RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP43 (Homo sapiens)

Ensembl gene IDs: ENSG00000213066

Ensembl transcript IDs: ENST00000349556.4, ENST00000366847.9, ENST00000476078.1, ENST00000488525.1, ENST00000496181.1, ENST00000622353.4, ENST00000646989.1

Found 555 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGCAAGCTCTCAGGGAGCTCTGGAGCCAGAATGGACTCAGGCTaGGAGGGCCGGGCCTCTTACCCTGAGGCAGAATGGTCGTTGGAT +
Preference number: 1 (lower is better)
Translates to: PGKLSGSSGARMDSG*EGRASYPEAEWSLD
Trigger: ATCCAACGACCATTCTGCCTCAGGGTAAGAGGCCCGGCCCTCTCAGCCTGAGTCCATTCTGGCTCCAGAGCTCCCTGAGAGCTTGCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp GAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCTGAGCTTGGTGGGTaGGGCAAATTCACAGGACGGCCTTCTCCTGAACCAGATCCCCTT +
Preference number: 1 (lower is better)
Translates to: EGTSFRGPAPAELGG*GKFTGRPSPEPDPL
Trigger: AAGGGGATCTGGTTCAGGAGAAGGCCGTCCTGTGAATTTGCCCCACCCACCAAGCTCAGCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp GGGAATCCTCCCCACCCAATGCCACAGGAGGGCTCCAACTTGGGCTaGGTGTGTTTTTCTCCAGGAAGAGCTGCCTCTCCTGTCCTGCCC +
Preference number: 1 (lower is better)
Translates to: GNPPHPMPQEGSNLG*VCFSPGRAASPVLP
Trigger: GGGCAGGACAGGAGAGGCAGCTCTTCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTGTGGCATTGGGTGGGGAGGATTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp GCAGAGCACACAGGCATTCTCCCAGCCAGGTTTCCACGTGGACATTaGAGGCAGCGCCCCCTATTCAGCACATGCTGGAGAGCCAAGTGC +
Preference number: 1 (lower is better)
Translates to: AEHTGILPARFPRGH*RQRPLFSTCWRAKC
Trigger: GCACTTGGCTCTCCAGCATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGGAGAATGCCTGTGTGCTCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp ATGGCGGGAATCCTCCCCACCCAATGCCACAGGAGGGCTCCAACTTaGGCTGGGTGTGTTTTTCTCCAGGAAGAGCTGCCTCTCCTGTCC +
Preference number: 1 (lower is better)
Translates to: MAGILPTQCHRRAPT*AGCVFLQEELPLLS
Trigger: GGACAGGAGAGGCAGCTCTTCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTGTGGCATTGGGTGGGGAGGATTCCCGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp TCCCCATGCAGAGCACACAGGCATTCTCCCAGCCAGGTTTCCACGTaGACATTGCAGGCAGCGCCCCCTATTCAGCACATGCTGGAGAGC +
Preference number: 1 (lower is better)
Translates to: SPCRAHRHSPSQVST*TLQAAPPIQHMLES
Trigger: GCTCTCCAGCATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGGAGAATGCCTGTGTGCTCTGCATGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp GCAGAGCACACGTTTCTGCAGGCAGGGCCACAACGCAAAGTCGGATaGCACGAGGGGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATT +
Preference number: 1 (lower is better)
Translates to: AEHTFLQAGPQRKVG*HEGPARPYLVRGFI
Trigger: AATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCCCCTCGTGTCATCCGACTTTGCGTTGTGGCCCTGCCTGCAGAAACGTGTGCTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp CGTGAAGTTCCAACACTTACCGGCAGGGAGAGCACTGCCCCTTGGTaGAGCAATGCCCGCAGCAGGGATGAACCCATGAGAGCTGCTAGA +
Preference number: 1 (lower is better)
Translates to: REVPTLTGRESTAPW*SNARSRDEPMRAAR
Trigger: TCTAGCAGCTCTCATGGGTTCATCCCTGCTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTCCCTGCCGGTAAGTGTTGGAACTTCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp AGAGTAACTTGCCAGGCAAGCTCTCAGGGAGCTCTGGAGCCAGAATaGACTCAGGCTGAGAGGGCCGGGCCTCTTACCCTGAGGCAGAAT +
Preference number: 1 (lower is better)
Translates to: RVTCQASSQGALEPE*TQAERAGPLTLRQN
Trigger: ATTCTGCCTCAGGGTAAGAGGCCCGGCCCTCTCAGCCTGAGTCCATTCTGGCTCCAGAGCTCCCTGAGAGCTTGCCTGGCAAGTTACTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp GGAGAGGCCATGAGAATGCCCACAGCAGCCAACAAAGCCCTTCACTaGAAAGGGATGTGGTGGCACATCACAGGATGGGGCCACCTCTGC +
Preference number: 1 (lower is better)
Translates to: GEAMRMPTAANKALH*KGMWWHITGWGHLC
Trigger: GCAGAGGTGGCCCCATCCTGTGATGTGCCACCACATCCCTTTTCAGTGAAGGGCTTTGTTGGCTGCTGTGGGCATTCTCATGGCCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp CAGACAAGGAGGGGCAAATATCACACCTTGAGACAGGAAGGGCTTTaGCAAGCTCAGGTGCAGAGGCTGTGCAGCAGTGGGCTGGCACAG +
Preference number: 1 (lower is better)
Translates to: QTRRGKYHTLRQEGL*QAQVQRLCSSGLAQ
Trigger: CTGTGCCAGCCCACTGCTGCACAGCCTCTGCACCTGAGCTTGCCAAAGCCCTTCCTGTCTCAAGGTGTGATATTTGCCCCTCCTTGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp AAACGTGAAGTTCCAACACTTACCGGCAGGGAGAGCACTGCCCCTTaGTGGAGCAATGCCCGCAGCAGGGATGAACCCATGAGAGCTGCT +
Preference number: 1 (lower is better)
Translates to: KREVPTLTGRESTAP*WSNARSRDEPMRAA
Trigger: AGCAGCTCTCATGGGTTCATCCCTGCTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTCCCTGCCGGTAAGTGTTGGAACTTCACGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp AAAACAAACCTCCAGCTAAAACCGCAGAATGACTGGCCTCCTGCATaGCACTGTCCACGCTCCTCCATGCAGTACCTCCTGCCTCCACCC +
Preference number: 1 (lower is better)
Translates to: KTNLQLKPQNDWPPA*HCPRSSMQYLLPPP
Trigger: GGGTGGAGGCAGGAGGTACTGCATGGAGGAGCGTGGACAGTGGCATGCAGGAGGCCAGTCATTCTGCGGTTTTAGCTGGAGGTTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp CTCAGCTCACTGCAAACTCTGACTCCAGGGTTCAAGCAATTCCCCTaGCTCAGCCTCCCAAGTAGATGGGACTATAGGCGGGCACGCACT +
Preference number: 1 (lower is better)
Translates to: LSSLQTLTPGFKQFP*LSLPSRWDYRRART
Trigger: AGTGCGTGCCCGCCTATAGTCCCATCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCTGGAGTCAGAGTTTGCAGTGAGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp AACGCTGTCCCTCCTACCTCAGAGGCCTTGCTGTTTCCTTCTGTCTaGCACTCTCATTCACCCGGTGCACACCCAGGTTTCCTTGAACCT +
Preference number: 1 (lower is better)
Translates to: NAVPPTSEALLFPSV*HSHSPGAHPGFLEP
Trigger: AGGTTCAAGGAAACCTGGGTGTGCACCGGGTGAATGAGAGTGGCAGACAGAAGGAAACAGCAAGGCCTCTGAGGTAGGAGGGACAGCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp GGTGCACACCCAGGTTTCCTTGAACCTGAGGACACTTTTCCAATCTaGCTTCCTCGGGGAAACTTTGTCAGCCTGGAGGTCCTCTGGCCA +
Preference number: 1 (lower is better)
Translates to: GAHPGFLEPEDTFPI*LPRGNFVSLEVLWP
Trigger: TGGCCAGAGGACCTCCAGGCTGACAAAGTTTCCCCGAGGAAGTCAGATTGGAAAAGTGTCCTCAGGTTCAAGGAAACCTGGGTGTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp CCCAGAAATCAACGCCTGCTGGAAGCTAGAATTGCAAGAGTAACTTaGCAGGCAAGCTCTCAGGGAGCTCTGGAGCCAGAATGGACTCAG +
Preference number: 1 (lower is better)
Translates to: PRNQRLLEARIARVT*QASSQGALEPEWTQ
Trigger: CTGAGTCCATTCTGGCTCCAGAGCTCCCTGAGAGCTTGCCTGGCAAGTTACTCTTGCAATTCTAGCTTCCAGCAGGCGTTGATTTCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp GTGGCACATCACAGGATGGGGCCACCTCTGCATCTGCAGGTGGAGTaGACAGAAGAAATCAGCCAACTGCTTGTTGAAATGTACGGAGTG +
Preference number: 1 (lower is better)
Translates to: VAHHRMGPPLHLQVE*TEEISQLLVEMYGV
Trigger: CACTCCGTACATTTCAACAAGCAGTTGGCTGATTTCTTCTGTCCACTCCACCTGCAGATGCAGAGGTGGCCCCATCCTGTGATGTGCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp TCATGGCAGAAGGCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTaGCAGGACAGCCTGAGTGCAAGCAGGGGAAATGCCAGATGCTTA +
Preference number: 1 (lower is better)
Translates to: SWQKAKEKQGTFFTV*QDSLSASRGNARCL
Trigger: TAAGCATCTGGCATTTCCCCTGCTTGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGCCTTCTGCCATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp GTGTGGAACTCTGAACGCAGCATTAGGACAACTCACAAAGGTAGCTaGCCTGGATTTCCTCCCCAAACACGTCCCTTCCTAGAGCAGGAA +
Preference number: 1 (lower is better)
Translates to: VWNSERSIRTTHKGS*PGFPPQTRPFLEQE
Trigger: TTCCTGCTCTAGGAAGGGACGTGTTTGGGGAGGAAATCCAGGGCAGCTACCTTTGTGAGTTGTCCTAATGCTGCGTTCAGAGTTCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp AAAGGGATGTGGTGGCACATCACAGGATGGGGCCACCTCTGCATCTaGAGGTGGAGTGGACAGAAGAAATCAGCCAACTGCTTGTTGAAA +
Preference number: 1 (lower is better)
Translates to: KGMWWHITGWGHLCI*RWSGQKKSANCLLK
Trigger: TTTCAACAAGCAGTTGGCTGATTTCTTCTGTCCACTCCACCTGCAGATGCAGAGGTGGCCCCATCCTGTGATGTGCCACCACATCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp GGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTaGAAGCAGGGGAAATGCCAGATGCTTATAAAACCATCAGACCTT +
Preference number: 1 (lower is better)
Translates to: GEARHLLHSVAGQPE*KQGKCQMLIKPSDL
Trigger: AAGGTCTGATGGTTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp AGAGGTTTAATTGACTCACAGTTCAGCATGGCTGGGGAGGCCTCATaGAACTTACACTCATGGCAGAAGGCAAAGGAGAAGCAAGGCACC +
Preference number: 1 (lower is better)
Translates to: RGLIDSQFSMAGEAS*NLHSWQKAKEKQGT
Trigger: GGTGCCTTGCTTCTCCTTTGCCTTCTGCCATGAGTGTAAGTTTCATGAGGCCTCCCCAGCCATGCTGAACTGTGAGTCAATTAAACCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp CTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAAGCAGGGGAAATaGCAGATGCTTATAAAACCATCAGACCTTGTGAGACTCACTATC +
Preference number: 1 (lower is better)
Translates to: LLHSVAGQPECKQGK*QMLIKPSDLVRLTI
Trigger: GATAGTGAGTCTCACAAGGTCTGATGGTTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCAGGCTGTCCTGCCACACTGTGAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp GCCAAGTTGCCCATCCAGGCTTCTAGCCACTGTAGTGGAGTTGCATaGTTTACATTCAATTACTCTGCTTTTCCGTTTTCCTGCACGTGC +
Preference number: 1 (lower is better)
Translates to: AKLPIQASSHCSGVA*FTFNYSAFPFSCTC
Trigger: GCACGTGCAGGAAAACGGAAAAGCAGAGTAATTGAATGTAAATCATGCAACTCCACTACAGTGGCTAGAAGCCTGGATGGGCAACTTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp TCTGACCCCCAGAGATTGAGTTTCCTGCCAGGAGTTTATCAAAAGTaGCCCAGAAATCAACGCCTGCTGGAAGCTAGAATTGCAAGAGTA +
Preference number: 1 (lower is better)
Translates to: SDPQRLSFLPGVYQK*PRNQRLLEARIARV
Trigger: TACTCTTGCAATTCTAGCTTCCAGCAGGCGTTGATTTCTGGGGCACTTTTGATAAACTCCTGGCAGGAAACTCAATCTCTGGGGGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp GTGAAAGGCAAGGGATGTCCTCCAGGATACACTGTTCTAATAAGATaGAGGGAAGAGGGGGATTTCATCTTCCAAAGAGTTGTCACTGGG +
Preference number: 1 (lower is better)
Translates to: VKGKGCPPGYTVLIR*REEGDFIFQRVVTG
Trigger: CCCAGTGACAACTCTTTGGAAGATGAAATCCCCCTCTTCCCTGCATCTTATTAGAACAGTGTATCCTGGAGGACATCCCTTGCCTTTCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp AACAACCACACTGGGGGACTGCAACAAGATTACATCTGCACGTGGTaGTGTTTACTAAGACATGAAGAGCTGAAGGAGACTGAGATAGCA +
Preference number: 1 (lower is better)
Translates to: NNHTGGLQQDYICTW*CLLRHEELKETEIA
Trigger: TGCTATCTCAGTCTCCTTCAGCTCTTCATGTCTTAGTAAACAGCACCACGTGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTGGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR GCA 90 bp CAATGTTCAAATTTCGCATTGAACATCCCCTCTCTGAAGAAGGTTTaGTCACACCTTTACATCCCCATGCAGAGCACACAGGCATTCTCC +
Preference number: 1 (lower is better)
Translates to: QCSNFALNIPSLKKV*SHLYIPMQSTQAFS
Trigger: GGAGAATGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGAGGGGATGTTCAATGCGAAATTTGAACATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 90 bp AAGATGCAGGGAAGAGGGGGATTTCATCTTCCAAAGAGTTGTCACTaGGAATTTACAAAGGCCCCTGGAAATAAGCTCAGGGTATCCACT +
Preference number: 1 (lower is better)
Translates to: KMQGRGGFHLPKSCH*EFTKAPGNKLRVST
Trigger: AGTGGATACCCTGAGCTTATTTCCAGGGGCCTTTGTAAATTCCCAGTGACAACTCTTTGGAAGATGAAATCCCCCTCTTCCCTGCATCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp GCATTTTATAACAACCACACTGGGGGACTGCAACAAGATTACATCTaGACGTGGTGCTGTTTACTAAGACATGAAGAGCTGAAGGAGACT +
Preference number: 1 (lower is better)
Translates to: AFYNNHTGGLQQDYI*TWCCLLRHEELKET
Trigger: AGTCTCCTTCAGCTCTTCATGTCTTAGTAAACAGCACCACGTGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTGGTTGTTATAAAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR CCA 90 bp TATAACAACCACACTGGGGGACTGCAACAAGATTACATCTGCACGTaGTGCTGTTTACTAAGACATGAAGAGCTGAAGGAGACTGAGATA +
Preference number: 1 (lower is better)
Translates to: YNNHTGGLQQDYICT*CCLLRHEELKETEI
Trigger: TATCTCAGTCTCCTTCAGCTCTTCATGTCTTAGTAAACAGCACCACGTGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTGGTTGTTATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR CCA 90 bp ACATTTGAGATGACTTTCCAGGCTTTTGCATTTCTGACAACCAGATaGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGG +
Preference number: 1 (lower is better)
Translates to: TFEMTFQAFAFLTTR*PYLNLYLLNSWLNW
Trigger: CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGTCAGAAATGCAAAAGCCTGGAAAGTCATCTCAAATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp AGAATACTGATATTAAATAACTTGCCCAACATCACTCAGCCAAGTTaGCCATCCAGGCTTCTAGCCACTGTAGTGGAGTTGCATGATTTA +
Preference number: 1 (lower is better)
Translates to: RILILNNLPNITQPS*PSRLLATVVELHDL
Trigger: TAAATCATGCAACTCCACTACAGTGGCTAGAAGCCTGGATGGGCAACTTGGCTGAGTGATGTTGGGCAAGTTATTTAATATCAGTATTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 90 bp TCATCTGTCTTTCATGACATACATTCACTTTCCTTAAATGTCAGATaGTTGTTGAACGTGTGGAACTCTGAACGCAGCATTAGGACAACT +
Preference number: 1 (lower is better)
Translates to: SSVFHDIHSLSLNVR*LLNVWNSERSIRTT
Trigger: AGTTGTCCTAATGCTGCGTTCAGAGTTCCACACGTTCAACAAGCATCTGACATTTAAGGAAAGTGAATGTATGTCATGAAAGACAGATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp TTCCCAATTACTATAAATAACTTGACTATTGTAGAACCTAACATTTaGGATGACTTTCCAGGCTTTTGCATTTCTGACAACCAGATGGCC +
Preference number: 1 (lower is better)
Translates to: FPITINNLTIVEPNI*DDFPGFCISDNQMA
Trigger: GGCCATCTGGTTGTCAGAAATGCAAAAGCCTGGAAAGTCATCTCAAATGTTAGGTTCTACAATAGTCAAGTTATTTATAGTAATTGGGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 90 bp TGGCATTACACAAGTCATGCAGTCTGCTCACTTAACCGAGATCAATaGATTAGGTCTAATTTGCTCCTTTTACTAATAAAGTTAACTTGT +
Preference number: 1 (lower is better)
Translates to: WHYTSHAVCSLNRDQ*IRSNLLLLLIKLTC
Trigger: ACAAGTTAACTTTATTAGTAAAAGGAGCAAATTAGACCTAATTCATTGATCTCGGTTAAGTGAGCAGACTGCATGACTTGTGTAATGCCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR-3UTR GCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGCCAGAAGGCAGGGGTTaGAGTGAGCCGAGGTCGCCC +
Preference number: 2 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMPEGRG*SEPRSP
Trigger: GGGCGACCTCGGCTCACTGCAACCCCTGCCTTCTGG...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp GATGGCGGGAATCCTCCCCACCCAATGCCACAGGAGGGCTCCAACTaGGGCTGGGTGTGTTTTTCTCCAGGAAGAGCTGCCTCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: DGGNPPHPMPQEGSN*GWVCFSPGRAASPV
Trigger: GACAGGAGAGGCAGCTCTTCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTGTGGCATTGGGTGGGGAGGATTCCCGCCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAGGGCTGGCACAGCTCTaGTGCATGGGCAGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAGLAQL*CMGRRG
Trigger: CCCTCTCCTGCCCATGCACCAGAGCTGTGCCAGCCC...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGCTAGGGGTCACAGATTaGGCTCCCCAGGAAGTGGAC +
Preference number: 2 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMLGVTD*APQEVD
Trigger: GTCCACTTCCTGGGGAGCCCAATCTGTGACCCCTAG...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp TGCAGAGCACACAGGCATTCTCCCAGCCAGGTTTCCACGTGGACATaGCAGGCAGCGCCCCCTATTCAGCACATGCTGGAGAGCCAAGTG +
Preference number: 2 (lower is better)
Translates to: CRAHRHSPSQVSTWT*QAAPPIQHMLESQV
Trigger: CACTTGGCTCTCCAGCATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGGAGAATGCCTGTGTGCTCTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAGAGAGCACTGCCCCTTaGTGGAGCAATGCCCGCAGC +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAESTAP*WSNARS
Trigger: GCTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTC...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAAGCCAGGTTTCCACGTaGACATTGCAGGCAGCGCCC +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSASQVST*TLQAAP
Trigger: GGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCT...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCAATAAATCATACATGTaGTCCAGATTCCAGGGGACC +
Preference number: 2 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSNKSYM*SRFQGT
Trigger: GGTCCCCTGGAATCTGGATCACATGTATGATTTATT...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCACAACGCAAAGTCGGATaGCACGAGGGGCCAGCTCGA +
Preference number: 2 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAQRKVG*HEGPAR
Trigger: TCGAGCTGGCCCCTCGTGTCATCCGACTTTGCGTTG...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAAGTCTCACAAACTCCTaGGCTCAAGCAATCTGCCCG +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSASLTNS*AQAICP
Trigger: CGGGCAGATTGCTTGAGCTCAGGAGTTTGTGAGACT...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGACTGGCCTCCTGCATaGCACTGTCCACGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWDWPPA*HCPRSS
Trigger: GGAGGAGCGTGGACAGTGGCATGCAGGAGGCCAGTC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAAGAGGACAGGGACACTaGGAGCACGGACTGCTCGGA +
Preference number: 2 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQARGQGH*EHGLLG
Trigger: TCCGAGCAGTCCGTGCTCCCAGTGTCCCTGTCCTCT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCATCTGGCCAAGTCTCCTaGCGCATCTTGTCATCTTGG +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSASGQVS*RILSSW
Trigger: CCAAGATGACAAGATGCGCCAGGAGACTTGGCCAGA...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGCCTCCCGAGTAGCTaGGACTGCAGGCACCCACCA +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWSLPSS*DCRHPP
Trigger: TGGTGGGTGCCTGCAGTCCCAGCTACTCGGGAGGCT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACGAAGGCTGCCAATCATaGGCAGACCCCATCAGCCCA +
Preference number: 2 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHEGCQS*ADPISP
Trigger: TGGGCTGATGGGGTCTGCCCATGATTGGCAGCCTTC...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGGATGGGGCCACCTCTaGATCTGCAGGTGGAGTGGA +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWGWGHL*ICRWSG
Trigger: TCCACTCCACCTGCAGATGCAGAGGTGGCCCCATCC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCATGGCACATCACAGGATaGGGCCACCTCTGCATCTGC +
Preference number: 2 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAWHITG*GHLCIC
Trigger: GCAGATGCAGAGGTGGCCCCATCCTGTGATGTGCCA...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGGGCTCCCCAGGAAGTaGACTCTGACCCCCAGAGAT +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWGLPRK*TLTPRD
Trigger: ATCTCTGGGGGTCAGAGTCCACTTCCTGGGGAGCCC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp CTTCTGTCTGCCACTCTCATTCACCCGGTGCACACCCAGGTTTCCTaGAACCTGAGGACACTTTTCCAATCTGACTTCCTCGGGGAAACT +
Preference number: 2 (lower is better)
Translates to: LLSATLIHPVHTQVS*NLRTLFQSDFLGET
Trigger: AGTTTCCCCGAGGAAGTCAGATTGGAAAAGTGTCCTCAGGTTCAAGGAAACCTGGGTGTGCACCGGGTGAATGAGAGTGGCAGACAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACCCCCTATTCAGCACATaGTGGAGAGCCAAGTGCTTC +
Preference number: 2 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHPLFST*WRAKCF
Trigger: GAAGCACTTGGCTCTCCAGCATGTGCTGAATAGGGG...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCAGAGCTGAAGGAGACTaGGATAGCAGCTCACAGACG +
Preference number: 2 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLARAEGD*DSSSQT
Trigger: CGTCTGTGAGCTGCTATCTCAGTCTCCTTCAGCTCT...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGTGCGTAACAGAAAAGTaGCAAATTTCAGTTGCTACT +
Preference number: 2 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMCVTEK*QISVAT
Trigger: AGTAGCAACTGAAATTTGTCACTTTTCTGTTACGCA...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCTATGAAATGAGAAACTaGCATTACACAAGTCATGCA +
Preference number: 2 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSYEMRN*HYTSHA
Trigger: TGCATGACTTGTGTAATGCCAGTTTCTCATTTCATA...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCGGACAGGGAGGAGAATaGACATCTCCCTTAGGTCTG +
Preference number: 2 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLAGQGGE*TSPLGL
Trigger: CAGACCTAAGGGAGATGTCCATTCTCCTCCCTGTCC...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACCCGTATTGCCCAGAATaGTCTCAAACTCCTGAGCTC +
Preference number: 2 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHPYCPE*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCATTCTGGGCAATACGG...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACTTACAGCCCCAAAGATaGCAAGCTCATACTAGGGGA +
Preference number: 2 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHLQPQR*QAHTRG
Trigger: TCCCCTAGTATGAGCTTGGCATCTTTGGGGCTGTAA...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTACGGCAGGGAGAGCACTaGCCCTTGGTGGAGCAATGC +
Preference number: 2 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLRQGEH*PLVEQC
Trigger: GCATTGCTCCACCAAGGGGCAGTGCTCTCCCTGCCG...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGGAGGGCTCCAACTTaGGCTGGGTGTGTTTTTCTC +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWRRAPT*AGCVFL
Trigger: GAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAAACCGCAGAATGACTaGCCTCCTGCATGCCACTGT +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWKPQND*PPACHC
Trigger: ACAGTGGCATGCAGGAGGCCAGTCATTCTGCGGTTT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp ATAAATTTCACATTCAAAAACGCTGTCCCTCCTACCTCAGAGGCCTaGCTGTTTCCTTCTGTCTGCCACTCTCATTCACCCGGTGCACAC +
Preference number: 2 (lower is better)
Translates to: INFTFKNAVPPTSEA*LFPSVCHSHSPGAH
Trigger: GTGTGCACCGGGTGAATGAGAGTGGCAGACAGAAGGAAACAGCAAGGCCTCTGAGGTAGGAGGGACAGCGTTTTTGAATGTGAAATTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGACCACGCCTGGCCAATaGCCCATTTTCAATGATGGA +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWTTPGQ*PIFNDG
Trigger: TCCATCATTGAAAATGGGGCATTGGCCAGGCGTGGT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAAAGACCAGAAATCCATaGTTTCTGATTCTGTGTCTC +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAKTRNP*FLILCL
Trigger: GAGACACAGAATCAGAAACCATGGATTTCTGGTCTT...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCATATAACTGCCTGGCATaGCTTTTTGATACATCTGTG +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAYNCLA*LFDTSV
Trigger: CACAGATGTATCAAAAAGCCATGCCAGGCAGTTATA...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAGGTAGGGATATAAAATaGTGCAGCTGCTTTGGAAAA +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAGRDIK*CSCFGK
Trigger: TTTTCCAAAGCAGCTGCACCATTTTATATCCCTACC...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp ATGACTTTCCAGGCTTTTGCATTTCTGACAACCAGATGGCCCTACTaGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGC +
Preference number: 2 (lower is better)
Translates to: MTFQAFAFLTTRWPY*NLYLLNSWLNWSSG
Trigger: GCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGTCAGAAATGCAAAAGCCTGGAAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCACTTAACCGAGATCAATaGATTAGGTCTAATTTGCTC +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSALNRDQ*IRSNLL
Trigger: GAGCAAATTAGACCTAATTCATTGATCTCGGTTAAG...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACAATAAACCAGCTTCATaGAGTTCTAGGGGAAGGACA +
Preference number: 2 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHNKPAS*SSRGRT
Trigger: TGTCCTTCCCCTAGAACTGCATGAAGCTGGTTTATT...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTACTTGGGAAGCCGGTCTaGTGTGCAGAGGGCAAACCT +
Preference number: 2 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLLGKPV*CAEGKP
Trigger: AGGTTTGCCCTCTGCACACCAGACCGGCTTCCCAAG...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCCCCTCCTGTCTAGGGTaGCCTGTGCTCCTCCCTCGT +
Preference number: 2 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVPSCLG*PVLLPR
Trigger: ACGAGGGAGGAGCACAGGCCACCCTAGACAGGAGGG...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAGGTCAATCCCTACAATaGAGTATTGTTAGGAAACAA +
Preference number: 2 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAGQSLQ*SIVRKQ
Trigger: TTGTTTCCTAACAATACTCCATTGTAGGGATTGACC...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp ACCAGCAGCCACACACACAAAGGGTTGCGCGATCCTACGGCTTTATaGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTT +
Preference number: 2 (lower is better)
Translates to: TSSHTHKGLRDPTAL*TPFIMLLTLMFSWV
Trigger: AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGTGGCTGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR-3UTR TCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACGAAATCCATGGTTTCTaGTTCTGTGTCTCATGTTCT +
Preference number: 2 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHEIHGF*FCVSCS
Trigger: AGAACATGAGACACAGAATCAGAAACCATGGATTTC...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAGATTACATCTGCACGTaGTGCTGTTTACTAAGACAT +
Preference number: 2 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQADYICT*CCLLRH
Trigger: ATGTCTTAGTAAACAGCACCACGTGCAGATGTAATC...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp CCATCAGCCCATCAGTTTTTCAGGTCCCAATGTTCAAATTTCGCATaGAACATCCCCTCTCTGAAGAAGGTTTGCTCACACCTTTACATC +
Preference number: 2 (lower is better)
Translates to: PSAHQFFRSQCSNFA*NIPSLKKVCSHLYI
Trigger: GATGTAAAGGTGTGAGCAAACCTTCTTCAGAGAGGGGATGTTCAATGCGAAATTTGAACATTGGGACCTGAAAAACTGATGGGCTGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGCCATCAACCAATGAATaGATAAAGTGTGGTCAATCC +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWPSTNE*IKCGQS
Trigger: GGATTGACCACACTTTATCCATTCATTGGTTGATGG...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAAGGCTTTTGCATTTCTaGCAACCAGATGGCCCTACT +
Preference number: 2 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLRLLHF*QPDGPT
Trigger: AGTAGGGCCATCTGGTTGTCAGAAATGCAAAAGCCT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAAGAGCTGAAGGAGACTaGGATAGCAGCTCACAGACG +
Preference number: 2 (lower is better)
Translates to: HILLCFQIISLKPSSYQIRAEGD*DSSSQT
Trigger: CGTCTGTGAGCTGCTATCTCAGTCTCCTTCAGCTCT...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTATCAAAATATACTATaGTGGGTAAGCTCTGATTCC +
Preference number: 2 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWYQNIL*WVSSDS
Trigger: GGAATCAGAGCTTACCCACCATAGTATATTTTGATA...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp AAGCATGAGGCAGGGACTAATGGCATCTACACAACTGCCCACAGGTaGTTATCCAACATAAAGTATAAAAGCACAACCGAATATCAACAA +
Preference number: 2 (lower is better)
Translates to: KHEAGTNGIYTTAHR*LSNIKYKSTTEYQQ
Trigger: TTGTTGATATTCGGTTGTGCTTTTATACTTTATGTTGGATAACAACCTGTGGGCAGTTGTGTAGATGCCATTAGTCCCTGCCTCATGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 90 bp TCTGTCTTTCATGACATACATTCACTTTCCTTAAATGTCAGATGCTaGTTGAACGTGTGGAACTCTGAACGCAGCATTAGGACAACTCAC +
Preference number: 2 (lower is better)
Translates to: SVFHDIHSLSLNVRC*LNVWNSERSIRTTH
Trigger: GTGAGTTGTCCTAATGCTGCGTTCAGAGTTCCACACGTTCAACAAGCATCTGACATTTAAGGAAAGTGAATGTATGTCATGAAAGACAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR TCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAATTCAGCCCTGCTACTaGATTATCTTAGGCCAACAA +
Preference number: 2 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLIQPCY*IILGQQ
Trigger: TTGTTGGCCTAAGATAATTCAGTAGCAGGGCTGAAT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCGAAATCAACGCCTGCTaGAAGCTAGAATTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVEINAC*KLELQE
Trigger: CTCTTGCAATTCTAGCTTCCAGCAGGCGTTGATTTC...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR GCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAAGGGATATAAAATGGTaGAGCTGCTTTGGAAAACAA +
Preference number: 2 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLRDIKW*SCFGKQ
Trigger: TTGTTTTCCAAAGCAGCTGCACCATTTTATATCCCT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAGTATATCCAATAGTCTaGCAACTTACAAAACATGCC +
Preference number: 2 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLVYPIV*QLTKHA
Trigger: GGCATGTTTTGTAAGTTGCCAGACTATTGGATATAC...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGTGTAATCCCAGCACTTaGGGAGGCTGGGCCGCGGGG +
Preference number: 3 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMCNPST*GGWAAG
Trigger: CCCCGCGGCCCAGCCTCCCAAAGTGCTGGGATTACA...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CGTTGGATGGAGCCCCCTGAGAGGGCCTGGCCTTGGTaGCATAGGTCTCTACAGTGGAGGCCATCCCTGGAG +
Preference number: 3 (lower is better)
Translates to: RWMEPPERAWPW*HRSLQWRPSLE
Trigger: CTCCAGGGATGGCCTCCACTGTAGAGACCTATGTCACCAAGGCCAGGCCCTCTCAGGGGGCTCCATCCAACG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CTCTCAGGGAGCTCTGGAGCCAGAATGGACTCAGGCTaGGAGGGCCGGGCCTCTTACCCTGAGGCAGAATGG +
Preference number: 3 (lower is better)
Translates to: LSGSSGARMDSG*EGRASYPEAEW
Trigger: CCATTCTGCCTCAGGGTAAGAGGCCCGGCCCTCTCAGCCTGAGTCCATTCTGGCTCCAGAGCTCCCTGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CCCCTCCTGTCTAGGGTGGCCTGTGCTCCTCCCTCGTaGTTCTATGAAGGCTGCCAATCATGGGCAGACCCC +
Preference number: 3 (lower is better)
Translates to: PLLSRVACAPPS*FYEGCQSWADP
Trigger: GGGGTCTGCCCATGATTGGCAGCCTTCATAGAATCACGAGGGAGGAGCACAGGCCACCCTAGACAGGAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp CGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATaGTGGAGAGCCAAGTGCTTCCATGGTCCCCACTCC +
Preference number: 3 (lower is better)
Translates to: RGHCRQRPLFST*WRAKCFHGPHS
Trigger: GGAGTGGGGACCATGGAAGCACTTGGCTCTCCAGCATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp CCAACACTTACCGGCAGGGAGAGCACTGCCCCTTGGTaGAGCAATGCCCGCAGCAGGGATGAACCCATGAGA +
Preference number: 3 (lower is better)
Translates to: PTLTGRESTAPW*SNARSRDEPMR
Trigger: TCTCATGGGTTCATCCCTGCTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTCCCTGCCGGTAAGTGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp GTTCCAACACTTACCGGCAGGGAGAGCACTGCCCCTTaGTGGAGCAATGCCCGCAGCAGGGATGAACCCATG +
Preference number: 3 (lower is better)
Translates to: VPTLTGRESTAP*WSNARSRDEPM
Trigger: CATGGGTTCATCCCTGCTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTCCCTGCCGGTAAGTGTTGGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp ACGTTTCTGCAGGCAGGGCCACAACGCAAAGTCGGATaGCACGAGGGGCCAGCTCGACCTTACCTTGTTCGG +
Preference number: 3 (lower is better)
Translates to: TFLQAGPQRKVG*HEGPARPYLVR
Trigger: CCGAACAAGGTAAGGTCGAGCTGGCCCCTCGTGTCATCCGACTTTGCGTTGTGGCCCTGCCTGCAGAAACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CTTGGTGGAGCAATGCCCGCAGCAGGGATGAACCCATaGGAGCTGCTAGAAAAGGCCTGGCACTGGGGCAGT +
Preference number: 3 (lower is better)
Translates to: LGGAMPAAGMNP*ELLEKAWHWGS
Trigger: ACTGCCCCAGTGCCAGGCCTTTTCTAGCAGCTCTCATGGGTTCATCCCTGCTGCGGGCATTGCTCCACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp TCCTTCAGAGGCCCTGCTCCAGCTGAGCTTGGTGGGTaGGGCAAATTCACAGGACGGCCTTCTCCTGAACCA +
Preference number: 3 (lower is better)
Translates to: SFRGPAPAELGG*GKFTGRPSPEP
Trigger: TGGTTCAGGAGAAGGCCGTCCTGTGAATTTGCCCCACCCACCAAGCTCAGCTGGAGCAGGGCCTCTGAAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp CCCCACCCAATGCCACAGGAGGGCTCCAACTTGGGCTaGGTGTGTTTTTCTCCAGGAAGAGCTGCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: PHPMPQEGSNLG*VCFSPGRAASP
Trigger: AGGAGAGGCAGCTCTTCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTGTGGCATTGGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp CTCCTCTTCCCCGGTTCTTGGGAAGCCGGTCTGGTGTaGAGAGGGCAAACCTTGCCCAGTGCTGCTGTTAAA +
Preference number: 3 (lower is better)
Translates to: LLFPGSWEAGLV*RGQTLPSAAVK
Trigger: TTTAACAGCAGCACTGGGCAAGGTTTGCCCTCTGCACACCAGACCGGCTTCCCAAGAACCGGGGAAGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp CTCCAGCTAAAACCGCAGAATGACTGGCCTCCTGCATaGCACTGTCCACGCTCCTCCATGCAGTACCTCCTG +
Preference number: 3 (lower is better)
Translates to: LQLKPQNDWPPA*HCPRSSMQYLL
Trigger: CAGGAGGTACTGCATGGAGGAGCGTGGACAGTGGCATGCAGGAGGCCAGTCATTCTGCGGTTTTAGCTGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp ACAGGCATTCTCCCAGCCAGGTTTCCACGTGGACATTaGAGGCAGCGCCCCCTATTCAGCACATGCTGGAGA +
Preference number: 3 (lower is better)
Translates to: TGILPARFPRGH*RQRPLFSTCWR
Trigger: TCTCCAGCATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGGAGAATGCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp ATCCTCCCCACCCAATGCCACAGGAGGGCTCCAACTTaGGCTGGGTGTGTTTTTCTCCAGGAAGAGCTGCCT +
Preference number: 3 (lower is better)
Translates to: ILPTQCHRRAPT*AGCVFLQEELP
Trigger: AGGCAGCTCTTCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTGTGGCATTGGGTGGGGAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp AGAGCACACAGGCATTCTCCCAGCCAGGTTTCCACGTaGACATTGCAGGCAGCGCCCCCTATTCAGCACATG +
Preference number: 3 (lower is better)
Translates to: RAHRHSPSQVST*TLQAAPPIQHM
Trigger: CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGGAGAATGCCTGTGTGCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp CTGCAAACTCTGACTCCAGGGTTCAAGCAATTCCCCTaGCTCAGCCTCCCAAGTAGATGGGACTATAGGCGG +
Preference number: 3 (lower is better)
Translates to: LQTLTPGFKQFP*LSLPSRWDYRR
Trigger: CCGCCTATAGTCCCATCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAACCCTGGAGTCAGAGTTTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp TCTGAAGAGACAGGAAGTGGTTGCCAGACAGGGAGCTaGGAGGAATGGCGGAGCATAGGGAGTTACTGCCAA +
Preference number: 3 (lower is better)
Translates to: SEETGSGCQTGS*EEWRSIGSYCQ
Trigger: TTGGCAGTAACTCCCTATGCTCCGCCATTCCTCTCAGCTCCCTGTCTGGCAACCACTTCCTGTCTCTTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp CCAAAAACAAACCTCCAGCTAAAACCGCAGAATGACTaGCCTCCTGCATGCCACTGTCCACGCTCCTCCATG +
Preference number: 3 (lower is better)
Translates to: PKTNLQLKPQND*PPACHCPRSSM
Trigger: CATGGAGGAGCGTGGACAGTGGCATGCAGGAGGCCAGTCATTCTGCGGTTTTAGCTGGAGGTTTGTTTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp AGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTaGCTCAACTGGTCCTCTGGCCCCCACCCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: RWPYLNLYLLNS*LNWSSGPHPEA
Trigger: AGCTTCTGGGTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp GGACATTCCAGACAAGGAGGGGCAAATATCACACCTTaGGACAGGAAGGGCTTTGGCAAGCTCAGGTGCAGA +
Preference number: 3 (lower is better)
Translates to: GHSRQGGANITP*DRKGFGKLRCR
Trigger: TCTGCACCTGAGCTTGCCAAAGCCCTTCCTGTCTCAAGGTGTGATATTTGCCCCTCCTTGTCTGGAATGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp ACTACCAAAAACAAACCTCCAGCTAAAACCGCAGAATaGCTGGCCTCCTGCATGCCACTGTCCACGCTCCTC +
Preference number: 3 (lower is better)
Translates to: TTKNKPPAKTAE*LASCMPLSTLL
Trigger: GAGGAGCGTGGACAGTGGCATGCAGGAGGCCAGTCATTCTGCGGTTTTAGCTGGAGGTTTGTTTTTGGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTCACACACACAAAGGGTaGCGCGATCCTACGGCTTTA +
Preference number: 3 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIHTHKG*RDPTAL
Trigger: TAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGTG...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACCACACCCAGGTTTCCTaGAACCTGAGGACACTTTTC +
Preference number: 3 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHHTQVS*NLRTLF
Trigger: GAAAAGTGTCCTCAGGTTCAAGGAAACCTGGGTGTG...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGCATCACTCAGCCAAGTaGCCCATCCAGGCTTCTAGC +
Preference number: 3 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWHHSAK*PIQASS
Trigger: GCTAGAAGCCTGGATGGGCAACTTGGCTGAGTGATG...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CCAGGTTTCCTTGAACCTGAGGACACTTTTCCAATCTaGCTTCCTCGGGGAAACTTTGTCAGCCTGGAGGTC +
Preference number: 3 (lower is better)
Translates to: PGFLEPEDTFPI*LPRGNFVSLEV
Trigger: GACCTCCAGGCTGACAAAGTTTCCCCGAGGAAGTCAGATTGGAAAAGTGTCCTCAGGTTCAAGGAAACCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp AGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTaGGTGCAAGCAGGGGAAATGCCAGATGCTTATAAA +
Preference number: 3 (lower is better)
Translates to: SKAPSSQCGRTA*VQAGEMPDAYK
Trigger: TTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp ATCGAGAAGTTCTGCCGCCAGTATAGGGTCACTTGGTaGAAGGCAAGGGATGTCCTCCAGGATACACTGTTC +
Preference number: 3 (lower is better)
Translates to: IEKFCRQYRVTW*KARDVLQDTLF
Trigger: GAACAGTGTATCCTGGAGGACATCCCTTGCCTTTCACCAAGTGACCCTATACTGGCGGCAGAACTTCTCGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp TCTGAACGCAGCATTAGGACAACTCACAAAGGTAGCTaGCCTGGATTTCCTCCCCAAACACGTCCCTTCCTA +
Preference number: 3 (lower is better)
Translates to: SERSIRTTHKGS*PGFPPQTRPFL
Trigger: TAGGAAGGGACGTGTTTGGGGAGGAAATCCAGGGCAGCTACCTTTGTGAGTTGTCCTAATGCTGCGTTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp CATGTCAGTGCTCAAGCCTGTTTACAGCCCCAAAGATaGCAAGCTCATACTAGGGGACAAATGTTGTGCCAG +
Preference number: 3 (lower is better)
Translates to: HVSAQACLQPQR*QAHTRGQMLCQ
Trigger: CTGGCACAACATTTGTCCCCTAGTATGAGCTTGGCATCTTTGGGGCTGTAAACAGGCTTGAGCACTGACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp AGTGTGGCAGGACAGCCTGAGTGCAAGCAGGGGAAATaGCAGATGCTTATAAAACCATCAGACCTTGTGAGA +
Preference number: 3 (lower is better)
Translates to: SVAGQPECKQGK*QMLIKPSDLVR
Trigger: TCTCACAAGGTCTGATGGTTTTATAAGCATCTGGCATTTCCCCTGCTTGCACTCAGGCTGTCCTGCCACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp CACACTGGGGGACTGCAACAAGATTACATCTGCACGTaGTGCTGTTTACTAAGACATGAAGAGCTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: HTGGLQQDYICT*CCLLRHEELKE
Trigger: CTCCTTCAGCTCTTCATGTCTTAGTAAACAGCACCACGTGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR-3UTR CAA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAATTTACCAAGTCATTTaGCCAACTATGTGTAGAACC +
Preference number: 3 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAIYQVI*PTMCRT
Trigger: GGTTCTACACATAGTTGGCAAAATGACTTGGTAAAT...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGTCAAGATGAGATTTaGAGTGGGGACACAGCGAAG +
Preference number: 3 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWSQDEI*SGDTAK
Trigger: CTTCGCTGTGTCCCCACTCAAAATCTCATCTTGACT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAGCGCATCTTGTCATCTaGGTCTTCTTGCTAAACATA +
Preference number: 3 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAAHLVI*VFLLNI
Trigger: TATGTTTAGCAAGAAGACCAAGATGACAAGATGCGC...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp ATTCCGTTTATATGTAATGTCCAGAAGAGGCAACTCTaGAGAGACAGGAAGTGGTTGCCAGACAGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: IPFICNVQKRQL*RDRKWLPDREL
Trigger: CAGCTCCCTGTCTGGCAACCACTTCCTGTCTCTTCAGAGTTGCCTCTTCTGGACATTACATATAAACGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp ACTGGGGGACTGCAACAAGATTACATCTGCACGTGGTaGTGTTTACTAAGACATGAAGAGCTGAAGGAGACT +
Preference number: 3 (lower is better)
Translates to: TGGLQQDYICTW*CLLRHEELKET
Trigger: AGTCTCCTTCAGCTCTTCATGTCTTAGTAAACAGCACCACGTGCAGATGTAATCTTGTTGCAGTCCCCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR GCA 72 bp AATTTCGCATTGAACATCCCCTCTCTGAAGAAGGTTTaGTCACACCTTTACATCCCCATGCAGAGCACACAG +
Preference number: 3 (lower is better)
Translates to: NFALNIPSLKKV*SHLYIPMQSTQ
Trigger: CTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGAGGGGATGTTCAATGCGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp CAGAGATTGAGTTTCCTGCCAGGAGTTTATCAAAAGTaGCCCAGAAATCAACGCCTGCTGGAAGCTAGAATT +
Preference number: 3 (lower is better)
Translates to: QRLSFLPGVYQK*PRNQRLLEARI
Trigger: AATTCTAGCTTCCAGCAGGCGTTGATTTCTGGGGCACTTTTGATAAACTCCTGGCAGGAAACTCAATCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp ATATTAAATAACTTGCCCAACATCACTCAGCCAAGTTaGCCATCCAGGCTTCTAGCCACTGTAGTGGAGTTG +
Preference number: 3 (lower is better)
Translates to: ILNNLPNITQPS*PSRLLATVVEL
Trigger: CAACTCCACTACAGTGGCTAGAAGCCTGGATGGGCAACTTGGCTGAGTGATGTTGGGCAAGTTATTTAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CCCATCCAGGCTTCTAGCCACTGTAGTGGAGTTGCATaGTTTACATTCAATTACTCTGCTTTTCCGTTTTCC +
Preference number: 3 (lower is better)
Translates to: PIQASSHCSGVA*FTFNYSAFPFS
Trigger: GGAAAACGGAAAAGCAGAGTAATTGAATGTAAATCATGCAACTCCACTACAGTGGCTAGAAGCCTGGATGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp GTGGTAGTGGAGTCAAGACCAGAAATCCATGGTTTCTaGTTCTGTGTCTCATGTTCTTACCACATACCGCTA +
Preference number: 3 (lower is better)
Translates to: VVVESRPEIHGF*FCVSCSYHIPL
Trigger: TAGCGGTATGTGGTAAGAACATGAGACACAGAATCAGAAACCATGGATTTCTGGTCTTGACTCCACTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp AAGGGATGTCCTCCAGGATACACTGTTCTAATAAGATaGAGGGAAGAGGGGGATTTCATCTTCCAAAGAGTT +
Preference number: 3 (lower is better)
Translates to: KGCPPGYTVLIR*REEGDFIFQRV
Trigger: AACTCTTTGGAAGATGAAATCCCCCTCTTCCCTGCATCTTATTAGAACAGTGTATCCTGGAGGACATCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp GGTGGAGTGGACAGAAGAAATCAGCCAACTGCTTGTTaGAATGTACGGAGTGTTAATTTGCATAAGCAGTTC +
Preference number: 3 (lower is better)
Translates to: GGVDRRNQPTAC*NVRSVNLHKQF
Trigger: GAACTGCTTATGCAAATTAACACTCCGTACATTTCAACAAGCAGTTGGCTGATTTCTTCTGTCCACTCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CCA 72 bp TTTAATCTCCAAATTGCCCTTGGTCATTCCTGGGCATaGGCCAAGCTAACTTTGGGACAAACGATTATAGTT +
Preference number: 3 (lower is better)
Translates to: FNLQIALGHSWA*AKLTLGQTIIV
Trigger: AACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGAATGACCAAGGGCAATTTGGAGATTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCCAGCTCGACCTTACCTaGTTCGGGGGTTCATTTTCT +
Preference number: 3 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVQLDLT*FGGSFS
Trigger: AGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTG...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp AAAGAAATGCATTTTATAACAACCACACTGGGGGACTaGAACAAGATTACATCTGCACGTGGTGCTGTTTAC +
Preference number: 3 (lower is better)
Translates to: KEMHFITTTLGD*NKITSARGAVY
Trigger: GTAAACAGCACCACGTGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTGGTTGTTATAAAATGCATTTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGGTCAGTCCTCTGTCCTaGTTAATTAGAATACTTCCT +
Preference number: 3 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLVSPLS*LIRILP
Trigger: AGGAAGTATTCTAATTAACAAGGACAGAGGACTGAC...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
3UTR-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTCAGTCCTCTGTCCTaGTTAATTAGAATACTTCCT +
Preference number: 3 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWVSPLS*LIRILP
Trigger: AGGAAGTATTCTAATTAACAAGGACAGAGGACTGAC...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
3UTR CCA 72 bp CTGGAAGCTTCATGCATTGCTGGTAGGGATATAAAATaGTGCAGCTGCTTTGGAAAACAATTTAGCAATTCT +
Preference number: 3 (lower is better)
Translates to: LEASCIAGRDIK*CSCFGKQFSNS
Trigger: AGAATTGCTAAATTGTTTTCCAAAGCAGCTGCACCATTTTATATCCCTACCAGCAATGCATGAAGCTTCCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp TTTCATGACATACATTCACTTTCCTTAAATGTCAGATaGTTGTTGAACGTGTGGAACTCTGAACGCAGCATT +
Preference number: 3 (lower is better)
Translates to: FHDIHSLSLNVR*LLNVWNSERSI
Trigger: AATGCTGCGTTCAGAGTTCCACACGTTCAACAAGCATCTGACATTTAAGGAAAGTGAATGTATGTCATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR-3UTR CAA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCACAACTGCCCACAGGTaGTTATCCAACATAAAGTAT +
Preference number: 3 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVTTAHR*LSNIKY
Trigger: ATACTTTATGTTGGATAACAACCTGTGGGCAGTTGT...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR TCA 72 bp CCACATATGAGTTTAGAGGCTATTTCACACTTTCAGTaGCTAAGAACATTTAGTGATGTACATGCTCTTTCA +
Preference number: 3 (lower is better)
Translates to: PHMSLEAISHFQ*LRTFSDVHALS
Trigger: TGAAAGAGCATGTACATCACTAAATGTTCTTAGTCACTGAAAGTGTGAAATAGCCTCTAAACTCATATGTGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR GCA 72 bp TCTATAACTGCCTGGCATGGCTTTTTGATACATCTGTaGTACATTAAACAGCAAACGTTCTATATGACTTTT +
Preference number: 3 (lower is better)
Translates to: SITAWHGFLIHL*YIKQQTFYMTF
Trigger: AAAAGTCATATAGAACGTTTGCTGTTTAATGTAGCACAGATGTATCAAAAAGCCATGCCAGGCAGTTATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCACTGGGAGCACGGACTaGTCGGAGGGCAGGGGTGAG +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSTGSTD*SEGRGE
Trigger: CTCACCCCTGCCCTCCGAGCAGTCCGTGCTCCCAGT...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGTCACCCAGGCTGGAGTaGAGGGGCGTGATCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMSPRLE*RGVIWA
Trigger: AGCCCAGATCACGCCCCTGCACTCCAGCCTGGGTGA...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGAGGACGGCCTTCTCCTaGACCAGATCCCCTTCCTGC +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMRTAFS*TRSPSC
Trigger: GCAGGAAGGGGATCTGGTTCAGGAGAAGGCCGTCCT...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGAGAGGACAGGGACACTaGGAGCACGGACTGCTCGGA +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMRGQGH*EHGLLG
Trigger: TCCGAGCAGTCCGTGCTCCCAGTGTCCCTGTCCTCT...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCTTTCCACGTGGACATTaGAGGCAGCGCCCCCTATTC +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSFPRGH*RQRPLF
Trigger: GAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAA...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTGGGCTGGCACAGCTCTaGTGCATGGGCAGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLGLAQL*CMGRRG
Trigger: CCCTCTCCTGCCCATGCACCAGAGCTGTGCCAGCCC...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CACAGGCATTCTCCCAGCCAGGTTTCCACGTGGACATaGCAGGCAGCGCCCCCTATTCAGCACATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HRHSPSQVSTWT*QAAPPIQHMLE
Trigger: CTCCAGCATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGGAGAATGCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCTTCAAGCAATTCCCCTaGCTCAGCCTCCCAAGTAGA +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSFKQFP*LSLPSR
Trigger: TCTACTTGGGAGGCTGAGGCAGGGGAATTGCTTGAA...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGTCTCCAAATTGCCCTTaGTCATTCCTGGGCATGGGC +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMSPNCP*SFLGMG
Trigger: GCCCATGCCCAGGAATGACCAAGGGCAATTTGGAGA...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp AATCCTCCCCACCCAATGCCACAGGAGGGCTCCAACTaGGGCTGGGTGTGTTTTTCTCCAGGAAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: NPPHPMPQEGSN*GWVCFSPGRAA
Trigger: GGCAGCTCTTCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTGTGGCATTGGGTGGGGAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCAATCCGCAACATCACTaGGCTGGGATACAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSNPQHH*AGIQSD
Trigger: ATCTGACTGTATCCCAGCTCAGTGATGTTGCGGATT...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCTTGTCACCAGCCTTCTaGCCGCTTGTCTTCTTCTTA +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSLSPAF*PLVFFL
Trigger: TAAGAAGAAGACAAGCGGGCAGAAGGCTGGTGACAA...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTTTTCCTGCACGTGCCTaGTGCCCCGACAGCACCTCC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIFPARA*CPDSTS
Trigger: GGAGGTGCTGTCGGGGCAGCAGGCACGTGCAGGAAA...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCGGCTCACAGCTCAGATaGCTTAAGTCCAAGATCAAG +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSGSQLR*LKSKIK
Trigger: CTTGATCTTGGACTTAAGCCATCTGAGCTGTGAGCC...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCCCTTTTTCTTTCTGTTaGCAGCGCCTGATCACTTCT +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSPFSFC*QRLITS
Trigger: AGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGG...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTCTCCTGCAATCCTCCTaGCTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKILLQSS*LSLPSS
Trigger: GCTACTCGGGAGGCTGAGGCAGGAGGATTGCAGGAG...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTCTCTTCCCCGGTTCTTaGGAAGCCGGTCTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKILFPGS*EAGLVC
Trigger: GCACACCAGACCGGCTTCCCAAGAACCGGGGAAGAG...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCGAAATCAACGCCTGCTaGAAGCTAGAATTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSEINAC*KLELQE
Trigger: CTCTTGCAATTCTAGCTTCCAGCAGGCGTTGATTTC...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTaGGCTCAACTGGTCCTCTGGCCCCCACCCAGAAGC +
Preference number: 4 (lower is better)
Translates to: QMALLEPVPLEF*AQLVLWPPPRS
Trigger: GCTTCTGGGTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCACTGACCCCCAGAGATTaGGTTTCCTGCCAGGAGTTT +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSALTPRD*VSCQEF
Trigger: AAACTCCTGGCAGGAAACTCAATCTCTGGGGGTCAG...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGCGGCAGGGAGAGCACTaGCCCTTGGTGGAGCAATGC +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWRQGEH*PLVEQC
Trigger: GCATTGCTCCACCAAGGGGCAGTGCTCTCCCTGCCG...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACGGTAAATGCAAGTGGTaGGGCAGGGACAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHGKCKW*GRDREE
Trigger: CTCCTCCCTGTCCCTGCCCCACCACTTGCATTTACC...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAAGGAGGGCTCCAACTTaGGCTGGGTGTGTTTTTCTC +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSARRAPT*AGCVFL
Trigger: GAGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCT...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGCACTGCCCCTTGGTaGAGCAATGCCCGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWSTAPW*SNARSR
Trigger: CCTGCTGCGGGCATTGCTCCACCAAGGGGCAGTGCT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGAGAGCACTGCCCCTTaGTGGAGCAATGCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWESTAP*WSNARS
Trigger: GCTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACTGGCACATCACAGGATaGGGCCACCTCTGCATCTGC +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHWHITG*GHLCIC
Trigger: GCAGATGCAGAGGTGGCCCCATCCTGTGATGTGCCA...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTAGTGGAGGCCATCCCTaGAGAGGCCATGAGAATGCC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKISGGHP*RGHENA
Trigger: GGCATTCTCATGGCCTCTCCAGGGATGGCCTCCACT...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAAGCCAGGTTTCCACGTaGACATTGCAGGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQASQVST*TLQAAP
Trigger: GGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CTGACAACCAGATGGCCCTACTTGAACCTGTACCTCTaGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: LTTRWPYLNLYL*NSWLNWSSGPH
Trigger: GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAAGGCAGAGGTTGCAGTaGGCCGAGCTAGTACCACTG +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQARQRLQ*AELVPL
Trigger: CAGTGGTACTAGCTCGGCTCACTGCAACCTCTGCCT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCATATAGGGTCACTTGGTaGAAGGCAAGGGATGTCCTC +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAYRVTW*KARDVL
Trigger: GAGGACATCCCTTGCCTTTCACCAAGTGACCCTATA...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTCTCCTCGGCCACCACTaGGGCCGCCGTCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPLLGHH*GRRRRH
Trigger: ATGGCGGCGACGGCGGCCGCAGTGGTGGCCGAGGAG...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCTACATCTGCACGTGGTaGTGTTTACTAAGACATGAA +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSYICTW*CLLRHE
Trigger: TTCATGTCTTAGTAAACAGCACCACGTGCAGATGTA...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCAGCCACATCCTGCTATaGTTTCAAATCATTTCACTG +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSSHILL*FQIISL
Trigger: CAGTGAAATGATTTGAAAGCATAGCAGGATGTGGCT...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCGCTGAGCTTGGTGGGTaGGGCAAATTCACAGGACGG +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLAAELGG*GKFTGR
Trigger: CCGTCCTGTGAATTTGCCCCACCCACCAAGCTCAGC...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCGTTTGCAGGAACAAATaGCTTTCTTCATTCTTTCCC +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSVCRNK*LSSFFP
Trigger: GGGAAAGAATGAAGAAAGCCATTTGTTCCTGCAAAC...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACCATAGGTCTCTACAGTaGAGGCCATCCCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHHRSLQ*RPSLER
Trigger: CCTCTCCAGGGATGGCCTCCACTGTAGAGACCTATG...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCAGAATGGTCGTTGGATaGAGCCCCCTGAGAGGGCCT +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLARMVVG*SPLRGP
Trigger: AGGCCCTCTCAGGGGGCTCCATCCAACGACCATTCT...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCACTAGGGGTCACAGATTaGGCTCCCCAGGAAGTGGAC +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQALGVTD*APQEVD
Trigger: GTCCACTTCCTGGGGAGCCCAATCTGTGACCCCTAG...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCGACACATGGAGATTATaGGGATTACAAGTCAAGATG +
Preference number: 4 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSDTWRL*GLQVKM
Trigger: CATCTTGACTTGTAATCCCCATAATCTCCATGTGTC...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp GCCACTCTCATTCACCCGGTGCACACCCAGGTTTCCTaGAACCTGAGGACACTTTTCCAATCTGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: ATLIHPVHTQVS*NLRTLFQSDFL
Trigger: GAGGAAGTCAGATTGGAAAAGTGTCCTCAGGTTCAAGGAAACCTGGGTGTGCACCGGGTGAATGAGAGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACTGTGCTCCTCCCTCGTaGTTCTATGAAGGCTGCCAA +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHCAPPS*FYEGCQ
Trigger: TTGGCAGCCTTCATAGAATCACGAGGGAGGAGCACA...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCTCCTCGGCCACCACTaGGGCCGCCGTCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNLLGHH*GRRRRH
Trigger: ATGGCGGCGACGGCGGCCGCAGTGGTGGCCGAGGAG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTGCCAGACTTCCTGCTTaGTTCCTAGGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIARLPA*FLGSFL
Trigger: GAGGAAGGAACCTAGGAAGCAAGCAGGAAGTCTGGC...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACCGAGGCCAGACTTCCTaGTTGCTTCCTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHRGQTS*LLPRFL
Trigger: AAGGAACCTAGGAAGCAAGCAGGAAGTCTGGCCTCG...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTCCTTTTTCTTTCTGTTaGCAGCGCCTGATCACTTCT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLPFSFC*QRLITS
Trigger: AGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGG...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTTTTGCTCTTGGGTTCTaGCAAGGAGACACTTGTATC +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLFALGF*QGDTCI
Trigger: GATACAAGTGTCTCCTTGTCAGAACCCAAGAGCAAA...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAGACACTTTTCCAATCTaGCTTCCTCGGGGAAACTTT +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSADTFPI*LPRGNF
Trigger: AAAGTTTCCCCGAGGAAGTCAGATTGGAAAAGTGTC...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGCAGGGATGAACCCATaGGAGCTGCTAGAAAAGGCC +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWAGMNP*ELLEKA
Trigger: GGCCTTTTCTAGCAGCTCTCATGGGTTCATCCCTGC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGATGCTACAACACAGATaGCTCTTGAAAACATTATGC +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMMLQHR*LLKTLC
Trigger: GCATAATGTTTTCAAGAGTCATCTGTGTTGTAGCAT...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTGGAAAACCACCCTCATaGTCCAATTACCTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIGKPPS*SNYLHL
Trigger: CAGGTGGAGGTAATTGGATCATGAGGGTGGTTTTCC...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGTTGTGGAGGCTGATTTaGGTAATAATAAAACTCCAG +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMLWRLI*VIIKLQ
Trigger: CTGGAGTTTTATTATTACTCAAATCAGCCTCCACAA...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCTCCTCGGCCACCACTaGGGCCGCCGTCGCCGCCAT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFLLGHH*GRRRRH
Trigger: ATGGCGGCGACGGCGGCCGCAGTGGTGGCCGAGGAG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCCAGAAGGCAGGGGTTaGAGTGAGCCGAGGTCGCCC +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWPEGRG*SEPRSP
Trigger: GGGCGACCTCGGCTCACTGCAACCCCTGCCTTCTGG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTCCTGCACGTGCCTGCTaGCCCGACAGCACCTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPPARAC*PDSTSL
Trigger: CAGGGAGGTGCTGTCGGGGCAGCAGGCACGTGCAGG...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCCGTTTTCCTGCACGTaGCTGCTGCCCCGACAGCAC +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLPFSCT*LLPRQH
Trigger: GTGCTGTCGGGGCAGCAGGCACGTGCAGGAAAACGG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTAGGGTTTCACCGTATTaGCCAGAATGGTCTCAAACT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLRVSPY*PEWSQT
Trigger: AGTTTGAGACCATTCTGGGCAATACGGTGAAACCCT...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACGATTGGCCTCATCATTaGCCTTCTTGTCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHDWPHH*PSCHQP
Trigger: AGGCTGGTGACAAGAAGGCCAATGATGAGGCCAATC...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCATCTGGCCAAGTCTCCTaGCGCATCTTGTCATCTTGG +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQASGQVS*RILSSW
Trigger: CCAAGATGACAAGATGCGCCAGGAGACTTGGCCAGA...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGGCAGGAGAGGCGCATaGGCAGTAGGGGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPGRRGA*AVGVLG
Trigger: CCCCAGCACCCCTACTGCCCATGCGCCTCTCCTGCC...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGGGTCAATCCCTACAATaGAGTATTGTTAGGAAACAA +
Preference number: 4 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMGQSLQ*SIVRKQ
Trigger: TTGTTTCCTAACAATACTCCATTGTAGGGATTGACC...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAACTCACAGTTCAGCATaGCTGGGGAGGCCTCATGAA +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQATHSSA*LGRPHE
Trigger: TTCATGAGGCCTCCCCAGCCATGCTGAACTGTGAGT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCTCGGAGTTCAGCCTTaGTGCGGTTCAGGACCCCGC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSLGVQP*CGSGPR
Trigger: GCGGGGTCCTGAACCGCATCAAGGCTGAACTCCGAG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTTATCTCACTTTTCTCTaGGCGATGGCTGGTACTATT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLYLTFL*AMAGTI
Trigger: AATAGTACCAGCCATCGCTCAGAGAAAAGTGAGATA...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCGCCTGGCCAACATGGTaGAATCCCGTCTCTACAAAA +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLAAWPTW*NPVSTK
Trigger: TTTTGTAGAGACGGGATTTCACCATGTTGGCCAGGC...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTGATTACAAGTCAAGATaGGATTTTGAGTGGGGACAC +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLDYKSR*DFEWGH
Trigger: GTGTCCCCACTCAAAATCTCATCTTGACTTGTAATC...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTGTTCTCACACTGCTATaGAGAAATAGCCGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIVLTLL*RNSRSL
Trigger: CAAGCTGCGGCTATTTCTTCATAGCAGTGTGAGAAC...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCTGTTCTCCAGCGTCTaGACCAGCAGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSLFSSV*TSRSRS
Trigger: GCTGCGGGACCTGCTGGTGCAGACGCTGGAGAACAG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACACACACACAAAGGGTTaGGCGATCCTACGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHTHTKG*AILRLY
Trigger: ATAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGT...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCCTGTTTCCTTCTGTCTaGCACTCTCATTCACCCGGT +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLALFPSV*HSHSPG
Trigger: ACCGGGTGAATGAGAGTGGCAGACAGAAGGAAACAG...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGACTGGCCTCCTGCATaGCACTGTCCACGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSDWPPA*HCPRSS
Trigger: GGAGGAGCGTGGACAGTGGCATGCAGGAGGCCAGTC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTCATATCATCTTCATCTaGACAAAGGCCAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLHIIFI*TKASFV
Trigger: GACAAAGCTGGCCTTTGTCCAGATGAAGATGATATG...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTTCGACATACACATTTTaGGGGACACATTCAGTCCTT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLSTYTF*GTHSVL
Trigger: AAGGACTGAATGTGTCCCCCAAAATGTGTATGTCGA...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCCCTCCTGTCTAGGGTaGCCTGTGCTCCTCCCTCGT +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSPSCLG*PVLLPR
Trigger: ACGAGGGAGGAGCACAGGCCACCCTAGACAGGAGGG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACTCGGAGTTCAGCCTTaGTGCGGTTCAGGACCCCGC +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSLGVQP*CGSGPR
Trigger: GCGGGGTCCTGAACCGCATCAAGGCTGAACTCCGAG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAACACTTGTATCACTCTaGTTGGCCTCATCATTGGCC +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQATLVSL*LASSLA
Trigger: GGCCAATGATGAGGCCAATCAGAGTGATACAAGTGT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCTCCCGCCAGGGAGCTaGGTCCACTTTTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWLPPGS*VHFLRG
Trigger: CCCCCTTAAAAAGTGGACTCAGCTCCCTGGCGGGAG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTCAGTCAGATCTTGTGTaGGGTCATCAAGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIQSDLV*GHQAYH
Trigger: GTGATAAGCTTGATGACCTCACACAAGATCTGACTG...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAGAAATCCATGGTTTCTaGTTCTGTGTCTCATGTTCT +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAEIHGF*FCVSCS
Trigger: AGAACATGAGACACAGAATCAGAAACCATGGATTTC...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCACTCCTGAGCTCAAATaGTCCTCCTGCATCAGTTTC +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLATPELK*SSCISF
Trigger: GAAACTGATGCAGGAGGATCATTTGAGCTCAGGAGT...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTCTGTTCTCCAGCGTCTaGACCAGCAGGTCCCGCAGC +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPLFSSV*TSRSRS
Trigger: GCTGCGGGACCTGCTGGTGCAGACGCTGGAGAACAG...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAACCACACTGGGGGACTaGAACAAGATTACATCTGCA +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQATTLGD*NKITSA
Trigger: TGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTGGT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGAAGCCGGTCTGGTGTaGAGAGGGCAAACCTTGCCC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSEAGLV*RGQTLP
Trigger: GGGCAAGGTTTGCCCTCTGCACACCAGACCGGCTTC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTCGCTCAGATATGATCTaGCATATATACCTAACCTCT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLRSDMI*HIYLTS
Trigger: AGAGGTTAGGTATATATGGCAGATCATATCTGAGCG...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAGGATGGGGCCACCTCTaGATCTGCAGGTGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLGWGHL*ICRWSG
Trigger: TCCACTCCACCTGCAGATGCAGAGGTGGCCCCATCC...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCCGTCGCCGCCATCTTaGTTCTCCAAGACAACCGCC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSPSPPS*FSKTTA
Trigger: GGCGGTTGTCTTGGAGAAGCAAGATGGCGGCGACGG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGGCTGCTTTTGCTCTTaGGTTCTGACAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWGCFCS*VLTRRH
Trigger: GTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAGGGCTCCCCAGGAAGTaGACTCTGACCCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLGLPRK*TLTPRD
Trigger: ATCTCTGGGGGTCAGAGTCCACTTCCTGGGGAGCCC...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCCTATTCAGCACATGCTaGAGAGCCAAGTGCTTCCAT +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLALFSTC*RAKCFH
Trigger: ATGGAAGCACTTGGCTCTCCAGCATGTGCTGAATAG...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTCCCACCCTTGACACATaGAGATTATGGGGATTACAA +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIPTLDT*RLWGLQ
Trigger: TTGTAATCCCCATAATCTCCATGTGTCAAGGGTGGG...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCATACCTCTTGAATTCTTaGCTCAACTGGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAYLLNS*LNWSSG
Trigger: GCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTA...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTTTGTATCACTCTGATTaGCCTCATCATTGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLLYHSD*PHHWPF
Trigger: AAAAGGCCAATGATGAGGCCAATCAGAGTGATACAA...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS-3UTR TCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACTCCCGCCAGGGAGCTaGGTCCACTTTTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSLPPGS*VHFLRG
Trigger: CCCCCTTAAAAAGTGGACTCAGCTCCCTGGCGGGAG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTTGCGTAACAGAAAAGTaGCAAATTTCAGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLCVTEK*QISVAT
Trigger: AGTAGCAACTGAAATTTGTCACTTTTCTGTTACGCA...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAATGTCAGATGCTTGTTaGACGTGTGGAACTCTGAAC +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAMSDAC*TCGTLN
Trigger: GTTCAGAGTTCCACACGTTCAACAAGCATCTGACAT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCAACGCAAAGTCGGATaGCACGAGGGGCCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVQRKVG*HEGPAR
Trigger: TCGAGCTGGCCCCTCGTGTCATCCGACTTTGCGTTG...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTACTGGTCTCGAACCCCTaGCCTCAAGTGATCTGCTGG +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLLVSNP*PQVICW
Trigger: CCAGCAGATCACTTGAGGTCAGGGGTTCGAGACCAG...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGGCTTTTGCATTTCTaGCAACCAGATGGCCCTACT +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWRLLHF*QPDGPT
Trigger: AGTAGGGCCATCTGGTTGTCAGAAATGCAAAAGCCT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCTGGCATCTACACAACTaGCCACAGGTTGTTATCCAA +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLAWHLHN*PQVVIQ
Trigger: TTGGATAACAACCTGTGGGCAGTTGTGTAGATGCCA...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTTTGGCAAGCTCAGGTaGAGAGGCTGTGCAGCAGTG +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLFGKLR*RGCAAV
Trigger: CACTGCTGCACAGCCTCTGCACCTGAGCTTGCCAAA...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTTACAGCCCCAAAGATaGCAAGCTCATACTAGGGGA +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWLQPQR*QAHTRG
Trigger: TCCCCTAGTATGAGCTTGGCATCTTTGGGGCTGTAA...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCCGAGTAGCTGGGACTaGAGGCACCCACCATCGCAC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNPSSWD*RHPPSH
Trigger: GTGCGATGGTGGGTGCCTGCAGTCCCAGCTACTCGG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGGCCACCTCTGCATCTaGAGGTGGAGTGGACAGAAG +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWGHLCI*RWSGQK
Trigger: CTTCTGTCCACTCCACCTGCAGATGCAGAGGTGGCC...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTATGCTGGAGAGCCAAGTaGTTCCATGGTCCCCACTCC +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLCWRAK*FHGPHS
Trigger: GGAGTGGGGACCATGGAAGCACTTGGCTCTCCAGCA...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTAGCATAGGGAGTTACTaGCAATGGATACAAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKISIGSY*QWIQGF
Trigger: GAAACCTTGTATCCATTGGCAGTAACTCCCTATGCT...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTGACTTTCCAGGCTTTTaGATTTCTGACAACCAGATG +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIDFPGF*ISDNQM
Trigger: CATCTGGTTGTCAGAAATGCAAAAGCCTGGAAAGTC...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACTTGTATCACTCTGATTaGCCTCATCATTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHLYHSD*PHHWPS
Trigger: AGAAGGCCAATGATGAGGCCAATCAGAGTGATACAA...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGTGCAGCAGTGGGCTaGCACAGCTCTGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSCAAVG*HSSGAW
Trigger: CCATGCACCAGAGCTGTGCCAGCCCACTGCTGCACA...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCAGGGGTAAATGCAAGTaGTGGGGCAGGGACAGGGAG +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSRGKCK*WGRDRE
Trigger: CTCCCTGTCCCTGCCCCACCACTTGCATTTACCCCT...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGCTTGGGAAGCCGGTCTaGTGTGCAGAGGGCAAACCT +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMLGKPV*CAEGKP
Trigger: AGGTTTGCCCTCTGCACACCAGACCGGCTTCCCAAG...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAGTAATCCCAGCACTTTaGGAGGCTGGGCCGCGGGGG +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIVIPAL*EAGPRG
Trigger: CCCCCGCGGCCCAGCCTCCCAAAGTGCTGGGATTAC...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCAGCCTCCCGAGTAGCTaGGACTGCAGGCACCCACCA +
Preference number: 4 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVSLPSS*DCRHPP
Trigger: TGGTGGGTGCCTGCAGTCCCAGCTACTCGGGAGGCT...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACTCGGAGTTCAGCCTTaGTGCGGTTCAGGACCCCGC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQILGVQP*CGSGPR
Trigger: GCGGGGTCCTGAACCGCATCAAGGCTGAACTCCGAG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGGCAGGAGAATCACTTaGACCCAGAAGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSGRRIT*TQKAGV
Trigger: AACCCCTGCCTTCTGGGTTCAAGTGATTCTCCTGCC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGCTAAAACCGCAGAATaGCTGGCCTCCTGCATGCCA +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWAKTAE*LASCMP
Trigger: TGGCATGCAGGAGGCCAGTCATTCTGCGGTTTTAGC...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTCACAAACACTGCATATaGATGTGCTTAGCACTGTTA +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIHKHCI*MCLALL
Trigger: TAACAGTGCTAAGCACATTCATATGCAGTGTTTGTG...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCTGGCACAGCTCTGGTaGATGGGCAGGAGAGGGAAG +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNLAQLW*MGRRGK
Trigger: CTTCCCTCTCCTGCCCATGCACCAGAGCTGTGCCAG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCAGGCCCCATGTCAGTaGTCAAGCCTGTTTACAGCC +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWQAPCQ*SSLFTA
Trigger: GGCTGTAAACAGGCTTGAGCACTGACATGGGGCCTG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACAGAGCACACGTTTCTaGAGGCAGGGCCACAACGCA +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSQSTRF*RQGHNA
Trigger: TGCGTTGTGGCCCTGCCTGCAGAAACGTGTGCTCTG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGGGCAGGAGGGGATGTaGAGGATGAAGCATGCTTCA +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSGQEGM*RMKHAS
Trigger: TGAAGCATGCTTCATCCTGCACATCCCCTCCTGCCC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGCAGGACAGCCTGAGTaGAAGCAGGGGAAATGCCAG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPAGQPE*KQGKCQ
Trigger: CTGGCATTTCCCCTGCTTGCACTCAGGCTGTCCTGC...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGTCCGTTCTCACACTaGTATGAAGAAATAGCCGCA +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWSPFSH*YEEIAA
Trigger: TGCGGCTATTTCTTCATAGCAGTGTGAGAACGGACT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCAAAACTCTTTCTCTATTaGAATTTCCCTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAKLFLY*NFPVLI
Trigger: TATGAGGACAGGGAAATTGCAATAGAGAAAGAGTTT...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTTTGTCCTTTATACCTTaGTATCTTACTTGGTGTTGT +
Preference number: 4 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLLSFIP*YLTWCC
Trigger: ACAACACCAAGTAAGATACCAAGGTATAAAGGACAA...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GCAAAGGAGAAGCAAGGCACCTTCTTCACAGTGTGGCAGGACAGCCTGAGTGCATATCAAAATATACTATaGTGGGTAAGCTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: AKEKQGTFFTVWQDSLSAYQNIL*WVSSDS
Trigger: GGAATCAGAGCTTACCCACCATAGTATATTTTGATA...TGCACTCAGGCTGTCCTGCCACACTGTGAAGAAGGTGCCTTGCTTCTCCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGAGGCTGTGCAGCAGTaGGCTGGCACAGCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFEAVQQ*AGTALV
Trigger: CACCAGAGCTGTGCCAGCCCACTGCTGCACAGCCTC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CAGGCTTTTGCATTTCTGACAACCAGATGGCCCTACTaGAACCTGTACCTCTTGAATTCTTGGCTCAACTGG +
Preference number: 4 (lower is better)
Translates to: QAFAFLTTRWPY*NLYLLNSWLNW
Trigger: CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGTCAGAAATGCAAAAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCTCCCGCCAGGGAGCTaGGTCCACTTTTTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFLPPGS*VHFLRG
Trigger: CCCCCTTAAAAAGTGGACTCAGCTCCCTGGCGGGAG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGGCAAATATCACACCTTaGGACAGGAAGGGCTTTGGC +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLANITP*DRKGFG
Trigger: GCCAAAGCCCTTCCTGTCTCAAGGTGTGATATTTGC...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTATCCCTCGTGATTCTATaGAGGCTGCCAATCATGGGC +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLSLVIL*RLPIMG
Trigger: GCCCATGATTGGCAGCCTTCATAGAATCACGAGGGA...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCAGAAGAGGCAACTCTaGAGAGACAGGAAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLQKRQL*RDRKWL
Trigger: CAACCACTTCCTGTCTCTTCAGAGTTGCCTCTTCTG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTACCTGGTCCCACCCTTaGCACATGGAGATTATGGGG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPTWSHP*HMEIMG
Trigger: CCCCATAATCTCCATGTGTCAAGGGTGGGACCAGGT...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAGCTGGGGAGGCCTCATaGAACTTACACTCATGGCAG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSAGEAS*NLHSWQ
Trigger: CTGCCATGAGTGTAAGTTTCATGAGGCCTCCCCAGC...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGCCAGACTTCCTGCTTaGTTCCTAGGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSARLPA*FLGSFL
Trigger: GAGGAAGGAACCTAGGAAGCAAGCAGGAAGTCTGGC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCGAGGCCAGACTTCCTaGTTGCTTCCTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSRGQTS*LLPRFL
Trigger: AAGGAACCTAGGAAGCAAGCAGGAAGTCTGGCCTCG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCCAACAAGATTACATCTaGACGTGGTGCTGTTTACTA +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLAQQDYI*TWCCLL
Trigger: TAGTAAACAGCACCACGTGCAGATGTAATCTTGTTG...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGACCAGATCCCCTTCCTaGAGACTTGAACCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWTRSPS*RLEPRD
Trigger: GTCCCTAGGTTCAAGTCTGCAGGAAGGGGATCTGGT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGGGCTGCTTTTGCTCTTaGGTTCTGACAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLGCFCS*VLTRRH
Trigger: GTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCC...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGGGCTCCAACTTGGGCTaGGTGTGTTTTTCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMGSNLG*VCFSPG
Trigger: TCCTGGAGAAAAACACACCCAGCCCAAGTTGGAGCC...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATGCTCTCAGGGAGCTCTaGAGCCAGAATGGACTCAGG +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNALREL*SQNGLR
Trigger: CCTGAGTCCATTCTGGCTCCAGAGCTCCCTGAGAGC...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCGAAGGCTGCCAATCATaGGCAGACCCCATCAGCCCA +
Preference number: 4 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVEGCQS*ADPISP
Trigger: TGGGCTGATGGGGTCTGCCCATGATTGGCAGCCTTC...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAGGTAGGGATATAAAATaGTGCAGCTGCTTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAGRDIK*CSCFGK
Trigger: TTTTCCAAAGCAGCTGCACCATTTTATATCCCTACC...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCGTATTCGTGATGATGTaGAGAAACTGGAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLAVFVMM*RNWKLH
Trigger: ATGAAGCTTCCAGTTTCTCCACATCATCACGAATAC...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGGTCATTCCTGGGCATaGGCCAAGCTAACTTTGGGA +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSGHSWA*AKLTLG
Trigger: TCCCAAAGTTAGCTTGGCCCATGCCCAGGAATGACC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAACAAAGCCCTTCACTaGAAAGGGATGTGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMNKALH*KGMWWH
Trigger: GTGCCACCACATCCCTTTTCAGTGAAGGGCTTTGTT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCAGGAAGTGGACTCTaGCCCCCAGAGATTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVPGSGL*PPEIEF
Trigger: AAACTCAATCTCTGGGGGTCAGAGTCCACTTCCTGG...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAAGCAAACGTTCTATATaGCTTTTCCATAGGACAATG +
Preference number: 4 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQASKRSI*LFHRTM
Trigger: CATTGTCCTATGGAAAAGTCATATAGAACGTTTGCT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGCGACCTTCGAGACCTTaGAGTGTGCTAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMRPSRP*SVLVSG
Trigger: ACCTGAAACTAGCACACTGCAAGGTCTCGAAGGTCG...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTTTTACCAAGTCATTTTaGCAACTATGTGTAGAACCA +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIFTKSF*QLCVEP
Trigger: TGGTTCTACACATAGTTGGCAAAATGACTTGGTAAA...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACATAAAATGGTGCAGCTaGTTTGGAAAACAATTTAGC +
Preference number: 4 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHIKWCS*FGKQFS
Trigger: GCTAAATTGTTTTCCAAAGCAGCTGCACCATTTTAT...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGACCACGCCTGGCCAATaGCCCATTTTCAATGATGGA +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMTTPGQ*PIFNDG
Trigger: TCCATCATTGAAAATGGGGCATTGGCCAGGCGTGGT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCCAGCTCGACCTTACCTTGTTCGGGGGTTCATTTTCTAAGGGCAGCAAGATTAGGTATCATACAAATTaGCACAGTAAGAGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: GQLDLTLFGGSFSKGSKIRYHTN*HSKSKN
Trigger: ATTCTTGCTCTTACTGTGGCAATTTGTATGATACCT...AATCTTGCTGCCCTTAGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTGGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTAAACCGCAGAATGACTaGCCTCCTGCATGCCACTGT +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPKPQND*PPACHC
Trigger: ACAGTGGCATGCAGGAGGCCAGTCATTCTGCGGTTT...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCACTGCACTCCAGCCTaGGCGACAGTGACTCAGTCT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFHCTPA*ATVTQS
Trigger: AGACTGAGTCACTGTCGCCCAGGCTGGAGTGCAGTG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGGCACCACAGTCTGTaGTATACTAAGAATTGTTGT +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWRHHSL*YTKNCC
Trigger: ACAACAATTCTTAGTATACCACAGACTGTGGTGCCT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTATAACTGCCTGGCATaGCTTTTTGATACATCTGTG +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWYNCLA*LFDTSV
Trigger: CACAGATGTATCAAAAAGCCATGCCAGGCAGTTATA...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGATTGGCCTCATCATTaGCCTTTTCCCCAGTGGTTG +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSDWPHH*PFPQWL
Trigger: CAACCACTGGGGAAAAGGCCAATGATGAGGCCAATC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000622353.4
3UTR CAA 72 bp CACACACACAAAGGGTTGCGCGATCCTACGGCTTTATaGACACCTTTCATCATGCTCTTAACACTGATGTTT +
Preference number: 4 (lower is better)
Translates to: HTHKGLRDPTAL*TPFIMLLTLMF
Trigger: AAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
3UTR CAA 72 bp AGTTGCCCATCCAGGCTTCTAGCCACTGTAGTGGAGTaGCATGATTTACATTCAATTACTCTGCTTTTCCGT +
Preference number: 4 (lower is better)
Translates to: SCPSRLLATVVE*HDLHSITLLFR
Trigger: ACGGAAAAGCAGAGTAATTGAATGTAAATCATGCAACTCCACTACAGTGGCTAGAAGCCTGGATGGGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCAGTCAGATCTTGTGTaGGGTCATCAAGCTTATCAC +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLQSDLV*GHQAYH
Trigger: GTGATAAGCTTGATGACCTCACACAAGATCTGACTG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR TCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCAGTCTCACAAACTCCTaGGCTCAAGCAATCTGCCCG +
Preference number: 4 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVSLTNS*AQAICP
Trigger: CGGGCAGATTGCTTGAGCTCAGGAGTTTGTGAGACT...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGACTTGGTGTTGTCTGTaGACTTGTTTTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLTWCCL*TCFSLW
Trigger: CCAGAGGGAAAAACAAGTGCACAGACAACACCAAGT...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR GCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAGTGAAGGCTGCTTTTaGTCTTGGGTTCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMSEGCF*SWVLTR
Trigger: CCTTGTCAGAACCCAAGAGCAAAAGCAGCCTTCACT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAAGTGAAGGCTGCTTTTaGTCTTGGGTTCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLSEGCF*SWVLTR
Trigger: CCTTGTCAGAACCCAAGAGCAAAAGCAGCCTTCACT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATGCCAGACTTCCTGCTTaGTTCCTAGGTTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNARLPA*FLGSFL
Trigger: GAGGAAGGAACCTAGGAAGCAAGCAGGAAGTCTGGC...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGACACACACAAAGGGTTaGGCGATCCTACGGCTTTAT +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMTHTKG*AILRLY
Trigger: ATAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCACCACACTGGGGGACTaGAACAAGATTACATCTGCA +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSTTLGD*NKITSA
Trigger: TGCAGATGTAATCTTGTTGCAGTCCCCCAGTGTGGT...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCTCTTCCTTCCTTCCTaGACGCCCTATTTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNLFLPS*TPYFPH
Trigger: GTGAGGGAAATAGGGCGTGCAGGAAGGAAGGAAGAG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGACCTTCCCCAGTGGTTaGCCCTTTTTCTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMTFPSG*PFFFLL
Trigger: CAACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGGCAGGTTCACCATCTaGGAGGGCCTGTTTCCTCAT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFGRFTI*EGLFPH
Trigger: ATGAGGAAACAGGCCCTCCCAGATGGTGAACCTGCC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCATCTGCAGGTGGAGTaGACAGAAGAAATCAGCCAA +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSHLQVE*TEEISQ
Trigger: TTGGCTGATTTCTTCTGTCCACTCCACCTGCAGATG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CCATCCTATGTGGGATTAGGTTTCGACATACACATTTaGGGGGACACATTCAGTCCTTCACAGGTTTTTGTT +
Preference number: 4 (lower is better)
Translates to: PSYVGLGFDIHI*GDTFSPSQVFV
Trigger: AACAAAAACCTGTGAAGGACTGAATGTGTCCCCCAAAATGTGTATGTCGAAACCTAATCCCACATAGGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CATCAGTTTTTCAGGTCCCAATGTTCAAATTTCGCATaGAACATCCCCTCTCTGAAGAAGGTTTGCTCACAC +
Preference number: 4 (lower is better)
Translates to: HQFFRSQCSNFA*NIPSLKKVCSH
Trigger: GTGTGAGCAAACCTTCTTCAGAGAGGGGATGTTCAATGCGAAATTTGAACATTGGGACCTGAAAAACTGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp GCCCTTGGTCATTCCTGGGCATGGGCCAAGCTAACTTaGGGACAAACGATTATAGTTTATAGTTTAGATGAT +
Preference number: 4 (lower is better)
Translates to: ALGHSWAWAKLT*GQTIIVYSLDD
Trigger: ATCATCTAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGAATGACCAAGGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGCCTTTTTCTTTCTGTTaGCAGCGCCTGATCACTTCT +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMPFSFC*QRLITS
Trigger: AGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGG...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGTTTGCTCTTGGGTTCTaGCAAGGAGACACTTGTATC +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWFALGF*QGDTCI
Trigger: GATACAAGTGTCTCCTTGTCAGAACCCAAGAGCAAA...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAAATCCGCAACATCACTaGGCTGGGATACAGTCAGAT +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSNPQHH*AGIQSD
Trigger: ATCTGACTGTATCCCAGCTCAGTGATGTTGCGGATT...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTAGAGCTGAAGGAGACTaGGATAGCAGCTCACAGACG +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFRAEGD*DSSSQT
Trigger: CGTCTGTGAGCTGCTATCTCAGTCTCCTTCAGCTCT...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTACCGTGAGGTTCCTCTaGGTGGTAGTGGAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFTVRFL*VVVESR
Trigger: TCTTGACTCCACTACCACTCAGAGGAACCTCACGGT...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGAGCAGACATTCCAGCTaGGTGATTGTCTTATCACTG +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWSRHSS*VIVLSL
Trigger: CAGTGATAAGACAATCACTCAGCTGGAATGTCTGCT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS-3UTR GCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGACAGTAAGTGAAGGCTaGTTTTGCTCTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMTVSEG*FCSWVL
Trigger: CAGAACCCAAGAGCAAAAGCAGCCTTCACTTACTGT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCGAGGCCAGACTTCCTaGTTGCTTCCTAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFRGQTS*LLPRFL
Trigger: AAGGAACCTAGGAAGCAAGCAGGAAGTCTGGCCTCG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAAGGGGACAAATGTTGTaGCAGGTACACAGCAGTTTA +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLRGQML*QVHSSL
Trigger: TAAACTGCTGTGTACCTGGCACAACATTTGTCCCCT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTAGATTGTTCCAGCTaGCTAGCCAGAAACCACATT +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWVDCSS*LARNHI
Trigger: AATGTGGTTTCTGGCTAGGCAGCTGGAACAATCTAC...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGGAGTTTATCAAAAGTaGCCCAGAAATCAACGCCTG +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWGVYQK*PRNQRL
Trigger: CAGGCGTTGATTTCTGGGGCACTTTTGATAAACTCC...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACCCCTATTCAGCACATaGTGGAGAGCCAAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIPLFST*WRAKCF
Trigger: GAAGCACTTGGCTCTCCAGCATGTGCTGAATAGGGG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGTGCACATAAGACATaGTCCAAATGCAAATCTAAA +
Preference number: 4 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWSAHKT*SKCKSK
Trigger: TTTAGATTTGCATTTGGAGCATGTCTTATGTGCACT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAACCTTCCCCAGTGGTTaGCCCTTTTTCTTTCTGTTG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSTFPSG*PFFFLL
Trigger: CAACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGT...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAGGACAGGGAGGAGAATaGACATCTCCCTTAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIGQGGE*TSPLGL
Trigger: CAGACCTAAGGGAGATGTCCATTCTCCTCCCTGTCC...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp GACATACATTCACTTTCCTTAAATGTCAGATGCTTGTaGAACGTGTGGAACTCTGAACGCAGCATTAGGACA +
Preference number: 4 (lower is better)
Translates to: DIHSLSLNVRCL*NVWNSERSIRT
Trigger: TGTCCTAATGCTGCGTTCAGAGTTCCACACGTTCAACAAGCATCTGACATTTAAGGAAAGTGAATGTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
3UTR CAA 72 bp CATGACATACATTCACTTTCCTTAAATGTCAGATGCTaGTTGAACGTGTGGAACTCTGAACGCAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: HDIHSLSLNVRC*LNVWNSERSIR
Trigger: CCTAATGCTGCGTTCAGAGTTCCACACGTTCAACAAGCATCTGACATTTAAGGAAAGTGAATGTATGTCATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGGTGCTAGTTTCAGGTTaGAAAACAGCCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLVLVSG*KTAKVK
Trigger: CTTTACTTTGGCTGTTTTTCAACCTGAAACTAGCAC...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTCTGTTGACAGCGCCTaGTCACTTCTAATAATAAGG +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSSVDSA*SLLIIR
Trigger: CCTTATTATTAGAAGTGATCAGGCGCTGTCAACAGA...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATACACTTGTATCACTCTaGTTGGCCTCATCATTGGCC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNTLVSL*LASSLA
Trigger: GGCCAATGATGAGGCCAATCAGAGTGATACAAGTGT...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTTTTGCTCTTGGGTTCTaGCAAGGAGACACTTGTATC +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVFALGF*QGDTCI
Trigger: GATACAAGTGTCTCCTTGTCAGAACCCAAGAGCAAA...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCAATAAATCATACATGTaGTCCAGATTCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSNKSYM*SRFQGT
Trigger: GGTCCCCTGGAATCTGGATCACATGTATGATTTATT...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGCAGCCAACTGCTTGTTaGAATGTACGGAGTGTTAAT +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMQPTAC*NVRSVN
Trigger: ATTAACACTCCGTACATTTCAACAAGCAGTTGGCTG...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTATACAGGCACAGGCCATaGTGCCTAGCTAATTTTTAT +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLYRHRP*CLANFY
Trigger: ATAAAAATTAGCTAGGCATCATGGCCTGTGCCTGTA...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGTCAAGATGAGATTTTaGGTGGGGACACAGCGAAGC +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFVKMRF*VGTQRS
Trigger: GCTTCGCTGTGTCCCCACTCAAAATCTCATCTTGAC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCGACCTTCGAGACCTTaGAGTGTGCTAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFRPSRP*SVLVSG
Trigger: ACCTGAAACTAGCACACTGCAAGGTCTCGAAGGTCG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACGACCTTCGAGACCTTaGAGTGTGCTAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIRPSRP*SVLVSG
Trigger: ACCTGAAACTAGCACACTGCAAGGTCTCGAAGGTCG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTACTTGGTGTTGTCTGTaGACTTGTTTTTCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVTWCCL*TCFSLW
Trigger: CCAGAGGGAAAAACAAGTGCACAGACAACACCAAGT...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATAGTGAAGGCTGCTTTTaGTCTTGGGTTCTGACAAGG +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNSEGCF*SWVLTR
Trigger: CCTTGTCAGAACCCAAGAGCAAAAGCAGCCTTCACT...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTACAGTAAGTGAAGGCTaGTTTTGCTCTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPTVSEG*FCSWVL
Trigger: CAGAACCCAAGAGCAAAAGCAGCCTTCACTTACTGT...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAACAGTAAGTGAAGGCTaGTTTTGCTCTTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSTVSEG*FCSWVL
Trigger: CAGAACCCAAGAGCAAAAGCAGCCTTCACTTACTGT...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGAATAAACCAGCTTCATaGAGTTCTAGGGGAAGGACA +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWNKPAS*SSRGRT
Trigger: TGTCCTTCCCCTAGAACTGCATGAAGCTGGTTTATT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCATTGCAAGAGTAACTTaGCAGGCAAGCTCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVIARVT*QASSQG
Trigger: TCCCTGAGAGCTTGCCTGGCAAGTTACTCTTGCAAT...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGTGCACCTTCCCCAGTaGTTGGCCCTTTTTCTTTCT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFVHLPQ*LALFLS
Trigger: AGAAAGAAAAAGGGCCAACCACTGGGGAAGGTGCAC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAGGCTGCTTTTGCTCTTaGGTTCTGACAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIGCFCS*VLTRRH
Trigger: GTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCC...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCATATCATCTTCATCTaGACAAAGGCCAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSHIIFI*TKASFV
Trigger: GACAAAGCTGGCCTTTGTCCAGATGAAGATGATATG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCACCGTAAGTTTTCTCTaGCTTAGGAATGGGATCATC +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSTVSFL*LRNGII
Trigger: GATGATCCCATTCCTAAGCCAGAGAAAACTTACGGT...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGACCGTAAGTTTTCTCTaGCTTAGGAATGGGATCATC +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMTVSFL*LRNGII
Trigger: GATGATCCCATTCCTAAGCCAGAGAAAACTTACGGT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACCGTATTGCCCAGAATaGTCTCAAACTCCTGAGCTC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIPYCPE*SQTPEL
Trigger: GAGCTCAGGAGTTTGAGACCATTCTGGGCAATACGG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTGATTGGCCTCATCATTaGCCTTCTTACTTGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVDWPHH*PSYLVL
Trigger: CAACACCAAGTAAGAAGGCCAATGATGAGGCCAATC...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS-3UTR TCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATCTGTTGACAGCGCCTaGTCACTTCTAATAATAAGG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSSVDSA*SLLIIR
Trigger: CCTTATTATTAGAAGTGATCAGGCGCTGTCAACAGA...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAACACTTGTATCACTCTaGTTGGCCTCATCATTGGCC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQITLVSL*LASSLA
Trigger: GGCCAATGATGAGGCCAATCAGAGTGATACAAGTGT...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTAATAAATCATACATGTaGTCCAGATTCCAGGGGACC +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVNKSYM*SRFQGT
Trigger: GGTCCCCTGGAATCTGGATCACATGTATGATTTATT...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTATTCAGCCCTGCTACTaGATTATCTTAGGCCAACAA +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVIQPCY*IILGQQ
Trigger: TTGTTGGCCTAAGATAATTCAGTAGCAGGGCTGAAT...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAAAGATGCTCATCGTGTaGGTTAAAGCTTGTCTGTTA +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLKMLIV*VKACLL
Trigger: TAACAGACAAGCTTTAACTCACACGATGAGCATCTT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAACAAGTCATGCAGTCTaGTCACTTAACCGAGATCAA +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSTSHAV*SLNRDQ
Trigger: TTGATCTCGGTTAAGTGAGCAGACTGCATGACTTGT...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTACATCTGCACGTGGTaGTGTTTACTAAGACATGAA +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSYICTW*CLLRHE
Trigger: TTCATGTCTTAGTAAACAGCACCACGTGCAGATGTA...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGAGCCACATCCTGCTATaGTTTCAAATCATTTCACTG +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWSHILL*FQIISL
Trigger: CAGTGAAATGATTTGAAAGCATAGCAGGATGTGGCT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAACCTTTACATCCCCATaGAGAGCACACAGGCATTCT +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQITFTSP*RAHRHS
Trigger: AGAATGCCTGTGTGCTCTGCATGGGGATGTAAAGGT...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATTGTATCACTCTGATTaGCCTCATCATTGGCCTTCT +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSLYHSD*PHHWPS
Trigger: AGAAGGCCAATGATGAGGCCAATCAGAGTGATACAA...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCTTTTCTCTGAGCGATaGCTGGTACTATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLLFSER*LVLLKS
Trigger: TGATTTTAATAGTACCAGCCATCGCTCAGAGAAAAG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAAAGACCAGAAATCCATaGTTTCTGATTCTGTGTCTC +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLKTRNP*FLILCL
Trigger: GAGACACAGAATCAGAAACCATGGATTTCTGGTCTT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGTGCTAGTTTCAGGTTaGAAAACAGCCAAAGTAAAG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPVLVSG*KTAKVK
Trigger: CTTTACTTTGGCTGTTTTTCAACCTGAAACTAGCAC...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTGCTTATCACTGGTATTaGTGTCATCTATTTCCACAG +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVAYHWY*CHLFPQ
Trigger: CTGTGGAAATAGATGACATCAATACCAGTGATAAGC...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR TCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAGCTTATCACTGGTATTaGTGTCATCTATTTCCACAG +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSAYHWY*CHLFPQ
Trigger: CTGTGGAAATAGATGACATCAATACCAGTGATAAGC...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR TCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGCGTAACAGAAAAGTaGCAAATTTCAGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSCVTEK*QISVAT
Trigger: AGTAGCAACTGAAATTTGTCACTTTTCTGTTACGCA...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGACATTCATCAGAAACTaGACAATCATCCGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWTFIRN*TIIREV
Trigger: TACTTCTCGGATGATTGTTCAGTTTCTGATGAATGT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR TCA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGTCTTATCACTGGTATTaGTGTCATCTATTTCCACAG +
Preference number: 4 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWSYHWY*CHLFPQ
Trigger: CTGTGGAAATAGATGACATCAATACCAGTGATAAGA...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS-3UTR GCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTTCTCTACTTTTTCTTaGTCCTCTAGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLFSTFS*SSSAKN
Trigger: GTTTTTAGCACTAGAGGAGCAAGAAAAAGTAGAGAA...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCACTCATCTTTATCATaGAGATATCTAAAAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLHSSLS*RYLKAE
Trigger: CTCTGCTTTTAGATATCTGCATGATAAAGATGAGTG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGAGAGGTCACAAGATTTaGAACTTTCCCAATTACTAT +
Preference number: 4 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLRGHKI*NFPNYY
Trigger: ATAGTAATTGGGAAAGTTGCAAATCTTGTGACCTCT...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCACTGTTCTAATAAGATaGAGGGAAGAGGGGGATTTC +
Preference number: 4 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVTVLIR*REEGDF
Trigger: GAAATCCCCCTCTTCCCTGCATCTTATTAGAACAGT...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCCTTGGTATCTTACTTaGTGTTGTCTGTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNPWYLT*CCLCTC
Trigger: ACAAGTGCACAGACAACACCAAGTAAGATACCAAGG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACCATCAACCAATGAATaGATAAAGTGTGGTCAATCC +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSPSTNE*IKCGQS
Trigger: GGATTGACCACACTTTATCCATTCATTGGTTGATGG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCCAAAGAGTTGTCACTaGGAATTTACAAAGGCCCCT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFPKSCH*EFTKAP
Trigger: AGGGGCCTTTGTAAATTCCCAGTGACAACTCTTTGG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATATTGGCCTTCTTACTTaGTGTTGTCTGTGCACTTGT +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNIGLLT*CCLCTC
Trigger: ACAAGTGCACAGACAACACCAAGTAAGAAGGCCAAT...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTTATCTCACTTTTCTCTaGGCGATGGCTGGTACTATT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFYLTFL*AMAGTI
Trigger: AATAGTACCAGCCATCGCTCAGAGAAAAGTGAGATA...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATATATCTCACTTTTCTCTaGGCGATGGCTGGTACTATT +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIYLTFL*AMAGTI
Trigger: AATAGTACCAGCCATCGCTCAGAGAAAAGTGAGATA...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCTGAGAAGGAGATTGTaGGCCATCAAGCATTCATTA +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFLRRRL*AIKHSL
Trigger: TAATGAATGCTTGATGGCTCACAATCTCCTTCTCAG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCCTTCTTCGTGTCTATaGAACATCTTCCAGATAATC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNPSSCL*NIFQII
Trigger: GATTATCTGGAAGATGTTGCATAGACACGAAGAAGG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR GCA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTTACCAAGTCATTTTaGCAACTATGTGTAGAACCA +
Preference number: 4 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSFTKSF*QLCVEP
Trigger: TGGTTCTACACATAGTTGGCAAAATGACTTGGTAAA...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTACAAGTCATGCAGTCTaGTCACTTAACCGAGATCAA +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFTSHAV*SLNRDQ
Trigger: TTGATCTCGGTTAAGTGAGCAGACTGCATGACTTGT...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTAAGACATGCTCCAAATaGAAATCTAAACCACAAGAG +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPKTCSK*KSKPQE
Trigger: CTCTTGTGGTTTAGATTTGCATTTGGAGCATGTCTT...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACATATCATCTTCATCTaGACAAAGGCCAGCTTTGTC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIHIIFI*TKASFV
Trigger: GACAAAGCTGGCCTTTGTCCAGATGAAGATGATATG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTACCGTAAGTTTTCTCTaGCTTAGGAATGGGATCATC +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFTVSFL*LRNGII
Trigger: GATGATCCCATTCCTAAGCCAGAGAAAACTTACGGT...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCTTTTCTCTGAGCGATaGCTGGTACTATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVLFSER*LVLLKS
Trigger: TGATTTTAATAGTACCAGCCATCGCTCAGAGAAAAG...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGTATGAAATGAGAAACTaGCATTACACAAGTCATGCA +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMYEMRN*HYTSHA
Trigger: TGCATGACTTGTGTAATGCCAGTTTCTCATTTCATA...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGATAATTTATAAAGAATaGAAGTGTAGGGCTCACAGC +
Preference number: 4 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMIIYKE*KCRAHS
Trigger: GCTGTGAGCCCTACACTTCCATTCTTTATAAATTAT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGTATATCCAATAGTCTaGCAACTTACAAAACATGCC +
Preference number: 4 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPVYPIV*QLTKHA
Trigger: GGCATGTTTTGTAAGTTGCCAGACTATTGGATATAC...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTAATATCTATAACTGCCTaGCATGGCTTTTTGATACAT +
Preference number: 4 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLISITA*HGFLIH
Trigger: ATGTATCAAAAAGCCATGCCAGGCAGTTATAGATAT...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATAAAACTATGAGTACGTaGAGCCATTTTGAAATCCGC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNKTMST*SHFEIR
Trigger: GCGGATTTCAAAATGGCTCCACGTACTCATAGTTTT...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR GCA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATTCTCTACTTTTTCTTaGTCCTCTAGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSFSTFS*SSSAKN
Trigger: GTTTTTAGCACTAGAGGAGCAAGAAAAAGTAGAGAA...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCCTTCTTCGTGTCTATaGAACATCTTCCAGATAATC +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFPSSCL*NIFQII
Trigger: GATTATCTGGAAGATGTTGCATAGACACGAAGAAGG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR GCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACAACAAGATTACATCTaGACGTGGTGCTGTTTACTA +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIQQDYI*TWCCLL
Trigger: TAGTAAACAGCACCACGTGCAGATGTAATCTTGTTG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATTTTTTACCATGTATTTaGATGGTGTCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNFLPCI*MVSSPS
Trigger: TGAAGGGGAAGACACCATGCAAATACATGGTAAAAA...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
37% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAGATTACATCTGCACGTaGTGCTGTTTACTAAGACAT +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIDYICT*CCLLRH
Trigger: ATGTCTTAGTAAACAGCACCACGTGCAGATGTAATC...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGATTACATCTGCACGTaGTGCTGTTTACTAAGACAT +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFDYICT*CCLLRH
Trigger: ATGTCTTAGTAAACAGCACCACGTGCAGATGTAATC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACTTAACCGAGATCAATaGATTAGGTCTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQILNRDQ*IRSNLL
Trigger: GAGCAAATTAGACCTAATTCATTGATCTCGGTTAAG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR TCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCTTAACCGAGATCAATaGATTAGGTCTAATTTGCTC +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFLNRDQ*IRSNLL
Trigger: GAGCAAATTAGACCTAATTCATTGATCTCGGTTAAG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATTTCTCTACTTTTTCTTaGTCCTCTAGTGCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNFSTFS*SSSAKN
Trigger: GTTTTTAGCACTAGAGGAGCAAGAAAAAGTAGAGAA...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR GCA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATAAGGGATATAAAATGGTaGAGCTGCTTTGGAAAACAA +
Preference number: 4 (lower is better)
Translates to: HILLCFQIISLKPSSYQIRDIKW*SCFGKQ
Trigger: TTGTTTTCCAAAGCAGCTGCACCATTTTATATCCCT...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCTTTTCTCTGAGCGATaGCTGGTACTATTAAAATCA +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFLFSER*LVLLKS
Trigger: TGATTTTAATAGTACCAGCCATCGCTCAGAGAAAAG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CCA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTTATCAAAATATACTATaGTGGGTAAGCTCTGATTCC +
Preference number: 4 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFYQNIL*WVSSDS
Trigger: GGAATCAGAGCTTACCCACCATAGTATATTTTGATA...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS CCA 90 bp CTGCTTTCCCGCCGCGGATCATGCCCGAGCCTGAGGAAGAGACGCTaGGGCCGCACTCCAGGGCCCAGCTGCGGGCCGCCCGTGTGGCCC +
Preference number: 5 (lower is better)
Translates to: LLSRRGSCPSLRKRR*GRTPGPSCGPPVWP
Trigger: GGGCCACACGGGCGGCCCGCAGCTGGGCCCTGGAGTGCGGCCCCAGCGTCTCTTCCTCAGGCTCGGGCATGATCCGCGGCGGGAAAGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS GCA 90 bp ACCCCCAGGCTTCGGCTGGACGCGCTGCTTTCCCGCCGCGGATCATaGCCGAGCCTGAGGAAGAGACGCTGGGGCCGCACTCCAGGGCCC +
Preference number: 5 (lower is better)
Translates to: TPRLRLDALLSRRGS*PSLRKRRWGRTPGP
Trigger: GGGCCCTGGAGTGCGGCCCCAGCGTCTCTTCCTCAGGCTCGGGCATGATCCGCGGCGGGAAAGCAGCGCGTCCAGCCGAAGCCTGGGGGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS TCA 90 bp GTCACCACGCAGGGCCCCTTCTCAGCGCCTGCTCTCCGCTCCACGTaGGGGAAGCAAGGGCAGCGGAGAACGCGTCCCACGCAGTCAAGC +
Preference number: 5 (lower is better)
Translates to: VTTQGPFSAPALRST*GKQGQRRTRPTQSS
Trigger: GCTTGACTGCGTGGGACGCGTTCTCCGCTGCCCTTGCTTCCCTCACGTGGAGCGGAGAGCAGGCGCTGAGAAGGGGCCCTGCGTGGTGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS TCA 90 bp CTCCTCTCTCACCGACCGTGGCTCTCAGCACTCAGGGAGCGCCACTaGGCATGCGTGAGAACAGCCGCCCTCAGCTCGCGGGGGTGTCAG +
Preference number: 5 (lower is better)
Translates to: LLSHRPWLSALRERH*ACVRTAALSSRGCQ
Trigger: CTGACACCCCCGCGAGCTGAGGGCGGCTGTTCTCACGCATGCTCAGTGGCGCTCCCTGAGTGCTGAGAGCCACGGTCGGTGAGAGAGGAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 90 bp GAACTAACCCTAGTGGGTCACCACGCAGGGCCCCTTCTCAGCGCCTaGTCTCCGCTCCACGTGAGGGAAGCAAGGGCAGCGGAGAACGCG +
Preference number: 5 (lower is better)
Translates to: ELTLVGHHAGPLLSA*SPLHVREARAAENA
Trigger: CGCGTTCTCCGCTGCCCTTGCTTCCCTCACGTGGAGCGGAGAGCAGGCGCTGAGAAGGGGCCCTGCGTGGTGACCCACTAGGGTTAGTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 90 bp AGTTCAGCCTTGATGCGGTTCAGGACCCCGCTGTTCTCCAGCGTCTaGACCAGCAGGTCCCGCAGCTCCGTGTCCTCCTCGGCCACCACT +
Preference number: 5 (lower is better)
Translates to: SSALMRFRTPLFSSV*TSRSRSSVSSSATT
Trigger: AGTGGTGGCCGAGGAGGACACGGAGCTGCGGGACCTGCTGGTGCAGACGCTGGAGAACAGCGGGGTCCTGAACCGCATCAAGGCTGAACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS CCA 90 bp GCCAGGGATGGGCCTCGGGCTTCCTTTCTCTGTCCACGATGCCTCTaGAAGCAGGATACGGCCCTCGAGGCGGGCTCCTGGGATTCCATG +
Preference number: 5 (lower is better)
Translates to: ARDGPRASFLCPRCL*KQDTALEAGSWDSM
Trigger: CATGGAATCCCAGGAGCCCGCCTCGAGGGCCGTATCCTGCTTCCAGAGGCATCGTGGACAGAGAAAGGAAGCCCGAGGCCCATCCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 90 bp AGTCAAGCCAGGGATGGGCCTCGGGCTTCCTTTCTCTGTCCACGATaGCTCTGGAAGCAGGATACGGCCCTCGAGGCGGGCTCCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SQARDGPRASFLCPR*LWKQDTALEAGSWD
Trigger: ATCCCAGGAGCCCGCCTCGAGGGCCGTATCCTGCTTCCAGAGGCATCGTGGACAGAGAAAGGAAGCCCGAGGCCCATCCCTGGCTTGACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 90 bp AAGCAAGGGCAGCGGAGAACGCGTCCCACGCAGTCAAGCCAGGGATaGGCCTCGGGCTTCCTTTCTCTGTCCACGATGCCTCTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: KQGQRRTRPTQSSQG*ASGFLSLSTMPLEA
Trigger: TGCTTCCAGAGGCATCGTGGACAGAGAAAGGAAGCCCGAGGCCCATCCCTGGCTTGACTGCGTGGGACGCGTTCTCCGCTGCCCTTGCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS-3UTR CAA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCGAGACAGGAAGGGCTTaGGCAAGCTCAGGTGCAGAG +
Preference number: 5 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSETGRA*ASSGAE
Trigger: CTCTGCACCTGAGCTTGCCAAAGCCCTTCCTGTCTC...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GGGCAGAAATACACAGGGCTCCCAGGCTGTACCGGCCCAGTTTATGTCCTACTTGGAGAGCACTGCCCCTaGGTGGAGCAATGCCCGCAG +
Preference number: 5 (lower is better)
Translates to: GQKYTGLPGCTGPVYVLLGEHCP*VEQCPQ
Trigger: CTGCGGGCATTGCTCCACCAAGGGGCAGTGCTCTCC...AAGTAGGACATAAACTGGGCCGGTACAGCCTGGGAGCCCTGTGTATTTCTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AACACCACAGCAGAGCCACACAGAGGGCACCTCCTTCAGAGGCCCTGCTCCAGCAGGCTGCTTTTGCTCTaGGGTTCTGACAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: NTTAEPHRGHLLQRPCSSRLLLL*GSDKET
Trigger: TGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCCT...GCTGGAGCAGGGCCTCTGAAGGAGGTGCCCTCTGTGTGGCTCTGCTGTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS CCA 90 bp CTCGGGGAAACTTTGTCAGCCTGGAGGTCCTCTGGCCAAGTCTCCTaGCGCATCTTGTCATCTTGGTCTTCTTGCAGCAGCCACACACAC +
Preference number: 5 (lower is better)
Translates to: LGETLSAWRSSGQVS*RILSSWSSCSSHTH
Trigger: GTGTGTGTGGCTGCTGCAAGAAGACCAAGATGACAAGATGCGCCAGGAGACTTGGCCAGAGGACCTCCAGGCTGACAAAGTTTCCCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 90 bp CCACGATGCCTCTGGAAGCAGGATACGGCCCTCGAGGCGGGCTCCTaGGATTCCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGC +
Preference number: 5 (lower is better)
Translates to: PRCLWKQDTALEAGS*DSMYLHGVFPFSNC
Trigger: GCAATTACTGAAGGGGAAGACACCATGCAAATACATGGAATCCCAGGAGCCCGCCTCGAGGGCCGTATCCTGCTTCCAGAGGCATCGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS-3UTR CAA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGCTCTCTGAAGAAGGTTaGCTCACACCTTTACATCCC +
Preference number: 5 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMLSEEG*LTPLHP
Trigger: GGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGAG...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGGGACAAAGGCCAGCTTaGTCTTTGCCATCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMGQRPA*SLPSKV
Trigger: AACTTTAGATGGCAAAGACAAAGCTGGCCTTTGTCC...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS GCA 90 bp TATCCAGCAACAAACACGAGCAAGCCAACGAGCTGGGAGGGCAGGTaGAAAGGTCAGAAACGCCTTCCGAAACGTTCTCAGTCACACAAG +
Preference number: 5 (lower is better)
Translates to: YPATNTSKPTSWEGR*KGQKRLPKRSQSHK
Trigger: CTTGTGTGACTGAGAACGTTTCGGAAGGCGTTTCTGACCTTTGCACCTGCCCTCCCAGCTCGTTGGCTTGCTCGTGTTTGTTGCTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS-3UTR CAA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGGCGCATCTTGTCATCTaGGTCTTCTTGCTAAACATA +
Preference number: 5 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMAHLVI*VFLLNI
Trigger: TATGTTTAGCAAGAAGACCAAGATGACAAGATGCGC...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS GCA 90 bp TGGCAGCACAACCAGCAACTCAGTTACCAGGACTCCAGGGCACTGTaGGGAACAAGAATCCGGGCAGCTCAGGGAACATTTATTCTTCTA +
Preference number: 5 (lower is better)
Translates to: WQHNQQLSYQDSRAL*GTRIRAAQGTFILL
Trigger: TAGAAGAATAAATGTTCCCTGAGCTGCCCGGATTCTTGTTCCGCACAGTGCCCTGGAGTCCTGGTAACTGAGTTGCTGGTTGTGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488525.1
CDS GCA 90 bp AAAGTTGTAAGACCTTTCGAGGCTGGCTCGACTGCAGCTGCGTTTTaGTTGGCTGTGAGTTTGCAGAACTTTGAGGCTTTCGGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: KVVRPFEAGSTAAAF*LAVSLQNFEAFGGR
Trigger: CCTTCCCCCGAAAGCCTCAAAGTTCTGCAAACTCACAGCCAAGCAAAACGCAGCTGCAGTCGAGCCAGCCTCGAAAGGTCTTACAACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 90 bp GAGAACAAGCTGGCCACTGCAGAAAGTTGTAAGACCTTTCGAGGCTaGCTCGACTGCAGCTGCGTTTTGCTTGGCTGTGAGTTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: ENKLATAESCKTFRG*LDCSCVLLGCEFAE
Trigger: TTCTGCAAACTCACAGCCAAGCAAAACGCAGCTGCAGTCGAGCCAGCCTCGAAAGGTCTTACAACTTTCTGCAGTGGCCAGCTTGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 90 bp AGCAGGATACGGCCCTCGAGGCGGGCTCCTGGGATTCCATGTATTTaGATGGTGTCTTCCCCTTCAGTAATTGCACTGTCAAATCATAGA +
Preference number: 5 (lower is better)
Translates to: SRIRPSRRAPGIPCI*MVSSPSVIALSNHR
Trigger: TCTATGATTTGACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGAATCCCAGGAGCCCGCCTCGAGGGCCGTATCCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGGCTCGGAGTTCAGCCTaGATGCGGTTCAGGACCCCG +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLARSSA*MRFRTP
Trigger: CGGGGTCCTGAACCGCATCAAGGCTGAACTCCGAGC...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGAGTGACAAATTTCAGTaGCTACTGTTCGAAAGTTTC +
Preference number: 5 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMSDKFQ*LLFESF
Trigger: GAAACTTTCGAACAGTAGCAACTGAAATTTGTCACT...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CCCAGCCAGGTTTCCACGTGGACATTGCAGGCAGCGCCCCCTATTCAGCACATGTTGAGCTTACTGATTTaGAGTCATCCCATTATTCAG +
Preference number: 5 (lower is better)
Translates to: PSQVSTWTLQAAPPIQHMLSLLI*SHPIIQ
Trigger: CTGAATAATGGGATGACTCAAAATCAGTAAGCTCAA...CATGTGCTGAATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAACCTGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACGTGTTGTCTGTGCACTaGTTTTTCCCTCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHVLSVH*FFPLVT
Trigger: AGTCACCAGAGGGAAAAACAAGTGCACAGACAACAC...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGGTCTCCTGGCGCATCTaGTCATCTTGGTCTTCTTGC +
Preference number: 5 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWVSWRI*SSWSSC
Trigger: GCAAGAAGACCAAGATGACAAGATGCGCCAGGAGAC...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AGGGTAAGGACAGCTTTCCCCTCAGATTTTGTAGATTGTTCCAGCTGCCTAGCCAGGGGTCTTACTATGTaGCCCAGGCTAGTCTCACAA +
Preference number: 5 (lower is better)
Translates to: RVRTAFPSDFVDCSSCLARGLTM*PRLVSQ
Trigger: TTGTGAGACTAGCCTGGGCAACATAGTAAGACCCCT...GGCTAGGCAGCTGGAACAATCTACAAAATCTGAGGGGAAAGCTGTCCTTACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS TCA 90 bp CACCTTCCCCAGTGGTTGGCCCTTTTTCTTTCTGTTGACAGCGCCTaGTCACTTCTAATAATAAGGGTCCACCCACAGTACCTTCTGCTT +
Preference number: 5 (lower is better)
Translates to: HLPQWLALFLSVDSA*SLLIIRVHPQYLLL
Trigger: AAGCAGAAGGTACTGTGGGTGGACCCTTATTATTAGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS GCA 90 bp ATGGAATTTATGAATCACTCAGAGGCCTTGCTGTTTCCTTCTGTCTaGCACTCTCATTCACCCGGTGCACACCCAGGTTTCCTTGAACCT +
Preference number: 5 (lower is better)
Translates to: MEFMNHSEALLFPSV*HSHSPGAHPGFLEP
Trigger: AGGTTCAAGGAAACCTGGGTGTGCACCGGGTGAATGAGAGTGGCAGACAGAAGGAAACAGCAAGGCCTCTGAGTGATTCATAAATTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS-3UTR CAA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGCTCGGAGTTCAGCCTaGATGCGGTTCAGGACCCCG +
Preference number: 5 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPARSSA*MRFRTP
Trigger: CGGGGTCCTGAACCGCATCAAGGCTGAACTCCGAGC...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGCACACCCAGGTTTCCTaGAACCTGAGGACACTTTTC +
Preference number: 5 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWHTQVS*NLRTLF
Trigger: GAAAAGTGTCCTCAGGTTCAAGGAAACCTGGGTGTG...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS TCA 90 bp AGATCAAGTGCACCTTCCCCAGTGGTTGGCCCTTTTTCTTTCTGTTaGCAGCGCCTGATCACTTCTAATAATAAGGGTCCACCCACAGTA +
Preference number: 5 (lower is better)
Translates to: RSSAPSPVVGPFSFC*QRLITSNNKGPPTV
Trigger: TACTGTGGGTGGACCCTTATTATTAGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGTGCACTTGATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAACCTTGGTATCTTACTaGGTGTTGTCTGTGCACTTG +
Preference number: 5 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQATLVSY*VLSVHL
Trigger: CAAGTGCACAGACAACACCAAGTAAGATACCAAGGT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAGATCCTACGGCTTTATaGACACCTTTCATCATGCTC +
Preference number: 5 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQADPTAL*TPFIML
Trigger: GAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACCCCTTCCTGCAGACTaGAACCTAGGGACCTCCCCA +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSPLPAD*NLGTSP
Trigger: TGGGGAGGTCCCTAGGTTCAAGTCTGCAGGAAGGGG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCCCTCTTCCCCGGTTCTaGGGAAGCCGGTCTGGTGTG +
Preference number: 5 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVPLPRF*GSRSGV
Trigger: CACACCAGACCGGCTTCCCAAGAACCGGGGAAGAGG...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS TCA 90 bp CTGCTTTTGCTCTTGGGTTCTGACAAGGAGACACTTGTATCACTCTaGTTGGCCTCATCATTGGCCTTCTTACTTGGTGTTGTCTGTGCA +
Preference number: 5 (lower is better)
Translates to: LLLLLGSDKETLVSL*LASSLAFLLGVVCA
Trigger: TGCACAGACAACACCAAGTAAGAAGGCCAATGATGAGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGCTCGGAGTTCAGCCTaGATGCGGTTCAGGACCCCG +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFARSSA*MRFRTP
Trigger: CGGGGTCCTGAACCGCATCAAGGCTGAACTCCGAGC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACCTTGTCCTTTATACCTaGGTATCTTACTTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHLVLYT*VSYLVL
Trigger: CAACACCAAGTAAGATACCAAGGTATAAAGGACAAG...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGAGGCCAGCTTTGTCTTaGCCATCTAAAGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWRPALS*PSKVLL
Trigger: CAACAGAACTTTAGATGGCAAAGACAAAGCTGGCCT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCACACACACAAAGGGTaGCGCGATCCTACGGCTTTA +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLHTHKG*RDPTAL
Trigger: TAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGTG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGTTCCTCGGGGAAACTTaGTCAGCCTGGAGGTCCTCT +
Preference number: 5 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMFLGET*SAWRSS
Trigger: AGAGGACCTCCAGGCTGACAAAGTTTCCCCGAGGAA...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCCTACCTCAGAGGCCTaGCTGTTTCCTTCTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWPTSEA*LFPSVC
Trigger: GCAGACAGAAGGAAACAGCAAGGCCTCTGAGGTAGG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TCCTGGGCATGGGCCAAGCTAACTTTGGGACAAACGATTATAGTTTATAGTTTACACCTGGTCCCACCCTaGACACATGGAGATTATGGG +
Preference number: 5 (lower is better)
Translates to: SWAWAKLTLGQTIIVYSLHLVPP*THGDYG
Trigger: CCCATAATCTCCATGTGTCAAGGGTGGGACCAGGTG...TAAACTATAAACTATAATCGTTTGTCCCAAAGTTAGCTTGGCCCATGCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGCCGTCGCCGCCATCTaGCTTCTCCAAGACAACCGC +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFAVAAI*LLQDNR
Trigger: GCGGTTGTCTTGGAGAAGCAAGATGGCGGCGACGGC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS-3UTR CAA 90 bp TACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGTCCTCTGGCCCCCACAGCTTATCACTGGTATaGATGTCATCTATTTCCACA +
Preference number: 5 (lower is better)
Translates to: YLNLYLLNSWLNWSSGPHSLSLV*MSSIST
Trigger: TGTGGAAATAGATGACATCAATACCAGTGATAAGCT...GTGGGGGCCAGAGGACCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCAGGAGGGCTCCAACTaGGGCTGGGTGTGTTTTTCT +
Preference number: 5 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVQEGSN*GWVCFS
Trigger: AGAAAAACACACCCAGCCCAAGTTGGAGCCCTCCTG...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGTGCAGAGGGCAAACCTaGCCCAGTGCTGCTGTTAAA +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWCRGQT*PSAAVK
Trigger: TTTAACAGCAGCACTGGGCAAGGTTTGCCCTCTGCA...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACATCACTCAGCCAAGTaGCCCATCCAGGCTTCTAGC +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSHHSAK*PIQASS
Trigger: GCTAGAAGCCTGGATGGGCAACTTGGCTGAGTGATG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAATTTTTACCATGTATTaGCATGGTGTCTTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQAIFTMY*HGVFPF
Trigger: GAAGGGGAAGACACCATGCAAATACATGGTAAAAAT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCACCTTCCCCAGTGGTaGGCCCTTTTTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWHLPQW*ALFLSV
Trigger: AACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGTG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACAGCCTTCTGCCCGCTaGTCTTCTTCTTACCTTGTC +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSQPSAR*SSSYLV
Trigger: GACAAGGTAAGAAGAAGACAAGCGGGCAGAAGGCTG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCTCATCATTGGCCTTCTaGTCACCAGCCTTCTGCCCG +
Preference number: 5 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVSSLAF*SPAFCP
Trigger: CGGGCAGAAGGCTGGTGACAAGAAGGCCAATGATGA...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCAGGCTGCTTTTGCTCTaGGGTTCTGACAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSRLLLL*GSDKET
Trigger: TGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCCT...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGAGGCTGCTTTTGCTCTaGGGTTCTGACAAGGAGACA +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWRLLLL*GSDKET
Trigger: TGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCCT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACTGCTCCAGCTGAGCTaGGTGGGTGGGGCAAATTCA +
Preference number: 5 (lower is better)
Translates to: HILLCFQIISLKPSSYQILLQLS*VGGANS
Trigger: TGAATTTGCCCCACCCACCAAGCTCAGCTGGAGCAG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGTTTCCACGTGGACATaGCAGGCAGCGCCCCCTATT +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFVSTWT*QAAPPI
Trigger: AATAGGGGGCGCTGCCTGCAATGTCCACGTGGAAAC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TCTCTGAAGAAGGTTTGCTCACACCTTTACATCCCCATGCAGAGCACACAGGCAAGAAATAGCCGCAGCTaGGTAATTTATAAAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SLKKVCSHLYIPMQSTQARNSRS*VIYKGK
Trigger: CTTTCCTTTATAAATTACCAAGCTGCGGCTATTTCT...TGCCTGTGTGCTCTGCATGGGGATGTAAAGGTGTGAGCAAACCTTCTTCAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCATTGGCCTTCTTACTaGGTGTTGTCTGTGCACTTG +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLHWPSY*VLSVHL
Trigger: CAAGTGCACAGACAACACCAAGTAAGAAGGCCAATG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS-3UTR CAA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCCCTTTTTCTTTCTGTaGACAGCGCCTGATCACTTC +
Preference number: 5 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSPFFFL*TAPDHF
Trigger: GAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGGG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCTGACAAGGAGACACTaGTATCACTCTGATTGGCCT +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWLTRRH*YHSDWP
Trigger: AGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCCTGACAAGGAGACACTaGTATCACTCTGATTGGCCT +
Preference number: 5 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSLTRRH*YHSDWP
Trigger: AGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAG...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGGGACAAAGGCCAGCTTaGTCTTTGCCATCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLGQRPA*SLPSKV
Trigger: AACTTTAGATGGCAAAGACAAAGCTGGCCTTTGTCC...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp ACAACCAGATGGCCCTACTTGAACCTGTACCTCTTGAATTCTTGGCTCAACTGGATTTACCAAGTCATTTaGCCAACTATGTGTAGAACC +
Preference number: 5 (lower is better)
Translates to: TTRWPYLNLYLLNSWLNWIYQVI*PTMCRT
Trigger: GGTTCTACACATAGTTGGCAAAATGACTTGGTAAAT...CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAAGTAGGGCCATCTGGTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACAGCTCGACCTTACCTaGTTCGGGGGTTCATTTTCT +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSQLDLT*FGGSFS
Trigger: AGAAAATGAACCCCCGAACAAGGTAAGGTCGAGCTG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGCCCACCAAACTATCTTaGAAAAGACCTAGCCTCCAA +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLPTKLS*KRPSLQ
Trigger: TTGGAGGCTAGGTCTTTTCAAAGATAGTTTGGTGGG...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTTGAACCTGTACCTCTaGAATTCTTGGCTCAACTGG +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLLNLYL*NSWLNW
Trigger: CCAGTTGAGCCAAGAATTCAAGAGGTACAGGTTCAA...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS GCA 90 bp AAGATCCAATTTTTGTTTCATGGGACAGTAAGTGAAGGCTGCTTTTaGTCTTGGGTTCTGACAAGGAGACACTTGTATCACTCTGATTGG +
Preference number: 5 (lower is better)
Translates to: KIQFLFHGTVSEGCF*SWVLTRRHLYHSDW
Trigger: CCAATCAGAGTGATACAAGTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCCTTCACTTACTGTCCCATGAAACAAAAATTGGATCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS GCA 90 bp AGTCCTCTGTCCTTGTTAATTAGAATACTTCCTTCTTCGTGTCTATaGAACATCTTCCAGATAATCCGCAACATCACTGAGCTGGGATAC +
Preference number: 5 (lower is better)
Translates to: SPLSLLIRILPSSCL*NIFQIIRNITELGY
Trigger: GTATCCCAGCTCAGTGATGTTGCGGATTATCTGGAAGATGTTGCATAGACACGAAGAAGGAAGTATTCTAATTAACAAGGACAGAGGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACTGACAAGGAGACACTaGTATCACTCTGATTGGCCT +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSLTRRH*YHSDWP
Trigger: AGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp ACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAGGCCAGCTTTGTCTTaGCCATCTAAAGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: TFHHALNTDVFMGSFPVMRPALS*PSKVLL
Trigger: CAACAGAACTTTAGATGGCAAAGACAAAGCTGGCCT...CATTACAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCAGGCCAGCTTTGTCTTaGCCATCTAAAGTTCTGTTG +
Preference number: 5 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSRPALS*PSKVLL
Trigger: CAACAGAACTTTAGATGGCAAAGACAAAGCTGGCCT...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGGACAAAGGCCAGCTTaGTCTTTGCCATCTAAAGTT +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWGQRPA*SLPSKV
Trigger: AACTTTAGATGGCAAAGACAAAGCTGGCCTTTGTCC...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCACACACACAAAGGGTaGCGCGATCCTACGGCTTTA +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFHTHKG*RDPTAL
Trigger: TAAAGCCGTAGGATCGCGCAACCCTTTGTGTGTGTG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp TTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTTCCCTGAAATCAGCCAACTGCTaGTTGAAATGTACGGAGTGT +
Preference number: 5 (lower is better)
Translates to: LTPFIMLLTLMFSWVPSLKSANC*LKCTEC
Trigger: ACACTCCGTACATTTCAACAAGCAGTTGGCTGATTT...CAGGGAAGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCAATTGCAAGAGTAACTaGCCAGGCAAGCTCTCAGGG +
Preference number: 5 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVNCKSN*PGKLSG
Trigger: CCCTGAGAGCTTGCCTGGCAAGTTACTCTTGCAATT...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATATCTGACCCCCAGAGATaGAGTTTCCTGCCAGGAGTT +
Preference number: 5 (lower is better)
Translates to: HILLCFQIISLKPSSYQISDPQR*SFLPGV
Trigger: AACTCCTGGCAGGAAACTCAATCTCTGGGGGTCAGA...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCAAGTCAAGATGAGATTTaGAGTGGGGACACAGCGAAG +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSSQDEI*SGDTAK
Trigger: CTTCGCTGTGTCCCCACTCAAAATCTCATCTTGACT...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCCCTTTTTCTTTCTGTaGACAGCGCCTGATCACTTC +
Preference number: 5 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNPFFFL*TAPDHF
Trigger: GAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGGG...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTCACCTTCCCCAGTGGTaGGCCCTTTTTCTTTCTGTT +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFHLPQW*ALFLSV
Trigger: AACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGTG...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATGTGTTGTCTGTGCACTaGTTTTTCCCTCTGGTGACT +
Preference number: 5 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNVLSVH*FFPLVT
Trigger: AGTCACCAGAGGGAAAAACAAGTGCACAGACAACAC...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATTCGACATACACATTTaGGGGGACACATTCAGTCCT +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSFDIHI*GDTFSP
Trigger: AGGACTGAATGTGTCCCCCAAAATGTGTATGTCGAA...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AATATTTTTACCATGTATTTGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTCGGATACAGTCAGATCTaGTGTGAGGTCATCAAGCTT +
Preference number: 5 (lower is better)
Translates to: NIFTMYLHGVFPFSNCTVGYSQI*CEVIKL
Trigger: AAGCTTGATGACCTCACACAAGATCTGACTGTATCC...GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGTAAAAATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp AACACTGATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATGATCCTACGGCTTTATaGACACCTTTCATCATGCTC +
Preference number: 5 (lower is better)
Translates to: NTDVFMGSFPVMKLSVDNDPTAL*TPFIML
Trigger: GAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC...ATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATCAGTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATACTCAGATTTTGTAGATaGTTCCAGCTGCCTAGCCAG +
Preference number: 5 (lower is better)
Translates to: HILLCFQIISLKPSSYQILRFCR*FQLPSQ
Trigger: CTGGCTAGGCAGCTGGAACAATCTACAAAATCTGAG...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGTTCAAATTTCGCATaGAACATCCCCTCTCTGAAG +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSCSNFA*NIPSLK
Trigger: CTTCAGAGAGGGGATGTTCAATGCGAAATTTGAACA...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGCAGAGGTCACAAGATTaGCAACTTTCCCAATTACTA +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWQRSQD*QLSQLL
Trigger: TAGTAATTGGGAAAGTTGCAAATCTTGTGACCTCTG...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGGATACAGTCAGATCTaGTGTGAGGTCATCAAGCTT +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFGYSQI*CEVIKL
Trigger: AAGCTTGATGACCTCACACAAGATCTGACTGTATCC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTGTCAGTCCTCTGTCCTaGTTAATTAGAATACTTCCT +
Preference number: 5 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPVSPLS*LIRILP
Trigger: AGGAAGTATTCTAATTAACAAGGACAGAGGACTGAC...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTGATCCTACGGCTTTATaGACACCTTTCATCATGCTC +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFDPTAL*TPFIML
Trigger: GAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp CCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGATTTACCAAGTCATTTaGCCAACTATGTGTAGAACC +
Preference number: 5 (lower is better)
Translates to: PTALLTPFIMLLTLMFSWIYQVI*PTMCRT
Trigger: GGTTCTACACATAGTTGGCAAAATGACTTGGTAAAT...CCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTACAACTGCCCACAGGTaGTTATCCAACATAAAGTAT +
Preference number: 5 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVTTAHR*LSNIKY
Trigger: ATACTTTATGTTGGATAACAACCTGTGGGCAGTTGT...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATCCTACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCACTGATATTAAATAACTaGCCCAACATCACTCAGCCA +
Preference number: 5 (lower is better)
Translates to: DPTALLTPFIMLLTLMFSLILNN*PNITQP
Trigger: TGGCTGAGTGATGTTGGGCAAGTTATTTAATATCAG...TGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGTAGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GATGTTTTCATGGGTTCCTTCCCTGTAATGAAACTGAGTGTAGATAATCAATTTACTTTAATCTCCAAATaGCCCTTGGTCATTCCTGGG +
Preference number: 5 (lower is better)
Translates to: DVFMGSFPVMKLSVDNQFTLISK*PLVIPG
Trigger: CCCAGGAATGACCAAGGGCAATTTGGAGATTAAAGT...AAATTGATTATCTACACTCAGTTTCATTACAGGGAAGGAACCCATGAAAACATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp GGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCGTCTTATCACTGGTATaGATGTCATCTATTTCCACA +
Preference number: 5 (lower is better)
Translates to: GFIDTFHHALNTDVFMGSVLSLV*MSSIST
Trigger: TGTGGAAATAGATGACATCAATACCAGTGATAAGAC...GGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS-3UTR CAA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTAGCTTATCACTGGTATaGATGTCATCTATTTCCACA +
Preference number: 5 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPSLSLV*MSSIST
Trigger: TGTGGAAATAGATGACATCAATACCAGTGATAAGCT...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS-3UTR CAA 90 bp GCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTCCTAGTGACAAATTTCAGTaGCTACTGTTCGAAAGTTTC +
Preference number: 5 (lower is better)
Translates to: ALLTPFIMLLTLMFSWVPSDKFQ*LLFESF
Trigger: GAAACTTTCGAACAGTAGCAACTGAAATTTGTCACT...AGGAACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000366847.9
ENST00000622353.4
CDS-3UTR CAA 90 bp ACGGCTTTATTGACACCTTTCATCATGCTCTTAACACTGATGTTTTCATGGGTTAATGGTGCAGCTGCTTaGGAAAACAATTTAGCAATT +
Preference number: 5 (lower is better)
Translates to: TALLTPFIMLLTLMFSWVNGAAA*ENNLAI
Trigger: AATTGCTAAATTGTTTTCCAAAGCAGCTGCACCATT...AACCCATGAAAACATCAGTGTTAAGAGCATGATGAAAGGTGTCAATAAAGCCGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS-3UTR CAA 90 bp CACATCCTGCTATGCTTTCAAATCATTTCACTGAAACCTAGTTCCTATCAAATATCATCTTCCAAAGAGTaGTCACTGGGAATTTACAAA +
Preference number: 5 (lower is better)
Translates to: HILLCFQIISLKPSSYQISSSKE*SLGIYK
Trigger: TTTGTAAATTCCCAGTGACAACTCTTTGGAAGATGA...TATTTGATAGGAACTAGGTTTCAGTGAAATGATTTGAAAGCATAGCAGGATGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS CCA 72 bp CCGGGACCACACGAACGAACGAGCCGACCCCCTCTGTaGGGCGGGCAGGACGGAGGCCATGCCGGGGCGCGC +
Preference number: 6 (lower is better)
Translates to: PGPHERTSRPPL*GGQDGGHAGAR
Trigger: GCGCGCCCCGGCATGGCCTCCGTCCTGCCCGCCCCACAGAGGGGGTCGGCTCGTTCGTTCGTGTGGTCCCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS CCA 72 bp CGCCGCGGATCATGCCCGAGCCTGAGGAAGAGACGCTaGGGCCGCACTCCAGGGCCCAGCTGCGGGCCGCCC +
Preference number: 6 (lower is better)
Translates to: RRGSCPSLRKRR*GRTPGPSCGPP
Trigger: GGGCGGCCCGCAGCTGGGCCCTGGAGTGCGGCCCCAGCGTCTCTTCCTCAGGCTCGGGCATGATCCGCGGCG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS TCA 72 bp ACGCGCTGCTTTCCCGCCGCGGATCATGCCCGAGCCTaGGGAAGAGACGCTGGGGCCGCACTCCAGGGCCCA +
Preference number: 6 (lower is better)
Translates to: TRCFPAADHARA*GRDAGAALQGP
Trigger: TGGGCCCTGGAGTGCGGCCCCAGCGTCTCTTCCTCAGGCTCGGGCATGATCCGCGGCGGGAAAGCAGCGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS CAA 90 bp TCCGTGTCCTCCTCGGCCACCACTGCGGCCGCCGTCGCCGCCATCTaGCTTCTCCAAGACAACCGCCGAAGCCGCGCTAACGGCCAACGG +
Preference number: 6 (lower is better)
Translates to: SVSSSATTAAAVAAI*LLQDNRRSRANGQR
Trigger: CCGTTGGCCGTTAGCGCGGCTTCGGCGGTTGTCTTGGAGAAGCAAGATGGCGGCGACGGCGGCCGCAGTGGTGGCCGAGGAGGACACGGA
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS TCA 72 bp CAGGGCCCCTTCTCAGCGCCTGCTCTCCGCTCCACGTaGGGGAAGCAAGGGCAGCGGAGAACGCGTCCCACG +
Preference number: 6 (lower is better)
Translates to: QGPFSAPALRST*GKQGQRRTRPT
Trigger: CGTGGGACGCGTTCTCCGCTGCCCTTGCTTCCCTCACGTGGAGCGGAGAGCAGGCGCTGAGAAGGGGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp CTTCGGCTGGACGCGCTGCTTTCCCGCCGCGGATCATaGCCGAGCCTGAGGAAGAGACGCTGGGGCCGCACT +
Preference number: 6 (lower is better)
Translates to: LRLDALLSRRGS*PSLRKRRWGRT
Trigger: AGTGCGGCCCCAGCGTCTCTTCCTCAGGCTCGGGCATGATCCGCGGCGGGAAAGCAGCGCGTCCAGCCGAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS TCA 72 bp GGCTCTCAGCACTCAGGGAGCGCCACTGAGCATGCGTaGGAACAGCCGCCCTCAGCTCGCGGGGGTGTCAGC +
Preference number: 6 (lower is better)
Translates to: GSQHSGSATEHA*EQPPSARGGVS
Trigger: GCTGACACCCCCGCGAGCTGAGGGCGGCTGTTCTCACGCATGCTCAGTGGCGCTCCCTGAGTGCTGAGAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS TCA 72 bp CACCGACCGTGGCTCTCAGCACTCAGGGAGCGCCACTaGGCATGCGTGAGAACAGCCGCCCTCAGCTCGCGG +
Preference number: 6 (lower is better)
Translates to: HRPWLSALRERH*ACVRTAALSSR
Trigger: CCGCGAGCTGAGGGCGGCTGTTCTCACGCATGCTCAGTGGCGCTCCCTGAGTGCTGAGAGCCACGGTCGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp CTAGTGGGTCACCACGCAGGGCCCCTTCTCAGCGCCTaGTCTCCGCTCCACGTGAGGGAAGCAAGGGCAGCG +
Preference number: 6 (lower is better)
Translates to: LVGHHAGPLLSA*SPLHVREARAA
Trigger: CGCTGCCCTTGCTTCCCTCACGTGGAGCGGAGAGCAGGCGCTGAGAAGGGGCCCTGCGTGGTGACCCACTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 72 bp TCAGTCACACAAGCTCTCCGACCCCCAGGCTTCGGCTaGACGCGCTGCTTTCCCGCCGCGGATCATGCCCGA +
Preference number: 6 (lower is better)
Translates to: SVTQALRPPGFG*TRCFPAADHAR
Trigger: TCGGGCATGATCCGCGGCGGGAAAGCAGCGCGTCCAGCCGAAGCCTGGGGGTCGGAGAGCTTGTGTGACTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476078.1
CDS CCA 72 bp GGGCCTCGGGCTTCCTTTCTCTGTCCACGATGCCTCTaGAAGCAGGATACGGCCCTCGAGGCGGGCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GPRASFLCPRCL*KQDTALEAGSW
Trigger: CCAGGAGCCCGCCTCGAGGGCCGTATCCTGCTTCCAGAGGCATCGTGGACAGAGAAAGGAAGCCCGAGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp TTGATGCGGTTCAGGACCCCGCTGTTCTCCAGCGTCTaGACCAGCAGGTCCCGCAGCTCCGTGTCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: LMRFRTPLFSSV*TSRSRSSVSSS
Trigger: CGAGGAGGACACGGAGCTGCGGGACCTGCTGGTGCAGACGCTGGAGAACAGCGGGGTCCTGAACCGCATCAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS TCA 72 bp CAGCCGCCCTCAGCTCGCGGGGGTGTCAGCTTCCTTTaGAAACCCCCTCGGGTCTGTGTGCACAAGGCTCTG +
Preference number: 6 (lower is better)
Translates to: QPPSARGGVSFL*KPPRVCVHKAL
Trigger: CAGAGCCTTGTGCACACAGACCCGAGGGGGTTTTCAAAGGAAGCTGACACCCCCGCGAGCTGAGGGCGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 72 bp CAGCGGAGAACGCGTCCCACGCAGTCAAGCCAGGGATaGGCCTCGGGCTTCCTTTCTCTGTCCACGATGCCT +
Preference number: 6 (lower is better)
Translates to: QRRTRPTQSSQG*ASGFLSLSTMP
Trigger: AGGCATCGTGGACAGAGAAAGGAAGCCCGAGGCCCATCCCTGGCTTGACTGCGTGGGACGCGTTCTCCGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS TCA 72 bp GGATCCTGGGCAGAGTCGGCTGGTTTCAGCACCGTCTaGGGCTCATCAGGAAGCTCCTCTCTCACCGACCGT +
Preference number: 6 (lower is better)
Translates to: GSWAESAGFSTV*GSSGSSSLTDR
Trigger: ACGGTCGGTGAGAGAGGAGCTTCCTGATGAGCCTCAGACGGTGCTGAAACCAGCCGACTCTGCCCAGGATCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 72 bp CTCTGGAAGCAGGATACGGCCCTCGAGGCGGGCTCCTaGGATTCCATGTATTTGCATGGTGTCTTCCCCTTC +
Preference number: 6 (lower is better)
Translates to: LWKQDTALEAGS*DSMYLHGVFPF
Trigger: GAAGGGGAAGACACCATGCAAATACATGGAATCCCAGGAGCCCGCCTCGAGGGCCGTATCCTGCTTCCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CAA 72 bp GCCTGGAGGTCCTCTGGCCAAGTCTCCTGGCGCATCTaGTCATCTTGGTCTTCTTGCAGCAGCCACACACAC +
Preference number: 6 (lower is better)
Translates to: AWRSSGQVSWRI*SSWSSCSSHTH
Trigger: GTGTGTGTGGCTGCTGCAAGAAGACCAAGATGACAAGATGCGCCAGGAGACTTGGCCAGAGGACCTCCAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS TCA 72 bp AGGCTGGCTCGACTGCAGCTGCGTTTTGCTTGGCTGTaGGTTTGCAGAACTTTGAGGCTTTCGGGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: RLARLQLRFAWL*VCRTLRLSGEG
Trigger: ACCTTCCCCCGAAAGCCTCAAAGTTCTGCAAACTCACAGCCAAGCAAAACGCAGCTGCAGTCGAGCCAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp CGGCCCTCGAGGCGGGCTCCTGGGATTCCATGTATTTaGATGGTGTCTTCCCCTTCAGTAATTGCACTGTCA +
Preference number: 6 (lower is better)
Translates to: RPSRRAPGIPCI*MVSSPSVIALS
Trigger: TGACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGAATCCCAGGAGCCCGCCTCGAGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 72 bp ACTTTGTCAGCCTGGAGGTCCTCTGGCCAAGTCTCCTaGCGCATCTTGTCATCTTGGTCTTCTTGCAGCAGC +
Preference number: 6 (lower is better)
Translates to: TLSAWRSSGQVS*RILSSWSSCSS
Trigger: GCTGCTGCAAGAAGACCAAGATGACAAGATGCGCCAGGAGACTTGGCCAGAGGACCTCCAGGCTGACAAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CAA 72 bp ACGGCCCTCGAGGCGGGCTCCTGGGATTCCATGTATTaGCATGGTGTCTTCCCCTTCAGTAATTGCACTGTC +
Preference number: 6 (lower is better)
Translates to: TALEAGSWDSMY*HGVFPFSNCTV
Trigger: GACAGTGCAATTACTGAAGGGGAAGACACCATGCAAATACATGGAATCCCAGGAGCCCGCCTCGAGGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CAA 72 bp CCTTTCGAGGCTGGCTCGACTGCAGCTGCGTTTTGCTaGGCTGTGAGTTTGCAGAACTTTGAGGCTTTCGGG +
Preference number: 6 (lower is better)
Translates to: PFEAGSTAAAFC*AVSLQNFEAFG
Trigger: CCCGAAAGCCTCAAAGTTCTGCAAACTCACAGCCAAGCAAAACGCAGCTGCAGTCGAGCCAGCCTCGAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp AACCAGCAACTCAGTTACCAGGACTCCAGGGCACTGTaGGGAACAAGAATCCGGGCAGCTCAGGGAACATTT +
Preference number: 6 (lower is better)
Translates to: NQQLSYQDSRAL*GTRIRAAQGTF
Trigger: AAATGTTCCCTGAGCTGCCCGGATTCTTGTTCCGCACAGTGCCCTGGAGTCCTGGTAACTGAGTTGCTGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488525.1
CDS CAA 72 bp GTCCTCTGGCCAAGTCTCCTGGCGCATCTTGTCATCTaGGTCTTCTTGCAGCAGCCACACACACAAAGGGTT +
Preference number: 6 (lower is better)
Translates to: VLWPSLLAHLVI*VFLQQPHTQRV
Trigger: AACCCTTTGTGTGTGTGGCTGCTGCAAGAAGACCAAGATGACAAGATGCGCCAGGAGACTTGGCCAGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp ATGAATCACTCAGAGGCCTTGCTGTTTCCTTCTGTCTaGCACTCTCATTCACCCGGTGCACACCCAGGTTTC +
Preference number: 6 (lower is better)
Translates to: MNHSEALLFPSV*HSHSPGAHPGF
Trigger: GAAACCTGGGTGTGCACCGGGTGAATGAGAGTGGCAGACAGAAGGAAACAGCAAGGCCTCTGAGTGATTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS GCA 72 bp AGACCTTTCGAGGCTGGCTCGACTGCAGCTGCGTTTTaGTTGGCTGTGAGTTTGCAGAACTTTGAGGCTTTC +
Preference number: 6 (lower is better)
Translates to: RPFEAGSTAAAF*LAVSLQNFEAF
Trigger: GAAAGCCTCAAAGTTCTGCAAACTCACAGCCAAGCAAAACGCAGCTGCAGTCGAGCCAGCCTCGAAAGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS CCA 72 bp TGGGTTCTGACAAGGAGACACTTGTATCACTCTGATTaGCCTCATCATTGGCCTTTTCCCCAGTGGTTGGCC +
Preference number: 6 (lower is better)
Translates to: WVLTRRHLYHSD*PHHWPFPQWLA
Trigger: GGCCAACCACTGGGGAAAAGGCCAATGATGAGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAGAACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS TCA 72 bp GCACCTTCCCCAGTGGTTGGCCCTTTTTCTTTCTGTTaGCAGCGCCTGATCACTTCTAATAATAAGGGTCCA +
Preference number: 6 (lower is better)
Translates to: APSPVVGPFSFC*QRLITSNNKGP
Trigger: TGGACCCTTATTATTAGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGGGCCAACCACTGGGGAAGGTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS TCA 72 bp CTCTTGGGTTCTGACAAGGAGACACTTGTATCACTCTaGTTGGCCTCATCATTGGCCTTTTCCCCAGTGGTT +
Preference number: 6 (lower is better)
Translates to: LLGSDKETLVSL*LASSLAFSPVV
Trigger: AACCACTGGGGAAAAGGCCAATGATGAGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAGAACCCAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000622353.4
CDS CAA 90 bp GGCCTTCTTGTCACCAGCCTTCTGCCCGCTTGTCTTCTTCTTACCTaGTCCTTTATACCTTGGTATCTTACTTGGTGTTGTCTGTGCACT +
Preference number: 6 (lower is better)
Translates to: GLLVTSLLPACLLLT*SFIPWYLTWCCLCT
Trigger: AGTGCACAGACAACACCAAGTAAGATACCAAGGTATAAAGGACAAGGTAAGAAGAAGACAAGCGGGCAGAAGGCTGGTGACAAGAAGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS CAA 90 bp GTAAGTGAAGGCTGCTTTTGCTCTTGGGTTCTGACAAGGAGACACTaGTATCACTCTGATTGGCCTCATCATTGGCCTTCTTACTTGGTG +
Preference number: 6 (lower is better)
Translates to: VSEGCFCSWVLTRRH*YHSDWPHHWPSYLV
Trigger: CACCAAGTAAGAAGGCCAATGATGAGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCCTTCACTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS TCA 72 bp CAGTGGTTGGCCCTTTTTCTTTCTGTTGACAGCGCCTaGTCACTTCTAATAATAAGGGTCCACCCACAGTAC +
Preference number: 6 (lower is better)
Translates to: QWLALFLSVDSA*SLLIIRVHPQY
Trigger: GTACTGTGGGTGGACCCTTATTATTAGAAGTGATCAGGCGCTGTCAACAGAAAGAAAAAGGGCCAACCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4
CDS CCA 72 bp TCTTCATTCTGGAAGGCATGGAAACAGAGAACAAGCTaGCCACTGCAGAAAGTTGTAAGACCTTTCGAGGCT +
Preference number: 6 (lower is better)
Translates to: SSFWKAWKQRTS*PLQKVVRPFEA
Trigger: AGCCTCGAAAGGTCTTACAACTTTCTGCAGTGGCCAGCTTGTTCTCTGTTTCCATGCCTTCCAGAATGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646989.1
CDS TCA 72 bp CTCTTGGGTTCTGACAAGGAGACACTTGTATCACTCTaGTTGGCCTCATCATTGGCCTTCTTACTTGGTGTT +
Preference number: 6 (lower is better)
Translates to: LLGSDKETLVSL*LASSLAFLLGV
Trigger: AACACCAAGTAAGAAGGCCAATGATGAGGCCAATCAGAGTGATACAAGTGTCTCCTTGTCAGAACCCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS CAA 90 bp GATTGGCCTCATCATTGGCCTTCTTACTTGGTGTTGTCTGTGCACTaGTTTTTCCCTCTGGTGACTTTGGTGGAGAATGTACATCAGATA +
Preference number: 6 (lower is better)
Translates to: DWPHHWPSYLVLSVH*FFPLVTLVENVHQI
Trigger: TATCTGATGTACATTCTCCACCAAAGTCACCAGAGGGAAAAACAAGTGCACAGACAACACCAAGTAAGAAGGCCAATGATGAGGCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS CAA 72 bp GTGTTGTCTGTGCACTTGTTTTTCCCTCTGGTGACTTaGGTGGAGAATGTACATCAGATAGATCAAGTGCAC +
Preference number: 6 (lower is better)
Translates to: VLSVHLFFPLVT*VENVHQIDQVH
Trigger: GTGCACTTGATCTATCTGATGTACATTCTCCACCAAAGTCACCAGAGGGAAAAACAAGTGCACAGACAACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS CAA 72 bp CATCATTGGCCTTCTTACTTGGTGTTGTCTGTGCACTaGTTTTTCCCTCTGGTGACTTTGGTGGAGAATGTA +
Preference number: 6 (lower is better)
Translates to: HHWPSYLVLSVH*FFPLVTLVENV
Trigger: TACATTCTCCACCAAAGTCACCAGAGGGAAAAACAAGTGCACAGACAACACCAAGTAAGAAGGCCAATGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000349556.4
CDS GCA 72 bp ATCCAATTTTTGTTTCATGGGACAGTAAGTGAAGGCTaGTTTTGCTCTTGGGTTCTGACAAGGAGACACTTG +
Preference number: 6 (lower is better)
Translates to: IQFLFHGTVSEG*FCSWVLTRRHL
Trigger: CAAGTGTCTCCTTGTCAGAACCCAAGAGCAAAAGCAGCCTTCACTTACTGTCCCATGAAACAAAAATTGGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000496181.1
ENST00000622353.4
CDS CCA 72 bp CTTCCTAGGTTCCTTCCTCAAACCGTAAGTTTTCTCTaGCTTAGGAATGGGATCATCAAAGAAAGAATCTCC +
Preference number: 6 (lower is better)
Translates to: LPRFLPQTVSFL*LRNGIIKERIS
Trigger: GGAGATTCTTTCTTTGATGATCCCATTCCTAAGCCAGAGAAAACTTACGGTTTGAGGAAGGAACCTAGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000496181.1
ENST00000622353.4
CDS CAA 72 bp TATACCTTGGTATCTTACTTGGTGTTGTCTGTGCACTaGTTTTTCCCTCTGGTGACTTTGGTGGAGAATGTA +
Preference number: 6 (lower is better)
Translates to: YTLVSYLVLSVH*FFPLVTLVENV
Trigger: TACATTCTCCACCAAAGTCACCAGAGGGAAAAACAAGTGCACAGACAACACCAAGTAAGATACCAAGGTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS CAA 90 bp CTTGTCCTTTATACCTTGGTATCTTACTTGGTGTTGTCTGTGCACTaGTTTTTCCCTCTGGTGACTTTGGTGGAGAATGTACATCAGATA +
Preference number: 6 (lower is better)
Translates to: LVLYTLVSYLVLSVH*FFPLVTLVENVHQI
Trigger: TATCTGATGTACATTCTCCACCAAAGTCACCAGAGGGAAAAACAAGTGCACAGACAACACCAAGTAAGATACCAAGGTATAAAGGACAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366847.9
CDS GCA 72 bp TCCTTGTTAATTAGAATACTTCCTTCTTCGTGTCTATaGAACATCTTCCAGATAATCCGCAACATCACTGAG +
Preference number: 6 (lower is better)
Translates to: SLLIRILPSSCL*NIFQIIRNITE
Trigger: CTCAGTGATGTTGCGGATTATCTGGAAGATGTTGCATAGACACGAAGAAGGAAGTATTCTAATTAACAAGGA
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000349556.4
ENST00000366847.9
CDS TCA 72 bp TTCTATCTCTTCACCAATACTTATCTCACTTTTCTCTaGGCGATGGCTGGTACTATTAAAATCATCAACATA +
Preference number: 6 (lower is better)
Translates to: FYLFTNTYLTFL*AMAGTIKIINI
Trigger: TATGTTGATGATTTTAATAGTACCAGCCATCGCTCAGAGAAAAGTGAGATAAGTATTGGTGAAGAGATAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000349556.4
ENST00000366847.9
ENST00000622353.4