGAACCTCCTTTGGGCAATGAGAAAATATCTG...TTTGAACCTGTTAACCTTCCTGGGTTTGAGGGCTAGAAAACGTGGAGACATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CACTCCATGCAGGAAAATTCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGATTCATCAGTACAGATaGCAAGATGGTATATATGAG +
Preference number: 4 (lower is better)
Translates to: HSMQENSMESSTLGHPGGIHQYR*QDGIYE
Trigger: CTCATATATACCATCTTGGCATCTGTACTGATGAAT...CCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR GCA 90 bp CAGCTGAGACTGGAACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATGGATCATCAGTTTTGATATaGCCATTAAAAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QLRLEQEDVALHAGKFHGSSVLI*PLKELE
Trigger: CTCCAGCTCTTTTAATGGGCATATCAAAACTGATGA...TCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGTTCCAGTCTCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CCA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGGGGCAAAGATGCTGCTaGGTCTCCCTTTATCAAACC +
Preference number: 4 (lower is better)
Translates to: SIATVYVINREIEVLGIRGQRCC*VSLYQT
Trigger: GGTTTGATAAAGGGAGACCCAGCAGCATCTTTGCCC...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGCAGAGGAATACTTGCTaGCCTCTCTACTTCGCTTTT +
Preference number: 4 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWQRNTC*PLYFAF
Trigger: AAAAGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTG...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGACCGACCGTTTGTATTTaGAATTGTGGGTTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRPTVCI*NCGFLP
Trigger: GGGCAGGAACCCACAATTCCAAATACAAACGGTCGG...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS-3UTR CCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTTTCCAGGCAGAATTCTaGACTTCGTGGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGFQAEF*TSWMSF
Trigger: GAAGCTCATCCACGAAGTCCAGAATTCTGCCTGGAA...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAACTCTTTCACCATTCTaGATTTGTAACAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPTLSPF*ICNSLP
Trigger: AGGTAAACTGTTACAAATCCAGAATGGTGAAAGAGT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTGCTGCCAGTGTTGCATaGTCAGAGAATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGAASVA*SENEQM
Trigger: CATTTGCTCATTCTCTGACCATGCAACACTGGCAGC...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTACTTCGCTTTTTCTGTaGGGATTCAGAAGGTCCATG +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGTSLFL*GFRRSM
Trigger: CATGGACCTTCTGAATCCTCACAGAAAAAGCGAAGT...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAGTCAGTAAGTGGTTGTaGTTAATGCATGCTATGCCT +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPVSKWL*LMHAMP
Trigger: AGGCATAGCATGCATTAATCACAACCACTTACTGAC...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCATGCATACTAGATAAATaGCTATTGGGCCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPCILDK*LLGLCQ
Trigger: CTGGCAAAGGCCCAATAGTCATTTATCTAGTATGCA...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATGATGGGCAAAGATGCTaGTGGGTCTCCCTTTATCAA +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDDGQRC*WVSLYQ
Trigger: TTGATAAAGGGAGACCCAGCAGCATCTTTGCCCATC...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGACAGAGGAATACTTaGTGGCCTCTCTACTTCGCT +
Preference number: 4 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNGQRNT*WPLYFA
Trigger: AGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCC...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCACCAGCCAATCCCATCTaGCTAATATTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPPANPI*LIFRRK
Trigger: TTTCCTCCTAAATATTAGGCAGATGGGATTGGCTGG...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS-3UTR GCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAAGATGGTCTTGGCCTTaGCCAGCTCTTTCCCTGCTA +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLRWSWP*PALSLL
Trigger: TAGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCT...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCAGGAAGAAAGGAAGAATaGTCTGCTTCAGCACTTCTG +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPGRKEE*SASALL
Trigger: CAGAAGTGCTGAAGCAGACCATTCTTCCTTTCTTCC...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACCAACGGTACAAAAGATaGTCTTGGCCTTGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNQRYKR*SWPCPA
Trigger: AGCTGGGCAAGGCCAAGACCATCTTTTGTACCGTTG...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp GGAATGTCTCCACGTTTTCTAGCCCTCAAACCCAGGAAGGTTAACAGGTTCAAATTGCTGTATTTAATATaGAACACCGTACCTTTAGCC +
Preference number: 4 (lower is better)
Translates to: GMSPRFLALKPRKVNRFKLLYLI*NTVPLA
Trigger: GGCTAAAGGTACGGTGTTCCATATTAAATACAGCAA...TTTGAACCTGTTAACCTTCCTGGGTTTGAGGGCTAGAAAACGTGGAGACATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGGCTGCCAGTGTTGCATaGTCAGAGAATGAGCAAATG +
Preference number: 4 (lower is better)
Translates to: SIATVYVINREIEVLGIRAASVA*SENEQM
Trigger: CATTTGCTCATTCTCTGACCATGCAACACTGGCAGC...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
3UTR CAA 72 bp TATGAGAGCCTCCTGGGTATAATACACAAGTCCCATTaGGAATGTTTCCAACAGGATGTAAACCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: YESLLGIIHKSH*ECFQQDVNHSP
Trigger: AGGACTATGGTTTACATCCTGTTGGAAACATTCCAAATGGGACTTGTGTATTATACCCAGGAGGCTCTCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000503780.6
CDS-3UTR TCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGAGCCCAAAGGAGGTTCTaGCTTACCAGAACTGATTTT +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRAQRRF*LTRTDF
Trigger: AAAATCAGTTCTGGTAAGTCAGAACCTCCTTTGGGC...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATAGCTTTCTTCTTTCCTaGGGTCATAAACCTGCCACT +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDSFLLS*GHKPAT
Trigger: AGTGGCAGGTTTATGACCTCAGGAAAGAAGAAAGCT...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCACATGAAAAATATGAGTaGGGGGCTATCAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPHEKYE*GAISRH
Trigger: ATGTCTGCTGATAGCCCCTCACTCATATTTTTCATG...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCCAAAATACACTGCTTaGGCCAGAGTTTATGGATAT +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPPKYTA*ARVYGY
Trigger: ATATCCATAAACTCTGGCTCAAGCAGTGTATTTTGG...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAACATTTACATCCTGTTaGTCAGCCTTGATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPTFTSC*SALISG
Trigger: TCCTGAAATCAAGGCTGAGCAACAGGATGTAAATGT...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATACCCCCAAAATACACTaGTTGAGCCAGAGTTTATGG +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDTPKIH*LSQSLW
Trigger: CCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGT...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp GGAATGTCTCCACGTTTTCTAGCCCTCAAACCCAGGAAGGTTAACAGGTTCAAAACTCTTTCACCATTCTaGATTTGTAACAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: GMSPRFLALKPRKVNRFKTLSPF*ICNSLP
Trigger: AGGTAAACTGTTACAAATCCAGAATGGTGAAAGAGT...TTTGAACCTGTTAACCTTCCTGGGTTTGAGGGCTAGAAAACGTGGAGACATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACTCCCTCAGCCATTGTTaGACTCTTTCACCATTCTGG +
Preference number: 4 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNSLSHC*TLSPFW
Trigger: CCAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGA...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTGTGGGCTCAACATCCTaGTGGATTGTTTCTATTAGA +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGVGSTS*WIVSIR
Trigger: TCTAATAGAAACAATCCACCAGGATGTTGAGCCCAC...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCATCTTCATTATACAAGTaGCGAATCACCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPSSLYK*RITTAF
Trigger: GAAAGCTGTGGTGATTCGTCACTTGTATAATGAAGA...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGTGCAGGAAAATTCTCTaGAATCTCATTCAAACCACA +
Preference number: 4 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWCRKIL*NLIQTT
Trigger: TGTGGTTTGAATGAGATTTCAGAGAATTTTCCTGCA...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp ACTCTTAAAATGTGGGCTCAACATCCTGGTGGATTGTTTCTATTAGAAAATGTGTGCATGGTCAGAGAATaGGCAAATGCTATCCCCATT +
Preference number: 4 (lower is better)
Translates to: TLKMWAQHPGGLFLLENVCMVRE*ANAIPI
Trigger: AATGGGGATAGCATTTGCTCATTCTCTGACCATGCA...CACATTTTCTAATAGAAACAATCCACCAGGATGTTGAGCCCACATTTTAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGGTCAGTAAGTGGTTGTaGTTAATGCATGCTATGCCT +
Preference number: 4 (lower is better)
Translates to: SIATVYVINREIEVLGIRVSKWL*LMHAMP
Trigger: AGGCATAGCATGCATTAATCACAACCACTTACTGAC...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCCAAAATACACTGCTTaGGCCAGAGTTTATGGATAT +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGPKYTA*ARVYGY
Trigger: ATATCCATAAACTCTGGCTCAAGCAGTGTATTTTGG...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTAAAGGAAGAATGGTCTaGTTCAGCACTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGKGRMV*FSTSVI
Trigger: GATTACAGAAGTGCTGAAGCAGACCATTCTTCCTTT...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCAAAAGGAAGAATGGTCTaGTTCAGCACTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPKGRMV*FSTSVI
Trigger: GATTACAGAAGTGCTGAAGCAGACCATTCTTCCTTT...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTATTCCAGGCAGAATTCTaGACTTCGTGGATGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLFQAEF*TSWMSF
Trigger: GAAGCTCATCCACGAAGTCCAGAATTCTGCCTGGAA...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATGTGGGCTCAACATCCTaGTGGATTGTTTCTATTAGA +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDVGSTS*WIVSIR
Trigger: TCTAATAGAAACAATCCACCAGGATGTTGAGCCCAC...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGTGATGGAATCTTCTaGAGACTGCTTAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRCDGIF*RLLNSL
Trigger: CAAGGAATTAAGCAGTCTTCAGAAGATTCCATCACA...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAGCCCAAAGGAGGTTCTaGCTTACCAGAACTGATTTT +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLAQRRF*LTRTDF
Trigger: AAAATCAGTTCTGGTAAGTCAGAACCTCCTTTGGGC...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGTCTTCATTATACAAGTaGCGAATCACCACAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SIATVYVINREIEVLGIRSSLYK*RITTAF
Trigger: GAAAGCTGTGGTGATTCGTCACTTGTATAATGAAGA...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp ACTCTTAAAATGTGGGCTCAACATCCTGGTGGATTGTTTCTATTAGAAAATGTGCATGAAAAATATGAGTaGGGGGCTATCAGCAGACAT +
Preference number: 4 (lower is better)
Translates to: TLKMWAQHPGGLFLLENVHEKYE*GAISRH
Trigger: ATGTCTGCTGATAGCCCCTCACTCATATTTTTCATG...CACATTTTCTAATAGAAACAATCCACCAGGATGTTGAGCCCACATTTTAAGAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTTGCAGGAAAATTCTCTaGAATCTCATTCAAACCACA +
Preference number: 4 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGCRKIL*NLIQTT
Trigger: TGTGGTTTGAATGAGATTTCAGAGAATTTTCCTGCA...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TTTAAGGAGCCAATAAATGCAATGAATAAAGCCAAGGCCTATTACATATGGCCTTGCATACTAGATAAATaGCTATTGGGCCTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: FKEPINAMNKAKAYYIWPCILDK*LLGLCQ
Trigger: CTGGCAAAGGCCCAATAGTCATTTATCTAGTATGCA...AGGCCATATGTAATAGGCCTTGGCTTTATTCATTGCATTTATTGGCTCCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCACTGCTTAATTCCTTGTaGTTTTTCATCACACAATTC +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPLLNSL*FFITQF
Trigger: GAATTGTGTGATGAAAAAGCACAAGGAATTAAGCAG...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGCAGATATTTTCTCATTaGCCAAAGGAGGTTCTGACT +
Preference number: 4 (lower is better)
Translates to: SIATVYVINREIEVLGIRQIFSH*PKEVLT
Trigger: AGTCAGAACCTCCTTTGGGCAATGAGAAAATATCTG...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTTAAGGAGCCAATAAATGCAATGAATAAAGCCAAGGCCTATTACATATGGCCTCCAGCCAATCCCATCTaGCTAATATTTAGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: FKEPINAMNKAKAYYIWPPANPI*LIFRRK
Trigger: TTTCCTCCTAAATATTAGGCAGATGGGATTGGCTGG...AGGCCATATGTAATAGGCCTTGGCTTTATTCATTGCATTTATTGGCTCCTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR GCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGAAAAGGAAGAATGGTCTaGTTCAGCACTTCTGTAATC +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRKGRMV*FSTSVI
Trigger: GATTACAGAAGTGCTGAAGCAGACCATTCTTCCTTT...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATATAAGTATAGAATGCTaGCAGTGTTGCATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDISIEC*QCCMVR
Trigger: TCTGACCATGCAACACTGGCAGCATTCTATACTTAT...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGAGAATAAGTATAGAATaGTGCCAGTGTTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SIATVYVINREIEVLGIRRISIE*CQCCMV
Trigger: GACCATGCAACACTGGCAGCATTCTATACTTATTCT...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAACCCCCAAAATACACTaGTTGAGCCAGAGTTTATGG +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLTPKIH*LSQSLW
Trigger: CCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGT...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAACTCTTTCACCATTCTaGATTTGTAACAGTTTACCT +
Preference number: 4 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPTLSPF*ICNSLP
Trigger: AGGTAAACTGTTACAAATCCAGAATGGTGAAAGAGT...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CCA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTAAGGCCTATTACATATaGCCTATGGAAATGTGTTTT +
Preference number: 4 (lower is better)
Translates to: SSFPATFTVELYLNLYFPKAYYI*PMEMCF
Trigger: AAAACACATTTCCATAGGCCATATGTAATAGGCCTT...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGACTGACTTACCAGAACTaGTTTTCTTTCTTTGTTGTG +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRLTYQN*FSFFVV
Trigger: CACAACAAAGAAAGAAAATCAGTTCTGGTAAGTCAG...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp AACCTAAGCATCATATCCCTCCAACTAGGAACAAACTTGTGTTTATTACCCCCACTGCTTAATTCCTTGTaGTTTTTCATCACACAATTC +
Preference number: 4 (lower is better)
Translates to: NLSIISLQLGTNLCLLPPLLNSL*FFITQF
Trigger: GAATTGTGTGATGAAAAAGCACAAGGAATTAAGCAG...TGGGGGTAATAAACACAAGTTTGTTCCTAGTTGGAGGGATATGATGCTTAGGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACACATTTACATCCTGTTaGTCAGCCTTGATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNTFTSC*SALISG
Trigger: TCCTGAAATCAAGGCTGAGCAACAGGATGTAAATGT...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATCATCAGTTTTGATATaGCCATTAAAAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRSSVLI*PLKELE
Trigger: CTCCAGCTCTTTTAATGGGCATATCAAAACTGATGA...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATTCATCAGTTTTGATATaGCCATTAAAAGAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDSSVLI*PLKELE
Trigger: CTCCAGCTCTTTTAATGGGCATATCAAAACTGATGA...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR TCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTATGTGATGGAATCTTCTaGAGACTGCTTAATTCCTTG +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLCDGIF*RLLNSL
Trigger: CAAGGAATTAAGCAGTCTTCAGAAGATTCCATCACA...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAATAAGTATAGAATGCTaGCAGTGTTGCATGGTCAGA +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLISIEC*QCCMVR
Trigger: TCTGACCATGCAACACTGGCAGCATTCTATACTTAT...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR GCA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAAGAATAAGTATAGAATaGTGCCAGTGTTGCATGGTC +
Preference number: 4 (lower is better)
Translates to: SKPMLEQFILLRSLINHLRISIE*CQCCMV
Trigger: GACCATGCAACACTGGCAGCATTCTATACTTATTCT...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS CCA 90 bp AGGCGCCTGCGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTATTTaGAATTGTGGGTTCCTGCCCGCCACGCACCACCGCAAGACCTTC +
Preference number: 5 (lower is better)
Translates to: RRLRPEALLAPTVCI*NCGFLPATHHRKTF
Trigger: GAAGGTCTTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGGCGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS GCA 90 bp CACCAGAGTCCAGCCTCCCGCAACCAGTCGCTACAGCCAGGCGCCTaGGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTATTTGGAATT +
Preference number: 5 (lower is better)
Translates to: HQSPASRNQSLQPGA*AQKRFSRRPFVFGI
Trigger: AATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGGCGCCTGGCTGTAGCGACTGGTTGCGGGAGGCTGGACTCTGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS TCA 90 bp CCAGGATTCCTCGCTGCCGATTCCACACCGCGTTCAAGACTCCTGTaGAGAGCGACTCCGCTGAGAGCCTCCTCAATGGCCAGTCCACTT +
Preference number: 5 (lower is better)
Translates to: PGFLAADSTPRSRLL*RATPLRASSMASPL
Trigger: AAGTGGACTGGCCATTGAGGAGGCTCTCAGCGGAGTCGCTCTTCACAGGAGTCTTGAACGCGGTGTGGAATCGGCAGCGAGGAATCCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS GCA 90 bp AAGCGCTTCTCGCGCCGACCGTTTGTATTTGGAATTGTGGGTTCCTaGCCGCCACGCACCACCGCAAGACCTTCAAAGCTGGGAGCTTCT +
Preference number: 5 (lower is better)
Translates to: KRFSRRPFVFGIVGS*PPRTTARPSKLGAS
Trigger: AGAAGCTCCCAGCTTTGAAGGTCTTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS GCA 90 bp CGGTTTCAAAGGCCCAGCACGACAGGGAGAGGAAAACGGAGCATATaGAACCATACACAGTCACCAGAGTCCAGCCTCCCGCAACCAGTC +
Preference number: 5 (lower is better)
Translates to: RFQRPSTTGRGKRSI*NHTQSPESSLPQPV
Trigger: GACTGGTTGCGGGAGGCTGGACTCTGGTGACTGTGTATGGTTGCATATGCTCCGTTTTCCTCTCCCTGTCGTGCTGGGCCTTTGAAACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503053.5
ENST00000514712.5
ENST00000515299.5
CDS GCA 90 bp AGACCTTCAAAGCTGGGAGCTTCTCTGTGCTCCAGGATTCCTCGCTaGCGATTCCACACCGCGTTCAAGACTCCTGTGAAGAGCGACTCC +
Preference number: 5 (lower is better)
Translates to: RPSKLGASLCSRIPR*RFHTAFKTPVKSDS
Trigger: GGAGTCGCTCTTCACAGGAGTCTTGAACGCGGTGTGGAATCGGCAGCGAGGAATCCTGGAGCACAGAGAAGCTCCCAGCTTTGAAGGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS-3UTR CAA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGCGTTTGTATTTGGAATaGTGGGTTCCTGCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQRLYLE*WVPARH
Trigger: GTGGCGGGCAGGAACCCACAATTCCAAATACAAACG...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp TCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGCGAGTAGCTTTAGCTCACAAGATGGTCTTGGCCTaGCCCAGCTCTTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: SMESSTLGHPGGRVALAHKMVLA*PSSFPA
Trigger: AGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTT...GTGAGCTAAAGCTACTCGCCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS TCA 90 bp CCGCTGAGAGCCTCCTCAATGGCCAGTCCACTTCTAACTTGCAGCTaGGAAGTTTTTCTGATCTTGATGGTCAGAGTGGCTCGTGCTACG +
Preference number: 5 (lower is better)
Translates to: PLRASSMASPLLTCS*EVFLILMVRVARAT
Trigger: CGTAGCACGAGCCACTCTGACCATCAAGATCAGAAAAACTTCTCAGCTGCAAGTTAGAAGTGGACTGGCCATTGAGGAGGCTCTCAGCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS-3UTR CAA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAAAGATGGTCTTGGCCTaGCCCAGCTCTTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPKMVLA*PSSFPA
Trigger: AGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAAGGACAGAGGAATACTaGCTGGCCTCTCTACTTCGC +
Preference number: 5 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPRTEEY*LASLLR
Trigger: GCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAGCCGACCGTTTGTATTaGGAATTGTGGGTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPADRLY*ELWVPA
Trigger: GGCAGGAACCCACAATTCCAAATACAAACGGTCGGC...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS-3UTR CAA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAGTACAAAAGATGGTCTaGGCCTTGCCCAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPVQKMV*ALPSSF
Trigger: GAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTAC...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CACTCCATGCAGGAAAATTCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGTACTTCCCTCAGCCATaGTTGGACTCTTTCACCATT +
Preference number: 5 (lower is better)
Translates to: HSMQENSMESSTLGHPGGYFPQP*LDSFTI
Trigger: AATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTA...CCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp GGCCAAGCAAAGCTCTGTGATGAAAGGTATGAAGTATGCCCACGGAGCAGCCAGCTGCTACTTTCACTGTaGAGCTATATCTTAACCTCT +
Preference number: 5 (lower is better)
Translates to: GQAKLCDERYEVCPRSSQLLLSL*SYILTS
Trigger: AGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAG...CTGGCTGCTCCGTGGGCATACTTCATACCTTTCATCACAGAGCTTTGCTTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTAAGATGGTCTTGGCCTaGCCCAGCTCTTTCCCTGCT +
Preference number: 5 (lower is better)
Translates to: SSFPATFTVELYLNLYFPKMVLA*PSSFPA
Trigger: AGCAGGGAAAGAGCTGGGCAAGGCCAAGACCATCTT...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAAGGACAGAGGAATACTaGCTGGCCTCTCTACTTCGC +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPRTEEY*LASLLR
Trigger: GCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCT...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CACTCCATGCAGGAAAATTCCATGGAATCTAGCACTTTGGGACATCCAGGTGGGCCTACAAGTAGTGATTaGGACATTTCAGTAACTCTG +
Preference number: 5 (lower is better)
Translates to: HSMQENSMESSTLGHPGGPTSSD*DISVTL
Trigger: CAGAGTTACTGAAATGTCCAAATCACTACTTGTAGG...CCCACCTGGATGTCCCAAAGTGCTAGATTCCATGGAATTTTCCTGCATGGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCAATACACAAGTCCCATTaGGAATGTTTCCAACAGGAT +
Preference number: 5 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPIHKSH*ECFQQD
Trigger: ATCCTGTTGGAAACATTCCAAATGGGACTTGTGTAT...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCACCTCTTGGTCTAAACTaGAGGACCATAGTCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPPLGLN*RTIVLQ
Trigger: CTGGAGGACTATGGTCCTCAAGTTTAGACCAAGAGG...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCATCTCGCGCCGACCGTTaGTATTTGGAATTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPSRADR*YLELWV
Trigger: AACCCACAATTCCAAATACAAACGGTCGGCGCGAGA...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS-3UTR CAA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGGTACAAAAGATGGTCTaGGCCTTGCCCAGCTCTTTC +
Preference number: 5 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWVQKMV*ALPSSF
Trigger: GAAAGAGCTGGGCAAGGCCAAGACCATCTTTTGTAC...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAAGAATGCTGCCAGTGTaGCATGGTCAGAGAATGAGC +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPRMLPV*HGQRMS
Trigger: GCTCATTCTCTGACCATGCAACACTGGCAGCATTCT...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATGCCGACCGTTTGTATTaGGAATTGTGGGTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDADRLY*ELWVPA
Trigger: GGCAGGAACCCACAATTCCAAATACAAACGGTCGGC...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR CAA 90 bp GCTATGCCTGAGATCTCTGGCAGTTCAGATGTGAAGCCCATAAAATATCTGACATACTTCCCTCAGCCATaGTTGGACTCTTTCACCATT +
Preference number: 5 (lower is better)
Translates to: AMPEISGSSDVKPIKYLTYFPQP*LDSFTI
Trigger: AATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTA...TGTCAGATATTTTATGGGCTTCACATCTGAACTGCCAGAGATCTCAGGCATAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCTTGGCCTTGCCCACAACATCCTGGTGGATaGTTTCTATTAGAAAATGTG +
Preference number: 5 (lower is better)
Translates to: RTFSLLYQRYKRWSWPCPQHPGG*FLLENV
Trigger: CACATTTTCTAATAGAAACAATCCACCAGGATGTTG...TGGGCAAGGCCAAGACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CAGCTGAGACTGGAACAAGAGGATGTAGCACTCCATGCAGGAAAATTCCATGGAAGACTGCTTAATTCCTaGTGCTTTTTCATCACACAA +
Preference number: 5 (lower is better)
Translates to: QLRLEQEDVALHAGKFHGRLLNS*CFFITQ
Trigger: TTGTGTGATGAAAAAGCACAAGGAATTAAGCAGTCT...TCCATGGAATTTTCCTGCATGGAGTGCTACATCCTCTTGTTCCAGTCTCAGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp TTTAAGGAGCCAATAAATGCAATGAATAAAGCCAAGGCCTATTACATATGGCCTAGGACAGAGGAATACTaGCTGGCCTCTCTACTTCGC +
Preference number: 5 (lower is better)
Translates to: FKEPINAMNKAKAYYIWPRTEEY*LASLLR
Trigger: GCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCT...AGGCCATATGTAATAGGCCTTGGCTTTATTCATTGCATTTATTGGCTCCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTCATATTGCTGTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACAGGCACAAGAATCACTaGAACCCGGTAGGCAGAGGT +
Preference number: 5 (lower is better)
Translates to: FILLYLIWNTVPLAYCTNRHKNH*NPVGRG
Trigger: ACCTCTGCCTACCGGGTTCAAGTGATTCTTGTGCCT...GTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATACAGCAATATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS-3UTR CAA 90 bp TTTAAGGAGCCAATAAATGCAATGAATAAAGCCAAGGCCTATTACATATGGCCTCGTTTGTATTTGGAATaGTGGGTTCCTGCCCGCCAC +
Preference number: 5 (lower is better)
Translates to: FKEPINAMNKAKAYYIWPRLYLE*WVPARH
Trigger: GTGGCGGGCAGGAACCCACAATTCCAAATACAAACG...AGGCCATATGTAATAGGCCTTGGCTTTATTCATTGCATTTATTGGCTCCTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR CAA 90 bp CAAACTTGTGTTTATTACCCCCAAAATACACTGCTTGAGCCAGAGTTTATGGATTCTCGCGCCGACCGTTaGTATTTGGAATTGTGGGTT +
Preference number: 5 (lower is better)
Translates to: QTCVYYPQNTLLEPEFMDSRADR*YLELWV
Trigger: AACCCACAATTCCAAATACAAACGGTCGGCGCGAGA...ATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGGGGTAATAAACACAAGTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000457424.6
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAAACATTTACATCCTGTaGCTCAGCCTTGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPNIYIL*LSLDFR
Trigger: CCTGAAATCAAGGCTGAGCAACAGGATGTAAATGTT...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTTACTTCCCTCAGCCATaGTTGGACTCTTTCACCATT +
Preference number: 5 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGYFPQP*LDSFTI
Trigger: AATGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTA...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCCCAAAATACACTGCTaGAGCCAGAGTTTATGGATA +
Preference number: 5 (lower is better)
Translates to: SSFPATFTVELYLNLYFPPKIHC*SQSLWI
Trigger: TATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGG...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS TCA 90 bp AGTCACCTGTTGCCATTACTTAACATCAGATTCAGCTCCAATTCTTaGAATCGTCTAATTTTTCACCTAGCAGAGCACAGACCAGCCAAT +
Preference number: 5 (lower is better)
Translates to: SHLLPLLNIRFSSNS*NRLIFHLAEHRPAN
Trigger: ATTGGCTGGTCTGTGCTCTGCTAGGTGAAAAATTAGACGATTTCAAGAATTGGAGCTGAATCTGATGTTAAGTAATGGCAACAGGTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000503780.6
ENST00000515299.5
CDS-3UTR CAA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTAACATTTACATCCTGTaGCTCAGCCTTGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGNIYIL*LSLDFR
Trigger: CCTGAAATCAAGGCTGAGCAACAGGATGTAAATGTT...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp CTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGCTGCTACTTTCACTGTaGAGCTATATCTTAACCTCT +
Preference number: 5 (lower is better)
Translates to: LLSLLSYILTSTSLSHCWLLLSL*SYILTS
Trigger: AGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAG...CCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTCTGCTACTTTCACTGTaGAGCTATATCTTAACCTCT +
Preference number: 5 (lower is better)
Translates to: SSFPATFTVELYLNLYFPLLLSL*SYILTS
Trigger: AGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAG...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGATGGTCCCAAAATACACTGCTaGAGCCAGAGTTTATGGATA +
Preference number: 5 (lower is better)
Translates to: LIWNTVPLAYCTNGTKDGPKIHC*SQSLWI
Trigger: TATCCATAAACTCTGGCTCAAGCAGTGTATTTTGGG...ACCATCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp GCTATGCCTGAGATCTCTGGCAGTTCAGATGTGAAGCCCATAAAATATCTGACACAACTAGGAACAAACTaGTGTTTATTACCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: AMPEISGSSDVKPIKYLTQLGTN*CLLPPK
Trigger: TTTTGGGGGTAATAAACACAAGTTTGTTCCTAGTTG...TGTCAGATATTTTATGGGCTTCACATCTGAACTGCCAGAGATCTCAGGCATAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp AGCTCTTTCCCTGCTACTTTCACTGTTGAGCTATATCTTAACCTCTACTTCCCTGCTATGAGCTCTACATaGGATTCCATTATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SSFPATFTVELYLNLYFPAMSST*DSIISS
Trigger: AGAACTTATAATGGAATCCAATGTAGAGCTCATAGC...AGGGAAGTAGAGGTTAAGATATAGCTCAACAGTGAAAGTAGCAGGGAAAGAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCAGCTATGAGCTCTACATaGGATTCCATTATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPAMSST*DSIISS
Trigger: AGAACTTATAATGGAATCCAATGTAGAGCTCATAGC...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTATTCCCTCAGCCATTGTaGGACTCTTTCACCATTCTG +
Preference number: 5 (lower is better)
Translates to: SKPMLEQFILLRSLINHLFPQPL*DSFTIL
Trigger: CAGAATGGTGAAAGAGTCCAACAATGGCTGAGGGAA...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TTGAGCTATATCTTAACCTCTACTTCCCTCAGCCATTGTTGGACTCTTTCACCACAACATCCTGGTGGATaGTTTCTATTAGAAAATGTG +
Preference number: 5 (lower is better)
Translates to: LSYILTSTSLSHCWTLSPQHPGG*FLLENV
Trigger: CACATTTTCTAATAGAAACAATCCACCAGGATGTTG...TGGTGAAAGAGTCCAACAATGGCTGAGGGAAGTAGAGGTTAAGATATAGCTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGAATGACTATTGGGCCTTaGCCAGACCACAAAATTGAA +
Preference number: 5 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRMTIGP*PDHKIE
Trigger: TTCAATTTTGTGGTCTGGCAAAGGCCCAATAGTCAT...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp ACTCTTAAAATGTGGGCTCAACATCCTGGTGGATTGTTTCTATTAGAAAATGTGATGACTATTGGGCCTTaGCCAGACCACAAAATTGAA +
Preference number: 5 (lower is better)
Translates to: TLKMWAQHPGGLFLLENVMTIGP*PDHKIE
Trigger: TTCAATTTTGTGGTCTGGCAAAGGCCCAATAGTCAT...CACATTTTCTAATAGAAACAATCCACCAGGATGTTGAGCCCACATTTTAAGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TCCATTGCCACTGTGTATGTAATCAACAGAGAAATAGAGGTCTTAGGTATAAGGGCTATGAGCTCTACATaGGATTCCATTATAAGTTCT +
Preference number: 5 (lower is better)
Translates to: SIATVYVINREIEVLGIRAMSST*DSIISS
Trigger: AGAACTTATAATGGAATCCAATGTAGAGCTCATAGC...CCTTATACCTAAGACCTCTATTTCTCTGTTGATTACATACACAGTGGCAATGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAAACATTTACATCCTGTaGCTCAGCCTTGATTTCAGG +
Preference number: 5 (lower is better)
Translates to: SKPMLEQFILLRSLINHLNIYIL*LSLDFR
Trigger: CCTGAAATCAAGGCTGAGCAACAGGATGTAAATGTT...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp GTATTTAATATGGAACACCGTACCTTTAGCCTACTGTACCAACGGTACAAAAGACCATTTTCTGGATTGTaGTTTCCTCTGAAATCTCAT +
Preference number: 5 (lower is better)
Translates to: VFNMEHRTFSLLYQRYKRPFSGL*FPLKSH
Trigger: ATGAGATTTCAGAGGAAACAACAATCCAGAAAATGG...TCTTTTGTACCGTTGGTACAGTAGGCTAAAGGTACGGTGTTCCATATTAAATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396791.7
CDS TCA 90 bp CTTAATGTATCCTCAGAAATGTCAACATTATCTTCATTATACAAGTaGCGAATCACCACAGCTTTCTTCTTTCCTGAGGTCATAAACCTG +
Preference number: 5 (lower is better)
Translates to: LNVSSEMSTLSSLYK*RITTAFFFPEVINL
Trigger: CAGGTTTATGACCTCAGGAAAGAAGAAAGCTGTGGTGATTCGTCACTTGTATAATGAAGATAATGTTGACATTTCTGAGGATACATTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503780.6
ENST00000515299.5
CDS-3UTR CAA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTAAGACTGCTTAATTCCTaGTGCTTTTTCATCACACAA +
Preference number: 5 (lower is better)
Translates to: SKPMLEQFILLRSLINHLRLLNS*CFFITQ
Trigger: TTGTGTGATGAAAAAGCACAAGGAATTAAGCAGTCT...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS-3UTR CAA 90 bp TCTAAACCAATGTTAGAGCAATTCATCCTTTTACGCTCTCTAATTAACCACCTACAACTAGGAACAAACTaGTGTTTATTACCCCCAAAA +
Preference number: 5 (lower is better)
Translates to: SKPMLEQFILLRSLINHLQLGTN*CLLPPK
Trigger: TTTTGGGGGTAATAAACACAAGTTTGTTCCTAGTTG...TAGGTGGTTAATTAGAGAGCGTAAAAGGATGAATTGCTCTAACATTGGTTTAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426172.3
ENST00000457424.6
CDS GCA 72 bp CCAGCCTCCCGCAACCAGTCGCTACAGCCAGGCGCCTaGGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTA +
Preference number: 6 (lower is better)
Translates to: PASRNQSLQPGA*AQKRFSRRPFV
Trigger: TACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGGCGCCTGGCTGTAGCGACTGGTTGCGGGAGGCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
ENST00000515299.5
CDS CCA 72 bp CGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTATTTaGAATTGTGGGTTCCTGCCCGCCACGCACCACCGC +
Preference number: 6 (lower is better)
Translates to: RPEALLAPTVCI*NCGFLPATHHR
Trigger: GCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS CAA 72 bp GCGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTATTaGGAATTGTGGGTTCCTGCCCGCCACGCACCACCG +
Preference number: 6 (lower is better)
Translates to: APRSASRADRLY*ELWVPARHAPP
Trigger: CGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS CAA 72 bp GCGCCTGCGCCCAGAAGCGCTTCTCGCGCCGACCGTTaGTATTTGGAATTGTGGGTTCCTGCCCGCCACGCA +
Preference number: 6 (lower is better)
Translates to: APAPRSASRADR*YLELWVPARHA
Trigger: TGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGGCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS CAA 90 bp CAGGCGCCTGCGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTATTaGGAATTGTGGGTTCCTGCCCGCCACGCACCACCGCAAGACCTT +
Preference number: 6 (lower is better)
Translates to: QAPAPRSASRADRLY*ELWVPARHAPPQDL
Trigger: AAGGTCTTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGGCGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS CAA 90 bp TACAGCCAGGCGCCTGCGCCCAGAAGCGCTTCTCGCGCCGACCGTTaGTATTTGGAATTGTGGGTTCCTGCCCGCCACGCACCACCGCAA +
Preference number: 6 (lower is better)
Translates to: YSQAPAPRSASRADR*YLELWVPARHAPPQ
Trigger: TTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGGCGCCTGGCTGTA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS CAA 90 bp CCTGCGCCCAGAAGCGCTTCTCGCGCCGACCGTTTGTATTTGGAATaGTGGGTTCCTGCCCGCCACGCACCACCGCAAGACCTTCAAAGC +
Preference number: 6 (lower is better)
Translates to: PAPRSASRADRLYLE*WVPARHAPPQDLQS
Trigger: GCTTTGAAGGTCTTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCTGGGCGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS TCA 72 bp CTCGCTGCCGATTCCACACCGCGTTCAAGACTCCTGTaGAGAGCGACTCCGCTGAGAGCCTCCTCAATGGCC +
Preference number: 6 (lower is better)
Translates to: LAADSTPRSRLL*RATPLRASSMA
Trigger: GGCCATTGAGGAGGCTCTCAGCGGAGTCGCTCTTCACAGGAGTCTTGAACGCGGTGTGGAATCGGCAGCGAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS CAA 72 bp AGAAGCGCTTCTCGCGCCGACCGTTTGTATTTGGAATaGTGGGTTCCTGCCCGCCACGCACCACCGCAAGAC +
Preference number: 6 (lower is better)
Translates to: RSASRADRLYLE*WVPARHAPPQD
Trigger: GTCTTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGAGAAGCGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000514712.5
CDS GCA 72 bp TCGCGCCGACCGTTTGTATTTGGAATTGTGGGTTCCTaGCCGCCACGCACCACCGCAAGACCTTCAAAGCTG +
Preference number: 6 (lower is better)
Translates to: SRRPFVFGIVGS*PPRTTARPSKL
Trigger: CAGCTTTGAAGGTCTTGCGGTGGTGCGTGGCGGGCAGGAACCCACAATTCCAAATACAAACGGTCGGCGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS GCA 72 bp AGGCCCAGCACGACAGGGAGAGGAAAACGGAGCATATaGAACCATACACAGTCACCAGAGTCCAGCCTCCCG +
Preference number: 6 (lower is better)
Translates to: RPSTTGRGKRSI*NHTQSPESSLP
Trigger: CGGGAGGCTGGACTCTGGTGACTGTGTATGGTTGCATATGCTCCGTTTTCCTCTCCCTGTCGTGCTGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000503053.5
ENST00000514712.5
ENST00000515299.5
CDS GCA 72 bp AAGCTGGGAGCTTCTCTGTGCTCCAGGATTCCTCGCTaGCGATTCCACACCGCGTTCAAGACTCCTGTGAAG +
Preference number: 6 (lower is better)
Translates to: KLGASLCSRIPR*RFHTAFKTPVK
Trigger: CTTCACAGGAGTCTTGAACGCGGTGTGGAATCGGCAGCGAGGAATCCTGGAGCACAGAGAAGCTCCCAGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS CCA 72 bp TCGTCTAATTTTTCACCACCGCAAGACCTTCAAAGCTaGGAGCTTCTCTGTGCTCCAGGATTCCTCGCTGCC +
Preference number: 6 (lower is better)
Translates to: SSNFSPPQDLQS*ELLCAPGFLAA
Trigger: GGCAGCGAGGAATCCTGGAGCACAGAGAAGCTCCCAGCTTTGAAGGTCTTGCGGTGGTGAAAAATTAGACGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS CAA 90 bp AGCGACTCCGCTGAGAGCCTCCTCAATGGCCAGTCCACTTCTAACTaGCAGCTGAGAAGTTTTTCTGATCTTGATGGTCAGAGTGGCTCG +
Preference number: 6 (lower is better)
Translates to: SDSAESLLNGQSTSN*QLRSFSDLDGQSGS
Trigger: CGAGCCACTCTGACCATCAAGATCAGAAAAACTTCTCAGCTGCAAGTTAGAAGTGGACTGGCCATTGAGGAGGCTCTCAGCGGAGTCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS CAA 90 bp GGAGGAAACCAACTGAAGCAAGATAGGTTCACAAATCAGGTACACTaGATGCTTACAGTCACCAGAGTCCAGCCTCCCGCAACCAGTCGC +
Preference number: 6 (lower is better)
Translates to: GGNQLKQDRFTNQVH*MLTVTRVQPPATSR
Trigger: GCGACTGGTTGCGGGAGGCTGGACTCTGGTGACTGTAAGCATCAAGTGTACCTGATTTGTGAACCTATCTTGCTTCAGTTGGTTTCCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS TCA 72 bp GCCTCCTCAATGGCCAGTCCACTTCTAACTTGCAGCTaGGAAGTTTTTCTGATCTTGATGGTCAGAGTGGCT +
Preference number: 6 (lower is better)
Translates to: ASSMASPLLTCS*EVFLILMVRVA
Trigger: AGCCACTCTGACCATCAAGATCAGAAAAACTTCTCAGCTGCAAGTTAGAAGTGGACTGGCCATTGAGGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS CAA 72 bp CAACTGAAGCAAGATAGGTTCACAAATCAGGTACACTaGATGCTTACAGTCACCAGAGTCCAGCCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: QLKQDRFTNQVH*MLTVTRVQPPA
Trigger: TGCGGGAGGCTGGACTCTGGTGACTGTAAGCATCAAGTGTACCTGATTTGTGAACCTATCTTGCTTCAGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000396791.7
ENST00000457424.6
CDS CAA 90 bp GGAGGAAACCAACTGAAGCAAGATAGGTTCACAAATCAGGTACACTaGATGCTTCAAGCAGCCACCAGCAAAGAAGCCGGTTTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: GGNQLKQDRFTNQVH*MLQAATSKEAGFKG
Trigger: GCCTTTGAAACCGGCTTCTTTGCTGGTGGCTGCTTGAAGCATCAAGTGTACCTGATTTGTGAACCTATCTTGCTTCAGTTGGTTTCCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515299.5
CDS CCA 72 bp GGTAAAAGAATAGCTGATGATGGGCAAAGATGCTGCTaGGTCTCCCTTTATCAAACCTACACAGTCCACCTC +
Preference number: 6 (lower is better)
Translates to: GKRIADDGQRCC*VSLYQTYTVHL
Trigger: GAGGTGGACTGTGTAGGTTTGATAAAGGGAGACCCAGCAGCATCTTTGCCCATCATCAGCTATTCTTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503053.5
ENST00000503780.6
ENST00000505124.5
ENST00000514712.5
ENST00000515299.5
CDS CCA 72 bp TGCTGTACTATAGCCAGAGGACAGAGGAATACTTGCTaGCCTCTCTACTTCGCTTTTTCTGTGAGGATTCAG +
Preference number: 6 (lower is better)
Translates to: CCTIARGQRNTC*PLYFAFSVRIQ
Trigger: CTGAATCCTCACAGAAAAAGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCTCTGGCTATAGTACAGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503780.6
ENST00000508483.1
CDS CAA 72 bp CAACTGAAGCAAGATAGGTTCACAAATCAGGTACACTaGATGCTTCACCGCAAGACCTTCAAAGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: QLKQDRFTNQVH*MLHRKTFKAGS
Trigger: GCTCCCAGCTTTGAAGGTCTTGCGGTGAAGCATCAAGTGTACCTGATTTGTGAACCTATCTTGCTTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503780.6
CDS CAA 72 bp CAACTGAAGCAAGATAGGTTCACAAATCAGGTACACTaGATGCTTCAAGCAGCCACCAGCAAAGAAGCCGGT +
Preference number: 6 (lower is better)
Translates to: QLKQDRFTNQVH*MLQAATSKEAG
Trigger: ACCGGCTTCTTTGCTGGTGGCTGCTTGAAGCATCAAGTGTACCTGATTTGTGAACCTATCTTGCTTCAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000515299.5
CDS GCA 72 bp TTTCACCTAGCAGAGCACAGACCAGCCAATCCCATCTaGCTAATATTTAGGAGGAAACCAACTGAAGCAAGA +
Preference number: 6 (lower is better)
Translates to: FHLAEHRPANPI*LIFRRKPTEAR
Trigger: TCTTGCTTCAGTTGGTTTCCTCCTAAATATTAGGCAGATGGGATTGGCTGGTCTGTGCTCTGCTAGGTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000396791.7
ENST00000457424.6
ENST00000503780.6
ENST00000515299.5
CDS CAA 72 bp ATGATGCTGTACTATAGCCAGAGGACAGAGGAATACTaGCTGGCCTCTCTACTTCGCTTTTTCTGTGAGGAT +
Preference number: 6 (lower is better)
Translates to: MMLYYSQRTEEY*LASLLRFFCED
Trigger: ATCCTCACAGAAAAAGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCTCTGGCTATAGTACAGCATCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503780.6
ENST00000508483.1
CDS CAA 90 bp TTGAATCTGATGATGCTGTACTATAGCCAGAGGACAGAGGAATACTaGCTGGCCTCTCTACTTCGCTTTTTCTGTGAGGATTCAGAAGGT +
Preference number: 6 (lower is better)
Translates to: LNLMMLYYSQRTEEY*LASLLRFFCEDSEG
Trigger: ACCTTCTGAATCCTCACAGAAAAAGCGAAGTAGAGAGGCCAGCAAGTATTCCTCTGTCCTCTGGCTATAGTACAGCATCATCAGATTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503780.6
ENST00000508483.1
CDS CAA 90 bp CTGCCACTGATATCAACGCCAACAGCCTCTGCAGATATTTTCTCATaGCCCAAAGGAGGTTCTGACTTACCAGAACTGATTTTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: LPLISTPTASADIFS*PKGGSDLPELIFFL
Trigger: AAGAAAGAAAATCAGTTCTGGTAAGTCAGAACCTCCTTTGGGCAATGAGAAAATATCTGCAGAGGCTGTTGGCGTTGATATCAGTGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503780.6
ENST00000515299.5
CDS GCA 72 bp AGAAGTTTTTCTGATCTTGATGGTCAGAGTGGCTCGTaGTACGAAGTGAGAAACAAGGAATCTATAGCGAAT +
Preference number: 6 (lower is better)
Translates to: RSFSDLDGQSGS*YEVRNKESIAN
Trigger: ATTCGCTATAGATTCCTTGTTTCTCACTTCGTAGCACGAGCCACTCTGACCATCAAGATCAGAAAAACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505124.5
CDS TCA 72 bp TCCTCAGAAATGTCAACATTATCTTCATTATACAAGTaGCGAATCACCACAGCTTTCTTCTTTCCTGAGGTC +
Preference number: 6 (lower is better)
Translates to: SSEMSTLSSLYK*RITTAFFFPEV
Trigger: GACCTCAGGAAAGAAGAAAGCTGTGGTGATTCGTCACTTGTATAATGAAGATAATGTTGACATTTCTGAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000296519.6
ENST00000396791.7
ENST00000426172.3
ENST00000457424.6
ENST00000503780.6
ENST00000515299.5
CDS TCA 72 bp TTGCCATTACTTAACATCAGATTCAGCTCCAATTCTTaGAATCGTCTAATTTTTCACCACCGCAAGACCTTC +
Preference number: 6 (lower is better)
Translates to: LPLLNIRFSSNS*NRLIFHHRKTF
Trigger: GAAGGTCTTGCGGTGGTGAAAAATTAGACGATTTCAAGAATTGGAGCTGAATCTGATGTTAAGTAATGGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000505124.5