RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP41 (Homo sapiens)

Ensembl gene IDs: ENSG00000106477

Ensembl transcript IDs: ENST00000223208.10, ENST00000334451.6, ENST00000343969.10, ENST00000469826.2, ENST00000471201.6, ENST00000472739.6, ENST00000477003.6, ENST00000480206.2, ENST00000484549.6, ENST00000485736.5, ENST00000489512.5, ENST00000492389.6, ENST00000498527.5, ENST00000541543.6, ENST00000603513.1, ENST00000674539.1, ENST00000674630.1, ENST00000675138.1, ENST00000675168.1, ENST00000675494.1, ENST00000675596.1, ENST00000675649.1, ENST00000675721.1, ENST00000675803.1, ENST00000675813.1, ENST00000675935.1, ENST00000675962.1, ENST00000676115.1, ENST00000676243.1, ENST00000676312.1

Found 2420 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGGGAACCAGTAATCAGTCCTTCCGGG +
Preference number: 1 (lower is better)
Translates to: PLGLDRFRADPGGRA*WQDAGREPVISPSG
Trigger: CCCGGAAGGACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 90 bp CCTGCTGGGGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAG +
Preference number: 1 (lower is better)
Translates to: PAGVGSAGGWNLRLI*TLGNSFSHQDCPEK
Trigger: CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 90 bp TTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAACCAGTAATCAGTCCTTCCGGGAAT +
Preference number: 1 (lower is better)
Translates to: LGLDRFRADPGGRAC*QDAGREPVISPSGN
Trigger: ATTCCCGGAAGGACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATG +
Preference number: 1 (lower is better)
Translates to: GGVCRRLEPKAHLHP*KQLLTPRLPGEAFM
Trigger: CATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR TCA 90 bp TCTGAAGAGTTGAGCGGCTGGAGTCCCCTGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCC +
Preference number: 1 (lower is better)
Translates to: SEELSGWSPLLLRCL*TAQGSATAHLDFLS
Trigger: GGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 90 bp AGAGTTGAGCGGCTGGAGTCCCCTGCTCCTGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCATTG +
Preference number: 1 (lower is better)
Translates to: RVERLESPAPALFMN*SGLGDCSPGFPFPL
Trigger: CAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 90 bp GCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTaGCTCCTGGCTTTTCAAACCCTTGGTCAGAGACTGAAGGCAAAC +
Preference number: 1 (lower is better)
Translates to: AEWLKEHPLEPQFSG*LLAFQTLGQRLKAN
Trigger: GTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp ACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTTGTACATCGATaGAGCACCTTCTGTCTCAGGGTTCACAAGCCCCAGACAAGGGCA +
Preference number: 1 (lower is better)
Translates to: TLAITAVQGAVVVHR*STFCLRVHKPQTRA
Trigger: TGCCCTTGTCTGGGGCTTGTGAACCCTGAGACAGAAGGTGCTTCATCGATGTACAACTACAGCACCCTGAACAGCAGTGATGGCCAAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp TACACAAGGGGGACAGAAGATAACGAGCTTTCTGGGTCTCCAGAATaGCAGACTAGCACTGAGTGGCCACCACAGTGGGCATCACATCCA +
Preference number: 1 (lower is better)
Translates to: YTRGTEDNELSGSPE*QTSTEWPPQWASHP
Trigger: TGGATGTGATGCCCACTGTGGTGGCCACTCAGTGCTAGTCTGTCATTCTGGAGACCCAGAAAGCTCGTTATCTTCTGTCCCCCTTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp CTTCAGTCCCAGCCTGAGCAGGAAAAGAAATCCAGGCTTTCTGACTaGAGAGCTGAGGCCCCCTGCCCTAATTGGACTGATTTCCTGATT +
Preference number: 1 (lower is better)
Translates to: LQSQPEQEKKSRLSD*RAEAPCPNWTDFLI
Trigger: AATCAGGAAATCAGTCCAATTAGGGCAGGGGGCCTCAGCTCTCCAGTCAGAAAGCCTGGATTTCTTTTCCTGCTCAGGCTGGGACTGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp TCGGCGACTGCTCACCTGGATTTCCTTTCCCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTGTCTTCCA +
Preference number: 1 (lower is better)
Translates to: SATAHLDFLSHWSWQ*FQHQGLKLQNHCLP
Trigger: TGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 90 bp CACCTTGGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCCTaGAGGGAGCAAGAAAGAAGGAACAGAGCTGCAAGAATGATTCCA +
Preference number: 1 (lower is better)
Translates to: HLGLSSGGVSLVQSA*REQERRNRAARMIP
Trigger: TGGAATCATTCTTGCAGCTCTGTTCCTTCTTTCTTGCTCCCTTCAGGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR CCA 90 bp TCTGGAGCCACAGTTCTCAGGCTGGCTCCTGGCTTTTCAAACCCTTaGTCAGAGACTGAAGGCAAACCTGAGTCACTTAATTTCTACCCG +
Preference number: 1 (lower is better)
Translates to: SGATVLRLAPGFSNP*SETEGKPESLNFYP
Trigger: CGGGTAGAAATTAAGTGACTCAGGTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGTGGCTCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp GCACATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAGATCCA +
Preference number: 1 (lower is better)
Translates to: AHLAAGRGSQDKVCL*YGALLSSLALCLDP
Trigger: TGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 90 bp ATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTaGCTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTG +
Preference number: 1 (lower is better)
Translates to: MKRFSNPRSHMVVAA*LASLSSSSYRMMIL
Trigger: CAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 90 bp GGGAGAGCCCTGTGGTTTGGAAAGTGTCCCTTAATCAGCCTGCAGTaGTGCAAAACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAG +
Preference number: 1 (lower is better)
Translates to: GRALWFGKCPLISLQ*CKTETQRGCLRIYK
Trigger: CTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAACCACAGGGCTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR CCA 90 bp CAGATATCCTGCTCTTCCTGTATCCCCACAATCAGAGATGCTGGCTaGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCCTTTGTCTT +
Preference number: 1 (lower is better)
Translates to: QISCSSCIPTIRDAG*LSTRAISVQRFLCL
Trigger: AAGACAAAGGAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGTGGGGATACAGGAAGAGCAGGATATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR GCA 90 bp AGAGCCCTGTGGTTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTaGAAAACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAAC +
Preference number: 1 (lower is better)
Translates to: RALWFGKCPLISLQC*KTETQRGCLRIYKN
Trigger: GTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAACCACAGGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR CCA 90 bp GGCAGAGGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTaGAAGTTTCCAATAACGTTTGTTGAAACTGCCACAAATGCAGCA +
Preference number: 1 (lower is better)
Translates to: GRGLVFFVRLAPTAP*KFPITFVETATNAA
Trigger: TGCTGCATTTGTGGCAGTTTCAACAAACGTTATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCCTCTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR TCA 90 bp ACTAATACTGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTT +
Preference number: 1 (lower is better)
Translates to: TNTVFLSKGLRGCQP*QRTSESSSPCVSTV
Trigger: AACTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACAGTATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR TCA 90 bp GCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACG +
Preference number: 1 (lower is better)
Translates to: AGQAIFSGLFRSWLP*QRAQFIPQSLITAT
Trigger: CGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR GCA 90 bp CTCACATTTTACCAGGTGCTTCAGGATGTTACACAGGTGAGAATTTaGTTCTGTACAGAACAAAGAGGATCAGCAACAGAGAGGGGAGCC +
Preference number: 1 (lower is better)
Translates to: LTFYQVLQDVTQVRI*FCTEQRGSATERGA
Trigger: GGCTCCCCTCTCTGTTGCTGATCCTCTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp GCACCTGTCTTCAAGATAAGACAGCAGACACAGGCGGTGGAAATGTaGAAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTT +
Preference number: 1 (lower is better)
Translates to: APVFKIRQQTQAVEM*KYAFPRADVSVPEF
Trigger: AAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGTCTTATCTTGAAGACAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp AGTCGGCCTGAAGGGAGCAAGAAAGAAGGAACAGAGCTGCAAGAATaGTTCCAGGGACAATCTGCCAAGTACAGTTTTAAGCTAATGAAG +
Preference number: 1 (lower is better)
Translates to: SRPEGSKKEGTELQE*FQGQSAKYSFKLMK
Trigger: CTTCATTAGCTTAAAACTGTACTTGGCAGATTGTCCCTGGAATCATTCTTGCAGCTCTGTTCCTTCTTTCTTGCTCCCTTCAGGCCGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR GCA 90 bp TACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAG +
Preference number: 1 (lower is better)
Translates to: YQQDRQFSVGFSEAG*HDKEHNLFLSPLSQ
Trigger: CTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 90 bp CGGAGTCCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATG +
Preference number: 1 (lower is better)
Translates to: RSPLHLVCPQLSNQS*YFQLAIISVHLTWM
Trigger: CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGGACTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 90 bp TATCCTTTAAAAGATGCAGCCCATCCGTCCACAGCATTTGAGAAGTaGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTA +
Preference number: 1 (lower is better)
Translates to: YPLKDAAHPSTAFEK*PLFASHFTRCFRML
Trigger: TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGATGGGCTGCATCTTTTAAAGGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp ATATTGATATCCTTTAAAAGATGCAGCCCATCCGTCCACAGCATTTaGGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAG +
Preference number: 1 (lower is better)
Translates to: ILISFKRCSPSVHSI*EVASLCLTFYQVLQ
Trigger: CTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGATGGGCTGCATCTTTTAAAGGATATCAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp AAACCTGAGTCACTTAATTTCTACCCGAACCTCAGTCTCCTCATCTaGAAATGGGGGTGCCTGCCTCATCAGACTGTTGTGGAAATTAAA +
Preference number: 1 (lower is better)
Translates to: KPESLNFYPNLSLLI*KWGCLPHQTVVEIK
Trigger: TTTAATTTCCACAACAGTCTGATGAGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAGGTTCGGGTAGAAATTAAGTGACTCAGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp ATGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTaGGACAAAGTCTTTACTTCCAGGGTTTGCCTTGCAGGTGACCAC +
Preference number: 1 (lower is better)
Translates to: MLRGSEKRKNIYLPK*DKVFTSRVCLAGDH
Trigger: GTGGTCACCTGCAAGGCAAACCCTGGAAGTAAAGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 90 bp CTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTACACAGGTaGGAATTTGCTTCTGTACAGAACAAAGAGGATCAGCAACAGAGA +
Preference number: 1 (lower is better)
Translates to: LFASHFTRCFRMLHR*EFASVQNKEDQQQR
Trigger: TCTCTGTTGCTGATCCTCTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp TATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGT +
Preference number: 1 (lower is better)
Translates to: YFQLAIISVHLTWMD*SWAMGVITDILTTS
Trigger: ACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR TCA 90 bp CAAGATGCTGGCAGGGAACCAGTAATCAGTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCTAGGTTTGGAAAATCATCAGAAAAA +
Preference number: 1 (lower is better)
Translates to: QDAGREPVISPSGNF*AKTFRPRFGKSSEK
Trigger: TTTTTCTGATGATTTTCCAAACCTAGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGGACTGATTACTGGTTCCCTGCCAGCATCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR GCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTaGTGTAGTTGTACATCGATGAAGCACCTTCTGTCTCAGGGTTCA +
Preference number: 1 (lower is better)
Translates to: HLRYYLNFGHHCCSG*CSCTSMKHLLSQGS
Trigger: TGAACCCTGAGACAGAAGGTGCTTCATCGATGTACAACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp TGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTG +
Preference number: 1 (lower is better)
Translates to: CHGLSSAEVSGNDPT*EMLRGSEKRKNIYL
Trigger: CAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 90 bp TTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTATaGGGAAACATGACAGGCTCCTCATTAAAGCTATGTGTACGTTGG +
Preference number: 1 (lower is better)
Translates to: LALAKAELSSQAINL*GNMTGSSLKLCVRW
Trigger: CCAACGTACACATAGCTTTAATGAGGAGCCTGTCATGTTTCCCCATAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp GCATGGTTATTTAAAATCCTTACCAACAGGGCAAAGCAAGCACTGTaGAGAAATACACATAAATATATCCAACCTGCCAGATCTCTCAGG +
Preference number: 1 (lower is better)
Translates to: AWLFKILTNRAKQAL*RNTHKYIQPARSLR
Trigger: CCTGAGAGATCTGGCAGGTTGGATATATTTATGTGTATTTCTCCACAGTGCTTGCTTTGCCCTGTTGGTAAGGATTTTAAATAACCATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp ACCTGGAAAGAAGCCTGCATGTCTTCTAATCTCTGGTCATCAAGTTaGGGCCAACACAAGGACATGAAATCTTTCTTAACTATTTCATCA +
Preference number: 1 (lower is better)
Translates to: TWKEACMSSNLWSSS*GQHKDMKSFLTISS
Trigger: TGATGAAATAGTTAAGAAAGATTTCATGTCCTTGTGTTGGCCTCAACTTGATGACCAGAGATTAGAAGACATGCAGGCTTCTTTCCAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR CCA 90 bp CACTTATTAAGGGCCACTGTCACAGGGTTGGTGATTTTCACTCTCTaGGAGCTTATAGTCAAAATAATTGCAACAGGAAGACATATTGAT +
Preference number: 1 (lower is better)
Translates to: HLLRATVTGLVIFTL*ELIVKIIATGRHID
Trigger: ATCAATATGTCTTCCTGTTGCAATTATTTTGACTATAAGCTCCCAGAGAGTGAAAATCACCAACCCTGTGACAGTGGCCCTTAATAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 90 bp TATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATATCCTGCT +
Preference number: 1 (lower is better)
Translates to: YLVILLPVSSLDLIC*YLGFCGILFIRYPA
Trigger: AGCAGGATATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR GCA 90 bp GTATATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATATCCT +
Preference number: 1 (lower is better)
Translates to: VYLVILLPVSSLDLI*WYLGFCGILFIRYP
Trigger: AGGATATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR CCA 90 bp AGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTTAGCAATTCAATTAATGCTGATTCA +
Preference number: 1 (lower is better)
Translates to: RVPHPYLRPFVPPIK*NECQSFSNSINADS
Trigger: TGAATCAGCATTAATTGAATTGCTAAATGACTGACATTCATTCCATTTAATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR TCA 90 bp TCATTAAAGCTATGTGTACGTTGGCTGAATTTTATACAAGATTCTTaGATCTTGTGGAAAATTGGGCATGGCTTGACATCTGAACAATGT +
Preference number: 1 (lower is better)
Translates to: SLKLCVRWLNFIQDS*ILWKIGHGLTSEQC
Trigger: ACATTGTTCAGATGTCAAGCCATGCCCAATTTTCCACAAGATTCAAGAATCTTGTATAAAATTCAGCCAACGTACACATAGCTTTAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 90 bp AACACAAGAAAAATTACCTACGTATTTCTTCCTAGCCTAGGACTCTaGTTTCACTTACATTCCACAAGGGAATTAGAGAAAACACGATTT +
Preference number: 1 (lower is better)
Translates to: NTRKITYVFLPSLGL*FHLHSTRELEKTRF
Trigger: AAATCGTGTTTTCTCTAATTCCCTTGTGGAATGTAAGTGAAATCAGAGTCCTAGGCTAGGAAGAAATACGTAGGTAATTTTTCTTGTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 2 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: GWRGRHLADSERFGHQAPDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GWRGRHLADSERFGHQAPGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: LSGWRGRHLADSERFGHQCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: GGLSGWRGRHLADSERFGEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 2 (lower is better)
Translates to: GGLSGWRGRHLADSERFGLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: GWRGRHLADSERFGHQAPSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGCGCAGTCACAAGTACTaGCGTGCGTACGCGGGGAGA +
Preference number: 2 (lower is better)
Translates to: LSGWRGRHLADSERFGHQRSHKY*RAYAGR
Trigger: TCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCG...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR TCA 90 bp TCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTTGGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: SSGGVSLVQSARMICRPLEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...CAAGGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: TWQILSASGTRHLGLSSGVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: GLSGWRGRHLADSERFGHGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: GWRGRHLADSERFGHQAPHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: GWRGRHLADSERFGHQAPRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: GLSGWRGRHLADSERFGHTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: GLSGWRGRHLADSERFGHAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GGLSGWRGRHLADSERFGVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: TWQILSASGTRHLGLSSGPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: GWRGRHLADSERFGHQAPGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: LVGVALWGWIVSGQTQEEGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: GLSGWRGRHLADSERFGHRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: LADSERFGHQAPWTLFRREELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AAACCTAGTCTGTCCTCCACTACTTCCTTGGTAGAGAGGATGCAGACGAGGAGTGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: KPSLSSTTSLVERMQTRSEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...ACTCCTCGTCTGCATCCTCTCTACCAAGGAAGTAGTGGAGGACAGACTAGGTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 2 (lower is better)
Translates to: LHLFSAGRGGPLGLDRFRHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: SSAPLETASHTKTARRSLGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: SSAPLETASHTKTARRSLARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 2 (lower is better)
Translates to: LSGWRGRHLADSERFGHQFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 2 (lower is better)
Translates to: GLSGWRGRHLADSERFGHFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 2 (lower is better)
Translates to: GRHLADSERFGHQAPWTLFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: LSGWRGRHLADSERFGHQDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAACTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: LVGVALWGWIVSGQTQEELLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: LVGVALWGWIVSGQTQEERGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 2 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 2 (lower is better)
Translates to: GGLSGWRGRHLADSERFGTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR GCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: SAPLETASHTKTARRSLHGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: GGLSGWRGRHLADSERFGDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: WAMGVITDILTTSEGRFGARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 2 (lower is better)
Translates to: SSAPLETASHTKTARRSLHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 2 (lower is better)
Translates to: APALFMNCSGLGDCSPGFVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: GLSSGGVSLVQSARMICRVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 2 (lower is better)
Translates to: IYSQLVGVALWGWIVSGQLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 2 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674539.1
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGT +
Preference number: 2 (lower is better)
Translates to: GLSGWRGRHLADSERFGHCPVLI*YAGILG
Trigger: ACCCAAGATACCAGCATATCAAATCAAGACTGGACA...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR GCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: GRHLADSERFGHQAPWTLTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 2 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGATTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: ELETGTGKRPIPYICHGLVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: SSAPLETASHTKTARRSLHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 2 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEACQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 2 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000674539.1
ENST00000674630.1
ENST00000675813.1
3UTR-3UTR GCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 2 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: IYSQLVGVALWGWIVSGQAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: TQALASILKTGPAICWAEGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: WAMGVITDILTTSEGRFGHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 2 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 2 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000674539.1
ENST00000674630.1
ENST00000675813.1
3UTR-3UTR CCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 2 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CTTTCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 2 (lower is better)
Translates to: LSHWSWQWFQHQGLKLQNVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...ATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 2 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 2 (lower is better)
Translates to: RGFQIHARTWWWPPDWPAFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: APALFMNCSGLGDCSPGFPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: GRHLADSERFGHQAPWTLHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: VNNREETRACHTSGFYGHGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: HEEVFKSTLAHGGGRLTGHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...GCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 2 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 2 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 2 (lower is better)
Translates to: RLKYAVNNREETRACHTSERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGCTCGGGAGGCTGATGTaGGAGAATCGCTTGAACCGG +
Preference number: 2 (lower is better)
Translates to: TQALASILKTGPAICWAELGRLM*ENRLNR
Trigger: CCGGTTCAAGCGATTCTCCCACATCAGCCTCCCGAG...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR TCA 90 bp TTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: FSAGRGGPLGLDRFRADPRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...TGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SWAMGVITDILTTSEGRFRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVARGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTCAGCTAGTCAACCCCTaGGACGCTGGTAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCQLVNP*DAGRKP
Trigger: TGGCTTCCTACCAGCGTCTCAGGGGTTGACTAGCTG...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 2 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCCTTACTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLLTRMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGTAAG...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 2 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPERGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGCAGCTAGTCAACCCCTaGGACGCTGGTAGGAAGCCA +
Preference number: 2 (lower is better)
Translates to: EQMFQFLNFHRLLCRQAEQLVNP*DAGRKP
Trigger: TGGCTTCCTACCAGCGTCTCAGGGGTTGACTAGCTG...CTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 2 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: GLSSGGVSLVQSARMICRVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: LADSERFGHQAPWTLFRRCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEASLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: RGFQIHARTWWWPPDWPARQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: CSGVLKRGRTFICLSETKGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCACAAATGCAGCAGGGGACTAGCGGTGAAACAGATGAAGAAACTGAAGGGTCCCAAGGGCTGTGTCTTTaGGTACTTCGCTCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: PQMQQGTSGETDEETEGSQGLCL*VLRSSQ
Trigger: CTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTG...GGACCCTTCAGTTTCTTCATCTGTTTCACCGCTAGTCCCCTGCTGCATTTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR CCA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 2 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGIVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 2 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGIVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGGGTGGATCACTTGTaGCCAGAAGTTCGAGACCAG +
Preference number: 2 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSWVDHL*PEVRDQ
Trigger: CTGGTCTCGAACTTCTGGCCACAAGTGATCCACCCA...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR TCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: SAPLETASHTKTARRSLHRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCTCTGAGCCTCTATAGCACTCGGCTTACAACTCACAAGGCATTTATCACTGTACCCTGCGGTGGTGACTaGACAAAACGCAGCCAGGGA +
Preference number: 2 (lower is better)
Translates to: PLSLYSTRLTTHKAFITVPCGGD*TKRSQG
Trigger: TCCCTGGCTGCGTTTTGTTCAGTCACCACCGCAGGG...TACAGTGATAAATGCCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR TCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 2 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp TCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTTGGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 2 (lower is better)
Translates to: SSGGVSLVQSARMICRPLDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...CAAGGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: IYSQLVGVALWGWIVSGQTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: RLKYAVNNREETRACHTSCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: LVAMTKSTIYSSVPYHSYCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGGCACAGTCTGGCAGTaGTGGGGAGCTGGTAAGATA +
Preference number: 2 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTGTVWQ*WGAGKI
Trigger: TATCTTACCAGCTCCCCAGCACTGCCAGACTGTGCC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334451.6
3UTR-3UTR GCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTTCACAAGTACTGGCGTaGGTACGCGGGGAGAGATCG +
Preference number: 2 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFSQVLA*VRGERS
Trigger: CGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGA...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 2 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 2 (lower is better)
Translates to: LSHLWFLWSPVKILPEVASARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTCACCAAAGGAGAACATaGTTGTGCCCACCCAGAGTG +
Preference number: 2 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCHQRRT*LCPPRV
Trigger: CACTCTGGGTGGGCACAACCATGTTCTCCTTTGGTG...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTATTCATGGCACAGTCTaGCAGTGCTGGGGAGCTGGT +
Preference number: 2 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTIHGTV*QCWGAG
Trigger: ACCAGCTCCCCAGCACTGCCAGACTGTGCCATGAAT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334451.6
3UTR-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 2 (lower is better)
Translates to: CSGVLKRGRTFICLSETKGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: LSQLRSQTIKINTALFHLGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 2 (lower is better)
Translates to: SGVLKRGRTFICLSETKSERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCAAGGGCTGTGTCTTTaGGTACTTCGCTCCTCGCAG +
Preference number: 2 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEQGLCL*VLRSSQ
Trigger: CTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR TCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: HLRYYLNFGHHCCSGCCSARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACACTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAATGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: LSSSSISVSTQALASILKCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 2 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: VFKSTLAHGGGRLTGQPFCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...GAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSSSSISVSTQALASILKPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: SAPLETASHTKTARRSLHGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TTTGAGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTAGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: FEKWPLFASHFTRCFRMLGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 2 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 2 (lower is better)
Translates to: PLSQLRSQTIKINTALFHGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTACAGTCTGGCAGTGCTaGGGAGCTGGTAAGATACAC +
Preference number: 2 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTTVWQC*GAGKIH
Trigger: GTGTATCTTACCAGCTCCCCAGCACTGCCAGACTGT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334451.6
3UTR-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAACGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCACGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 2 (lower is better)
Translates to: NREETRACHTSGFYGHLSRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: HEEVFKSTLAHGGGRLTGRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...GCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 2 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 2 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGACTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CAA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGG +
Preference number: 2 (lower is better)
Translates to: TRLSALTKDFGVLFT*CVHSCPTKAGIFNW
Trigger: CCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CAA 90 bp AAGATGCAGCCCATCCGTCCACAGCATTTGAGAAGTGGCCTCTCTTaGCCTCACATTTTACCAGGTGCTTCAGGATGTTACACAGGTGAG +
Preference number: 2 (lower is better)
Translates to: KMQPIRPQHLRSGLS*PHILPGASGCYTGE
Trigger: CTCACCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGATGGGCTGCATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CAA 90 bp TCTCTGGGTACTTCCTGTAGAGGGAGATCTAAAAACCTCAGGGTTTaGAATGCCTCGCCCACAAAGGCAGGATACACAAGGGGGACAGAA +
Preference number: 2 (lower is better)
Translates to: SLGTSCRGRSKNLRV*NASPTKAGYTRGTE
Trigger: TTCTGTCCCCCTTGTGTATCCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTTAGATCTCCCTCTACAGGAAGTACCCAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CAA 90 bp CCTACTCTTAAGATGGGGGTGGTGTGTGACCTTTGCGTGCTGAATTaGGGAGGATACTTTAAGCCTGGCAGAGACAGGGTAATAACACCC +
Preference number: 2 (lower is better)
Translates to: PTLKMGVVCDLCVLN*GGYFKPGRDRVITP
Trigger: GGGTGTTATTACCCTGTCTCTGCCAGGCTTAAAGTATCCTCCCAAATTCAGCACGCAAAGGTCACACACCACCCCCATCTTAAGAGTAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPICQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGATACCAAGCCCAATATaGTCGTGCTGGTCCTGGCTA +
Preference number: 2 (lower is better)
Translates to: EQMFQFLNFHRLLCRQAEIPSPI*SCWSWL
Trigger: TAGCCAGGACCAGCACGATCATATTGGGCTTGGTAT...CTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 2 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 2 (lower is better)
Translates to: DKVCLWYGALLSSLALCLALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp TATTTTGCCCGTTTTCCAAAGGTTTGGTCAGCTTACTCCTGCTCTTCCTGTATCTCACAAGTACTGGCGTaGGTACGCGGGGAGAGATCG +
Preference number: 2 (lower is better)
Translates to: YFARFPKVWSAYSCSSCISQVLA*VRGERS
Trigger: CGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGA...GATACAGGAAGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACGGGCAAAATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR GCA 90 bp AAACCTAGTCTGTCCTCCACTACTTCCTTGGTAGAGAGGATGCAGACGAGGAGTCCAAGATCATCCCATTaGATTCCAGCCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: KPSLSSTTSLVERMQTRSPRSSH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAATGGGATGATCTTGG...ACTCCTCGTCTGCATCCTCTCTACCAAGGAAGTAGTGGAGGACAGACTAGGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: ELETGTGKRPIPYICHGLAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGGTCCACTATACGCAATTTATTAAAGGGCAGAGGCCTTGTCTTCTTTGTACGTCGCAGTCACAAGTACTaGCGTGCGTACGCGGGGAGA +
Preference number: 2 (lower is better)
Translates to: WSTIRNLLKGRGLVFFVRRSHKY*RAYAGR
Trigger: TCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCG...ACGTACAAAGAAGACAAGGCCTCTGCCCTTTAATAAATTGCGTATAGTGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR CCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACACTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 2 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAAGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 2 (lower is better)
Translates to: RTWWWPPDWPAFHHRHTEDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...TTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR CAA 90 bp TTGTCTTTTCTGTTTTGTAACTGTCACTCCGAGACTGTAAGCCATTaGAGGGCAAGGGCTGTGTCTTTGGGTACTTCGCTCCTCGCAGTC +
Preference number: 2 (lower is better)
Translates to: LSFLFCNCHSETVSH*RARAVSLGTSLLAV
Trigger: GACTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTGCCCTCAAATGGCTTACAGTCTCGGAGTGACAGTTACAAAACAGAAAAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
3UTR-3UTR TCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: WAMGVITDILTTSEGRFGAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: VNNREETRACHTSGFYGHVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPELSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp TGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCACTGCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 2 (lower is better)
Translates to: CSRQSCNWVTVSSNNVALPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...CAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: SQLRSQTIKINTALFHLICWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: VNNREETRACHTSGFYGHTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VNNREETRACHTSGFYGHVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 2 (lower is better)
Translates to: ALASILKTGPAICWAESSFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTGATCTCTCAGGTGAGTaGACACCAATTCTAACAGGT +
Preference number: 2 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCDLSGE*TPILTG
Trigger: ACCTGTTAGAATTGGTGTGCACTCACCTGAGAGATC...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR GCA 90 bp ATGCAGCAGGGGACTAGCGGTGAAACAGATGAAGAAACTGAAGGGTCCTATGGACACGTGCCATTAGTGTaGAGCGCTTCCTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: MQQGTSGETDEETEGSYGHVPLV*SASFVF
Trigger: AAAGACAAAGGAAGCGCTGCACACTAATGGCACGTG...TCCATAGGACCCTTCAGTTTCTTCATCTGTTTCACCGCTAGTCCCCTGCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAACACGTGCCATTAGTGTaGAGCGCTTCCTTTGTCTTT +
Preference number: 2 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQHVPLV*SASFVF
Trigger: AAAGACAAAGGAAGCGCTGCACACTAATGGCACGTG...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR GCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTACCCCACAATCAGAGATaGTGGCTGGCTTTCAACACG +
Preference number: 2 (lower is better)
Translates to: DKVCLWYGALLSSLALCLPHNQR*WLAFNT
Trigger: CGTGTTGAAAGCCAGCCAGCATCTCTGATTGTGGGG...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: NNREETRACHTSGFYGHLSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: ELETGTGKRPIPYICHGLSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: NREETRACHTSGFYGHLSSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: SQLRSQTIKINTALFHLIHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCATTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 2 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 2 (lower is better)
Translates to: CSGVLKRGRTFICLSETKEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000674630.1
ENST00000675813.1
3UTR-3UTR CCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATAGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 2 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFIVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: QRAQFIPQSLITATITDHYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GCTTTTCAAACCCTTGGTCAGAGACTGAAGGCAAACCTGAGTCACTTAATTTCTCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: AFQTLGQRLKANLSHLISLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...AGAAATTAAGTGACTCAGGTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: SSAPLETASHTKTARRSLRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATCCCAGAGAGGGTGCTTaGGAATATACAAGAACCCTG +
Preference number: 2 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNPREGA*EYTRTL
Trigger: CAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGG...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR TCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 2 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 2 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGIGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 2 (lower is better)
Translates to: SQDKVCLWYGALLSSLALLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...AAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGTTACATGGGATTCTaGGAATTCCACAAGAAATCC +
Preference number: 2 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSCYMGF*EFHKKS
Trigger: GGATTTCTTGTGGAATTCTCAGAATCCCATGTAACA...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR GCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 2 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCAATAACTGGTCAGCTTACTCCTaGTCTTCCTGTATCCCCACA +
Preference number: 2 (lower is better)
Translates to: PCLLCTSSTYCTVEVSNNWSAYS*SSCIPT
Trigger: TGTGGGGATACAGGAAGAGCAGGAGTAAGCTGACCA...GTTATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR GCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 2 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CTTTCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATTTTCATCAGATATCCTaGTCTTCCTGTATCCCCACA +
Preference number: 2 (lower is better)
Translates to: LSHWSWQWFQHQGLKLQNFHQIS*SSCIPT
Trigger: TGTGGGGATACAGGAAGAGCAGGATATCTGATGAAA...ATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: CSGVLKRGRTFICLSETKGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: TQALASILKTGPAICWAELSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CAA 90 bp CCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTC +
Preference number: 2 (lower is better)
Translates to: PDKGLRSPLHLVCPQ*SNQSWYFQLAIISV
Trigger: GACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCACTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: GERKVLTDYLQSRARRWSLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGGACAATGCAGCCAATaGAAGACTGTGGGGACTAAT +
Preference number: 2 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNGQCSQ*KTVGTN
Trigger: ATTAGTCCCCACAGTCTTTCATTGGCTGCATTGTCC...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 2 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 2 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: SWAMGVITDILTTSEGRFHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: SWAMGVITDILTTSEGRFTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 2 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: DKVCLWYGALLSSLALCLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 2 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GAGTTAGCTTGGTTCAGTCGGCCTCCGGAAAGCATGAAGAGGTTTTCAAATCCAGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: ELAWFSRPPESMKRFSNPGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...TGGATTTGAAAACCTCTTCATGCTTTCCGGAGGCCGACTGAACCAAGCTAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000492389.6
3UTR-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAATATCTGTTGTTACATaGGATTCTGAGAATTCCACA +
Preference number: 2 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSISVVT*DSENST
Trigger: TGTGGAATTCTCAGAATCCCATGTAACAACAGATAT...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCATGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: LSSSSISVSTQALASILKRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 2 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 2 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGIPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 2 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: SQLRSQTIKINTALFHLITGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CCTCTGAGCCTCTATAGCACTCGGCTTACAACTCACAAGGCATTTATCACTGTAATAGCAACAGTGCTGTaGAAACACAGAGTGCAACTG +
Preference number: 2 (lower is better)
Translates to: PLSLYSTRLTTHKAFITVIATVL*KHRVQL
Trigger: CAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTAT...TACAGTGATAAATGCCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR GCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 2 (lower is better)
Translates to: SQLRSQTIKINTALFHLIAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCAGTCATACTGTTACCTaGACTGCAGCACTAATTAAA +
Preference number: 2 (lower is better)
Translates to: GSQDKVCLWYGALLSSLASHTVT*TAALIK
Trigger: TTTAATTAGTGCTGCAGTGCAGGTAACAGTATGACT...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675721.1
3UTR-3UTR CCA 90 bp TTTGAGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTAGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: FEKWPLFASHFTRCFRMLGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: NREETRACHTSGFYGHLSHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: ELETGTGKRPIPYICHGLTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: ELETGTGKRPIPYICHGLLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 2 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCAATAACCGTTTTCCAAAGGTTTaGTCAGCTTACTCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: PCLLCTSSTYCTVEVSNNRFPKV*SAYSCS
Trigger: AGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACG...GTTATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR CAA 90 bp TCTTTATCCCTTCCATTGTCTAGCATAGGAGACACTCAAAAATACTaGCTGAATGATGGTCAGGTGCACTGGATCATGCCTGCAATCCCA +
Preference number: 2 (lower is better)
Translates to: SLSLPLSSIGDTQKY*LNDGQVHWIMPAIP
Trigger: TGGGATTGCAGGCATGATCCAGTGCACCTGACCATCATTCAGCAAGTATTTTTGAGTGTCTCCTATGCTAGACAATGGAAGGGATAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: CISKQGLTRLSALTKDFGRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATGGCATTAGCAAAGGCTaGACTAAGTTCTCAGGCAAT +
Preference number: 2 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNGISKG*TKFSGN
Trigger: ATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCC...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp GCTTTTCAAACCCTTGGTCAGAGACTGAAGGCAAACCTGAGTCACTTAATTTCTGTAGTTGTACATCGATaGAGCACCTTCTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: AFQTLGQRLKANLSHLISVVVHR*STFCLR
Trigger: CCTGAGACAGAAGGTGCTTCATCGATGTACAACTAC...AGAAATTAAGTGACTCAGGTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGCTCTGGTCATCAAGTTaGGGCCAACACAAGGACATG +
Preference number: 2 (lower is better)
Translates to: CSGVLKRGRTFICLSETKLWSSS*GQHKDM
Trigger: CATGTCCTTGTGTTGGCCTCAACTTGATGACCAGAG...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR TCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTTCATATGATGAGGTaGTATTCAAAGCTGCAAACC +
Preference number: 2 (lower is better)
Translates to: ELETGTGKRPIPYICHGLFHMMR*YSKLQT
Trigger: GGTTTGCAGCTTTGAATATCACCTCATCATATGAAA...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR GCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACATGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: SQDKVCLWYGALLSSLALHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...AAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 2 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGATTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: CISKQGLTRLSALTKDFGLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 2 (lower is better)
Translates to: SHLWFLWSPVKILPEVASTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 2 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 2 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: LKYAVNNREETRACHTSGRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CAA 90 bp TATCTGTTGTTACATGGGATTCTGAGAATTCCACAAGAAATCCTTTaGCTCGAGTCTTCAGCATTAGGGCTTTGTGACAGAGCCCTGAAG +
Preference number: 2 (lower is better)
Translates to: YLLLHGILRIPQEIL*LESSALGLCDRALK
Trigger: CTTCAGGGCTCTGTCACAAAGCCCTAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGGAATTCTCAGAATCCCATGTAACAACAGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 2 (lower is better)
Translates to: HLRYYLNFGHHCCSGCCSTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 2 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCAAACTTTGGCCATCACTaGTGTTCAGGGTGCTGTAGT +
Preference number: 2 (lower is better)
Translates to: GERKVLTDYLQSRARRWSNFGHH*CSGCCS
Trigger: ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTT...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 2 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 2 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPITCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCACAGGTCTGGCTGACCTaGCTTTCCACATATATACAG +
Preference number: 2 (lower is better)
Translates to: GERKVLTDYLQSRARRWSQVWLT*LSTYIQ
Trigger: CTGTATATATGTGGAAAGCCAGGTCAGCCAGACCTG...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp CCTCTGAGCCTCTATAGCACTCGGCTTACAACTCACAAGGCATTTATCACTGTAAAATACTTCCCAATTTaGTCTGAGTTTCTGCACACC +
Preference number: 2 (lower is better)
Translates to: PLSLYSTRLTTHKAFITVKYFPI*SEFLHT
Trigger: GGTGTGCAGAAACTCAGACCAAATTGGGAAGTATTT...TACAGTGATAAATGCCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR CCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAGAGCATTTTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTAAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 2 (lower is better)
Translates to: QSILALAKAELSSQAINLRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...TAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGGTAGTTGTACATCGATaGAGCACCTTCTGTCTCAGG +
Preference number: 2 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKVVVHR*STFCLR
Trigger: CCTGAGACAGAAGGTGCTTCATCGATGTACAACTAC...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTAGGATGTTACACAGGTaGGAATTTGCTTCTGTACAG +
Preference number: 2 (lower is better)
Translates to: KYAFPRADVSVPEFPSPFRMLHR*EFASVQ
Trigger: CTGTACAGAAGCAAATTCTCACCTGTGTAACATCCT...AAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 2 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 2 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 2 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTAAAGTCTCTCTTCAATaGGTAATTCTTGCCACTATC +
Preference number: 2 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIKVSLQ*VILATI
Trigger: GATAGTGGCAAGAATTACGCATTGAAGAGAGACTTT...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 2 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 2 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GAGAAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: EKIVLLRQILPRSSYQQDLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...GTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: RLKYAVNNREETRACHTSLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 2 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675813.1
3UTR-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 2 (lower is better)
Translates to: LSSSSISVSTQALASILKDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 2 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACAGAGCTGCAAGAATaGTTCCAGGGACAATCTGCC +
Preference number: 2 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINTELQE*FQGQSA
Trigger: GGCAGATTGTCCCTGGAATCATTCTTGCAGCTCTGT...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 2 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp AAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTTATATTCCACACATTTaGGGTGTTTCCTGGGGAAAA +
Preference number: 2 (lower is better)
Translates to: KYAFPRADVSVPEFPSPFYIPHI*GVSWGK
Trigger: TTTTCCCCAGGAAACACCGCAAATGTGTGGAATATA...AAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR GCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp TTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCAATAACGTTTGTTCCTAATGTCCTATTTTaGCCGTTTTCCAAAGGTTTG +
Preference number: 2 (lower is better)
Translates to: FFVRLAPTAPWKFPITFVPNVLF*PFSKGL
Trigger: CAAACCTTTGGAAAACGGGCAAAATAGGACATTAGG...AACAAACGTTATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR CCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 2 (lower is better)
Translates to: LSQLRSQTIKINTALFHLGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 2 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR GCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGAGTGTGGAAAAATGTaGATTTTTCTATCTATGCTG +
Preference number: 2 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSECGKM*IFLSML
Trigger: CAGCATAGATAGAAAAATGCACATTTTTCCACACTC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR GCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 2 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR GCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 2 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 2 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: RLKYAVNNREETRACHTSVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTACTCTAAAACAGAACTaGGCTGAATCTGAAAGTTAT +
Preference number: 2 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPTLKQN*AESESY
Trigger: ATAACTTTCAGATTCAGCCCAGTTCTGTTTTAGAGT...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 2 (lower is better)
Translates to: SQLRSQTIKINTALFHLIRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR TCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 2 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: LSQLRSQTIKINTALFHLRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 2 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGCAAAGCAAGCACTGTaGAGAAATACACATAAATAT +
Preference number: 2 (lower is better)
Translates to: KYAFPRADVSVPEFPSPFAKQAL*RNTHKY
Trigger: ATATTTATGTGTATTTCTCCACAGTGCTTGCTTTGC...AAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: SPLSQLRSQTIKINTALFVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: RSQTIKINTALFHLISEFVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 2 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTACTCTAAAACAGAACTaGGCTGAATCTGAAAGTTAT +
Preference number: 2 (lower is better)
Translates to: HLRYYLNFGHHCCSGCCSTLKQN*AESESY
Trigger: ATAACTTTCAGATTCAGCCCAGTTCTGTTTTAGAGT...ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp GCCTTGCAGGTGACCACTGCTGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTG +
Preference number: 3 (lower is better)
Translates to: ALQVTTAEGAGV*VAGGAATWQIL
Trigger: CAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGCAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GLSGWRGRHLADSERFGHWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 3 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: GGLSGWRGRHLADSERFGSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: RGFQIHARTWWWPPDWPARAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: GRHLADSERFGHQAPWTLLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGATCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 3 (lower is better)
Translates to: HLADSERFGHQAPWTLFRGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 72 bp CGGCTGGAGTCCCCTGCTCCTGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGCTCACCTGGATTTCCT +
Preference number: 3 (lower is better)
Translates to: RLESPAPALFMN*SGLGDCSPGFP
Trigger: AGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCCAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 72 bp CTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGGGAACCAGTAATCAGT +
Preference number: 3 (lower is better)
Translates to: LDRFRADPGGRA*WQDAGREPVIS
Trigger: ACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 72 bp GATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAACCAGTAATCAGTCCT +
Preference number: 3 (lower is better)
Translates to: DRFRADPGGRAC*QDAGREPVISP
Trigger: AGGACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 72 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCT +
Preference number: 3 (lower is better)
Translates to: IYSQLVGVALWG*IVSGQTQEEGP
Trigger: AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 3 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: ALASILKTGPAICWAESSWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: ALASILKTGPAICWAESSQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAATGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: SAPLETASHTKTARRSLHWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: TQALASILKTGPAICWAEQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR GCA 72 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTCTCACACCAAGACTGC +
Preference number: 3 (lower is better)
Translates to: VGSAGGWNLRLI*TLGNSFSHQDC
Trigger: GCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 72 bp GGCAGACCCAGGAGGAAGGGCCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAGTCCTTCCGGGAATTT +
Preference number: 3 (lower is better)
Translates to: GRPRRKGLLARC*QGTSNQSFREF
Trigger: AAATTCCCGGAAGGACTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGGGTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCATGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 3 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 3 (lower is better)
Translates to: LETASHTKTARRSLHEVKGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 72 bp TGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCAAGACTGCCCGGAGAA +
Preference number: 3 (lower is better)
Translates to: CRRLEPKAHLHP*KQLLTPRLPGE
Trigger: TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 72 bp CTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: LASILKTGPAIC*AESSLLSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 72 bp ATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAA +
Preference number: 3 (lower is better)
Translates to: ISIYSQLVGVAL*GWIVSGQTQEE
Trigger: TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 3 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGGCCACTGTCACAGGGTaGGTGATTTTCACTCTCTGG +
Preference number: 3 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWATVTG*VIFTLW
Trigger: CCAGAGAGTGAAAATCACCAACCCTGTGACAGTGGC...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCATCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: TQALASILKTGPAICWAELPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 72 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTGCTGAGTGAGCCTGCT +
Preference number: 3 (lower is better)
Translates to: ALASILKTGPAI*WAESSLLSEPA
Trigger: AGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR GCA 72 bp CCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTCCCATTGGTCCTGGCA +
Preference number: 3 (lower is better)
Translates to: PALFMNCSGLGD*SPGFPFPLVLA
Trigger: TGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 72 bp CCAGGCACCTTGGACTCTCTTCCGGAGGAGTTAGCTTaGTTCAGTCGGCCTCCGGAAAGCATGAAGAGGTTT +
Preference number: 3 (lower is better)
Translates to: PGTLDSLPEELA*FSRPPESMKRF
Trigger: AAACCTCTTCATGCTTTCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492389.6
3UTR-3UTR CAA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACACAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCACAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 3 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGAGACTGTAAGCCATTaGAGGGCAAGGGCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLETVSH*RARAVS
Trigger: AGACACAGCCCTTGCCCTCAAATGGCTTACAGTCTC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CAA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGCCACAAGAAATCCTTTaGCTCGAGTCTTCAGCATTA +
Preference number: 3 (lower is better)
Translates to: HLADSERFGHQAPWTLFRPQEIL*LESSAL
Trigger: TAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGG...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CAA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 3 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 3 (lower is better)
Translates to: TQALASILKTGPAICWAESGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp GGGACAGAAGATAACGAGCTTTCTGGGTCTCCAGAATaGCAGACTAGCACTGAGTGGCCACCACAGTGGGCA +
Preference number: 3 (lower is better)
Translates to: GTEDNELSGSPE*QTSTEWPPQWA
Trigger: TGCCCACTGTGGTGGCCACTCAGTGCTAGTCTGTCATTCTGGAGACCCAGAAAGCTCGTTATCTTCTGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp CTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: LSSGGVSLVQSARMICRPLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...GGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: ALASILKTGPAICWAESSFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAACTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 3 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGCAAGGGCTGTGTCTTaGGGTACTTCGCTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCARAVS*GTSLLA
Trigger: TGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTGC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CAA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGATGTGCAGCGCTTCCTTaGTCTTTTCTGTTTTGTAAC +
Preference number: 3 (lower is better)
Translates to: TWQILSASGTRHLGLSSGCAALP*SFLFCN
Trigger: GTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACA...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CAA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAACCAGAAAATATCTGTaGTTACATGGGATTCTGAGA +
Preference number: 3 (lower is better)
Translates to: LVGVALWGWIVSGQTQEETRKYL*LHGILR
Trigger: TCTCAGAATCCCATGTAACAACAGATATTTTCTGGT...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CAA 90 bp CATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 3 (lower is better)
Translates to: HEEVFKSTLAHGGGRLTGMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...GCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp AGAGCTCACTCAGCAGGAAGTGACCTTTCCCTCCTCTaGGCCTCTATAGCACTCGGCTTACAACTCACAAGG +
Preference number: 3 (lower is better)
Translates to: RAHSAGSDLSLL*ASIALGLQLTR
Trigger: CCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGGAGGGAAAGGTCACTTCCTGCTGAGTGAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR TCA 72 bp CTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCCTaGAGGGAGCAAGAAAGAAGGAACAGAGCTGCAAGA +
Preference number: 3 (lower is better)
Translates to: LSSGGVSLVQSA*REQERRNRAAR
Trigger: TCTTGCAGCTCTGTTCCTTCTTTCTTGCTCCCTTCAGGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR CCA 72 bp GCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGT +
Preference number: 3 (lower is better)
Translates to: AAGRGSQDKVCL*YGALLSSLALC
Trigger: ACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR CCA 72 bp TGCTCTTCCTGTATCCCCACAATCAGAGATGCTGGCTaGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTC +
Preference number: 3 (lower is better)
Translates to: CSSCIPTIRDAG*LSTRAISVQRF
Trigger: GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGTGGGGATACAGGAAGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
3UTR-3UTR CAA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 3 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTATGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 3 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: ELETGTGKRPIPYICHGLQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: NNREETRACHTSGFYGHLQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACAATCAGAGATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCGAGACTGTAAGCCATTaGAGGGCAAGGGCTGTGTCT +
Preference number: 3 (lower is better)
Translates to: TIRDAGWLSTRAISVQRFETVSH*RARAVS
Trigger: AGACACAGCCCTTGCCCTCAAATGGCTTACAGTCTC...GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
3UTR-3UTR CAA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGCCAAGATCATCCCATaGCATTCCAGCCTGGGTGAC +
Preference number: 3 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEAKIIP*HSSLGD
Trigger: GTCACCCAGGCTGGAATGCAATGGGATGATCTTGGC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR-3UTR CAA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: VNNREETRACHTSGFYGHQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675813.1
3UTR-3UTR CAA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTCTCTGGTCATCAAGTaGAGGCCAACACAAGGACAT +
Preference number: 3 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQSLVIK*RPTQGH
Trigger: ATGTCCTTGTGTTGGCCTCAACTTGATGACCAGAGA...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR GCA 72 bp AGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAGGGTaGTTGAGAATATACAAGAACCCTGCGGTGGTGACT +
Preference number: 3 (lower is better)
Translates to: SLQCCKTETQRG*LRIYKNPAVVT
Trigger: AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR CCA 72 bp GGCAGAGACAGGGTAATAACACCCCCAGCAGCTCTCTaGGTACTTCCTGTAGAGGGAGATCTAAAAACCTCA +
Preference number: 3 (lower is better)
Translates to: GRDRVITPPAAL*VLPVEGDLKTS
Trigger: TGAGGTTTTTAGATCTCCCTCTACAGGAAGTACCCAGAGAGCTGCTGGGGGTGTTATTACCCTGTCTCTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 72 bp GCTCACCTGGATTTCCTTTCCCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCAT +
Preference number: 3 (lower is better)
Translates to: AHLDFLSHWSWQ*FQHQGLKLQNH
Trigger: ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGGTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: SPLSQLRSQTIKINTALFQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 3 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp GTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCCTCTTCACCTTGTGTG +
Preference number: 3 (lower is better)
Translates to: VFLSKGLRGCQP*QRTSESSSPCV
Trigger: CACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR TCA 72 bp CTTCCTGTAGAGGGAGATCTAAAAACCTCAGGGTTTTaGATGCCTCGCCCACAAAGGCAGGATACACAAGGG +
Preference number: 3 (lower is better)
Translates to: LPVEGDLKTSGF*MPRPQRQDTQG
Trigger: CCCTTGTGTATCCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTTAGATCTCCCTCTACAGGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp GAAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTaGATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGG +
Preference number: 3 (lower is better)
Translates to: EIRIPQSRCFSS*ISIAFCAGKRR
Trigger: CCTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp CCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTCTTCCAGCCTTTGAAT +
Preference number: 3 (lower is better)
Translates to: PIGPGSGFSIRV*SCRIIVFQPLN
Trigger: ATTCAAAGGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 72 bp CTGTGGTTTGGAAAGTGTCCCTTAATCAGCCTGCAGTaGTGCAAAACAGAAACCCAGAGAGGGTGCTTGAGA +
Preference number: 3 (lower is better)
Translates to: LWFGKCPLISLQ*CKTETQRGCLR
Trigger: TCTCAAGCACCCTCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAACCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR GCA 72 bp TTTGCCCGTTTTCCAAAGGTTTGGTCAGCTTACTCCTaGTCTTCCTGTATCCCCACAATCAGAGATGCTGGC +
Preference number: 3 (lower is better)
Translates to: FARFPKVWSAYS*SSCIPTIRDAG
Trigger: GCCAGCATCTCTGATTGTGGGGATACAGGAAGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACGGGCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR CAA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 3 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 3 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPELVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: NNREETRACHTSGFYGHLLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCAAAGCCAGAGCATTTaGGCATTAGCAAAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: SWAMGVITDILTTSEGRFQSQSI*ALAKAE
Trigger: TTCAGCCTTTGCTAATGCCAAAATGCTCTGGCTTTG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGAGAAGTGGCCTCTCTTaGCCTCACATTTTACCAGGT +
Preference number: 3 (lower is better)
Translates to: EQMFQFLNFHRLLCRQAERSGLS*PHILPG
Trigger: ACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCT...CTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: VNNREETRACHTSGFYGHREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp ATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAACAACACAGAGAGACCC +
Preference number: 3 (lower is better)
Translates to: MKRWQGQAHGQM*LKYLQNNTERP
Trigger: GGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR TCA 72 bp TCACTTAATTTCTACCCGAACCTCAGTCTCCTCATCTaGAAATGGGGGTGCCTGCCTCATCAGACTGTTGTG +
Preference number: 3 (lower is better)
Translates to: SLNFYPNLSLLI*KWGCLPHQTVV
Trigger: CACAACAGTCTGATGAGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAGGTTCGGGTAGAAATTAAGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp GGCAGGGAACCAGTAATCAGTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCTCCGGAAAGCATGAAG +
Preference number: 3 (lower is better)
Translates to: GREPVISPSGNF*AKTFRPPESMK
Trigger: CTTCATGCTTTCCGGAGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGGACTGATTACTGGTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 72 bp CGAACCTCAGTCTCCTCATCTGAAAATGGGGGTGCCTaGCTCATCAGACTGTTGTGGAAATTAAATGGGTCA +
Preference number: 3 (lower is better)
Translates to: RTSVSSSENGGA*LIRLLWKLNGS
Trigger: TGACCCATTTAATTTCCACAACAGTCTGATGAGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAGGTTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 72 bp ACAGTTCTCAGGCTGGCTCCTGGCTTTTCAAACCCTTaGTCAGAGACTGAAGGCAAACCTGAGTCACTTAAT +
Preference number: 3 (lower is better)
Translates to: TVLRLAPGFSNP*SETEGKPESLN
Trigger: ATTAAGTGACTCAGGTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: VNNREETRACHTSGFYGHLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: CISKQGLTRLSALTKDFGLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: RLKYAVNNREETRACHTSGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 3 (lower is better)
Translates to: LKYAVNNREETRACHTSGREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CTTCCTTTGTCTTTTCTGTTTTGTAACTGTCACTCCGAGACTGTAAGCCATTTGGCAAGGGCTGTGTCTTaGGGTACTTCGCTCCTCGCA +
Preference number: 3 (lower is better)
Translates to: LPLSFLFCNCHSETVSHLARAVS*GTSLLA
Trigger: TGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTGC...CAAATGGCTTACAGTCTCGGAGTGACAGTTACAAAACAGAAAAGACAAAGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
3UTR-3UTR CAA 90 bp CAGAGGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCTGTGCAGCGCTTCCTTaGTCTTTTCTGTTTTGTAAC +
Preference number: 3 (lower is better)
Translates to: QRPCLLCTSSTYCTVEVSCAALP*SFLFCN
Trigger: GTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACA...GGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469826.2
3UTR-3UTR CAA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCACAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: GERKVLTDYLQSRARRWSQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTATGTCCCTGGTTTGTTaGATTTCTAAAGCATCGGAA +
Preference number: 3 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCMSLVC*ISKASE
Trigger: TTCCGATGCTTTAGAAATCAAACAAACCAGGGACAT...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp TGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCACTGTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: CSRQSCNWVTVSSNNVALFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...CAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp TCCTTTAAAAGATGCAGCCCATCCGTCCACAGCATTTaGGAAGTGGCCTCTCTTTGCCTCACATTTTACCAG +
Preference number: 3 (lower is better)
Translates to: SFKRCSPSVHSI*EVASLCLTFYQ
Trigger: CTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGATGGGCTGCATCTTTTAAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 3 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 3 (lower is better)
Translates to: SGVLKRGRTFICLSETKSQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATTATGGAGAAGTTCTCTaGGCTTGGAAGAGCAGAAAG +
Preference number: 3 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNYGEVL*AWKSRK
Trigger: CTTTCTGCTCTTCCAAGCCAAGAGAACTTCTCCATA...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR CAA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAAAGGCACGAACTCAGTaGCTAAGAGACAACTCCATG +
Preference number: 3 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSKARTQ*LRDNSM
Trigger: CATGGAGTTGTCTCTTAGCAACTGAGTTCGTGCCTT...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR CAA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 3 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 3 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 3 (lower is better)
Translates to: SQLRSQTIKINTALFHLISGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp CTGGCCATAATTTCTGTCCATCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTCATAACTGATATACTG +
Preference number: 3 (lower is better)
Translates to: LAIISVHLTWMD*SWAMGVITDIL
Trigger: CAGTATATCAGTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR GCA 72 bp GACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAATTTATTCCTCAGTCCC +
Preference number: 3 (lower is better)
Translates to: DRQFSVGFSEAG*HDKEHNLFLSP
Trigger: GGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 72 bp CTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCTGAAAAGAGGAAGAAC +
Preference number: 3 (lower is better)
Translates to: LSSAEVSGNDPT*EMLRGSEKRKN
Trigger: GTTCTTCCTCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 72 bp ACCTACCTTACTAGACAGAAAGCCAAGGACTATTTATaGGCACGTACACACACACACACACACACACGTATG +
Preference number: 3 (lower is better)
Translates to: TYLTRQKAKDYL*ARTHTHTHTRM
Trigger: CATACGTGTGTGTGTGTGTGTGTGTGTACGTGCCCATAAATAGTCCTTGGCTTTCTGTCTAGTAAGGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR-3UTR CAA 90 bp AAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: KYAFPRADVSVPEFPSPFLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...AAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp GGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCTCATCTTCAATTTCAG +
Preference number: 3 (lower is better)
Translates to: GSRKYLVRGSIQ*VYSYFPHLQFQ
Trigger: CTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR GCA 72 bp TACCAGGTGCTTCAGGATGTTACACAGGTGAGAATTTaGTTCTGTACAGAACAAAGAGGATCAGCAACAGAG +
Preference number: 3 (lower is better)
Translates to: YQVLQDVTQVRI*FCTEQRGSATE
Trigger: CTCTGTTGCTGATCCTCTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGTAACATCCTGAAGCACCTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 3 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp TTTGAGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTATTATATTCCACACATTaGCGGTGTTTCCTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: FEKWPLFASHFTRCFRMLLYSTH*RCFLGK
Trigger: TTTCCCCAGGAAACACCGCAAATGTGTGGAATATAA...TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR-3UTR CAA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: RSQTIKINTALFHLISEFFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR-3UTR CAA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 3 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR TCA 72 bp GCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATTCCTCAGTCCCTTATC +
Preference number: 3 (lower is better)
Translates to: AIFSGLFRSWLP*QRAQFIPQSLI
Trigger: GATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CCA 72 bp CTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATAATTTCTGTCCATCTA +
Preference number: 3 (lower is better)
Translates to: LHLVCPQLSNQS*YFQLAIISVHL
Trigger: TAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR-3UTR CAA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAAAAGCAAGTGATTTaGTGCAGCAGTAATCTAAAG +
Preference number: 3 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNEKQVI*CSSNLK
Trigger: CTTTAGATTACTGCTGCACAAAATCACTTGCTTTTC...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR TCA 72 bp GAAGCCTGCATGTCTTCTAATCTCTGGTCATCAAGTTaGGGCCAACACAAGGACATGAAATCTTTCTTAACT +
Preference number: 3 (lower is better)
Translates to: EACMSSNLWSSS*GQHKDMKSFLT
Trigger: AGTTAAGAAAGATTTCATGTCCTTGTGTTGGCCTCAACTTGATGACCAGAGATTAGAAGACATGCAGGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR GCA 72 bp TATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTaGTGTAGTTGTACATCGATGAAGCACCTTCTGTCT +
Preference number: 3 (lower is better)
Translates to: YYLNFGHHCCSG*CSCTSMKHLLS
Trigger: AGACAGAAGGTGCTTCATCGATGTACAACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR GCA 72 bp GTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATC +
Preference number: 3 (lower is better)
Translates to: VILLPVSSLDLI*WYLGFCGILFI
Trigger: GATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR-3UTR CAA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGAAAATTGGGCATGGCTaGACATCTGAACAATGTCCC +
Preference number: 3 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKKIGHG*TSEQCP
Trigger: GGGACATTGTTCAGATGTCAAGCCATGCCCAATTTT...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp GGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTaGGACAAAGTCTTTACTTCCAGGGTTTGCCTTGCA +
Preference number: 3 (lower is better)
Translates to: GSEKRKNIYLPK*DKVFTSRVCLA
Trigger: TGCAAGGCAAACCCTGGAAGTAAAGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
3UTR GCA 72 bp TCGAAAACACATAAAATCATGCACCGAATCCTGTTCTaGCTGAATTCAAGGCTGACAAATTTCCACCATTAC +
Preference number: 3 (lower is better)
Translates to: SKTHKIMHRILF*LNSRLTNFHHY
Trigger: GTAATGGTGGAAATTTGTCAGCCTTGAATTCAGGCAGAACAGGATTCGGTGCATGATTTTATGTGTTTTCGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 72 bp GCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTATaGGGAAACATGACAGGCTCCTCATTAAAGCTATGT +
Preference number: 3 (lower is better)
Translates to: AKAELSSQAINL*GNMTGSSLKLC
Trigger: ACATAGCTTTAATGAGGAGCCTGTCATGTTTCCCCATAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CCA 72 bp ATACTGTTACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGA +
Preference number: 3 (lower is better)
Translates to: ILLPVSSLDLIC*YLGFCGILFIR
Trigger: TCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
3UTR TCA 72 bp AATACAAAGCCAGAGCATTTTGGCATTAGCAAAGGCTaGACTAAGTTCTCAGGCAATAAATTTATGGGGAAA +
Preference number: 3 (lower is better)
Translates to: NTKPEHFGISKG*TKFSGNKFMGK
Trigger: TTTCCCCATAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTGGCTTTGTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp GGAATCGAAAACTTTCCAAGAAGGAATCTGAAGGTCTaGTGCTTAACTCCTCAATTTTACCTGAGATATACT +
Preference number: 3 (lower is better)
Translates to: GIENFPRRNLKV*CLTPQFYLRYT
Trigger: AGTATATCTCAGGTAAAATTGAGGAGTTAAGCATCAGACCTTCAGATTCCTTCTTGGAAAGTTTTCGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR TCA 72 bp AAAATTACCTACGTATTTCTTCCTAGCCTAGGACTCTaGTTTCACTTACATTCCACAAGGGAATTAGAGAAA +
Preference number: 3 (lower is better)
Translates to: KITYVFLPSLGL*FHLHSTRELEK
Trigger: TTTCTCTAATTCCCTTGTGGAATGTAAGTGAAATCAGAGTCCTAGGCTAGGAAGAAATACGTAGGTAATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR TCA 72 bp ATTATACCAGAAAATATCTGTTGTTACATGGGATTCTaGGAATTCCACAAGAAATCCTTTTGCTCGAGTCTT +
Preference number: 3 (lower is better)
Translates to: IIPENICCYMGF*EFHKKSFCSSL
Trigger: AAGACTCGAGCAAAAGGATTTCTTGTGGAATTCTCAGAATCCCATGTAACAACAGATATTTTCTGGTATAAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LADSERFGHQAPWTLFRREGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GRHLADSERFGHQAPWTLARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GLSGWRGRHLADSERFGHGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: GAATWQILSASGTRHLGLCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTCACAAGTACTGGCGTaGGTACGCGGGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPSQVLA*VRGERS
Trigger: CGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGA...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR TCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GRHLADSERFGHQAPWTLAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LADSERFGHQAPWTLFRRARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: GLSGWRGRHLADSERFGHGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: GLSSGGVSLVQSARMICREGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGAGTCCCCTGCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCATGAGCCTTTTCCGGTaGGCCCGCCCCCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: GVPCSCVVYELLRARRLLMSLFR*ARPLRL
Trigger: GAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCAT...GAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GGLSGWRGRHLADSERFGHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: RGFQIHARTWWWPPDWPAHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGGCTGTGTCTTTGGGTACTTCGCTCCTCGCAGTCACAAGTACTGGCGTGCGTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: RAVSLGTSLLAVTSTGVRGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...ACGCACGCCAGTACTTGTGACTGCGAGGAGCGAAGTACCCAAAGACACAGCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp CTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSSGGVSLVQSARMICRPGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...GGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: GWRGRHLADSERFGHQAPNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGAGTCCCCTGCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: GVPCSCVVYELLRARRLLCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TWQILSASGTRHLGLSSGVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAACTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LVGVALWGWIVSGQTQEELTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCATGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: FSAGRGGPLGLDRFRADPWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...TGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SCVVYELLRARRLLTWISARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...GGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: VVYELLRARRLLTWISFPERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...GGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAAGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PFPLVLAVVSASGSEAAEERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...TTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: GGLSGWRGRHLADSERFGSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RTWWWPPDWPAFHHRHTEGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTTTTGTTCTCTGGGCTaGGGCTCGCCGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLFCSLG*GSPAPA
Trigger: GGCTGGAGCCGGCGAGCCCCAGCCCAGAGAACAAAA...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCAAGACGCCGCTCAATaGTTGCCAAGGGCAACGCGG +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQQDAAQ*LPRATR
Trigger: CCGCGTTGCCCTTGGCAACCATTGAGCGGCGTCTTG...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCACCCTCTTCTCCGATTaGCCCGTCTTCCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEATLFSD*PVFPGR
Trigger: CCGGCCGGGGAAGACGGGCCAATCGGAGAAGAGGGT...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GRHLADSERFGHQAPWTLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGTTTCACATAACTCCTaGCTCCTTTCAGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQVSHNS*LLSASM
Trigger: CATGCTGGCTGAAAGGAGTCAGGAGTTATGTGAAAC...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp TTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: FSAGRGGPLGLDRFRADPALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCATTGGTCCTGCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NCSGLGDCSPGFPFPLVLPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...CAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SAPLETASHTKTARRSLHARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACAGGCCTTTTGTTCTCTaGGCTGGGGCTCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHRPFVL*AGARRL
Trigger: GAGCCGGCGAGCCCCAGCCCAGAGAACAAAAGGCCT...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCCAAGACGCCGCTCAATaGTTGCCAAGGGCAACGCGG +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFQDAAQ*LPRATR
Trigger: CCGCGTTGCCCTTGGCAACCATTGAGCGGCGTCTTG...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTCAGTCTCCTCATCTaGAAATGGGGGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQLSLLI*KWGCLP
Trigger: AGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAG...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGGGTGGGACTGAAGGATaGTCAGCCTTTGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRGGTEG*SAFEVP
Trigger: TGGGACTTCAAAGGCTGATCATCCTTCAGTCCCACC...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: RGFQIHARTWWWPPDWPASGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGATTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCGGGGAGACGGAGGTTaGAGTGAGCCAAGATCATCC +
Preference number: 4 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADRGDGG*SEPRSS
Trigger: GGATGATCTTGGCTCACTGCAACCTCCGTCTCCCCG...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CCA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GRHLADSERFGHQAPWTLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: VFKSTLAHGGGRLTGQPFWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...GAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAACACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PFPLVLAVVSASGSEAAEHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...TTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SCVVYELLRARRLLTWISIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...GGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCGGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: PESMKRFSNPRSHMVVAAGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...GGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: GGRLTGQPFIIVIQNDDLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCCTTTGTCTTGGCGGCGGAAGTCGCTaGCTGCTCTTCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: DAGWLSTRAISVQRFLCLGGGSR*LLFPAH
Trigger: GTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCC...AAGACAAAGGAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR CCA 90 bp TGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTGTCTTCCAGCCGGCGGCGGAAGTCGCTaGCTGCTCTTCCCTGCCCAC +
Preference number: 4 (lower is better)
Translates to: WQWFQHQGLKLQNHCLPAGGGSR*LLFPAH
Trigger: GTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCC...GGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR TCA 90 bp CCGGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PESMKRFSNPRSHMVVAALLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...GGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTCCGTCCACAGCATTTaGGAAGTGGCCTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSSVHSI*EVASLC
Trigger: GCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGA...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGATGGGGGTGGTGTGTaGCCTTTGCGTGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGDGGGV*PLRAEF
Trigger: AAATTCAGCACGCAAAGGTCACACACCACCCCCATC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAEPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFSAGRGGPLGLDRFRADSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...GTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: GGLSGWRGRHLADSERFGFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000674539.1
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATGGACTGAAGGGCACATaGTCTGAAGAGTTGAGCGGC +
Preference number: 4 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHGLKGT*SEELSG
Trigger: GCCGCTCAACTCTTCAGAGCATGTGCCCTTCAGTCC...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000477003.6
CDS-3UTR CCA 90 bp TCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SCVVYELLRARRLLTWISEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...GGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: GSQDKVCLWYGALLSSLAHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCACACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTTGGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SSGGVSLVQSARMICRPLGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...CAAGGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACCAGTCTCCTGTGGCTCCCCCAAATCATCTCGACAGAAAAGAAGAGAGAAGTTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TSLLWLPQIISTEKKREVGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AACTTCTCTCTTCTTTTCTGTCGAGATGATTTGGGGGAGCCACAGGAGACTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LVGVALWGWIVSGQTQEEGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCATTGGTCCTGGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NCSGLGDCSPGFPFPLVLGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...CAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGAGTCCCCTGCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GVPCSCVVYELLRARRLLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...GAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGACTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LADSERFGHQAPWTLFRRLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: GSQDKVCLWYGALLSSLAAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LSSGGVSLVQSARMICRPCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...GGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGCTGCAGAATCATTGTCTTCCAGCCTTTGAATCTCCTCAGCTGTCACTTCCAGGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: SCRIIVFQPLNLLSCHFQARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...CTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IYSQLVGVALWGWIVSGQYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: IYSQLVGVALWGWIVSGQLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACAGCTAGTCAACCCCTaGGACGCTGGTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPQLVNP*DAGRKP
Trigger: TGGCTTCCTACCAGCGTCTCAGGGGTTGACTAGCTG...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTATACCAAGCCCAATATaGTCGTGCTGGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGIPSPI*SCWSWL
Trigger: TAGCCAGGACCAGCACGATCATATTGGGCTTGGTAT...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTAAAACCTCAGGGTTTTaGATGCCTCGCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGKTSGF*MPRPQR
Trigger: CCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTT...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCATGCTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LAAGRGSQDKVCLWYGALHALKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGCATG...CAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477003.6
CDS-3UTR GCA 90 bp CCGGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PESMKRFSNPRSHMVVAASGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...GGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: HEEVFKSTLAHGGGRLTGAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...GCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCCTTTGTCTTCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: DAGWLSTRAISVQRFLCLPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...AAGACAAAGGAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR GCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCACGCCGCTCAATGGTTaGCAAGGGCAACGCGGGACG +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVATPLNG*QGQRGT
Trigger: CGTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGT...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: GGLSGWRGRHLADSERFGTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: SQDKVCLWYGALLSSLALARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...AAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAATCAGAGATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: TIRDAGWLSTRAISVQRFIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: HLADSERFGHQAPWTLFRSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: LAAGRGSQDKVCLWYGALGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...CAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCCCCAGCAGCTCTCTaGGTACTTCCTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKPPAAL*VLPVEG
Trigger: TCCCTCTACAGGAAGTACCCAGAGAGCTGCTGGGGG...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAAGGGCTGTGTCTTTaGGTACTTCGCTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: HEEVFKSTLAHGGGRLTGQGLCL*VLRSSQ
Trigger: CTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTG...GCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTGGGTGGATCACTTGTaGCCAGAAGTTCGAGACCAG +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLWVDHL*PEVRDQ
Trigger: CTGGTCTCGAACTTCTGGCCACAAGTGATCCACCCA...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCGGAGGAGTTAGCTTaGTTCAGTCGGCCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFPEELA*FSRPPE
Trigger: TTCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGG...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492389.6
3UTR CAA 72 bp AATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGA +
Preference number: 4 (lower is better)
Translates to: NLHLFSAGRGGP*GLDRFRADPGG
Trigger: TCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGATTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: TWQILSASGTRHLGLSSGFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTTGCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SSGGVSLVQSARMICRPLPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...CAAGGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGACACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: TWQILSASGTRHLGLSSGHLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTG...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCAGGATGATCAGCCTTTaGAGTCCCAAGCAGAGTATC +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSRMISL*SPKQSI
Trigger: GATACTCTGCTTGGGACTTCAAAGGCTGATCATCCT...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCAAGATCTTACTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFKILLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGTAAGATCTT...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGGTAGGAGGATCCCCTaGGCCCAGGAAGGGGAGGTT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTGRRIP*AQEGEV
Trigger: AACCTCCCCTTCCTGGGCTCAGGGGATCCTCCTACC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RGFQIHARTWWWPPDWPAFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GLSSGGVSLVQSARMICRGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCATCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVACWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: VFKSTLAHGGGRLTGQPFVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCAATAACATGAGCCTTTTCCGGTaGGCCCGCCCCCTCCGGCTC +
Preference number: 4 (lower is better)
Translates to: PCLLCTSSTYCTVEVSNNMSLFR*ARPLRL
Trigger: GAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCAT...GTTATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR GCA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGATTTCATCAGATATCCTaGTCTTCCTGTATCCCCACA +
Preference number: 4 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGFHQIS*SSCIPT
Trigger: TGTGGGGATACAGGAAGAGCAGGATATCTGATGAAA...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCACGCCGCTCAATGGTTaGCAAGGGCAACGCGGGACG +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVATPLNG*QGQRGT
Trigger: CGTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGT...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCATTGGTCCTGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: NCSGLGDCSPGFPFPLVLHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEARRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGAEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LADSERFGHQAPWTLFRRGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGIARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAATCAGAGATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: TIRDAGWLSTRAISVQRFGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTTCCAGGCTTTCTGACTaGAGAGCTGAGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFSRLSD*RAEAPC
Trigger: GCAGGGGGCCTCAGCTCTCCAGTCAGAAAGCCTGGA...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GGCAGAGGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCGCAGTCACAAGTACTaGCGTGCGTACGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: GRGLVFFVRLAPTAPWKFRSHKY*RAYAGR
Trigger: TCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCG...AAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCCTCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATTTTGTTCTCTGGGCTaGGGCTCGCCGGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQFCSLG*GSPAPA
Trigger: GGCTGGAGCCGGCGAGCCCCAGCCCAGAGAACAAAA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAATCAGAGATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: TIRDAGWLSTRAISVQRFFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR TCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATAGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFIEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGAGGGAGCGGGGGTTTaGGTGGCTGGCGGGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDEGAGV*VAGGAA
Trigger: GGCGGCCCCGCCAGCCACTCAAACCCCCGCTCCCTC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGCTGCAGAATCATTGTCTTCCAGCCTTTGAATCTCCTCAGCTGTCACTTCCAGGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: SCRIIVFQPLNLLSCHFQAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...CTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGCATGGCTTGACATCTaGACAATGTCCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFAWLDI*TMSLVC
Trigger: ACAAACCAGGGACATTGTTCAGATGTCAAGCCATGC...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTACTCCAAAGTTGTCTaGCGATGGGAACGCAGAATC +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFYSKVV*RWERRI
Trigger: GATTCTGCGTTCCCATCGTCAGACAACTTTGGAGTA...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTCCCTGCGGTGGTGACTaGACAAAACGCAGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTPCGGD*TKRSQG
Trigger: TCCCTGGCTGCGTTTTGTTCAGTCACCACCGCAGGG...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR TCA 90 bp GCACCGTGGAAGTTTCCAATAACGTTTGTTGAAACTGCCACAAATGCAGCAGGGTCTTCCCTGCCCACATaGGCCTTTTCCGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: APWKFPITFVETATNAAGSSLPT*AFSGAP
Trigger: GGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGA...CCCTGCTGCATTTGTGGCAGTTTCAACAAACGTTATTGGAAACTTCCACGGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR TCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTGAAGGGCACATGCTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSEGHML*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGCATGTGCCCTTC...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477003.6
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGGTTCAGTCGGCCTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPGSVGL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGGCCGACTGAACC...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000674539.1
CDS-3UTR GCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATACTCCAAAGTTGTCTGACGATGGGAACGCAGAATCGGAACAAGGAGGGAAGACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: ILQSCLTMGTQNRNKEGRPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TCTTCCCTCCTTGTTCCGATTCTGCGTTCCCATCGTCAGACAACTTTGGAGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCATTGGTCCTGTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: NCSGLGDCSPGFPFPLVLFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...CAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RGFQIHARTWWWPPDWPATQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGATGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: SAPLETASHTKTARRSLHTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCCTCAGGGTTTTGAATaGCTCGCCCACAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVPQGFE*LAHKGR
Trigger: CCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTCTGGCTGCTCTTCCCTaGCCACATGAGCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: GGRLTGQPFIIVIQNDDLLAALP*PHEPFP
Trigger: CGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAG...AAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR GCA 90 bp CAGAGGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCTCACAAGTACTGGCGTaGGTACGCGGGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: QRPCLLCTSSTYCTVEVSSQVLA*VRGERS
Trigger: CGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGA...GGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CCA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LVGVALWGWIVSGQTQEEDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GLSSGGVSLVQSARMICRHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSREELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGAWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTTGCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: SSGGVSLVQSARMICRPLLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...CAAGGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGGGGGTTTGAGTGGCTaGCGGGGCCGCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTGGLSG*RGRHLA
Trigger: TGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACACACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTGGGCACAGGCCGGTGTaGTGGCCAGGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFGHRPV*WPGLSH
Trigger: ATGGGAAAGCCCTGGCCACCACACCGGCCTGTGCCC...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: LSGWRGRHLADSERFGHQVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCCCCCAGCAGCTCTCTaGGTACTTCCTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFPPAAL*VLPVEG
Trigger: TCCCTCTACAGGAAGTACCCAGAGAGCTGCTGGGGG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCGCAGTCACAAGTACTaGCGTGCGTACGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLRSHKY*RAYAGR
Trigger: TCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTCAAGGGCTGTGTCTTTaGGTACTTCGCTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTQGLCL*VLRSSQ
Trigger: CTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTG...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAAGGCCTTTTGTTCTCTaGGCTGGGGCTCGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKRPFVL*AGARRL
Trigger: GAGCCGGCGAGCCCCAGCCCAGAGAACAAAAGGCCT...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: IYSQLVGVALWGWIVSGQLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: EQMFQFLNFHRLLCRQAELLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...CTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCACTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTGTCTTCCAGCCCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: WQWFQHQGLKLQNHCLPAPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...GGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: GAVRIRFVFGMGLCFLHWCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: GLSSGGVSLVQSARMICRRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCATATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGACGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAATCCGTCCACAGCATTTaGGAAGTGGCCTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGESVHSI*EVASLC
Trigger: GCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGA...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCTCAGTCTCCTCATCTaGAAATGGGGGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFLSLLI*KWGCLP
Trigger: AGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTCTTCCCTGCCCACATaGGCCTTTTCCGGTGCGCCC +
Preference number: 4 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGISSLPT*AFSGAP
Trigger: GGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGA...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR TCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGGAGGCAGGATTGCTTaGGCCCAGGAGTTCCGGACC +
Preference number: 4 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNGGRIA*AQEFRT
Trigger: GGTCCGGAACTCCTGGGCTCAAGCAATCCTGCCTCC...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGCCCTTGGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSGGVSLVQSARMICRPLVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...CAAGGGCCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAAGAGCTGAGGCCCCCTaGCCTAATTGGACTGATTTC +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGERAEAP*PNWTDF
Trigger: GAAATCAGTCCAATTAGGGCAGGGGGCCTCAGCTCT...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACAACTTTGGCCATCACTaGTGTTCAGGGTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHNFGHH*CSGCCS
Trigger: ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTT...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCCACCGAATCCTGTTCTaGCTGAATTCAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAHRILF*LNSRLT
Trigger: TGTCAGCCTTGAATTCAGGCAGAACAGGATTCGGTG...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCGAAAATGGGGGTGCCTaGCTCATCAGACTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVENGGA*LIRLLW
Trigger: CCACAACAGTCTGATGAGGCAGGCACCCCCATTTTC...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGAAAATGGGGGTGCCTaGCTCATCAGACTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLENGGA*LIRLLW
Trigger: CCACAACAGTCTGATGAGGCAGGCACCCCCATTTTC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCATCACAAGTACTGGCGTaGGTACGCGGGGAGAGATCG +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSSQVLA*VRGERS
Trigger: CGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGA...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR GCA 90 bp AAGGGCTGTGTCTTTGGGTACTTCGCTCCTCGCAGTCACAAGTACTGGCGTGCGCACGTGCCATTAGTGTaGAGCGCTTCCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: KGCVFGYFAPRSHKYWRAHVPLV*SASFVF
Trigger: AAAGACAAAGGAAGCGCTGCACACTAATGGCACGTG...CGCACGCCAGTACTTGTGACTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR GCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTCCCCACAATCAGAGATaGTGGCTGGCTTTCAACACG +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTPHNQR*WLAFNT
Trigger: CGTGTTGAAAGCCAGCCAGCATCTCTGATTGTGGGG...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGCTGCAGAATCATTGTCTTCCAGCCTTTGAATCTCCTCAGCTGTCACTTCCAGGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: SCRIIVFQPLNLLSCHFQEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...CTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGATGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCACTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: SQDKVCLWYGALLSSLALGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...AAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGGGTCTGCAGGCGGCTaGAACCTAAGGCTCATCTGC +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKGSAGG*NLRLIC
Trigger: GCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCACACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTCCAGGCTTTCTGACTaGAGAGCTGAGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFSRLSD*RAEAPC
Trigger: GCAGGGGGCCTCAGCTCTCCAGTCAGAAAGCCTGGA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGAGTGGCCACCACAGTaGGCATCACATCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSEWPPQ*ASHPNF
Trigger: GAAGTTTGGATGTGATGCCCACTGTGGTGGCCACTC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGGGCTGTGTCTTTGGGTACTTCGCTCCTCGCAGTCACAAGTACTGGCGTGCGTATCAGAGATGCTGGCTaGCTTTCAACACGTGCCATT +
Preference number: 4 (lower is better)
Translates to: RAVSLGTSLLAVTSTGVRIRDAG*LSTRAI
Trigger: AATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGAT...ACGCACGCCAGTACTTGTGACTGCGAGGAGCGAAGTACCCAAAGACACAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR CCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCATTCTTGCCACTATCTaGGGTCACCTCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVILATI*GHLHCL
Trigger: GAGGCAGTGGAGGTGACCCCAGATAGTGGCAAGAAT...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCCGGAGGAGTTAGCTTaGTTCAGTCGGCCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCPEELA*FSRPPE
Trigger: TTCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGG...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000675962.1
CDS-3UTR TCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCACCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVACQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCATGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGCCAGGGCTTTCCCATaGGAGGCCCTCCTCCCCGGT +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLARAFP*EALLPG
Trigger: ACCGGGGAGGAGGGCCTCTCATGGGAAAGCCCTGGC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCATATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVALTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGCATGGCTTGACATCTaGACAATGTCCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPAWLDI*TMSLVC
Trigger: ACAAACCAGGGACATTGTTCAGATGTCAAGCCATGC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCAGCTAGTCAACCCCTaGGACGCTGGTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGQLVNP*DAGRKP
Trigger: TGGCTTCCTACCAGCGTCTCAGGGGTTGACTAGCTG...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGCCTAGCCTAGGACTCTaGTTTCACTTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWPSLGL*FHLHST
Trigger: TGTGGAATGTAAGTGAAATCAGAGTCCTAGGCTAGG...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTTCTGGGTCTCCAGAATaGCAGACTAGCACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFSGSPE*QTSTEW
Trigger: CCACTCAGTGCTAGTCTGTCATTCTGGAGACCCAGA...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTAGAACCCTGCGGTGGTaGCTGAACAAAACGCAGCCA +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTRTLRW*LNKTQP
Trigger: TGGCTGCGTTTTGTTCAGTCACCACCGCAGGGTTCT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR GCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCATCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVASGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGATGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: TWQILSASGTRHLGLSSGCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCATCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEATQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: VVYELLRARRLLTWISFPTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...GGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGAAGTGGCCTCTCTTTaGCTCACATTTTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPEVASL*LTFYQV
Trigger: CACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGTTCCATCGCCTTTTGTaGAGGCAAGCGGAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAEFHRLL*RQAEES
Trigger: ACTTTCCTCCGCTTGCCTGCACAAAAGGCGATGGAA...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCAATACTGGCTGCTCTTCCCTaGCCACATGAGCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: GLVFFVRLAPTAPWKFPILAALP*PHEPFP
Trigger: CGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAG...TATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR GCA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTGACAATGCGTGTCAGTaGATTACATGGCTGAGGGGG +
Preference number: 4 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGADNACQ*ITWLRG
Trigger: CCCCCTCAGCCATGTAATGCACTGACACGCATTGTC...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477003.6
CDS-3UTR GCA 90 bp TGCTGCAAAACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGCTGAGGAGGCAGGATTaGTTGAGCCCAGGAGTTCCG +
Preference number: 4 (lower is better)
Translates to: CCKTETQRGCLRIYKNPALRRQD*LSPGVP
Trigger: CGGAACTCCTGGGCTCAAGCAATCCTGCCTCCTCAG...CGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGTTTTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: LADSERFGHQAPWTLFRRTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GKHEEVFKSTLAHGGGRLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: LVAMTKSTIYSSVPYHSYIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...GTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCCTTTGTCTTCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: DAGWLSTRAISVQRFLCLLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...AAGACAAAGGAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCTTTTCTGTTTTGTAACTGTCACTCCGAGACTGTAAGCCATTTGAGGGCAAGGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: SFLFCNCHSETVSHLRARVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CCTTGCCCTCAAATGGCTTACAGTCTCGGAGTGACAGTTACAAAACAGAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LVAMTKSTIYSSVPYHSYHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...GTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGCCCCCTGCCCTAATTaGACTGATTTCCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPAPCPN*TDFLIH
Trigger: ATGAATCAGGAAATCAGTCCAATTAGGGCAGGGGGC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCAGACTAGCACTGAGTaGCCACCACAGTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEQTSTE*PPQWAS
Trigger: TGATGCCCACTGTGGTGGCCACTCAGTGCTAGTCTG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCAAGCATAGAGCGGAGTaGCTGAAAGAACACCCTCTG +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVKHRAE*LKEHPL
Trigger: CAGAGGGTGTTCTTTCAGCCACTCCGCTCTATGCTT...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGAAGCATAGAGCGGAGTaGCTGAAAGAACACCCTCTG +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQKHRAE*LKEHPL
Trigger: CAGAGGGTGTTCTTTCAGCCACTCCGCTCTATGCTT...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATAAGCATAGAGCGGAGTaGCTGAAAGAACACCCTCTG +
Preference number: 4 (lower is better)
Translates to: SAPLETASHTKTARRSLHKHRAE*LKEHPL
Trigger: CAGAGGGTGTTCTTTCAGCCACTCCGCTCTATGCTT...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGCTCGGGAGGCTGATGTaGGAGAATCGCTTGAACCGG +
Preference number: 4 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLLGRLM*ENRLNR
Trigger: CCGGTTCAAGCGATTCTCCCACATCAGCCTCCCGAG...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPILLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACACCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACACCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATGCAGGTGACCACTGCTaGGGGAGCGGGGGTTTGAGT +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHAGDHC*GSGGLS
Trigger: ACTCAAACCCCCGCTCCCTCAGCAGTGGTCACCTGC...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAATGCTAGGGGAAAGCTaGGTGTGGAAAAATGTGCAT +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPMLGES*VWKNVH
Trigger: ATGCACATTTTTCCACACTCAGCTTTCCCCTAGCAT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATTCTAACAGGTCTGGCTaGCCTGGCTTTCCACATATA +
Preference number: 4 (lower is better)
Translates to: SAPLETASHTKTARRSLHSNRSG*PGFPHI
Trigger: TATATGTGGAAAGCCAGGTCAGCCAGACCTGTTAGA...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCACTGTCACAGGGTTGGTaGTTTTCACTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSLSQGW*FSLSGS
Trigger: GCTCCCAGAGAGTGAAAATCACCAACCCTGTGACAG...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCATCTGGGTCTCCAGAATaGCAGACTAGCACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSSGSPE*QTSTEW
Trigger: CCACTCAGTGCTAGTCTGTCATTCTGGAGACCCAGA...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACTCAGTCTCCTCATCTaGAAATGGGGGTGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGLSLLI*KWGCLP
Trigger: AGGCAGGCACCCCCATTTTCAGATGAGGAGACTGAG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTGGCCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSGLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGCC...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000492389.6
CDS-3UTR TCA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAAAGGGGAGGTTGCAGTaGGCAAGAATGCGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FGKCPLISLQCCKTETQRKGRLQ*ARMRHC
Trigger: GCAGTGGCGCATTCTTGCTCACTGCAACCTCCCCTT...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAATCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: SQDKVCLWYGALLSSLALAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAEFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LAAGRGSQDKVCLWYGALFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...CAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: QIHARTWWWPPDWPAFHHCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...ATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: GSQDKVCLWYGALLSSLAFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: SAPLETASHTKTARRSLHNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTGCTGGGGTGGGGTCTaGAGGCGGCTGGAACCTAAG +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTCWGGV*RRLEPK
Trigger: CTTAGGTTCCAGCCGCCTGCAGACCCCACCCCAGCA...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGCACTGCTGTTCAGGGTaGTGTAGTTGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAEHCCSG*CSCTSM
Trigger: CATCGATGTACAACTACAGCACCCTGAACAGCAGTG...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCAACTTTGGCCATCACTaGTGTTCAGGGTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVNFGHH*CSGCCS
Trigger: ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTT...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTATATTCCACACATTTaGGGTGTTTCCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFYIPHI*GVSWGK
Trigger: TTTTCCCCAGGAAACACCGCAAATGTGTGGAATATA...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGCACCGAATCCTGTTCTaGCTGAATTCAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQHRILF*LNSRLT
Trigger: TGTCAGCCTTGAATTCAGGCAGAACAGGATTCGGTG...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACCTCAGGGTTTTGAATaGCTCGCCCACAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGPQGFE*LAHKGR
Trigger: CCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CAGAGGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCTGGTCAGCTTACTCCTaGTCTTCCTGTATCCCCACA +
Preference number: 4 (lower is better)
Translates to: QRPCLLCTSSTYCTVEVSWSAYS*SSCIPT
Trigger: TGTGGGGATACAGGAAGAGCAGGAGTAAGCTGACCA...GGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR GCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGTCAATGCGTAATTCTTaGCACTATCTGGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKSMRNS*HYLGSP
Trigger: AGGTGACCCCAGATAGTGGCAAGAATTACGCATTGA...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATCCAGGAAGGGGAGGTTaGAGTGAGCAAGAATGCGCC +
Preference number: 4 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNPGRGG*SEQECA
Trigger: GGCGCATTCTTGCTCACTGCAACCTCCCCTTCCTGG...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp AGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: RGFQIHARTWWWPPDWPATWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAEDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNREELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGAAGAGTTGAGCGGCTaGAGTCCCCTGCTCCTGCGT +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHEELSG*SPLLLR
Trigger: ACGCAGGAGCAGGGGACTCCAGCCGCTCAACTCTTC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGCGGGGCCGCCACCTaGCAGATTCTGAGCGCTTCG +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDGGAAT*QILSAS
Trigger: CGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGTGAGCCTGCTGGGGTaGGGTCTGCAGGCGGCTGGA +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIVSLLG*GLQAAG
Trigger: TCCAGCCGCCTGCAGACCCCACCCCAGCAGGCTCAC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAACACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGAGTGGCCACCACAGTaGGCATCACATCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSREWPPQ*ASHPNF
Trigger: GAAGTTTGGATGTGATGCCCACTGTGGTGGCCACTC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCACTCTTAAGATGGGGGTaGTGTGTGACCTTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSLLRWG*CVTFAC
Trigger: GCACGCAAAGGTCACACACCACCCCCATCTTAAGAG...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGATCTCAGGCTGGCTCCTaGCTTTTCAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRSQAGS*LFKPLV
Trigger: GACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGA...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCTCAGGCTGGCTCCTaGCTTTTCAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVASQAGS*LFKPLV
Trigger: GACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCCACAGTTCTCAGGCTaGCTCCTGGCTTTTCAAACC +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAPQFSG*LLAFQT
Trigger: GGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGTGG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAAGCAGACACAGGCGGTaGAAATGTGGAAATACGCAT +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGESRHRR*KCGNTH
Trigger: ATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCT...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAATATCTGTTGTTACATaGGATTCTGAGAATTCCACA +
Preference number: 4 (lower is better)
Translates to: FSAGRGGPLGLDRFRADPISVVT*DSENST
Trigger: TGTGGAATTCTCAGAATCCCATGTAACAACAGATAT...TGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR CAA 72 bp AAGATGGGGGTGGTGTGTGACCTTTGCGTGCTGAATTaGGGAGGATACTTTAAGCCTGGCAGAGACAGGGTA +
Preference number: 4 (lower is better)
Translates to: KMGVVCDLCVLN*GGYFKPGRDRV
Trigger: TACCCTGTCTCTGCCAGGCTTAAAGTATCCTCCCAAATTCAGCACGCAAAGGTCACACACCACCCCCATCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGALSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LASLSSSSYRMMILPWAFPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...AAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGADLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTATTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATGGTTTGCCTTGCAGGTaGCCACTGCTGAGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHGLPCR*PLLRER
Trigger: CCGCTCCCTCAGCAGTGGTCACCTGCAAGGCAAACC...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPERGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAAAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: RTWWWPPDWPAFHHRHTERSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...TTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTCTAACAGGTCTGGCTaGCCTGGCTTTCCACATATA +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSSNRSG*PGFPHI
Trigger: TATATGTGGAAAGCCAGGTCAGCCAGACCTGTTAGA...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACTGTCACAGGGTTGGTaGTTTTCACTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGLSQGW*FSLSGS
Trigger: GCTCCCAGAGAGTGAAAATCACCAACCCTGTGACAG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGATGGGGGTGGTGTGTaGCCTTTGCGTGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTDGGGV*PLRAEF
Trigger: AAATTCAGCACGCAAAGGTCACACACCACCCCCATC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACACAAAAGAATCTCGGCTaGCTAGGAGGGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTQKNLG*LGGKGS
Trigger: GCTTCCCTTCCCTCCTAGTCAGCCGAGATTCTTTTG...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp GTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCGCCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: VVYELLRARRLLTWISFPASVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGC...GGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTCCCAGAGAGGGTGCTTaGGAATATACAAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTPREGA*EYTRTL
Trigger: CAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGG...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR TCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTCAGAACACTGAATTCTaGGCACCAAGAGAGAAAAGG +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPQNTEF*APREKR
Trigger: CCTTTTCTCTCTTGGTGCTCAGAATTCAGTGTTCTG...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTTCAGGGTTCCCAATGTaGCTCCGGAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTSGFPM*LRRDIF
Trigger: AAATATGTCCCTCCGGAGGCACATTGGGAACCCTGA...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: GSQDKVCLWYGALLSSLAFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCATTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCATTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: DKVCLWYGALLSSLALCLTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGAGTGTGGAAAAATGTaGATTTTTCTATCTATGCTG +
Preference number: 4 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGECGKM*IFLSML
Trigger: CAGCATAGATAGAAAAATGCACATTTTTCCACACTC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAAGGAGAACATGGTTGTaGCCACCCAGAGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGRRTWL*PPRVRS
Trigger: GCTTCTCACTCTGGGTGGGCACAACCATGTTCTCCT...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CCTCTGAGCCTCTATAGCACTCGGCTTACAACTCACAAGGCATTTATCACTGTACCAAGATCACGCCACTaGACTCCAGCTTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PLSLYSTRLTTHKAFITVPRSRH*TPAWAT
Trigger: TGTTGCCCAAGCTGGAGTGCAGTGGCGTGATCTTGG...TACAGTGATAAATGCCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGGAGGTAGGCCATCATaGCCTCTATTTGTTTTCCCC +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTGGRPS*PLFVFP
Trigger: GGGGAAAACAAATAGAGGGCATGATGGCCTACCTCC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp CTTTCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSHWSWQWFQHQGLKLQNEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...ATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVALSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: VVYELLRARRLLTWISFPGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...GGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGACTCTCTTCCGGAGGAGTTAGCTTGGTTCAGTCGGCTAGGATGATCTGCAGGGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GLSSGGVSLVQSARMICRDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...CCTGCAGATCATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATCACGCTCGCACATGGTaGTGGCCGCCTGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYHARTW*WPPDWP
Trigger: TGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTG...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTCCTTTGTCTTTTCTGTTTTGTAACTGTCACTCCGAGACTGTAAGCCATTTGGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: LPLSFLFCNCHSETVSHLVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...CAAATGGCTTACAGTCTCGGAGTGACAGTTACAAAACAGAAAAGACAAAGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp TCCATACTTTTTCAAGAGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: SILFQEIEPDIITAQGVPGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...AGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCTCTTGAAAAAGTATGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTTACTTCCAGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: LKRGRTFICLSETKSLLPERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...TGGAAGTAAAGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGGAGCGGGGGTTTGAGTaGCTGGCGGGGCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVERGFE*LAGPPP
Trigger: AGGTGGCGGCCCCGCCAGCCACTCAAACCCCCGCTC...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAATCAGAGATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: TIRDAGWLSTRAISVQRFSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTACAGCATTTGAGAAGTaGCCTCTCTTTGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPTAFEK*PLFASH
Trigger: ATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGT...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGACTAGCACTGAGTaGCCACCACAGTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFQTSTE*PPQWAS
Trigger: TGATGCCCACTGTGGTGGCCACTCAGTGCTAGTCTG...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATCCCCCAGCAGCTCTCTaGGTACTTCCTGTAGAGGGA +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNPPAAL*VLPVEG
Trigger: TCCCTCTACAGGAAGTACCCAGAGAGCTGCTGGGGG...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGGCTTTTCAAACCCTTaGTCAGAGACTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSGFSNP*SETEGK
Trigger: TTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ACAATCAGAGATGCTGGCTGGCTTTCAACACGTGCCATTAGTGTGCAGCGCTTCATCAGAGATGCTGGCTaGCTTTCAACACGTGCCATT +
Preference number: 4 (lower is better)
Translates to: TIRDAGWLSTRAISVQRFIRDAG*LSTRAI
Trigger: AATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGAT...GAAGCGCTGCACACTAATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGATTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCACCCTCTTCTCCGATTaGCCCGTCTTCCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFTLFSD*PVFPGR
Trigger: CCGGCCGGGGAAGACGGGCCAATCGGAGAAGAGGGT...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
3UTR CAA 72 bp TCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATT +
Preference number: 4 (lower is better)
Translates to: SALTKDFGVLFT*CVHSCPTKAGI
Trigger: AATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
3UTR CAA 72 bp TCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCAACACCACTGATGACA +
Preference number: 4 (lower is better)
Translates to: SLVWGSAFFTGP*SRSSSPTPLMT
Trigger: TGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: KYAFPRADVSVPEFPSPFLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...AAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: GAVRIRFVFGMGLCFLHWPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...CCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGERSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTGTCTTCCAGCCGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: WQWFQHQGLKLQNHCLPAAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GGCTGGAAGACAATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAGGCATTAGCAAAGGCTaGACTAAGTTCTCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSGISKG*TKFSGN
Trigger: ATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCC...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGCCAGATCTCTCAGGTaGGTGCACACCAATTCTAAC +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQARSLR*VHTNSN
Trigger: GTTAGAATTGGTGTGCACTCACCTGAGAGATCTGGC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGTAGTTGTACATCGATaGAGCACCTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPVVVHR*STFCLR
Trigger: CCTGAGACAGAAGGTGCTTCATCGATGTACAACTAC...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGCAGGGGATCACAATGTaGCAGACACCGTTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKQGITM*QTPFRK
Trigger: TTTTCGAAACGGTGTCTGTCACATTGTGATCCCCTG...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGTGACCTTTGCGTGCTaGATTTGGGAGGATACTTTA +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGVTFAC*IWEDTL
Trigger: TAAAGTATCCTCCCAAATTCAGCACGCAAAGGTCAC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAAGAACCCTGCGGTGGTaGCTGAACAAAACGCAGCCA +
Preference number: 4 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSRTLRW*LNKTQP
Trigger: TGGCTGCGTTTTGTTCAGTCACCACCGCAGGGTTCT...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCTCTGGTCATCAAGTTaGGGCCAACACAAGGACATG +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFLWSSS*GQHKDM
Trigger: CATGTCCTTGTGTTGGCCTCAACTTGATGACCAGAG...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGGACAATGCAGCCAATaGAAGACTGTGGGGACTAAT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTGQCSQ*KTVGTN
Trigger: ATTAGTCCCCACAGTCTTTCATTGGCTGCATTGTCC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAGACCTTTCCCTCCTCTaGGCCTCTATAGCACTCGGC +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESDLSLL*ASIALG
Trigger: GCCGAGTGCTATAGAGGCTCAGAGGAGGGAAAGGTC...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCACCAGGAGGAAGGGCCTaGTGGCAAGATGCTGGCAGG +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSPGGRA*WQDAGR
Trigger: CCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCCTGG...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GAGAAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EKIVLLRQILPRSSYQQDTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...GTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTCACTGCTGTTCAGGGTaGTGTAGTTGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPHCCSG*CSCTSM
Trigger: CATCGATGTACAACTACAGCACCCTGAACAGCAGTG...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGGAAGTGGCCTCTCTTTaGCTCACATTTTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: LETASHTKTARRSLHEVKEVASL*LTFYQV
Trigger: CACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTC...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAATATCCTTTAAAAGATaGAGCCCATCCGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSISFKR*SPSVHS
Trigger: GCTGTGGACGGATGGGCTGCATCTTTTAAAGGATAT...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACCAGTCTCCTGTGGCTCCCCCAAATCATCTCGACAGAAAAGAAGAGAGAAGTTTTCCATCGCCTTTTGTaGAGGCAAGCGGAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TSLLWLPQIISTEKKREVFHRLL*RQAEES
Trigger: ACTTTCCTCCGCTTGCCTGCACAAAAGGCGATGGAA...AACTTCTCTCTTCTTTTCTGTCGAGATGATTTGGGGGAGCCACAGGAGACTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCACGTGCCATTAGTGTaGAGCGCTTCCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAHVPLV*SASFVF
Trigger: AAAGACAAAGGAAGCGCTGCACACTAATGGCACGTG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACGCTCGCACATGGTGGTaGCCGCCTGACTGGCCAGCC +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINARTWW*PPDWPA
Trigger: GGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGC...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGATCCACGCTCGCACATaGTGGTGGCCGCCTGACTGG +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMIHART*WWPPDW
Trigger: CCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGAT...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATGTGGCCCTTTGGGGCTaGATCGTTTCCGGGCAGACC +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYVALWG*IVSGQT
Trigger: GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCAC...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGTAGGGGTGGCCCTTTaGGGCTGGATCGTTTCCGGG +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLVGVAL*GWIVSG
Trigger: CCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTAC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: APALFMNCSGLGDCSPGFLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: VFKSTLAHGGGRLTGQPFVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...GAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCTCCAGGCTTTCTGACTaGAGAGCTGAGGCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFSRLSD*RAEAPC
Trigger: GCAGGGGGCCTCAGCTCTCCAGTCAGAAAGCCTGGA...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CATAGAGCGGAGTGGCTGAAAGAACACCCTCTGGAGCCACAGTTCTCAGGCTGGGTATTATTTAAACTTTaGCCATCACTGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: HRAEWLKEHPLEPQFSGWVLFKL*PSLLFR
Trigger: CCTGAACAGCAGTGATGGCCAAAGTTTAAATAATAC...CCAGCCTGAGAACTGTGGCTCCAGAGGGTGTTCTTTCAGCCACTCCGCTCTATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAGACTAGCACTGAGTaGCCACCACAGTGGGCATCA +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRQTSTE*PPQWAS
Trigger: TGATGCCCACTGTGGTGGCCACTCAGTGCTAGTCTG...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCTCTTAAGATGGGGGTaGTGTGTGACCTTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFLLRWG*CVTFAC
Trigger: GCACGCAAAGGTCACACACCACCCCCATCTTAAGAG...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCGGCTTTTCAAACCCTTaGTCAGAGACTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAGFSNP*SETEGK
Trigger: TTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCC...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGAGCAGACACAGGCGGTaGAAATGTGGAAATACGCAT +
Preference number: 4 (lower is better)
Translates to: EQMFQFLNFHRLLCRQAESRHRR*KCGNTH
Trigger: ATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCT...CTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGGTTTACTGAATGAATaGCTAGACCTATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLGLLNE*LDLSGK
Trigger: TTTTCCTGATAGGTCTAGCCATTCATTCAGTAAACC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLQLGVR*VEMKEL
Trigger: CAGCTCTTTCATCTCTACCCATCTAACCCCTAATTG...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGGCACTTCAGAAGGGTaGATCACAGTTGCAATTAGG +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTGTSEG*ITVAIR
Trigger: CCTAATTGCAACTGTGATCCACCCTTCTGAAGTGCC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334451.6
CDS-3UTR CCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATACAGTCTGGCAGTGCTaGGGAGCTGGTAAGATACAC +
Preference number: 4 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNTVWQC*GAGKIH
Trigger: GTGTATCTTACCAGCTCCCCAGCACTGCCAGACTGT...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAATTCATGGCACAGTCTaGCAGTGCTGGGGAGCTGGT +
Preference number: 4 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSIHGTV*QCWGAG
Trigger: ACCAGCTCCCCAGCACTGCCAGACTGTGCCATGAAT...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp ATAAGGGTTCATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACCGCAGTCACAAGTACTaGCGTGCGTACGCGGGGAGA +
Preference number: 4 (lower is better)
Translates to: IRVHCSRQSCNWVTVSSNRSHKY*RAYAGR
Trigger: TCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCG...GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTATCAGAGATGCTGGCTaGCTTTCAACACGTGCCATT +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPIRDAG*LSTRAI
Trigger: AATGGCACGTGTTGAAAGCCAGCCAGCATCTCTGAT...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAACCGGAGGAGTTAGCTTaGTTCAGTCGGCCTCCGGAA +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKPEELA*FSRPPE
Trigger: TTCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGG...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675596.1
CDS-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTAAAGGGAGAGCCCTGTaGTTTGGAAAGTGTCCCTTA +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTKGRAL*FGKCPL
Trigger: TAAGGGACACTTTCCAAACCACAGGGCTCTCCCTTT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACCCGGAGGAGTTAGCTTaGTTCAGTCGGCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHPEELA*FSRPLK
Trigger: CTTCAGAGGCCGACTGAACCAAGCTAACTCCTCCGG...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674539.1
3UTR CAA 72 bp ACTTCCTGTAGAGGGAGATCTAAAAACCTCAGGGTTTaGAATGCCTCGCCCACAAAGGCAGGATACACAAGG +
Preference number: 4 (lower is better)
Translates to: TSCRGRSKNLRV*NASPTKAGYTR
Trigger: CCTTGTGTATCCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTTAGATCTCCCTCTACAGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSCPVLI*YAGILG
Trigger: ACCCAAGATACCAGCATATCAAATCAAGACTGGACA...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
CDS-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACATTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTCTTCACTGGCCCTTTGTCTAGATCCAGTTCCCCAACACCACTGATGACACTTTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: FFTGPLSRSSSPTPLMTLFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...AAGTGTCATCAGTGGTGTTGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000477003.6
CDS-3UTR TCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACATTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACACTCTGAAGAGTTaGGCGGCTGGAGTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMDTLKS*AAGVPC
Trigger: GCAGGGGACTCCAGCCGCTCAACTCTTCAGAGTGTC...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCGAGGTTGTCAGCCCTaGCAAAGGACTTCGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHRGCQP*QRTSES
Trigger: GGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCG...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGTAGTTGTACATCGATaGAGCACCTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTVVVHR*STFCLR
Trigger: CCTGAGACAGAAGGTGCTTCATCGATGTACAACTAC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTAGGATGTTACACAGGTaGGAATTTGCTTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSRMLHR*EFASVQ
Trigger: CTGTACAGAAGCAAATTCTCACCTGTGTAACATCCT...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTAGGATGTTACACAGGTaGGAATTTGCTTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFRMLHR*EFASVQ
Trigger: CTGTACAGAAGCAAATTCTCACCTGTGTAACATCCT...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACAAAACCTCAGGGTTTTaGATGCCTCGCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNKTSGF*MPRPQR
Trigger: CCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTT...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATCAAAAGAATCTCGGCTaGCTAGGAGGGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNQKNLG*LGGKGS
Trigger: GCTTCCCTTCCCTCCTAGTCAGCCGAGATTCTTTTG...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAATATGGTTTACTGAATaGATGGCTAGACCTATCAGG +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEIWFTE*MARPIR
Trigger: CCTGATAGGTCTAGCCATTCATTCAGTAAACCATAT...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGCCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTASVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334451.6
CDS-3UTR TCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAGCCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSASVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGC...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTGTTACATGGGATTCTaGGAATTCCACAAGAAATCC +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPCYMGF*EFHKKS
Trigger: GGATTTCTTGTGGAATTCTCAGAATCCCATGTAACA...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCATTTCATATGATGAGGTaGTATTCAAAGCTGCAAACC +
Preference number: 4 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPFHMMR*YSKLQT
Trigger: GGTTTGCAGCTTTGAATATCACCTCATCATATGAAA...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAGCACTACAATGCGGGTaGCAGAGTGAGACTCTATCT +
Preference number: 4 (lower is better)
Translates to: FGKCPLISLQCCKTETQRALQCG*QSETLS
Trigger: AGATAGAGTCTCACTCTGTCACCCGCATTGTAGTGC...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTTTATTTTGTATCAGCTaGCCCTCACCACAATGCAGG +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTLFCIS*PSPQCR
Trigger: CCTGCATTGTGGTGAGGGTCAGCTGATACAAAATAA...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp CCTTTCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAAAACAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: PFPLVLAVVSASGSEAAENSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGTT...TTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS-3UTR GCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGTCAGGGTTCCCAATGTaGCTCCGGAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLSGFPM*LRRDIF
Trigger: AAATATGTCCCTCCGGAGGCACATTGGGAACCCTGA...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
CDS-3UTR GCA 90 bp CCTATTTTGCCCGTTTTCCAAAGGTTTGGTCAGCTTACTCCTGCTCTTCCTGTATCAGGGTTCCCAATGTaGCTCCGGAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: PILPVFQRFGQLTPALPVSGFPM*LRRDIF
Trigger: AAATATGTCCCTCCGGAGGCACATTGGGAACCCTGA...TACAGGAAGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACGGGCAAAATAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR GCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: VVYELLRARRLLTWISFPCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...GGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTAGAGCTGAGGCCCCCTaGCCTAATTGGACTGATTTC +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSRAEAP*PNWTDF
Trigger: GAAATCAGTCCAATTAGGGCAGGGGGCCTCAGCTCT...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTATATCCTTTAAAAGATaGAGCCCATCCGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPISFKR*SPSVHS
Trigger: GCTGTGGACGGATGGGCTGCATCTTTTAAAGGATAT...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTATATCCTTTAAAAGATaGAGCCCATCCGTCCACAGC +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLISFKR*SPSVHS
Trigger: GCTGTGGACGGATGGGCTGCATCTTTTAAAGGATAT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGAAAATGGGGGTGCCTaGCTCATCAGACTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHENGGA*LIRLLW
Trigger: CCACAACAGTCTGATGAGGCAGGCACCCCCATTTTC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GAGAAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGAGAACATGGTTGTaGCCACCCAGAGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: EKIVLLRQILPRSSYQQDRRTWL*PPRVRS
Trigger: GCTTCTCACTCTGGGTGGGCACAACCATGTTCTCCT...GTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCACGTGCCATTAGTGTaGAGCGCTTCCTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHHVPLV*SASFVF
Trigger: AAAGACAAAGGAAGCGCTGCACACTAATGGCACGTG...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR GCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTCCCCACAATCAGAGATaGTGGCTGGCTTTCAACACG +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFPHNQR*WLAFNT
Trigger: CGTGTTGAAAGCCAGCCAGCATCTCTGATTGTGGGG...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR GCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAAGCAGAGTATCACCTTaGTCACCTCCGGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPSRVSP*SPPESM
Trigger: CATGCTTTCCGGAGGTGAGCAAGGTGATACTCTGCT...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTCTTACTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPILTRMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGTAAG...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTATAGCAACAGTGCTGTaGAAACACAGAGTGCAACTG +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTIATVL*KHRVQL
Trigger: CAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTAT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGATGCAGTGAGCAAGAATaGGCCACTGCACTACAATGC +
Preference number: 4 (lower is better)
Translates to: FGKCPLISLQCCKTETQRCSEQE*ATALQC
Trigger: GCATTGTAGTGCAGTGGCGCATTCTTGCTCACTGCA...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAGCACTGGATCATGCCTaGAATCCCAGCACGTTGGGA +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESALDHA*NPSTLG
Trigger: TCCCAACGTGCTGGGATTGCAGGCATGATCCAGTGC...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: SAPLETASHTKTARRSLHDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GGRLTGQPFIIVIQNDDLDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...AAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVADKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGARQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTTGAGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTACTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: FEKWPLFASHFTRCFRMLLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: HLRYYLNFGHHCCSGCCSGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGGAGGAAGGGCCTGCTaGCAAGATGCTGGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSGGRAC*QDAGRE
Trigger: TTCCCTGCCAGCATCTTGCCAGCAGGCCCTTCCTCC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGGGCACCAGGCACCTTaGACTCTCTTCCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFGHQAP*TLFRRS
Trigger: ACTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: DKVCLWYGALLSSLALCLAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAATTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGELSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGCCCCCTGCCCTAATTaGACTGATTTCCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFAPCPN*TDFLIH
Trigger: ATGAATCAGGAAATCAGTCCAATTAGGGCAGGGGGC...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCGGATTTAAATCCAGGTaGACAGAAACTAATTATTCG +
Preference number: 4 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLGFKSR*TETNYS
Trigger: CGAATAATTAGTTTCTGTCCACCTGGATTTAAATCC...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTACAGCATTTGAGAAGTaGCCTCTCTTTGCCTCACAT +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLTAFEK*PLFASH
Trigger: ATGTGAGGCAAAGAGAGGCCACTTCTCAAATGCTGT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTCTCTTAAGATGGGGGTaGTGTGTGACCTTTGCGTGC +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSLLRWG*CVTFAC
Trigger: GCACGCAAAGGTCACACACCACCCCCATCTTAAGAG...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTGTGCAGGCAAGCGGAGAACCTACTCTTAAGATaGGGGTGGTGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: EQMFQFLNFHRLLCRQAENLLLR*GWCVTF
Trigger: AAAGGTCACACACCACCCCCATCTTAAGAGTAGGTT...CTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGTCTCAGGCTGGCTCCTaGCTTTTCAAACCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRSQAGS*LFKPLV
Trigger: GACCAAGGGTTTGAAAAGCCAGGAGCCAGCCTGAGA...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTCCACAGTTCTCAGGCTaGCTCCTGGCTTTTCAAACC +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPPQFSG*LLAFQT
Trigger: GGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGTGG...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTCCACAGTTCTCAGGCTaGCTCCTGGCTTTTCAAACC +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSPQFSG*LLAFQT
Trigger: GGTTTGAAAAGCCAGGAGCCAGCCTGAGAACTGTGG...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCACCAAAGGAGAACATaGTTGTGCCCACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRHQRRT*LCPPRV
Trigger: CACTCTGGGTGGGCACAACCATGTTCTCCTTTGGTG...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: GAVRIRFVFGMGLCFLHWQLGVR*VEMKEL
Trigger: CAGCTCTTTCATCTCTACCCATCTAACCCCTAATTG...CCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000492389.6
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFQLGVR*VEMKEL
Trigger: CAGCTCTTTCATCTCTACCCATCTAACCCCTAATTG...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TGGTCCACTATACGCAATTTATTAAAGGGCAGAGGCCTTGTCTTCTTTGTACGTCAAGGGCTGTGTCTTTaGGTACTTCGCTCCTCGCAG +
Preference number: 4 (lower is better)
Translates to: WSTIRNLLKGRGLVFFVRQGLCL*VLRSSQ
Trigger: CTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTG...ACGTACAAAGAAGACAAGGCCTCTGCCCTTTAATAAATTGCGTATAGTGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR TCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTCPVLI*YAGILG
Trigger: ACCCAAGATACCAGCATATCAAATCAAGACTGGACA...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPECPVLI*YAGILG
Trigger: ACCCAAGATACCAGCATATCAAATCAAGACTGGACA...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVATSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000675803.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000675803.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATACTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFILLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCACTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPERSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGATGCTAGGGGAAAGCTaGGTGTGGAAAAATGTGCAT +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQMLGES*VWKNVH
Trigger: ATGCACATTTTTCCACACTCAGCTTTCCCCTAGCAT...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGTACTCCAAAGTTGTCTaGCGATGGGAACGCAGAATC +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLYSKVV*RWERRI
Trigger: GATTCTGCGTTCCCATCGTCAGACAACTTTGGAGTA...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGCAGCTAGTCAACCCCTaGGACGCTGGTAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKQLVNP*DAGRKP
Trigger: TGGCTTCCTACCAGCGTCTCAGGGGTTGACTAGCTG...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ACCAGTCTCCTGTGGCTCCCCCAAATCATCTCGACAGAAAAGAAGAGAGAAGTTCCTAGCCTAGGACTCTaGTTTCACTTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: TSLLWLPQIISTEKKREVPSLGL*FHLHST
Trigger: TGTGGAATGTAAGTGAAATCAGAGTCCTAGGCTAGG...AACTTCTCTCTTCTTTTCTGTCGAGATGATTTGGGGGAGCCACAGGAGACTGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACCAGGGGATCACAATGTaGCAGACACCGTTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNQGITM*QTPFRK
Trigger: TTTTCGAAACGGTGTCTGTCACATTGTGATCCCCTG...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGCAGGGGATCACAATGTaGCAGACACCGTTTCGAAAA +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLQGITM*QTPFRK
Trigger: TTTTCGAAACGGTGTCTGTCACATTGTGATCCCCTG...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGATATGGTTTACTGAATaGATGGCTAGACCTATCAGG +
Preference number: 4 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLIWFTE*MARPIR
Trigger: CCTGATAGGTCTAGCCATTCATTCAGTAAACCATAT...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATTCCACAAGAAATCCTTTTGCTCGAGTCTTCAGCATTAGGGCTTTGTGACAGATTGGTTCAGTCGGCCTaGAGGGAGCAAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: IPQEILLLESSALGLCDRLVQSA*REQERR
Trigger: CCTTCTTTCTTGCTCCCTTCAGGCCGACTGAACCAA...TCTGTCACAAAGCCCTAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGGGCCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRGLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGCC...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000675596.1
CDS-3UTR TCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAAGCACTTTGGGAGACTaGGGTGGAAGGATTGCTCGA +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESSTLGD*GGRIAR
Trigger: TCGAGCAATCCTTCCACCTCAGTCTCCCAAAGTGCT...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAESLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SSAPLETASHTKTARRSLSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTATTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: DKVCLWYGALLSSLALCLFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCAGGCCTGCTGGCAAGATaGTGGCAGGGAACCAGTAAT +
Preference number: 4 (lower is better)
Translates to: GERKVLTDYLQSRARRWSGLLAR*WQGTSN
Trigger: ATTACTGGTTCCCTGCCAGCATCTTGCCAGCAGGCC...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATAAGGGTTCATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACTCGGCTAGGATGATCTaGAGGCCCTTGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IRVHCSRQSCNWVTVSSNSARMI*RPLLLF
Trigger: GAAGAGGAGCAAGGGCCTGCAGATCATCCTAGCCGA...GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCATTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGGATCTCTCAGGTGAGTaGACACCAATTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGDLSGE*TPILTG
Trigger: ACCTGTTAGAATTGGTGTGCACTCACCTGAGAGATC...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATCACATTTTACCAGGTaGTTCAGGATGTTACACAGG +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQSHFTR*FRMLHR
Trigger: CCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGAAGTGGCCTCTCTTTaGCTCACATTTTACCAGGTG +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLEVASL*LTFYQV
Trigger: CACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCACCTCAGGGTTTTGAATaGCTCGCCCACAAAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GERKVLTDYLQSRARRWSPQGFE*LAHKGR
Trigger: CCTGCCTTTGTGGGCGAGGCATTCAAAACCCTGAGG...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTTCCATCGCCTTTTGTaGAGGCAAGCGGAGGAAAGT +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPFHRLL*RQAEES
Trigger: ACTTTCCTCCGCTTGCCTGCACAAAAGGCGATGGAA...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGAAACCCAGAGAGGGTaGTTGAGAATATACAAGAAC +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTETQRG*LRIYKN
Trigger: GTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR GCA 90 bp CCACAAATGCAGCAGGGGACTAGCGGTGAAACAGATGAAGAAACTGAAGGGTCCCCTAATGTCCTATTTTaGCCGTTTTCCAAAGGTTTG +
Preference number: 4 (lower is better)
Translates to: PQMQQGTSGETDEETEGSPNVLF*PFSKGL
Trigger: CAAACCTTTGGAAAACGGGCAAAATAGGACATTAGG...GGACCCTTCAGTTTCTTCATCTGTTTCACCGCTAGTCCCCTGCTGCATTTGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR GCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAAGGTGCACTGGATCATaGCTGCAATCCCAGCACGTT +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESRCTGS*LQSQHV
Trigger: AACGTGCTGGGATTGCAGGCATGATCCAGTGCACCT...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTTCTAACGTATCACCTTaGCACATACTCGTAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTSNVSP*HILVRA
Trigger: AGCTCTTACGAGTATGTGGCAAGGTGATACGTTAGA...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp TGCTGCAAAACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGAAAGCTGAAACTCCTTaGTCTAGCACTGGACACCAA +
Preference number: 4 (lower is better)
Translates to: CCKTETQRGCLRIYKNPAKAETP*SSTGHQ
Trigger: TTGGTGTCCAGTGCTAGAGCAAGGAGTTTCAGCTTT...CGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGTTTTGCAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTTTCATCAGATATCCTaGTCTTCCTGTATCCCCACA +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAFHQIS*SSCIPT
Trigger: TGTGGGGATACAGGAAGAGCAGGATATCTGATGAAA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR GCA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGTCATTCAAGTCTGTCTaGCTCCGCTTGAATCTAAAC +
Preference number: 4 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPESFKSV*LRLNLN
Trigger: GTTTAGATTCAAGCGGAGGCAGACAGACTTGAATGA...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: DKVCLWYGALLSSLALCLEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: LVAMTKSTIYSSVPYHSYLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...GTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTACGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVADKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTGGTGGCCGCCTGACTaGCCAGCCTTTCATCATCGT +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSWWPPD*PAFHHR
Trigger: ACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCA...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGCTGCTGGCAAGATGCTaGCAGGGAACCAGTAATCAG +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQLLARC*QGTSNQ
Trigger: CTGATTACTGGTTCCCTGCCAGCATCTTGCCAGCAG...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: AVTSRTGNFQWAFQKLVAHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGCACAGGCCGGTGTGGTaGCCAGGGCTTTCCCATGAG +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVHRPVW*PGLSHE
Trigger: CTCATGGGAAAGCCCTGGCCACCACACCGGCCTGTG...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: WAMGVITDILTTSEGRFGLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: ALASILKTGPAICWAESSVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCCAGGTCTGGCTGACCTaGCTTTCCACATATATACAG +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSQVWLT*LSTYIQ
Trigger: CTGTATATATGTGGAAAGCCAGGTCAGCCAGACCTG...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCAGCAAAGCAAGCACTGTaGAGAAATACACATAAATAT +
Preference number: 4 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSAKQAL*RNTHKY
Trigger: ATATTTATGTGTATTTCTCCACAGTGCTTGCTTTGC...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTTTTGTTCTGTTTTCTTaGTCGAGTAGCCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTFVLFS*SSSLKS
Trigger: AGACTTTAGGCTACTCGACCAAGAAAACAGAACAAA...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCTCATCAGACTGTTGTaGAAATTAAATGGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKLIRLL*KLNGSK
Trigger: TTTTGACCCATTTAATTTCCACAACAGTCTGATGAG...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAGCAGACACAGGCGGTaGAAATGTGGAAATACGCAT +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGSRHRR*KCGNTH
Trigger: ATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTQLGVR*VEMKEL
Trigger: CAGCTCTTTCATCTCTACCCATCTAACCCCTAATTG...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334451.6
CDS-3UTR CCA 90 bp GGCCTTGTCTTCTTTGTACGTCTAGCACCTACTGCACCGTGGAAGTTTCCAATAGCACCTACTGCACCGTaGAAGTTTCCAATAACGTTT +
Preference number: 4 (lower is better)
Translates to: GLVFFVRLAPTAPWKFPIAPTAP*KFPITF
Trigger: AAACGTTATTGGAAACTTCCACGGTGCAGTAGGTGC...TATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGTACAAAGAAGACAAGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCATTTGGGAGACTGAGGTaGAAGGATTGCTCGAGGCCA +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESFGRLR*KDCSRP
Trigger: TGGCCTCGAGCAATCCTTCCACCTCAGTCTCCCAAA...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAGATGGTCAGGTGCACTaGATCATGCCTGCAATCCCA +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESDGQVH*IMPAIP
Trigger: TGGGATTGCAGGCATGATCCAGTGCACCTGACCATC...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATACTGGTGCACCTTGTaGGTAACCATAGAGATTATG +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQYWCTL*VTIEIM
Trigger: CATAATCTCTATGGTTACCCACAAGGTGCACCAGTA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541543.6
CDS-3UTR CCA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACTTTTCATCAGATACTaGTGCACCTTGTGGGTAACC +
Preference number: 4 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKLFIRY*CTLWVT
Trigger: GGTTACCCACAAGGTGCACCAGTATCTGATGAAAAG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000541543.6
CDS-3UTR TCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCACTGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: CSRQSCNWVTVSSNNVALLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGCCACTGATGACACTCTaGAGAGTTGAGCGGCTGGAG +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLPLMTL*RVERLE
Trigger: CTCCAGCCGCTCAACTCTTCAGAGTGTCATCAGTGG...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTGTCAAAATCCTTCCTaGGGTGGCCTCCTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSCQNPS*GGLLRG
Trigger: TCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACA...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATCTAACATGGATGGACTaGAGCTGGGCAATGGGCGTC +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDLTWMD*SWAMGV
Trigger: GACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAG...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGTACTCCAAAGTTGTCTaGCGATGGGAACGCAGAATC +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRYSKVV*RWERRI
Trigger: GATTCTGCGTTCCCATCGTCAGACAACTTTGGAGTA...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAAGGATGTTACACAGGTaGGAATTTGCTTCTGTACAG +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTRMLHR*EFASVQ
Trigger: CTGTACAGAAGCAAATTCTCACCTGTGTAACATCCT...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCTGTCACAGGGTTGGTaGTTTTCACTCTCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLLSQGW*FSLSGS
Trigger: GCTCCCAGAGAGTGAAAATCACCAACCCTGTGACAG...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTCACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSHLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTG...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480206.2
ENST00000676243.1
CDS-3UTR TCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTAGGAATCTGAAGGTCTaGTGCTTAACTCCTCAATTT +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPRNLKV*CLTPQF
Trigger: AAATTGAGGAGTTAAGCATCAGACCTTCAGATTCCT...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAACAGAGCTGCAAGAATaGTTCCAGGGACAATCTGCC +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSTELQE*FQGQSA
Trigger: GGCAGATTGTCCCTGGAATCATTCTTGCAGCTCTGT...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTATCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCISVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGAT...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675168.1
ENST00000675962.1
CDS-3UTR GCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: SWAMGVITDILTTSEGRFSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCATCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTCAGGGCTCGGCGACTaGTCACCTGGATTTCCTTTC +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMSGLGD*SPGFPF
Trigger: GAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAGCGTTGTTTATGAACTaGTCAGGGCTCGGCGACTGC +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSALFMN*SGLGDC
Trigger: GCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGC...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATAGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFIAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGCGGCTGGAGTCCCCTaGTCCTGCGTTGTTTATGAA +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDAAGVP*SCVVYE
Trigger: TTCATAAACAACGCAGGAGCAGGGGACTCCAGCCGC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCATTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGATCTCTCAGGTGAGTaGACACCAATTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSDLSGE*TPILTG
Trigger: ACCTGTTAGAATTGGTGTGCACTCACCTGAGAGATC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGCACTGCTGTTCAGGGTaGTGTAGTTGTACATCGATG +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVHCCSG*CSCTSM
Trigger: CATCGATGTACAACTACAGCACCCTGAACAGCAGTG...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTAACTTTGGCCATCACTaGTGTTCAGGGTGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFNFGHH*CSGCCS
Trigger: ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTT...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGATATATTCCACACATTTaGGGTGTTTCCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRYIPHI*GVSWGK
Trigger: TTTTCCCCAGGAAACACCGCAAATGTGTGGAATATA...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGATCACATTTTACCAGGTaGTTCAGGATGTTACACAGG +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGSHFTR*FRMLHR
Trigger: CCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGA...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CTTCCTTTGTCTTTTCTGTTTTGTAACTGTCACTCCGAGACTGTAAGCCATTTGCCCCACAATCAGAGATaGTGGCTGGCTTTCAACACG +
Preference number: 4 (lower is better)
Translates to: LPLSFLFCNCHSETVSHLPHNQR*WLAFNT
Trigger: CGTGTTGAAAGCCAGCCAGCATCTCTGATTGTGGGG...CAAATGGCTTACAGTCTCGGAGTGACAGTTACAAAACAGAAAAGACAAAGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR GCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTAAAGTCTCTCTTCAATaGGTAATTCTTGCCACTATC +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRKVSLQ*VILATI
Trigger: GATAGTGGCAAGAATTACGCATTGAAGAGAGACTTT...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATTCAGTGGCTCCCCATTaGTTCCTAACTAAAGCTGAA +
Preference number: 4 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNSVAPH*FLTKAE
Trigger: TTCAGCTTTAGTTAGGAAGCAATGGGGAGCCACTGA...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp GGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTAGTCATACTGTTACCTaGACTGCAGCACTAATTAAA +
Preference number: 4 (lower is better)
Translates to: GGRLTGQPFIIVIQNDDLSHTVT*TAALIK
Trigger: TTTAATTAGTGCTGCAGTGCAGGTAACAGTATGACT...AAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS-3UTR CCA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTGTATCTTGGGTTCTGTaGTATCCTTTTCATCAGATA +
Preference number: 4 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRVSWVL*YPFHQI
Trigger: TATCTGATGAAAAGGATACCACAGAACCCAAGATAC...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR CCA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: NNREETRACHTSGFYGHLDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: GGRLTGQPFIIVIQNDDLTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...AAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GGAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: GTGDRDREEAYPIHMSWSTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...AGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKHWSWQ*FQHQGL
Trigger: CAGACCCTGATGCTGAAACCACTGCCAGGACCAATG...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: LVAMTKSTIYSSVPYHSYDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...GTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACCGGCGACTGCTCACCTaGATTTCCTTTCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDRRLLT*ISFPIG
Trigger: ACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCG...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACCAGTCTCCTGTGGCTCCCCCAAATCATCTCGACAGAAAAGAAGAGAGAAGTTGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TSLLWLPQIISTEKKREVDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...AACTTCTCTCTTCTTTTCTGTCGAGATGATTTGGGGGAGCCACAGGAGACTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGCTGCAGAATCATTGTCTTCCAGCCTTTGAATCTCCTCAGCTGTCACTTCCAGGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SCRIIVFQPLNLLSCHFQDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...CTGGAAGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAATGATTCTGCAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: WKQLLTPRLPGEAFMKSRHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCAGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: HCSRQSCNWVTVSSNNVAAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...TGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAGAGCATTTTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTAGGGCCTGCAATATGCTaGGCAGAGAGCTCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: QSILALAKAELSSQAINLGPAIC*AESSLL
Trigger: CAGCAAGGAGCTCTCTGCCCAGCATATTGCAGGCCC...TAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: LSHLWFLWSPVKILPEVATCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGEVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGACTCTAAAACAGAACTaGGCTGAATCTGAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: TQALASILKTGPAICWAETLKQN*AESESY
Trigger: ATAACTTTCAGATTCAGCCCAGTTCTGTTTTAGAGT...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTCAGGTCTGGCTGACCTaGCTTTCCACATATATACAG +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPQVWLT*LSTYIQ
Trigger: CTGTATATATGTGGAAAGCCAGGTCAGCCAGACCTG...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGCCCCCTGCCCTAATTaGACTGATTTCCTGATTCAT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFAPCPN*TDFLIH
Trigger: ATGAATCAGGAAATCAGTCCAATTAGGGCAGGGGGC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCACCAAAGGAGAACATaGTTGTGCCCACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHHQRRT*LCPPRV
Trigger: CACTCTGGGTGGGCACAACCATGTTCTCCTTTGGTG...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNCPVLI*YAGILG
Trigger: ACCCAAGATACCAGCATATCAAATCAAGACTGGACA...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000675803.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACCTCCTGCGTTGTTTATaGACTGCTCAGGGCTCGGCG +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINLLRCL*TAQGSA
Trigger: CGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAG...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675813.1
ENST00000676115.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACTTCAGTCGGCTAGGATaGTCTGCAGGCCCTTGCTCC +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINFSRLG*SAGPCS
Trigger: GGAGCAAGGGCCTGCAGATCATCCTAGCCGACTGAA...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGTCTAAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: DKVCLWYGALLSSLALCLRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...TAGACAAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCACTGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: CSRQSCNWVTVSSNNVALAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp GCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: AFQKLVAMTKSTIYSSVPAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...AGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTATGCTAGGGGAAAGCTaGGTGTGGAAAAATGTGCAT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSMLGES*VWKNVH
Trigger: ATGCACATTTTTCCACACTCAGCTTTCCCCTAGCAT...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGCCAGATCTCTCAGGTaGGTGCACACCAATTCTAAC +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFARSLR*VHTNSN
Trigger: GTTAGAATTGGTGTGCACTCACCTGAGAGATCTGGC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGGTAGTTGTACATCGATaGAGCACCTTCTGTCTCAGG +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQVVVHR*STFCLR
Trigger: CCTGAGACAGAAGGTGCTTCATCGATGTACAACTAC...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCATACCAAGCCCAATATaGTCGTGCTGGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFIPSPI*SCWSWL
Trigger: TAGCCAGGACCAGCACGATCATATTGGGCTTGGTAT...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCACCTAGCCTAGGACTCTaGTTTCACTTACATTCCACA +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSPSLGL*FHLHST
Trigger: TGTGGAATGTAAGTGAAATCAGAGTCCTAGGCTAGG...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTCCGTCCACAGCATTTaGGAAGTGGCCTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMSVHSI*EVASLC
Trigger: GCAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCATCTGGGTCTCCAGAATaGCAGACTAGCACTGAGTGG +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSSGSPE*QTSTEW
Trigger: CCACTCAGTGCTAGTCTGTCATTCTGGAGACCCAGA...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGATGGGGGTGGTGTGTaGCCTTTGCGTGCTGAATTT +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDDGGGV*PLRAEF
Trigger: AAATTCAGCACGCAAAGGTCACACACCACCCCCATC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGCAAAAGAATCTCGGCTaGCTAGGAGGGAAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMQKNLG*LGGKGS
Trigger: GCTTCCCTTCCCTCCTAGTCAGCCGAGATTCTTTTG...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGGCCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKGLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGCC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000675962.1
CDS-3UTR TCA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCACTTCCCAATTTGGTCTaGGTTTCTGCACACCTGATT +
Preference number: 4 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSLPNLV*VSAHLI
Trigger: AATCAGGTGTGCAGAAACTCAGACCAAATTGGGAAG...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATAAAATACTTGCTGAATaGTGGTCAGGTGCACTGGAT +
Preference number: 4 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNKILAE*WSGALD
Trigger: ATCCAGTGCACCTGACCATCATTCAGCAAGTATTTT...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp CCTCTGAGCCTCTATAGCACTCGGCTTACAACTCACAAGGCATTTATCACTGTACTCAAAAATACTTGCTaGATGATGGTCAGGTGCACT +
Preference number: 4 (lower is better)
Translates to: PLSLYSTRLTTHKAFITVLKNTC*MMVRCT
Trigger: AGTGCACCTGACCATCATTCAGCAAGTATTTTTGAG...TACAGTGATAAATGCCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR GCA 90 bp CAATGTGGCACTGCTGGTAAGAATCTCTATCACGCACATCTAGCAGCAGGAAGGAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QCGTAGKNLYHAHLAAGRSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...CCTTCCTGCTGCTAGATGTGCGTGATAGAGATTCTTACCAGCAGTGCCACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: NREETRACHTSGFYGHLSSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGACTCAAAACAGGGCCTaGAATATGCTGGGCAGAGAG +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKTQNRA*NMLGRE
Trigger: CTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGT...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: VNNREETRACHTSGFYGHFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCACCGAATCCTGTTCTaGCTGAATTCAAGGCTGACA +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTHRILF*LNSRLT
Trigger: TGTCAGCCTTGAATTCAGGCAGAACAGGATTCGGTG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCACACAGGTGAGAATTTaGTTCTGTACAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: SHLWFLWSPVKILPEVASTQVRI*FCTEQR
Trigger: TCTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGT...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAGAAACCCAGAGAGGGTaGTTGAGAATATACAAGAAC +
Preference number: 4 (lower is better)
Translates to: FGKCPLISLQCCKTETQRETQRG*LRIYKN
Trigger: GTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTC...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp ATGAAGAAACTGAAGGGTCCTATGGAGAGAGGGGTAAGCCTAATGTCCTATTTTACGTCTAGCACCTACTaGACCGTGGAAGTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: MKKLKGPMERGVSLMSYFTSSTY*TVEVSN
Trigger: ATTGGAAACTTCCACGGTGCAGTAGGTGCTAGACGT...AAAATAGGACATTAGGCTTACCCCTCTCTCCATAGGACCCTTCAGTTTCTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR GCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCCAAGATCATCCCATTaGATTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFPRSSH*IPAWVT
Trigger: TGTCACCCAGGCTGGAATGCAATGGGATGATCTTGG...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTTCCCACTGTGTAAACTaGTTACATCTTAACTATGCA +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTSHCVN*LHLNYA
Trigger: TGCATAGTTAAGATGTAAGCAGTTTACACAGTGGGA...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGGAGGATTTCTTCCTTaGTTTAATTGGACAAATGAG +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTGGFLP*FNWTNE
Trigger: CTCATTTGTCCAATTAAAGCAAGGAAGAAATCCTCC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGTATCTTGGGTTCTGTaGTATCCTTTTCATCAGATA +
Preference number: 4 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMVSWVL*YPFHQI
Trigger: TATCTGATGAAAAGGATACCACAGAACCCAAGATAC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGTATCTTGGGTTCTGTaGTATCCTTTTCATCAGATA +
Preference number: 4 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTVSWVL*YPFHQI
Trigger: TATCTGATGAAAAGGATACCACAGAACCCAAGATAC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR CCA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTGTATCTTGGGTTCTGTaGTATCCTTTTCATCAGATA +
Preference number: 4 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLVSWVL*YPFHQI
Trigger: TATCTGATGAAAAGGATACCACAGAACCCAAGATAC...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACAGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCAGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: HCSRQSCNWVTVSSNNVAEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...TGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: LSSSSISVSTQALASILKGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAGAGTGGCCACCACAGTaGGCATCACATCCAAACTTC +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSEWPPQ*ASHPNF
Trigger: GAAGTTTGGATGTGATGCCCACTGTGGTGGCCACTC...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTCACCAAAGGAGAACATaGTTGTGCCCACCCAGAGTG +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSHQRRT*LCPPRV
Trigger: CACTCTGGGTGGGCACAACCATGTTCTCCTTTGGTG...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTATTTTGCCCGTTTTCCAAAGGTTTGGTCAGCTTACTCCTGCTCTTCCTGTATCGTTTTCCAAAGGTTTaGTCAGCTTACTCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: LFCPFSKGLVSLLLLFLYRFPKV*SAYSCS
Trigger: AGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACG...ATACAGGAAGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACGGGCAAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAGAGAGCCCTGTGGTTTaGAAAGTGTCCCTTAATCAG +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESESPVV*KVSLNQ
Trigger: CTGATTAAGGGACACTTTCCAAACCACAGGGCTCTC...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATAATGAGATAGCAGGATaGCTGACACAAAAATACCCC +
Preference number: 4 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNNEIAG*LTQKYP
Trigger: GGGGTATTTTTGTGTCAGCCATCCTGCTATCTCATT...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp TCTTTTCTGTTTTGTAACTGTCACTCCGAGACTGTAAGCCATTTGAGGGCAAGGTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGT +
Preference number: 4 (lower is better)
Translates to: SFLFCNCHSETVSHLRARCPVLI*YAGILG
Trigger: ACCCAAGATACCAGCATATCAAATCAAGACTGGACA...CCTTGCCCTCAAATGGCTTACAGTCTCGGAGTGACAGTTACAAAACAGAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR TCA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGGGAAGCAACTTGGATaGTCAGCTGGGCAAAAGTTG +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFGKQLG*SAGQKL
Trigger: CAACTTTTGCCCAGCTGATCATCCAAGTTGCTTCCC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTCAAGAACAGTGAATaGAAAGGTGGCAGGGACAGG +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDVKNSE*KGGRDR
Trigger: CCTGTCCCTGCCACCTTTTCATTCACTGTTCTTGAC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACTATACTGACCACAAGTaGGGGCCGCTTTGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINYTDHK*GPLWWA
Trigger: AGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTATA...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR TCA 90 bp GCTTTTCAAACCCTTGGTCAGAGACTGAAGGCAAACCTGAGTCACTTAATTTCTGGCATTAGCAAAGGCTaGACTAAGTTCTCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: AFQTLGQRLKANLSHLISGISKG*TKFSGN
Trigger: ATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCC...AGAAATTAAGTGACTCAGGTTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATTCTAACAGGTCTGGCTaGCCTGGCTTTCCACATATA +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHSNRSG*PGFPHI
Trigger: TATATGTGGAAAGCCAGGTCAGCCAGACCTGTTAGA...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAGCCAGATCTCTCAGGTaGGTGCACACCAATTCTAAC +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSARSLR*VHTNSN
Trigger: GTTAGAATTGGTGTGCACTCACCTGAGAGATCTGGC...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTATACCAAGCCCAATATaGTCGTGCTGGTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIIPSPI*SCWSWL
Trigger: TAGCCAGGACCAGCACGATCATATTGGGCTTGGTAT...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGAAAACCTCAGGGTTTTaGATGCCTCGCCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMKTSGF*MPRPQR
Trigger: CCTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTT...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGATATGGTTTACTGAATaGATGGCTAGACCTATCAGG +
Preference number: 4 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLIWFTE*MARPIR
Trigger: CCTGATAGGTCTAGCCATTCATTCAGTAAACCATAT...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATATCAGGGTTCCCAATGTaGCTCCGGAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFISGFPM*LRRDIF
Trigger: AAATATGTCCCTCCGGAGGCACATTGGGAACCCTGA...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGGGTTCCCAATGTaGCTCCGGAGGGACATATTT +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLISGFPM*LRRDIF
Trigger: AAATATGTCCCTCCGGAGGCACATTGGGAACCCTGA...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
CDS-3UTR GCA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: CISKQGLTRLSALTKDFGSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LASLSSSSYRMMILPWAFCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...AAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCATTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACAGGGCCTGCAATATaGTGGGCAGAGAGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINTGPAI*WAESSL
Trigger: CAAGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGT...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGTGAAGACACCCACATaGATACCTTTCTGGCTCCAG +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFVKTPT*IPFWLQ
Trigger: CTGGAGCCAGAAAGGTATGCATGTGGGTGTCTTCAC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGGATCTCTCAGGTGAGTaGACACCAATTCTAACAGGT +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQDLSGE*TPILTG
Trigger: ACCTGTTAGAATTGGTGTGCACTCACCTGAGAGATC...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTCAACATTCATAATTaGACAAAGCATCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLFNIHN*TKHHWS
Trigger: TGACCAGTGATGCTTTGTGCAATTATGAATGTTGAA...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTATATTCCACACATTTaGGGTGTTTCCTGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: WLQEISSKGEHSVSVQLLYIPHI*GVSWGK
Trigger: TTTTCCCCAGGAAACACCGCAAATGTGTGGAATATA...AAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCATTAATCAGCCTGCAGTaGTGCAAAACAGAAACCCAG +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESLISLQ*CKTETQ
Trigger: CTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAA...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGAAGACTTTTAGACCTTaGTCACCTCCGGAAAGCATG +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQKTFRP*SPPESM
Trigger: CATGCTTTCCGGAGGTGAGCAAGGTCTAAAAGTCTT...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676243.1
CDS-3UTR CCA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGGAGAGGGAAGCAACTTaGATGATCAGCTGGGCAAAA +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLEREAT*MISWAK
Trigger: TTTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTC...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATACTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFILSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATCTTTCCCATTGGTCCTaGCAGTGGTTTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDLSHWS*QWFQHQ
Trigger: CTGATGCTGAAACCACTGCCAGGACCAATGGGAAAG...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LVAMTKSTIYSSVPYHSYDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...GTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATAGCCTGTCACACCTCTaGTTTTTATGGTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYSLSHL*FLWSPV
Trigger: GACAGGTGACCATAAAAACCAGAGGTGTGACAGGCT...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGCTCATCTGCACCCTTaGAAACAGCTTCTCACACCA +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFAHLHP*KQLLTP
Trigger: TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGGATTTAAATCCAGGTaGACAGAAACTAATTATTCG +
Preference number: 4 (lower is better)
Translates to: ELETGTGKRPIPYICHGLGFKSR*TETNYS
Trigger: CGAATAATTAGTTTCTGTCCACCTGGATTTAAATCC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTTCCTTTCAGCCAGCATaGCTTTTTCTCTTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSSFQPA*LFLFPE
Trigger: TTCTGGAAAGAGAAAAAGCCATGCTGGCTGAAAGGA...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480206.2
3UTR CAA 72 bp GAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTaGTGCAGGCAAGCGGAGGAAAGTTTTCAAAAGAAT +
Preference number: 4 (lower is better)
Translates to: EQMFQFLNFHRL*CRQAEESFQKN
Trigger: ATTCTTTTGAAAACTTTCCTCCGCTTGCCTGCACAAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TCAACACGTGCCATTAGTGTGCAGCGCTTCCTTTGTCTTTTCTGTTTTGTAACTACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: STRAISVQRFLCLFCFVTTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...AGTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACACTAATGGCACGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR TCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTACCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTTSVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGGT...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000675803.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCATTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTTGTCTTCCAGCCTTTaGATCTCCTCAGCTGTCACT +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSLSSSL*ISSAVT
Trigger: AGTGACAGCTGAGGAGATTCAAAGGCTGGAAGACAA...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCTTCAGCATCAGGGTCTaGAGCTGCAGAATCATTGTC +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFFSIRV*SCRIIV
Trigger: GACAATGATTCTGCAGCTTCAGACCCTGATGCTGAA...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGCACACGGGCAGATGTaGCTGAAGTATTTACAAAAC +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKAHGQM*LKYLQN
Trigger: GTTTTGTAAATACTTCAGTCACATCTGCCCGTGTGC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGCATGGCTTGACATCTaGACAATGTCCCTGGTTTGT +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFAWLDI*TMSLVC
Trigger: ACAAACCAGGGACATTGTTCAGATGTCAAGCCATGC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGAGATGTTTCAGTTCCTaGATTTCCATCGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRRCFSS*ISIAFC
Trigger: ACAAAAGGCGATGGAAATTCAGGAACTGAAACATCT...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TTTGAGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTAAGATGTTTCAGTTCCTaGATTTCCATCGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: FEKWPLFASHFTRCFRMLRCFSS*ISIAFC
Trigger: ACAAAAGGCGATGGAAATTCAGGAACTGAAACATCT...TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAATCAGTGTCCAGTCTTaGTTTGATATGCTGGTATCT +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSISVQS*FDMLVS
Trigger: AGATACCAGCATATCAAATCAAGACTGGACACTGAT...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675168.1
CDS-3UTR GCA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: FGKCPLISLQCCKTETQRSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: HLRYYLNFGHHCCSGCCSFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTTTGGTATGGGGCTCTaGTTTCTTCACTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMFGMGL*FLHWPF
Trigger: AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: AMTKSTIYSSVPYHSYDHCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...GTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACACCCAACTTGGGAAATaGTCAGGGGTTCTGAAAAGA +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDTQLGK*SGVLKR
Trigger: TCTTTTCAGAACCCCTGAGCATTTCCCAAGTTGGGT...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp GAAGCAACTTGGATGATCAGCTGGGCAAAAGTTGTAACTTTTAGTCTCTTGAAAAACCTAAGGCTCATCTaGACCCTTGGAAACAGCTTC +
Preference number: 4 (lower is better)
Translates to: EATWMISWAKVVTFSLLKNLRLI*TLGNSF
Trigger: GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTT...TTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp ACCAGTCTCCTGTGGCTCCCCCAAATCATCTCGACAGAAAAGAAGAGAGAAGTTTTCAACATTCATAATTaGACAAAGCATCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: TSLLWLPQIISTEKKREVFNIHN*TKHHWS
Trigger: TGACCAGTGATGCTTTGTGCAATTATGAATGTTGAA...AACTTCTCTCTTCTTTTCTGTCGAGATGATTTGGGGGAGCCACAGGAGACTGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TTTGAGAAGTGGCCTCTCTTTGCCTCACATTTTACCAGGTGCTTCAGGATGTTAAAACACATAAAATCATaGACCGAATCCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: FEKWPLFASHFTRCFRMLKHIKS*TESCSA
Trigger: GGCAGAACAGGATTCGGTGCATGATTTTATGTGTTT...TAACATCCTGAAGCACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTAAACACATAAAATCATaGACCGAATCCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSKHIKS*TESCSA
Trigger: GGCAGAACAGGATTCGGTGCATGATTTTATGTGTTT...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGACACAGGTGAGAATTTaGTTCTGTACAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLTQVRI*FCTEQR
Trigger: TCTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGT...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGAGGAGAACATGGTTGTaGCCACCCAGAGTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVRRTWL*PPRVRS
Trigger: GCTTCTCACTCTGGGTGGGCACAACCATGTTCTCCT...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTTCATCAGATACTGGTaGACCTTGTGGGTAACCATA +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTFIRYW*TLWVTI
Trigger: TATGGTTACCCACAAGGTGCACCAGTATCTGATGAA...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541543.6
CDS-3UTR CCA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAGAAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: EKIVLLRQILPRSSYQQDDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...GTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675596.1
ENST00000675649.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGATTTCCTTTCCCATTaGTCCTGGCAGTGGTTTCAG +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIDFLSH*SWQWFQ
Trigger: CTGAAACCACTGCCAGGACCAATGGGAAAGGAAATC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCAAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: HCSRQSCNWVTVSSNNVARQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...TGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGGAAATGACCCAACTTaGGAAATGCTCAGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSGNDPT*EMLRGS
Trigger: AGAACCCCTGAGCATTTCCCAAGTTGGGTCATTTCC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGCAGGTCTGGCTGACCTaGCTTTCCACATATATACAG +
Preference number: 4 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKQVWLT*LSTYIQ
Trigger: CTGTATATATGTGGAAAGCCAGGTCAGCCAGACCTG...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGTATTATTTAAACTTTaGCCATCACTGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGVLFKL*PSLLFR
Trigger: CCTGAACAGCAGTGATGGCCAAAGTTTAAATAATAC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCGTCATAACTTTGTTCTGTTTTCTTaGTCGAGTAGCCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NFCPSNMDGLKLGNGRHNFVLFS*SSSLKS
Trigger: AGACTTTAGGCTACTCGACCAAGAAAACAGAACAAA...GTTATGACGCCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGGTGATTTTCACTCTCTaGGAGCTTATAGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQVIFTL*ELIVKI
Trigger: TATTTTGACTATAAGCTCCCAGAGAGTGAAAATCAC...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AAACAACCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAAAATACTTCCCAATTTaGTCTGAGTTTCTGCACACC +
Preference number: 4 (lower is better)
Translates to: KQPDYSNSAVQTQSATDSKYFPI*SEFLHT
Trigger: GGTGTGCAGAAACTCAGACCAAATTGGGAAGTATTT...TGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CCA 90 bp CCTCTGAGCCTCTATAGCACTCGGCTTACAACTCACAAGGCATTTATCACTGTACTTCCTTGCTTTAATTaGACAAATGAGATAGCAGGA +
Preference number: 4 (lower is better)
Translates to: PLSLYSTRLTTHKAFITVLPCFN*TNEIAG
Trigger: TCCTGCTATCTCATTTGTCCAATTAAAGCAAGGAAG...TACAGTGATAAATGCCTTGTGAGTTGTAAGCCGAGTGCTATAGAGGCTCAGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
3UTR CAA 72 bp ATTCATGAACACTTATTAAGGGCCACTGTCACAGGGTaGGTGATTTTCACTCTCTGGGAGCTTATAGTCAAA +
Preference number: 4 (lower is better)
Translates to: IHEHLLRATVTG*VIFTLWELIVK
Trigger: TTTGACTATAAGCTCCCAGAGAGTGAAAATCACCAACCCTGTGACAGTGGCCCTTAATAAGTGTTCATGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CAA 72 bp TTACATGGGATTCTGAGAATTCCACAAGAAATCCTTTaGCTCGAGTCTTCAGCATTAGGGCTTTGTGACAGA +
Preference number: 4 (lower is better)
Translates to: LHGILRIPQEIL*LESSALGLCDR
Trigger: TCTGTCACAAAGCCCTAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGGAATTCTCAGAATCCCATGTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR TCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGAGGGGGAGCATTCAGTaGGTGTACAGCTACTTTCCT +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVRGSIQ*VYSYFP
Trigger: AGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCT...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGGCATTAGCAAAGGCTaGACTAAGTTCTCAGGCAAT +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSGISKG*TKFSGN
Trigger: ATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGCACAGGAAAAATCCCTaGGCAACTAATGAATGTTAT +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRHRKNP*ATNECY
Trigger: ATAACATTCATTAGTTGCTCAGGGATTTTTCCTGTG...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTGACCTTTGCGTGCTaGATTTGGGAGGATACTTTA +
Preference number: 4 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDVTFAC*IWEDTL
Trigger: TAAAGTATCCTCCCAAATTCAGCACGCAAAGGTCAC...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KYAVNNREETRACHTSGFSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCATGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: HCSRQSCNWVTVSSNNVACSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...TGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR GCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACTTTACTTCCAGGGTTTaGCTTGCAGGTGACCACTGC +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINFTSRV*LAGDHC
Trigger: GCAGTGGTCACCTGCAAGGCAAACCCTGGAAGTAAA...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCACTGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: CSRQSCNWVTVSSNNVALTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: LKYAVNNREETRACHTSGVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGTATTATTTAAACTTTaGCCATCACTGCTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSVLFKL*PSLLFR
Trigger: CCTGAACAGCAGTGATGGCCAAAGTTTAAATAATAC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CATTTAAGGTATTATTTAAACTTTGGCCATCACTGCTGTTCAGGGTGCTGTAGTAACCTACTCTTAAGATaGGGGTGGTGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: HLRYYLNFGHHCCSGCCSNLLLR*GWCVTF
Trigger: AAAGGTCACACACCACCCCCATCTTAAGAGTAGGTT...ACTACAGCACCCTGAACAGCAGTGATGGCCAAAGTTTAAATAATACCTTAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATAACCTACTCTTAAGATaGGGGTGGTGTGTGACCTTT +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYNLLLR*GWCVTF
Trigger: AAAGGTCACACACCACCCCCATCTTAAGAGTAGGTT...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAGGCTTTTCAAACCCTTaGTCAGAGACTGAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSGFSNP*SETEGK
Trigger: TTTGCCTTCAGTCTCTGACCAAGGGTTTGAAAAGCC...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGGACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCAC +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVDLRKA*RGFQIH
Trigger: GTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTC...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000223208.10
ENST00000541543.6
CDS-3UTR TCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATAGAAGTTTCTGGAAATaGCCCAACTTGGGAAATGCT +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYRSFWK*PNLGNA
Trigger: AGCATTTCCCAAGTTGGGTCATTTCCAGAAACTTCT...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGGGTTCATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: RVHCSRQSCNWVTVSSNNRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...ATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674630.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR TCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGCACAGGAAAAATCCCTaGGCAACTAATGAATGTTAT +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQHRKNP*ATNECY
Trigger: ATAACATTCATTAGTTGCTCAGGGATTTTTCCTGTG...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp CAGAGCATTTTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTAGTGACCTTTGCGTGCTaGATTTGGGAGGATACTTTA +
Preference number: 4 (lower is better)
Translates to: QSILALAKAELSSQAINLVTFAC*IWEDTL
Trigger: TAAAGTATCCTCCCAAATTCAGCACGCAAAGGTCAC...TAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCATATGTGCTACATATATaGCTCATATTGCTTCACGAC +
Preference number: 4 (lower is better)
Translates to: YSNSAVQTQSATDSVNESYVLHI*LILLHD
Trigger: GTCGTGAAGCAATATGAGTCATATATGTAGCACATA...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR GCA 90 bp AAATACGCATTCCCCAGAGCAGATGTTTCAGTTCCTGAATTTCCATCGCCTTTTAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KYAFPRADVSVPEFPSPFSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...AAAAGGCGATGGAAATTCAGGAACTGAAACATCTGCTCTGGGGAATGCGTATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCATGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: GERKVLTDYLQSRARRWSCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223208.10
ENST00000541543.6
CDS-3UTR GCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGAGTGTGGAAAAATGTaGATTTTTCTATCTATGCTG +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRECGKM*IFLSML
Trigger: CAGCATAGATAGAAAAATGCACATTTTTCCACACTC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp ATAAGGGTTCATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: IRVHCSRQSCNWVTVSSNDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCAACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: CHDKEHNLFLSPLSQLRSTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...TGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: QRAQFIPQSLITATITDHTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATAGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFIDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GAAGCAACTTGGATGATCAGCTGGGCAAAAGTTGTAACTTTTAGTCTCTTGAAAGATAAGGTTTGTCTTTaGTATGGGGCTCTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: EATWMISWAKVVTFSLLKDKVCL*YGALLS
Trigger: AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATC...TTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AGGGTTCATTGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: RVHCSRQSCNWVTVSSNNHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...ATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACAATGAACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACACATGCATACCTTTCTaGCTCCAGGAAATATCTAGT +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDTCIPF*LQEISS
Trigger: ACTAGATATTTCCTGGAGCCAGAAAGGTATGCATGT...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGACTCTAAAACAGAACTaGGCTGAATCTGAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRTLKQN*AESESY
Trigger: ATAACTTTCAGATTCAGCCCAGTTCTGTTTTAGAGT...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTACTCTAAAACAGAACTaGGCTGAATCTGAAAGTTAT +
Preference number: 4 (lower is better)
Translates to: RLKYAVNNREETRACHTSTLKQN*AESESY
Trigger: ATAACTTTCAGATTCAGCCCAGTTCTGTTTTAGAGT...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGGATTTAAATCCAGGTaGACAGAAACTAATTATTCG +
Preference number: 4 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRGFKSR*TETNYS
Trigger: CGAATAATTAGTTTCTGTCCACCTGGATTTAAATCC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACCTCATCAGACTGTTGTaGAAATTAAATGGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHLIRLL*KLNGSK
Trigger: TTTTGACCCATTTAATTTCCACAACAGTCTGATGAG...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCT +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVPSGNF*AKTFRP
Trigger: AGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGG...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTAGAAGCTGGTTGCCATaGCAAAGAGCACAATTTATT +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIRSWLP*QRAQFI
Trigger: AATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCT...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR TCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCACAGGAAAAATCCCTaGGCAACTAATGAATGTTAT +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFHRKNP*ATNECY
Trigger: ATAACATTCATTAGTTGCTCAGGGATTTTTCCTGTG...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR TCA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAAGATGTTTCAGTTCCTaGATTTCCATCGCCTTTTGT +
Preference number: 4 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSRCFSS*ISIAFC
Trigger: ACAAAAGGCGATGGAAATTCAGGAACTGAAACATCT...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLSLDLI*WYLGFC
Trigger: ACAGAACCCAAGATACCAGCATATCAAATCAAGACT...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTGTTCTAGACAGAGTTaGAATTGGGTAACTGTAAGC +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMCSRQS*NWVTVS
Trigger: GCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR GCA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGTTCAACATTCATAATTaGACAAAGCATCACTGGTCA +
Preference number: 4 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQFNIHN*TKHHWS
Trigger: TGACCAGTGATGCTTTGTGCAATTATGAATGTTGAA...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGAAACACATAAAATCATaGACCGAATCCTGTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLKHIKS*TESCSA
Trigger: GGCAGAACAGGATTCGGTGCATGATTTTATGTGTTT...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCACACAGGTGAGAATTTaGTTCTGTACAGAACAAAGA +
Preference number: 4 (lower is better)
Translates to: SPLSQLRSQTIKINTALFTQVRI*FCTEQR
Trigger: TCTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGT...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACATCATCAGAAAAAGCTaGATTAATATGGCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDIIRKS*INMARP
Trigger: TGGCCTTGCCATATTAATGCAGCTTTTTCTGATGAT...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CCA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: SGVLKRGRTFICLSETKSDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGATATGCTGGTATCTTaGGTTCTGTGGTATCCTTTT +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLDMLVS*VLWYPF
Trigger: AAAAGGATACCACAGAACCCAAGATACCAGCATATC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACGGTTTGTCTTTGGTATaGGGCTCTGCTTTCTTCACT +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINGLSLV*GSAFFT
Trigger: AGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACC...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp GAAGCAACTTGGATGATCAGCTGGGCAAAAGTTGTAACTTTTAGTCTCTTGAAACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: EATWMISWAKVVTFSLLKHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATCACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTTGTCCAACCAAAGCTaGTATTTTCAACTGGCCATA +
Preference number: 4 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMLSNQS*YFQLAI
Trigger: TATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTTTGTTCTGTTTTCTTaGTCGAGTAGCCTAAAGTCT +
Preference number: 4 (lower is better)
Translates to: CSGVLKRGRTFICLSETKFVLFS*SSSLKS
Trigger: AGACTTTAGGCTACTCGACCAAGAAAACAGAACAAA...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
3UTR CAA 72 bp TATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGGTTCTGTGGTATCCTT +
Preference number: 4 (lower is better)
Translates to: YLVILLPVSSLD*ICWYLGFCGIL
Trigger: AAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR GCA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACTCACATTTTACCAGGTaGTTCAGGATGTTACACAGG +
Preference number: 4 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINSHFTR*FRMLHR
Trigger: CCTGTGTAACATCCTGAAGCACCTGGTAAAATGTGA...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATAGTATCTTGGGTTCTGTaGTATCCTTTTCATCAGATA +
Preference number: 4 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFIVSWVL*YPFHQI
Trigger: TATCTGATGAAAAGGATACCACAGAACCCAAGATAC...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGACTTGGATGATCAGCTaGGCAAAAGTTGTAACTTTT +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLTWMIS*AKVVTF
Trigger: AAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGT...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGAGACAGAGTTGCAATTaGGTAACTGTAAGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVRQSCN*VTVSSN
Trigger: GTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCT...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000223208.10
ENST00000541543.6
CDS-3UTR CCA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACGCAAAGCAAGCACTGTaGAGAAATACACATAAATAT +
Preference number: 4 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDAKQAL*RNTHKY
Trigger: ATATTTATGTGTATTTCTCCACAGTGCTTGCTTTGC...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATGTGATTTTCACTCTCTaGGAGCTTATAGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: PLSQLRSQTIKINTALFHVIFTL*ELIVKI
Trigger: TATTTTGACTATAAGCTCCCAGAGAGTGAAAATCAC...ATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGTGATTTTCACTCTCTaGGAGCTTATAGTCAAAATA +
Preference number: 4 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYVIFTL*ELIVKI
Trigger: TATTTTGACTATAAGCTCCCAGAGAGTGAAAATCAC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp GGAGAAAGAAAGGTTCTTACTGATTATCTTCAGAGTAGAGCAAGAAGGTGGTCACTCATCAGACTGTTGTaGAAATTAAATGGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: GERKVLTDYLQSRARRWSLIRLL*KLNGSK
Trigger: TTTTGACCCATTTAATTTCCACAACAGTCTGATGAG...TGACCACCTTCTTGCTCTACTCTGAAGATAATCAGTAAGAACCTTTCTTTCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCGGTTTACTGAATGAATaGCTAGACCTATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RSQTIKINTALFHLISEFGLLNE*LDLSGK
Trigger: TTTTCCTGATAGGTCTAGCCATTCATTCAGTAAACC...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp AGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTTTTGTTTTCAAATAAGGGTTTACTGAATGAATaGCTAGACCTATCAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RLSLTLLQPRVFLLFSNKGLLNE*LDLSGK
Trigger: TTTTCCTGATAGGTCTAGCCATTCATTCAGTAAACC...CTTATTTGAAAACAAAAGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGTTTTCAGAAGCTGGTTaGCATGACAAAGAGCACAAT +
Preference number: 4 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVFSEAG*HDKEHN
Trigger: ATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAA...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR GCA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGAGTGTGGAAAAATGTaGATTTTTCTATCTATGCTG +
Preference number: 4 (lower is better)
Translates to: LSQLRSQTIKINTALFHLECGKM*IFLSML
Trigger: CAGCATAGATAGAAAAATGCACATTTTTCCACACTC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CCA 90 bp CTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTTACTTCCACACCTCTGGTTTTTATaGTCACCTGTCAAAATCCTT +
Preference number: 4 (lower is better)
Translates to: LKRGRTFICLSETKSLLPHLWFL*SPVKIL
Trigger: AAGGATTTTGACAGGTGACCATAAAAACCAGAGGTG...TGGAAGTAAAGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CCA 90 bp TCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: SQLRSQTIKINTALFHLIVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...AATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CCA 90 bp CAGAGCATTTTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTAGTTCCCCCAATTAAATaGAATGAATGTCAGTCATTT +
Preference number: 4 (lower is better)
Translates to: QSILALAKAELSSQAINLVPPIK*NECQSF
Trigger: AAATGACTGACATTCATTCCATTTAATTGGGGGAAC...TAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS TCA 90 bp GCCTTCCGGGCGGCGGAAGTCGCTGGCTGCTCTTCCCTGCCCACATaGGCCTTTTCCGGTGCGCCCGCCCCCTCCGGCTCTCCGGCCGAG +
Preference number: 5 (lower is better)
Translates to: AFRAAEVAGCSSLPT*AFSGAPAPSGSPAE
Trigger: CTCGGCCGGAGAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCCCGGAAGGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS GCA 90 bp CCCTTCCCGCCTTCCGGGCGGCGGAAGTCGCTGGCTGCTCTTCCCTaGCCACATGAGCCTTTTCCGGTGCGCCCGCCCCCTCCGGCTCTC +
Preference number: 5 (lower is better)
Translates to: PFPPSGRRKSLAALP*PHEPFPVRPPPPAL
Trigger: GAGAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCCCGGAAGGCGGGAAGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS CCA 90 bp CTCCTCACGCCGGCCCCTTCCCGCCTTCCGGGCGGCGGAAGTCGCTaGCTGCTCTTCCCTGCCCACATGAGCCTTTTCCGGTGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: LLTPAPSRLPGGGSR*LLFPAHMSLFRCAR
Trigger: GCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCCCGGAAGGCGGGAAGGGGCCGGCGTGAGGAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS CCA 90 bp GGGCAACGCGGGACGCCGGCTAGCGAGGCCTTTTGTTCTCTGGGCTaGGGCTCGCCGGCTCCAGCCTTAGGGCGGGAAGAGAGGCGCGGG +
Preference number: 5 (lower is better)
Translates to: GQRGTPASEAFCSLG*GSPAPALGREERRG
Trigger: CCCGCGCCTCTCTTCCCGCCCTAAGGCTGGAGCCGGCGAGCCCCAGCCCAGAGAACAAAAGGCCTCGCTAGCCGGCGTCCCGCGTTGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676312.1
CDS GCA 90 bp GGAAGTCGCTGGCTGCTCTTCCCTGCCCACATGAGCCTTTTCCGGTaGGCCCGCCCCCTCCGGCTCTCCGGCCGAGACCTGGCCCTCACC +
Preference number: 5 (lower is better)
Translates to: GSRWLLFPAHMSLFR*ARPLRLSGRDLALT
Trigger: GGTGAGGGCCAGGTCTCGGCCGGAGAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR CAA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GWRGRHLADSERFGHQAPRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: GLSGWRGRHLADSERFGHGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGGCCTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GVALWGWIVSGQTQEEGPRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...AGGCCCTTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GWRGRHLADSERFGHQAPSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...AGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGAGGAAGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LVGVALWGWIVSGQTQEEGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...TTCCTCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: GLSGWRGRHLADSERFGHLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCACAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: FSAGRGGPLGLDRFRADPQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...TGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: GLSGWRGRHLADSERFGHQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...GTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGGAGACTGTAAGCCATTaGAGGGCAAGGGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GGLSGWRGRHLADSERFGETVSH*RARAVS
Trigger: AGACACAGCCCTTGCCCTCAAATGGCTTACAGTCTC...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CAA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTTACCCTCTTCTCCGATaGGCCCGTCTTCCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGYPLLR*ARLPRP
Trigger: CGGCCGGGGAAGACGGGCCAATCGGAGAAGAGGGTA...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGGGGTTTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: GGLSGWRGRHLADSERFGREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...CCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAAACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: GRHLADSERFGHQAPWTLSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...GAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAGGACTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SAGRGGPLGLDRFRADPGLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...TCCTGGGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp ATACTGACCACAAGTGAGGGCCGCTTTGGTGGGCTTCAAGGGGCACAGGCCGGTTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ILTTSEGRFGGLQGAQAGWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...ACCGGCCTGTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTGTGGTCAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGGCAGACCCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: YSQLVGVALWGWIVSGQTQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GGTCTGCCCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: GAATWQILSASGTRHLGLGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...GAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS GCA 90 bp TCTCTCATCTCAGGGTCGCAGAAGGGCAAGACGCCGCTCAATGGTTaGCAAGGGCAACGCGGGACGCCGGCTAGCGAGGCCTTTTGTTCT +
Preference number: 5 (lower is better)
Translates to: SLISGSQKGKTPLNG*QGQRGTPASEAFCS
Trigger: AGAACAAAAGGCCTCGCTAGCCGGCGTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGTCTTGCCCTTCTGCGACCCTGAGATGAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LADSERFGHQAPWTLFRRSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: HLADSERFGHQAPWTLFRSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ALASILKTGPAICWAESSRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTTTCCGGTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LHLFSAGRGGPLGLDRFRWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000480206.2
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGTCCGGAGGAGTTAGCTaGGTTCAGTCGGCCTCTGAA +
Preference number: 5 (lower is better)
Translates to: HLADSERFGHQAPWTLFRSGGVS*VQSASE
Trigger: TTCAGAGGCCGACTGAACCAAGCTAACTCCTCCGGA...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674539.1
CDS-3UTR CAA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TTGAGTGGCTGGCGGGGCCGCCACCTGGCAGATTCTGAGCGCTTCGGGCACCAGAAGGATGATCAGCCTTaGAAGTCCCAAGCAGAGTAT +
Preference number: 5 (lower is better)
Translates to: LSGWRGRHLADSERFGHQKDDQP*KSQAEY
Trigger: ATACTCTGCTTGGGACTTCAAAGGCTGATCATCCTT...CTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTGGCGGCCCCGCCAGCCACTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTTACCCTCTTCTCCGATaGGCCCGTCTTCCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: SSAPLETASHTKTARRSLYPLLR*ARLPRP
Trigger: CGGCCGGGGAAGACGGGCCAATCGGAGAAGAGGGTA...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: HLADSERFGHQAPWTLFRREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...CCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000492389.6
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGGGGCTGGATCGTGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: VNLHLFSAGRGGPLGLDRGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...ACGATCCAGCCCCAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GAVRIRFVFGMGLCFLHWRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...CCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GSQDKVCLWYGALLSSLARAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: WAMGVITDILTTSEGRFGRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSAPLETASHTKTARRSLWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: SSAPLETASHTKTARRSLQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: NNREETRACHTSGFYGHLGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCGGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: PESMKRFSNPRSHMVVAASGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...GGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: ELETGTGKRPIPYICHGLRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPERAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CGCACATGGTGGTGGCCGCCTGACTGGCCAGCCTTTCATCATCGTCATACAGAAGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: RTWWWPPDWPAFHHRHTEGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...TTCTGTATGACGATGATGAAAGGCTGGCCAGTCAGGCGGCCACCACCATGTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGAQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAGGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: LADSERFGHQAPWTLFRRLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000674539.1
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACCTGGCAGATTCTGAGCGCTTCGGGCACCAGGCACCTTGGACTCTCTTCCGGAAAGCAGAGTATCACCTaGCTCACCTCCGGAAAGCAT +
Preference number: 5 (lower is better)
Translates to: TWQILSASGTRHLGLSSGKQSIT*LTSGKH
Trigger: ATGCTTTCCGGAGGTGAGCAAGGTGATACTCTGCTT...TCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCGAAGCGCTCAGAATCTGCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp GGTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: GGVCRRLEPKAHLHPWKQCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCATCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGTCTTCTGGGGTAAATCTCCATTTATTCTCAGCTGGTAGGGGTGGCCCTTTGCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KSSGVNLHLFSAGRGGPLRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...CAAAGGGCCACCCCTACCAGCTGAGAATAAATGGAGATTTACCCCAGAAGACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000480206.2
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: ALASILKTGPAICWAESSGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...GGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: RLICTLGNSFSHQDCPEKGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...CTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: APALFMNCSGLGDCSPGFGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: NNREETRACHTSGFYGHLQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: LETASHTKTARRSLHEVKQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTGGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: VGSAGGWNLRLICTLGNSLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...GCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCACAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCAATTTCCATCGCCTTTaGTGCAGGCAAGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFNFHRL*CRQAEE
Trigger: TTCCTCCGCTTGCCTGCACAAAAGGCGATGGAAATT...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCGAAGTCTCTACATTTTaGCCTGGGCGTGGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAEVSTF*PGRGGS
Trigger: TGAGCCACCACGCCCAGGCAAAAATGTAGAGACTTC...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTCCGGAGGAGTTAGCTaGGTTCAGTCGGCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHSGGVS*VQSASG
Trigger: TCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGGA...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000492389.6
CDS TCA 90 bp GACTACGAGAAACCCCCAAGGAATAAAAGGTCAGGTCCACCTGTCTaGGTTCCCGGGAACGATGGACAAGCCCATTCCTACCGTCACACC +
Preference number: 5 (lower is better)
Translates to: DYEKPPRNKRSGPPV*VPGNDGQAHSYRHT
Trigger: GGTGTGACGGTAGGAATGGGCTTGTCCATCGTTCCCGGGAACTCAGACAGGTGGACCTGACCTTTTATTCCTTGGGGGTTTCTCGTAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS TCA 90 bp AAGGAGGATTCAGAGCAGGCCTGGACCTGGAAGTTCCAAGAGAAATaGAGGCAGTCAGGGCTGCCAGGAAGGCCTAAGCCTTCTCAAGAG +
Preference number: 5 (lower is better)
Translates to: KEDSEQAWTWKFQEK*RQSGLPGRPKPSQE
Trigger: CTCTTGAGAAGGCTTAGGCCTTCCTGGCAGCCCTGACTGCCTTCATTTCTCTTGGAACTTCCAGGTCCAGGCCTGCTCTGAATCCTCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675494.1
CDS-3UTR CAA 90 bp GGGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: GVCRRLEPKAHLHPWKQLCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...AAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCGGAAAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PESMKRFSNPRSHMVVAAFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...GGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEAFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: SAPLETASHTKTARRSLHSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: ICTLGNSFSHQDCPEKPSSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...TGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGATGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CISKQGLTRLSALTKDFGWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACATCCGTCCACAGCATTaGAGAAGTGGCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: AGGWNLRLICTLGNSFSHIRPQH*RSGLSL
Trigger: CAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGAT...GTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CCACAAATGCAGCAGGGGACTAGCGGTGAAACAGATGAAGAAACTGAAGGGTCCGCAAGGGCTGTGTCTTaGGGTACTTCGCTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: PQMQQGTSGETDEETEGSARAVS*GTSLLA
Trigger: TGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTGC...GGACCCTTCAGTTTCTTCATCTGTTTCACCGCTAGTCCCCTGCTGCATTTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CAA 90 bp AAGGGCTGTGTCTTTGGGTACTTCGCTCCTCGCAGTCACAAGTACTGGCGTGCGCCGTTTTCCAAAGGTTaGGTCAGCTTACTCCTGCTC +
Preference number: 5 (lower is better)
Translates to: KGCVFGYFAPRSHKYWRAPFSKG*VSLLLL
Trigger: GAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACGG...CGCACGCCAGTACTTGTGACTGCGAGGAGCGAAGTACCCAAAGACACAGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CAA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCACCTACCCCCACAACCTaGTTCAGCCGCCTCCCTATA +
Preference number: 5 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSPTPTT*FSRLPI
Trigger: TATAGGGAGGCGGCTGAACAAGGTTGTGGGGGTAGG...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674539.1
ENST00000675596.1
CDS-3UTR CAA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGCCTACCCCCACAACCTaGTTCAGCCGCCTCCCTATA +
Preference number: 5 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLPTPTT*FSRLPI
Trigger: TATAGGGAGGCGGCTGAACAAGGTTGTGGGGGTAGG...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000674539.1
ENST00000675596.1
CDS-3UTR CAA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGACGCCGCTCAATGGTaGCCAAGGGCAACGCGGGAC +
Preference number: 5 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLDAAQW*PRATRD
Trigger: GTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGTC...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS TCA 90 bp TTGAAGTCCCAAGCAGAGTATCACCTTGCTCACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCT +
Preference number: 5 (lower is better)
Translates to: LKSQAEYHLAHLRKA*RGFQIHARTWWWPP
Trigger: AGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTGAGCAAGGTGATACTCTGCTTGGGACTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480206.2
ENST00000603513.1
CDS-3UTR CAA 90 bp TCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SCVVYELLRARRLLTWISREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...GGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: AGRGSQDKVCLWYGALLSSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...AGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NNREETRACHTSGFYGHLLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: AHLHPWKQLLTPRLPGEALVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...GGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: SAPLETASHTKTARRSLHGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAACATGCTCTGAAGAGTaGAGCGGCTGGAGTCCCCTG +
Preference number: 5 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSTCSEE*SGWSPL
Trigger: CAGGGGACTCCAGCCGCTCAACTCTTCAGAGCATGT...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000477003.6
CDS-3UTR CAA 90 bp GGGTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCAGATACTGGTGCACCTaGTGGGTAACCATAGAGATT +
Preference number: 5 (lower is better)
Translates to: GSAGGWNLRLICTLGNSFRYWCT*WVTIEI
Trigger: AATCTCTATGGTTACCCACAAGGTGCACCAGTATCT...GAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541543.6
CDS-3UTR CAA 90 bp GAGAAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACGACGCCGCTCAATGGTaGCCAAGGGCAACGCGGGAC +
Preference number: 5 (lower is better)
Translates to: EKIVLLRQILPRSSYQQDDAAQW*PRATRD
Trigger: GTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGTC...GTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS CCA 90 bp GGGAACGATGGACAAGCCCATTCCTACCGTCACACCAGCAGGGACTaGATGGTTTCCCATCATGGAAACCACACAAGCTGGTATTCGTTT +
Preference number: 5 (lower is better)
Translates to: GNDGQAHSYRHTSRD*MVSHHGNHTSWYSF
Trigger: AAACGAATACCAGCTTGTGTGGTTTCCATGATGGGAAACCATCCAGTCCCTGCTGGTGTGACGGTAGGAATGGGCTTGTCCATCGTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS-3UTR CAA 90 bp CATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTGGCGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGG +
Preference number: 5 (lower is better)
Translates to: HEEVFKSTLAHGGGRLTGVSSLD*ICWYLG
Trigger: CCCAAGATACCAGCATATCAAATCAAGACTGGACAC...GCCAGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCCTTTCCCATTGGTCCTGGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGG +
Preference number: 5 (lower is better)
Translates to: NCSGLGDCSPGFPFPLVLVSSLD*ICWYLG
Trigger: CCCAAGATACCAGCATATCAAATCAAGACTGGACAC...CAGGACCAATGGGAAAGGAAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000484549.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SSAPLETASHTKTARRSLREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...AAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGCATGAAGAGGTTTTCAAATCCACGCTCGCACATGGTGGTGGCCGCCTGACTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: KHEEVFKSTLAHGGGRLTREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...AGTCAGGCGGCCACCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: NNREETRACHTSGFYGHLSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...CAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SHLWFLWSPVKILPEVASSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: LETASHTKTARRSLHEVKSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...CTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATATCCTGCTCTTCCTGTAGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: WYLGFCGILFIRYPALPVGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...TACAGGAAGAGCAGGATATCTGATGAAAAGGATACCACAGAACCCAAGATACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: SHLWFLWSPVKILPEVASSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAACTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: QQDRQFSVGFSEAGCHDKLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...TTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QKLVAMTKSTIYSSVPYHWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...GTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: SAGGWNLRLICTLGNSFSLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...TGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCTCCTGCGTTGTTTATGAACTGCTCAGGGCTCGGCGACTGCTCACCTGGATTTCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: APALFMNCSGLGDCSPGFLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...AAATCCAGGTGAGCAGTCGCCGAGCCCTGAGCAGTTCATAAACAACGCAGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTGGTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: WAMGVITDILTTSEGRFGGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...ACCAAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAACAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAAGGGTGGATCACAGTaGCAATTAGGGGTTAGATGG +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPKGGSQ*QLGVRW
Trigger: CCATCTAACCCCTAATTGCAACTGTGATCCACCCTT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTGCAAGGGCTGTGTCTTaGGGTACTTCGCTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFARAVS*GTSLLA
Trigger: TGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTGC...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484549.6
CDS-3UTR CAA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAAGGAGGCAGGATTGCTaGAGCCCAGGAGTTCCGGAC +
Preference number: 5 (lower is better)
Translates to: FGKCPLISLQCCKTETQRRRQDC*SPGVPD
Trigger: GTCCGGAACTCCTGGGCTCAAGCAATCCTGCCTCCT...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CAA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: GSQDKVCLWYGALLSSLAREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AGCTGGGCAATGGGCGTCATAACTGATATACTGACCACAAGTGAGGGCCGCTTTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: SWAMGVITDILTTSEGRFREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...AAAGCGGCCCTCACTTGTGGTCAGTATATCAGTTATGACGCCCATTGCCCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACACAGGCACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: TQALASILKTGPAICWAECHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTGCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAATGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: KAHLHPWKQLLTPRLPGECHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...TTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAAGAACATCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: KQLLTPRLPGEAFMKSRTSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...TGTTCTTGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGGGGAGAGGAACTATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: YGHLSKSFLRWPPEGRGTMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...AGTTCCTCTCCCCTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: VNNREETRACHTSGFYGHSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: VTSRTGNFQWAFQKLVAMGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...CATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: NREETRACHTSGFYGHLSGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TGTATTTCTAAGCAAGGGCTTACGAGGTTGTCAGCCCTGACAAAGGACTTCGGACAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: CISKQGLTRLSALTKDFGQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...TCCGAAGTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTGCTTAGAAATACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCACACCAAAAATTGGGCATGGCTaGACATCTGAACAATGTCCC +
Preference number: 5 (lower is better)
Translates to: RRLEPKAHLHPWKQLLTPKIGHG*TSEQCP
Trigger: GGGACATTGTTCAGATGTCAAGCCATGCCCAATTTT...TGGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp GTCTGCAGGCGGCTGGAACCTAAGGCTCATCTGCACCCTTGGAAACAGCTTCTCTTATATTCCACACATTaGCGGTGTTTCCTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VCRRLEPKAHLHPWKQLLLYSTH*RCFLGK
Trigger: TTTCCCCAGGAAACACCGCAAATGTGTGGAATATAA...GAGAAGCTGTTTCCAAGGGTGCAGATGAGCCTTAGGTTCCAGCCGCCTGCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTGCCACTGTCACAGGGTaGGTGATTTTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: ELETGTGKRPIPYICHGLATVTG*VIFTLW
Trigger: CCAGAGAGTGAAAATCACCAACCCTGTGACAGTGGC...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp TCTGCACCCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATAAAAACCTCAGGGTTTaGAATGCCTCGCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: SAPLETASHTKTARRSLHKNLRV*NASPTK
Trigger: CTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTT...ATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGGGTGCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCGAGACTGTAAGCCATTaGAGGGCAAGGGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: LSHLWFLWSPVKILPEVAETVSH*RARAVS
Trigger: AGACACAGCCCTTGCCCTCAAATGGCTTACAGTCTC...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CAA 90 bp CACTGGCTTCCATACTCAAAACAGGGCCTGCAATATGCTGGGCAGAGAGCTCCTTCTCTGGTCATCAAGTaGAGGCCAACACAAGGACAT +
Preference number: 5 (lower is better)
Translates to: HWLPYSKQGLQYAGQRAPSLVIK*RPTQGH
Trigger: ATGTCCTTGTGTTGGCCTCAACTTGATGACCAGAGA...AGGAGCTCTCTGCCCAGCATATTGCAGGCCCTGTTTTGAGTATGGAAGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCCTCCACTACTTCCTaGGTAGAGAGGATGCAGACG +
Preference number: 5 (lower is better)
Translates to: ELETGTGKRPIPYICHGLSSTTS*VERMQT
Trigger: CGTCTGCATCCTCTCTACCAAGGAAGTAGTGGAGGA...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGTCCGGAGGAGTTAGCTaGGTTCAGTCGGCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVSGGVS*VQSASG
Trigger: TCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGGA...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675596.1
CDS-3UTR CAA 90 bp AGACTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTTCCGGAGGAGTTAGCTaGGTTCAGTCGGCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: RLKYAVNNREETRACHTSSGGVS*VQSASG
Trigger: TCCGGAGGCCGACTGAACCAAGCTAACTCCTCCGGA...AGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000675962.1
CDS CCA 90 bp ACGATGGACAAGCCCATTCCTACCGTCACACCAGCAGGGACTGGATaGTTTCCCATCATGGAAACCACACAAGCTGGTATTCGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: TMDKPIPTVTPAGTG*FPIMETTQAGIRFF
Trigger: AAAGAAACGAATACCAGCTTGTGTGGTTTCCATGATGGGAAACCATCCAGTCCCTGCTGGTGTGACGGTAGGAATGGGCTTGTCCATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS-3UTR CAA 90 bp GTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCCACAGGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGG +
Preference number: 5 (lower is better)
Translates to: VVSPDKGLRSPLHLVCPQVSSLD*ICWYLG
Trigger: CCCAAGATACCAGCATATCAAATCAAGACTGGACAC...CTGTGGACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: ELETGTGKRPIPYICHGLREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: NREETRACHTSGFYGHLSREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CATCTAGCAGCAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: HLAAGRGSQDKVCLWYGACHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...AGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTGCTGCTAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp ACAGCAGACACAGGCGGTGGAAATGTGGAAATACGCATTCCCCAGAGCAGATGTTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: TADTGGGNVEIRIPQSRCCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...ACATCTGCTCTGGGGAATGCGTATTTCCACATTTCCACCGCCTGTGTCTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 8 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ELETGTGKRPIPYICHGLFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAATTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: SGVLKRGRTFICLSETKSGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATGGTAGGGGTGGCCCTTaGGGGCTGGATCGTTTCCGG +
Preference number: 5 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYGRGGP*GLDRFR
Trigger: CCGGAAACGATCCAGCCCCAAAGGGCCACCCCTACC...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCTTGGAAACAGCTTCTCACACCAAGACTGCCCGGAGAAGCCTTCATGAAGTCAATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: PWKQLLTPRLPGEAFMKSMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...TGACTTCATGAAGGCTTCTCCGGGCAGTCTTGGTGTGAGAAGCTGTTTCCAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LQEISSKGEHSVSVQLLSSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...GGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SGVLKRGRTFICLSETKSRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...AGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCCGGGCACCAGGCACCTaGGACTCTCTTCCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RSQTIKINTALFHLISEFRAPGT*DSLPEE
Trigger: CTCCTCCGGAAGAGAGTCCAAGGTGCCTGGTGCCCG...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TGTTCTAGACAGAGTTGCAATTGGGTAACTGTAAGCTCCAACAATGTGGCACTGCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: CSRQSCNWVTVSSNNVALLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...CAGTGCCACATTGTTGGAGCTTACAGTTACCCAATTGCAACTCTGTCTAGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CSGVLKRGRTFICLSETKWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: GSQDKVCLWYGALLSSLALVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...GGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCACAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: LKYAVNNREETRACHTSGQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCAATTTCCATCGCCTTTaGTGCAGGCAAGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: LSHLWFLWSPVKILPEVANFHRL*CRQAEE
Trigger: TTCCTCCGCTTGCCTGCACAAAAGGCGATGGAAATT...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS TCA 90 bp ATCAAAGTCCCAGTCCCTGGGAACAGACAGCAAATGTGTACAGGGTaGGTGTTTCAGTCAAATGGTCAGCCTGTTATTTTCCCCACACCC +
Preference number: 5 (lower is better)
Translates to: IKVPVPGNRQQMCTG*VFQSNGQPVIFPTP
Trigger: GGGTGTGGGGAAAATAACAGGCTGACCATTTGACTGAAACACTCACCCTGTACACATTTGCTGTCTGTTCCCAGGGACTGGGACTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498527.5
CDS TCA 90 bp CAGTCAGGGCTGCCAGGAAGGCCTAAGCCTTCTCAAGAGAGACACTaGATACCTCTTAGAAGAGGCCCAAATATCACCAAGATTAGAACC +
Preference number: 5 (lower is better)
Translates to: QSGLPGRPKPSQERH*IPLRRGPNITKIRT
Trigger: GGTTCTAATCTTGGTGATATTTGGGCCTCTTCTAAGAGGTATTCAGTGTCTCTCTTGAGAAGGCTTAGGCCTTCCTGGCAGCCCTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675494.1
CDS-3UTR CAA 90 bp AATGAAAAGGTGGCAGGGACAGGCACACGGGCAGATGTGACTGAAGTATTTACAAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: NEKVAGTGTRADVTEVFTREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...TGTAAATACTTCAGTCACATCTGCCCGTGTGCCTGTCCCTGCCACCTTTTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: LSHLWFLWSPVKILPEVACHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...GGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: KYAVNNREETRACHTSGFSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCATCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCACTGGCCCTTTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: VRIRFVFGMGLCFLHWPFFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...AAAGGGCCAGTGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CAGGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: QEGAVRIRFVFGMGLCFLMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...AAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATATGGGCAGAGAGCTCCTaGCTGAGTGAGCCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: QPFIIVIQNDDLAMGIFIWAESS*LSEPAG
Trigger: CCCAGCAGGCTCACTCAGCAAGGAGCTCTCTGCCCA...TATAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGCAAGTGAGGGCCGCTTaGGTGGGCTTCAAGGGGCAC +
Preference number: 5 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMQVRAA*VGFKGH
Trigger: GTGCCCCTTGAAGCCCACCAAAGCGGCCCTCACTTG...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAACTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: TGRRLEPVTPLVFMVTCQLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...TTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: KYAVNNREETRACHTSGFQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCAGCCATGATCCAGTTGTaGAAGGTGGCTTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: FTLCVHSCPTKAGIFNWPAMIQL*KVASVP
Trigger: TGGGACTGAAGCCACCTTCAACAACTGGATCATGGC...TGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTAGAAGTGGCCTCTCTTaGCCTCACATTTTACCAGGT +
Preference number: 5 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPRSGLS*PHILPG
Trigger: ACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCT...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTAAGGGTGGATCACAGTaGCAATTAGGGGTTAGATGG +
Preference number: 5 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTKGGSQ*QLGVRW
Trigger: CCATCTAACCCCTAATTGCAACTGTGATCCACCCTT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334451.6
CDS-3UTR CAA 90 bp GGAAGGGGCAGTCAGGATAAGGTTTGTCTTTGGTATGGGGCTCTGCTTTCTTCAAAGGGTGGATCACAGTaGCAATTAGGGGTTAGATGG +
Preference number: 5 (lower is better)
Translates to: GRGSQDKVCLWYGALLSSKGGSQ*QLGVRW
Trigger: CCATCTAACCCCTAATTGCAACTGTGATCCACCCTT...TGAAGAAAGCAGAGCCCCATACCAAAGACAAACCTTATCCTGACTGCCCCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000492389.6
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTACCCAGAGAGGGTGCTaGAGAATATACAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTTQRGC*RIYKNP
Trigger: AGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGT...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR CAA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGCAAGGGCTGTGTCTTaGGGTACTTCGCTCCTCGCA +
Preference number: 5 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTARAVS*GTSLLA
Trigger: TGCGAGGAGCGAAGTACCCAAAGACACAGCCCTTGC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CAA 90 bp TCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGG +
Preference number: 5 (lower is better)
Translates to: SHLWFLWSPVKILPEVASVSSLD*ICWYLG
Trigger: CCCAAGATACCAGCATATCAAATCAAGACTGGACAC...GGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACAGAAACCCAGAGAGGGTGCTTGAGAATATACAAGAACCCTGCGGTGGTGACTGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGG +
Preference number: 5 (lower is better)
Translates to: TETQRGCLRIYKNPAVVTVSSLD*ICWYLG
Trigger: CCCAAGATACCAGCATATCAAATCAAGACTGGACAC...AGTCACCACCGCAGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGTTTCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334451.6
ENST00000489512.5
CDS-3UTR CAA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGAAGCTGGGCAATGGGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: TGHNFCPSNMDGLKLGNGCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CCCATTGCCCAGCTTCAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: VNNREETRACHTSGFYGHCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...GTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LKYAVNNREETRACHTSGFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 15 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAATCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LSSSSISVSTQALASILKSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATCTTCCAGGGTTTGCCTaGCAGGTGACCACTGCTGAG +
Preference number: 5 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYLPGFA*QVTTAE
Trigger: CTCAGCAGTGGTCACCTGCAAGGCAAACCCTGGAAG...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTTTCCTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: LSSSSISVSTQALASILKGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...TTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAGGAAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTGAGAAAATTGGGCATGGCTaGACATCTGAACAATGTCCC +
Preference number: 5 (lower is better)
Translates to: TSGFYGHLSKSFLRWPPEKIGHG*TSEQCP
Trigger: GGGACATTGTTCAGATGTCAAGCCATGCCCAATTTT...CTCAGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGCCATGATCCAGTTGTaGAAGGTGGCTTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: QWAFQKLVAMTKSTIYSSAMIQL*KVASVP
Trigger: TGGGACTGAAGCCACCTTCAACAACTGGATCATGGC...TGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCAGAAGCTGTTATATTCCACACATTaGCGGTGTTTCCTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: PVAVTSRTGNFQWAFQKLLYSTH*RCFLGK
Trigger: TTTCCCCAGGAAACACCGCAAATGTGTGGAATATAA...CAGCTTCTGAAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ACGAGGTTGTCAGCCCTGACAAAGGACTTCGGAGTCCTCTTCACCTTGTGTGTCTACACAGGTGAGAATTaGCTTCTGTACAGAACAAAG +
Preference number: 5 (lower is better)
Translates to: TRLSALTKDFGVLFTLCVYTGEN*LLYRTK
Trigger: CTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGTA...GACACACAAGGTGAAGAGGACTCCGAAGTCCTTTGTCAGGGCTGACAACCTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCTTTGCGTGCTGAATTaGGGAGGATACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCLCVLN*GGYFKP
Trigger: AGGCTTAAAGTATCCTCCCAAATTCAGCACGCAAAG...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACAGAAGGGTGGATCACAGTaGCAATTAGGGGTTAGATGG +
Preference number: 5 (lower is better)
Translates to: PFWLQEISSKGEHSVSVQKGGSQ*QLGVRW
Trigger: CCATCTAACCCCTAATTGCAACTGTGATCCACCCTT...CTGTACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TGGGATTCTGAGAATTCCACAAGAAATCCTTTTGCTCGAGTCTTCAGCATTAGGGCCAAGATCATCCCATaGCATTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: WDSENSTRNPFARVFSIRAKIIP*HSSLGD
Trigger: GTCACCCAGGCTGGAATGCAATGGGATGATCTTGGC...CCTAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGGAATTCTCAGAATCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp AAAATAGTACTGTTAAGGCAAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGAGATACCCCACAACCTaGTTCAGCCGCCTCCCTATA +
Preference number: 5 (lower is better)
Translates to: KIVLLRQILPRSSYQQDRRYPTT*FSRLPI
Trigger: TATAGGGAGGCGGCTGAACAAGGTTGTGGGGTATCT...CCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTTGCCTTAACAGTACTATTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676312.1
CDS-3UTR CAA 90 bp TCCCATTGGTCCTGGCAGTGGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCATTCTGTCTGCCTCCGCTaGAATCTAAACTCTTTAACA +
Preference number: 5 (lower is better)
Translates to: SHWSWQWFQHQGLKLQNHSVCLR*NLNSLT
Trigger: TGTTAAAGAGTTTAGATTCAAGCGGAGGCAGACAGA...ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS CCA 90 bp CAGGCACTTCAGAAGGGTGGATCACAGTTGCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTGAGGGTTTTTGTGGCAGAAGAAACA +
Preference number: 5 (lower is better)
Translates to: QALQKGGSQLQLGVR*VEMKELRVFVAEET
Trigger: TGTTTCTTCTGCCACAAAAACCCTCAGCTCTTTCATCTCTACCCATCTAACCCCTAATTGCAACTGTGATCCACCCTTCTGAAGTGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000334451.6
CDS-3UTR CAA 90 bp GTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATTCCTCAGTAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: VGFSEAGCHDKEHNLFLSREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...ACTGAGGAATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGGCCATAATAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: PCVSTVVQPKLVFSTGHNREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...ATTATGGCCAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACTGGCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: TGQPFIIVIQNDDLAMGICHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...AATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGCCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CCTCTTCACCTTGTGTGTCCACAGTTGTCCAACCAAAGCTGGTATTTTCAACTGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: PLHLVCPQLSNQSWYFQLCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CAGTTGAAAATACCAGCTTTGGTTGGACAACTGTGGACACACAAGGTGAAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPICHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGTCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: KLVFSTGHNFCPSNMDGLSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...CAGTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: CSGVLKRGRTFICLSETKGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: LKYAVNNREETRACHTSGLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AAATCTTACCCCGTAGCAGTTACCAGCAGGACAGGCAATTTTCAGTGGGCTTTTCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: KSYPVAVTSRTGNFQWAFLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...AAAAGCCCACTGAAAATTGCCTGTCCTGCTGGTAACTGCTACGGGGTAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: QRAQFIPQSLITATITDHGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...ATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTTCAAAGCCAGAGCATTTaGGCATTAGCAAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: NWRQGQGRGLSHTYVMVFQSQSI*ALAKAE
Trigger: TTCAGCCTTTGCTAATGCCAAAATGCTCTGGCTTTG...AAAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGAAGTGGCCTCTCTTaGCCTCACATTTTACCAGGT +
Preference number: 5 (lower is better)
Translates to: TRACHTSGFYGHLSKSFLRSGLS*PHILPG
Trigger: ACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCT...CAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTAATCCGTCCACAGCATTaGAGAAGTGGCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVIRPQH*RSGLSL
Trigger: CAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGAT...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTAAAAACCTCAGGGTTTaGAATGCCTCGCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: LKYAVNNREETRACHTSGKNLRV*NASPTK
Trigger: CTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTT...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp TCAACACGTGCCATTAGTGTGCAGCGCTTCCTTTGTCTTTTCTGTTTTGTAACTGAGACTGTAAGCCATTaGAGGGCAAGGGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: STRAISVQRFLCLFCFVTETVSH*RARAVS
Trigger: AGACACAGCCCTTGCCCTCAAATGGCTTACAGTCTC...AGTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACACTAATGGCACGTGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS-3UTR CAA 90 bp AACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTCATGTGCAGCGCTTCCTTaGTCTTTTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: NREETRACHTSGFYGHLSCAALP*SFLFCN
Trigger: GTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACA...TGACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CAA 90 bp CACACCTCTGGTTTTTATGGTCACCTGTCAAAATCCTTCCTGAGGTGGCCTCCTTGTGCAGCGCTTCCTTaGTCTTTTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: HTSGFYGHLSKSFLRWPPCAALP*SFLFCN
Trigger: GTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACA...AGGAGGCCACCTCAGGAAGGATTTTGACAGGTGACCATAAAAACCAGAGGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000484549.6
ENST00000675803.1
CDS-3UTR CAA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAAAGGCACGAACTCAGTaGCTAAGAGACAACTCCATG +
Preference number: 5 (lower is better)
Translates to: FGKCPLISLQCCKTETQRKARTQ*LRDNSM
Trigger: CATGGAGTTGTCTCTTAGCAACTGAGTTCGTGCCTT...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CAA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTAAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTATGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GCCAGCCTTTCATCATCGTCATACAGAATGATGATCTTGCCATGGGCATTTTTATTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: ASLSSSSYRMMILPWAFLFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...TAAAAATGCCCATGGCAAGATCATCATTCTGTATGACGATGATGAAAGGCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000477003.6
ENST00000484549.6
ENST00000492389.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGGGCTCATCTGCACCCTaGGAAACAGCTTCTCACACC +
Preference number: 5 (lower is better)
Translates to: LSQLRSQTIKINTALFHLGSSAP*ETASHT
Trigger: GGTGTGAGAAGCTGTTTCCAAGGGTGCAGATGAGCC...CAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CTCATCTTCAATTTCAGTGAGTACACAGGCACTGGCTTCCATACTCAAAACAGGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: LIFNFSEYTGTGFHTQNRLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CCTGTTTTGAGTATGGAAGCCAGTGCCTGTGTACTCACTGAAATTGAAGATGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATCAAGGGCTTACGAGGTaGTCAGCCCTGACAAAGGAC +
Preference number: 5 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDQGLTR*SALTKD
Trigger: GTCCTTTGTCAGGGCTGACAACCTCGTAAGCCCTTG...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GAACTGGAGACAGGGACAGGGAAGAGGCCTATCCCATACATATGTCATGGTCTTATGTCCCTGGTTTGTTaGATTTCTAAAGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: ELETGTGKRPIPYICHGLMSLVC*ISKASE
Trigger: TTCCGATGCTTTAGAAATCAAACAAACCAGGGACAT...AAGACCATGACATATGTATGGGATAGGCCTCTTCCCTGTCCCTGTCTCCAGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CCATCTGATTTCAGAGTTCCTCATCCTTACCTGAGGCCTTTTGTTCCCCCAATTCAAAGCCAGAGCATTTaGGCATTAGCAAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PSDFRVPHPYLRPFVPPIQSQSI*ALAKAE
Trigger: TTCAGCCTTTGCTAATGCCAAAATGCTCTGGCTTTG...AATTGGGGGAACAAAAGGCCTCAGGTAAGGATGAGGAACTCTGAAATCAGATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CTTAAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTCTAATACTCCAAAGTaGTCTGACGATGGGAACGCA +
Preference number: 5 (lower is better)
Translates to: LKYAVNNREETRACHTSGSNTPK*SDDGNA
Trigger: TGCGTTCCCATCGTCAGACAACTTTGGAGTATTAGA...ACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTTATGGTCACCTGTTACACAGGTGAGAATTaGCTTCTGTACAGAACAAAG +
Preference number: 5 (lower is better)
Translates to: TTGRRLEPVTPLVFMVTCYTGEN*LLYRTK
Trigger: CTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGTA...ACAGGTGACCATAAAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AAGGGGGAGCATTCAGTGAGTGTACAGCTACTTTCCTCATCTTCAATTTCAGTGAGAAGTGGCCTCTCTTaGCCTCACATTTTACCAGGT +
Preference number: 5 (lower is better)
Translates to: KGEHSVSVQLLSSSSISVRSGLS*PHILPG
Trigger: ACCTGGTAAAATGTGAGGCAAAGAGAGGCCACTTCT...CACTGAAATTGAAGATGAGGAAAGTAGCTGTACACTCACTGAATGCTCCCCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCGCCACTGTCACAGGGTaGGTGATTTTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: SPLSQLRSQTIKINTALFATVTG*VIFTLW
Trigger: CCAGAGAGTGAAAATCACCAACCCTGTGACAGTGGC...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS TCA 90 bp ATACAGAATGATGATCTTGCCATGGGCATTTTTCTAAGAGTCAGATaGGTTAAGGTTCCAAGGCACTGGGCTGATGTCCCAAGACTACGA +
Preference number: 5 (lower is better)
Translates to: IQNDDLAMGIFLRVR*VKVPRHWADVPRLR
Trigger: TCGTAGTCTTGGGACATCAGCCCAGTGCCTTGGAACCTTAACTCATCTGACTCTTAGAAAAATGCCCATGGCAAGATCATCATTCTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS CCA 90 bp AATACAGGAACAGTACGGCCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCAGGG +
Preference number: 5 (lower is better)
Translates to: NTGTVRPVSSLDLIC*YLGFCGILFIRYSG
Trigger: CCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGCCGTACTGTTCCTGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334451.6
ENST00000675813.1
ENST00000676115.1
CDS CCA 90 bp CTGTTACTTCAGAAGGGTGGATCACAGTTGCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTGAGGGTTTTTGTGGCAGAAGAAACA +
Preference number: 5 (lower is better)
Translates to: LLLQKGGSQLQLGVR*VEMKELRVFVAEET
Trigger: TGTTTCTTCTGCCACAAAAACCCTCAGCTCTTTCATCTCTACCCATCTAACCCCTAATTGCAACTGTGATCCACCCTTCTGAAGTAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000472739.6
ENST00000675813.1
CDS CCA 90 bp CACTTACTTCAGAAGGGTGGATCACAGTTGCAATTAGGGGTTAGATaGGTAGAGATGAAAGAGCTGAGGGTTTTTGTGGCAGAAGAAACA +
Preference number: 5 (lower is better)
Translates to: HLLQKGGSQLQLGVR*VEMKELRVFVAEET
Trigger: TGTTTCTTCTGCCACAAAAACCCTCAGCTCTTTCATCTCTACCCATCTAACCCCTAATTGCAACTGTGATCCACCCTTCTGAAGTAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000492389.6
ENST00000676115.1
CDS CCA 90 bp GTAAGATACACACAGGCACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCAGGG +
Preference number: 5 (lower is better)
Translates to: VRYTQAPVSSLDLIC*YLGFCGILFIRYSG
Trigger: CCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTGCCTGTGTGTATCTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS CCA 90 bp TGGGAACAGACAGCAAATGTGTACAGGGTGAGTGTTTCAGTCAAATaGTCAGCCTGTTATTTTCCCCACACCCTCAATTCTCATTACCTT +
Preference number: 5 (lower is better)
Translates to: WEQTANVYRVSVSVK*SACYFPHTLNSHYL
Trigger: AAGGTAATGAGAATTGAGGGTGTGGGGAAAATAACAGGCTGACCATTTGACTGAAACACTCACCCTGTACACATTTGCTGTCTGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498527.5
CDS-3UTR CAA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp TGCTCAGGGGTTCTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGAGAGAGGGAAGCAACTaGGATGATCAGCTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: CSGVLKRGRTFICLSETKREGSN*DDQLGK
Trigger: TTTGCCCAGCTGATCATCCAAGTTGCTTCCCTCTCT...CTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAGAACCCCTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 16 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000484549.6
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675803.1
ENST00000675813.1
ENST00000675962.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCGCTCTTTTCTTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: SPLSQLRSQTIKINTALFFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...GAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ATTCCACAAGAAATCCTTTTGCTCGAGTCTTCAGCATTAGGGCTTTGTGACAGAATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: IPQEILLLESSALGLCDRMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...TCTGTCACAAAGCCCTAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS-3UTR CAA 90 bp CATGACAAAGAGCACAATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: HDKEHNLFLSPLSQLRSQLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...CTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATTGTGCTCTTTGTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CCATACATATGTCATGGTCTTTCCTCTGCAGAAGTTTCTGGAAATGACCCAACTCTTGTGTGTCCACAGTaGTCCAACCAAAGCTGGTAT +
Preference number: 5 (lower is better)
Translates to: PYICHGLSSAEVSGNDPTLVCPQ*SNQSWY
Trigger: ATACCAGCTTTGGTTGGACAACTGTGGACACACAAG...AGTTGGGTCATTTCCAGAAACTTCTGCAGAGGAAAGACCATGACATATGTATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATGGAGTCCTCTTCACCTaGTGTGTCCACAGTTGTCCA +
Preference number: 5 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYGVLFT*CVHSCP
Trigger: TGGACAACTGTGGACACACAAGGTGAAGAGGACTCC...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp ATTCCGGCCAAAACCAGAATCTATAATCACAACTTCCTAATCACAGTTCAGTCAGCCATGATCCAGTTGTaGAAGGTGGCTTCAGTCCCA +
Preference number: 5 (lower is better)
Translates to: IPAKTRIYNHNFLITVQSAMIQL*KVASVP
Trigger: TGGGACTGAAGCCACCTTCAACAACTGGATCATGGC...TGACTGAACTGTGATTAGGAAGTTGTGATTATAGATTCTGGTTTTGGCCGGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACATCCGTCCACAGCATTaGAGAAGTGGCCTCTCTTTG +
Preference number: 5 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDIRPQH*RSGLSL
Trigger: CAAAGAGAGGCCACTTCTCAAATGCTGTGGACGGAT...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATGCCACTGTCACAGGGTaGGTGATTTTCACTCTCTGG +
Preference number: 5 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYATVTG*VIFTLW
Trigger: CCAGAGAGTGAAAATCACCAACCCTGTGACAGTGGC...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AAATATGCTGTAAACAACAGGGAGGAGACTAGAGCCTGTCACACCTCTGGTTTTCTTTGCGTGCTGAATTaGGGAGGATACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: KYAVNNREETRACHTSGFLCVLN*GGYFKP
Trigger: AGGCTTAAAGTATCCTCCCAAATTCAGCACGCAAAG...AAAACCAGAGGTGTGACAGGCTCTAGTCTCCTCCCTGTTGTTTACAGCATATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp ATACCTTTCTGGCTCCAGGAAATATCTAGTAAGGGGGAGCATTCAGTGAGTGTACTTTGCGTGCTGAATTaGGGAGGATACTTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: IPFWLQEISSKGEHSVSVLCVLN*GGYFKP
Trigger: AGGCTTAAAGTATCCTCCCAAATTCAGCACGCAAAG...TACACTCACTGAATGCTCCCCCTTACTAGATATTTCCTGGAGCCAGAAAGGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp TATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATGAGTCAACCCAGAGAGGGTGCTaGAGAATATACAAGAACCCT +
Preference number: 5 (lower is better)
Translates to: YSNSAVQTQSATDSVNESTQRGC*RIYKNP
Trigger: AGGGTTCTTGTATATTCTCAAGCACCCTCTCTGGGT...TGACTCATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CAA 90 bp CCTATTTTGCCCGTTTTCCAAAGGTTTGGTCAGCTTACTCCTGCTCTTCCTGTATGTGCAGCGCTTCCTTaGTCTTTTCTGTTTTGTAAC +
Preference number: 5 (lower is better)
Translates to: PILPVFQRFGQLTPALPVCAALP*SFLFCN
Trigger: GTTACAAAACAGAAAAGACAAAGGAAGCGCTGCACA...TACAGGAAGAGCAGGAGTAAGCTGACCAAACCTTTGGAAAACGGGCAAAATAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000469826.2
CDS-3UTR CAA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAGACACTCAAAAATACTaGCTGAATGATGGTCAGGTG +
Preference number: 5 (lower is better)
Translates to: FGKCPLISLQCCKTETQRDTQKY*LNDGQV
Trigger: CACCTGACCATCATTCAGCAAGTATTTTTGAGTGTC...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CAA 90 bp CCCGACTATAGCAACAGTGCTGTGCAAACACAGAGTGCAACTGATTCAGTGAATTCTTTATCCCTTCCATaGTCTAGCATAGGAGACACT +
Preference number: 5 (lower is better)
Translates to: PDYSNSAVQTQSATDSVNSLSLP*SSIGDT
Trigger: AGTGTCTCCTATGCTAGACAATGGAAGGGATAAAGA...ATTCACTGAATCAGTTGCACTCTGTGTTTGCACAGCACTGTTGCTATAGTCGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS GCA 90 bp GGAAATACAGGAACAGTACGGCCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCA +
Preference number: 5 (lower is better)
Translates to: GNTGTVRPVSSLDLI*WYLGFCGILFIRYS
Trigger: TGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGCCGTACTGTTCCTGTATTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334451.6
ENST00000675813.1
ENST00000676115.1
CDS GCA 90 bp CTGGTAAGATACACACAGGCACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCA +
Preference number: 5 (lower is better)
Translates to: LVRYTQAPVSSLDLI*WYLGFCGILFIRYS
Trigger: TGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTGCCTGTGTGTATCTTACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS-3UTR CAA 90 bp CAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGGACTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: QSWYFQLAIISVHLTWMDCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...GTCCATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACTCCCCTGCTCCTGCGTaGTTTATGAACTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINSPAPA*FMNCSG
Trigger: CCCTGAGCAGTTCATAAACAACGCAGGAGCAGGGGA...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp GAAGCAACTTGGATGATCAGCTGGGCAAAAGTTGTAACTTTTAGTCTCTTGAAATTCTTCACTGGCCCTTaGTCTAGATCCAGTTCCCCA +
Preference number: 5 (lower is better)
Translates to: EATWMISWAKVVTFSLLKFFTGP*SRSSSP
Trigger: TGGGGAACTGGATCTAGACAAAGGGCCAGTGAAGAA...TTTCAAGAGACTAAAAGTTACAACTTTTGCCCAGCTGATCATCCAAGTTGCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000492389.6
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp CTGAAAAGAGGAAGAACATTTATTTGCCTAAGTGAGACAAAGTCTTTACTTCCATCCGGAGGAGTTAGCTaGGTTCAGTCGGCTAGGATG +
Preference number: 5 (lower is better)
Translates to: LKRGRTFICLSETKSLLPSGGVS*VQSARM
Trigger: CATCCTAGCCGACTGAACCAAGCTAACTCCTCCGGA...TGGAAGTAAAGACTTTGTCTCACTTAGGCAAATAAATGTTCTTCCTCTTTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000484549.6
ENST00000674630.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
CDS-3UTR CAA 90 bp TCCATACTTTTTCAAGAGATTGAGCCTGACATTATTACAGCCCAGGGTGTTCCTCAAAGCCAGAGCATTTaGGCATTAGCAAAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: SILFQEIEPDIITAQGVPQSQSI*ALAKAE
Trigger: TTCAGCCTTTGCTAATGCCAAAATGCTCTGGCTTTG...AGGAACACCCTGGGCTGTAATAATGTCAGGCTCAATCTCTTGAAAAAGTATGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATGTGTCACTTCCAGTGTTaGATCAGAGAGGGAAGCAAC +
Preference number: 5 (lower is better)
Translates to: NQSWYFQLAIISVHLTWMCHFQC*IREGSN
Trigger: GTTGCTTCCCTCTCTGATCAAACACTGGAAGTGACA...CATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674539.1
ENST00000674630.1
ENST00000675168.1
ENST00000675596.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp AATTTTCAGTGGGCTTTTCAGAAGCTGGTTGCCATGACAAAGAGCACAATTTATATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: NFQWAFQKLVAMTKSTIYMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...ATAAATTGTGCTCTTTGTCATGGCAACCAGCTTCTGAAAAGCCCACTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCAAAAACCTCAGGGTTTaGAATGCCTCGCCCACAAAG +
Preference number: 5 (lower is better)
Translates to: RSQTIKINTALFHLISEFKNLRV*NASPTK
Trigger: CTTTGTGGGCGAGGCATTCAAAACCCTGAGGTTTTT...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CAGAGCATTTTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTAAATTTCCATCGCCTTTaGTGCAGGCAAGCGGAGGAA +
Preference number: 5 (lower is better)
Translates to: QSILALAKAELSSQAINLNFHRL*CRQAEE
Trigger: TTCCTCCGCTTGCCTGCACAAAAGGCGATGGAAATT...TAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp TTTGGAAAGTGTCCCTTAATCAGCCTGCAGTGCTGCAAAACAGAAACCCAGAGAGAAAAGCAAGTGATTTaGTGCAGCAGTAATCTAAAG +
Preference number: 5 (lower is better)
Translates to: FGKCPLISLQCCKTETQREKQVI*CSSNLK
Trigger: CTTTAGATTACTGCTGCACAAAATCACTTGCTTTTC...TCTCTGGGTTTCTGTTTTGCAGCACTGCAGGCTGATTAAGGGACACTTTCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS TCA 90 bp GGCCTAAGAAACAGTACACCAGACTTGGCACCAGATCTCCAATATTaGCTTCCTCATCCTGTATATAATCCTAGTTCTCTCTCCTTTATT +
Preference number: 5 (lower is better)
Translates to: GLRNSTPDLAPDLQY*LPHPVYNPSSLSFI
Trigger: AATAAAGGAGAGAGAACTAGGATTATATACAGGATGAGGAAGTCAATATTGGAGATCTGGTGCCAAGTCTGGTGTACTGTTTCTTAGGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000472739.6
CDS-3UTR CAA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTTATATTCCACACATTaGCGGTGTTTCCTGGGGAAA +
Preference number: 5 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYLYSTH*RCFLGK
Trigger: TTTCCCCAGGAAACACCGCAAATGTGTGGAATATAA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS GCA 90 bp GTATATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACCCC +
Preference number: 5 (lower is better)
Translates to: VYLVILLPVSSLDLI*WYLGFCGILFIRYP
Trigger: GGGGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676312.1
CDS CCA 90 bp TATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCAGGG +
Preference number: 5 (lower is better)
Translates to: YLVILLPVSSLDLIC*YLGFCGILFIRYSG
Trigger: CCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000343969.10
ENST00000477003.6
ENST00000480206.2
ENST00000498527.5
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000675935.1
ENST00000676243.1
CDS CCA 90 bp TATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTGGTGC +
Preference number: 5 (lower is better)
Translates to: YLVILLPVSSLDLIC*YLGFCGILFIRYWC
Trigger: GCACCAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541543.6
CDS CCA 90 bp TATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACCCCACA +
Preference number: 5 (lower is better)
Translates to: YLVILLPVSSLDLIC*YLGFCGILFIRYPT
Trigger: TGTGGGGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676312.1
CDS-3UTR CAA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACATGATCTGCAGGCCCTaGCTCCTCTTCCAGATAATA +
Preference number: 5 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINMICRP*LLFQII
Trigger: TATTATCTGGAAGAGGAGCAAGGGCCTGCAGATCAT...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000480206.2
ENST00000541543.6
ENST00000674630.1
ENST00000675168.1
ENST00000675649.1
ENST00000675721.1
ENST00000675813.1
ENST00000676115.1
ENST00000676243.1
ENST00000676312.1
CDS-3UTR CAA 90 bp CAGAGCATTTTGGCATTAGCAAAGGCTGAACTAAGTTCTCAGGCAATAAATTTATCTAATACTCCAAAGTaGTCTGACGATGGGAACGCA +
Preference number: 5 (lower is better)
Translates to: QSILALAKAELSSQAINLSNTPK*SDDGNA
Trigger: TGCGTTCCCATCGTCAGACAACTTTGGAGTATTAGA...TAAATTTATTGCCTGAGAACTTAGTTCAGCCTTTGCTAATGCCAAAATGCTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp GTGACTGAAGTATTTACAAAACAACACAGAGAGACCCAACAAGCTGGACCTTATTACACAGGTGAGAATTaGCTTCTGTACAGAACAAAG +
Preference number: 5 (lower is better)
Translates to: VTEVFTKQHRETQQAGPYYTGEN*LLYRTK
Trigger: CTTTGTTCTGTACAGAAGCAAATTCTCACCTGTGTA...ATAAGGTCCAGCTTGTTGGGTCTCTCTGTGTTGTTTTGTAAATACTTCAGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp CGATCACAGACCATAAAAATTAACACCGCTCTTTTCCATCTGATTTCAGAGTTCCCACAAGAAATCCTTTaGCTCGAGTCTTCAGCATTA +
Preference number: 5 (lower is better)
Translates to: RSQTIKINTALFHLISEFPQEIL*LESSAL
Trigger: TAATGCTGAAGACTCGAGCAAAAGGATTTCTTGTGG...GAACTCTGAAATCAGATGGAAAAGAGCGGTGTTAATTTTTATGGTCTGTGATCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS GCA 90 bp GTATATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTGC +
Preference number: 5 (lower is better)
Translates to: VYLVILLPVSSLDLI*WYLGFCGILFIRYC
Trigger: GCAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471201.6
CDS GCA 90 bp GTATATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTGG +
Preference number: 5 (lower is better)
Translates to: VYLVILLPVSSLDLI*WYLGFCGILFIRYW
Trigger: CCAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541543.6
CDS GCA 90 bp CGCTTGAATCTAAACTCTTTAACAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCA +
Preference number: 5 (lower is better)
Translates to: RLNLNSLTVSSLDLI*WYLGFCGILFIRYS
Trigger: TGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGTTAAAGAGTTTAGATTCAAGCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS CCA 90 bp TATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTGCCAA +
Preference number: 5 (lower is better)
Translates to: YLVILLPVSSLDLIC*YLGFCGILFIRYCQ
Trigger: TTGGCAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471201.6
CDS CCA 90 bp TTGAATCTAAACTCTTTAACAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCAGGG +
Preference number: 5 (lower is better)
Translates to: LNLNSLTVSSLDLIC*YLGFCGILFIRYSG
Trigger: CCCTGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGTTAAAGAGTTTAGATTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS-3UTR CAA 90 bp CAACCAAAGCTGGTATTTTCAACTGGCCATAATTTCTGTCCATCTAACATGGATATGTCCCTGGTTTGTTaGATTTCTAAAGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: QPKLVFSTGHNFCPSNMDMSLVC*ISKASE
Trigger: TTCCGATGCTTTAGAAATCAAACAAACCAGGGACAT...ATCCATGTTAGATGGACAGAAATTATGGCCAGTTGAAAATACCAGCTTTGGTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS GCA 90 bp GTATATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTCA +
Preference number: 5 (lower is better)
Translates to: VYLVILLPVSSLDLI*WYLGFCGILFIRYS
Trigger: TGAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000223208.10
ENST00000343969.10
ENST00000477003.6
ENST00000480206.2
ENST00000498527.5
ENST00000674539.1
ENST00000674630.1
ENST00000675596.1
ENST00000675649.1
ENST00000675935.1
ENST00000676243.1
CDS GCA 90 bp GTATATTTAGTCATACTGTTACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGATACTTA +
Preference number: 5 (lower is better)
Translates to: VYLVILLPVSSLDLI*WYLGFCGILFIRYL
Trigger: TAAGTATCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTAACAGTATGACTAAATATAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675138.1
CDS-3UTR CAA 90 bp AAATTAATGGACCTGCATGTAAGTACTCAACATGCTCACATAATTAAACTGGTGATGTCCCTGGTTTGTTaGATTTCTAAAGCATCGGAA +
Preference number: 5 (lower is better)
Translates to: KLMDLHVSTQHAHIIKLVMSLVC*ISKASE
Trigger: TTCCGATGCTTTAGAAATCAAACAAACCAGGGACAT...CACCAGTTTAATTATGTGAGCATGTTGAGTACTTACATGCAGGTCCATTAATTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000223208.10
ENST00000541543.6
ENST00000675649.1
CDS-3UTR CAA 90 bp AATTTATTCCTCAGTCCCTTATCACAGCTACGATCACAGACCATAAAAATTAACACCAGAAAATATCTGTaGTTACATGGGATTCTGAGA +
Preference number: 5 (lower is better)
Translates to: NLFLSPLSQLRSQTIKINTRKYL*LHGILR
Trigger: TCTCAGAATCCCATGTAACAACAGATATTTTCTGGT...GTTAATTTTTATGGTCTGTGATCGTAGCTGTGATAAGGGACTGAGGAATAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000480206.2
CDS TCA 72 bp GCGGCGGAAGTCGCTGGCTGCTCTTCCCTGCCCACATaGGCCTTTTCCGGTGCGCCCGCCCCCTCCGGCTCT +
Preference number: 6 (lower is better)
Translates to: AAEVAGCSSLPT*AFSGAPAPSGS
Trigger: AGAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS GCA 72 bp TGGCTGCTCTTCCCTGCCCACATGAGCCTTTTCCGGTaGGCCCGCCCCCTCCGGCTCTCCGGCCGAGACCTG +
Preference number: 6 (lower is better)
Translates to: WLLFPAHMSLFR*ARPLRLSGRDL
Trigger: CAGGTCTCGGCCGGAGAGCCGGAGGGGGCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS GCA 72 bp CCTTCCGGGCGGCGGAAGTCGCTGGCTGCTCTTCCCTaGCCACATGAGCCTTTTCCGGTGCGCCCGCCCCCT +
Preference number: 6 (lower is better)
Translates to: PSGRRKSLAALP*PHEPFPVRPPP
Trigger: AGGGGGCGGGCGCACCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCCCGGAAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS CCA 72 bp CCGGCCCCTTCCCGCCTTCCGGGCGGCGGAAGTCGCTaGCTGCTCTTCCCTGCCCACATGAGCCTTTTCCGG +
Preference number: 6 (lower is better)
Translates to: PAPSRLPGGGSR*LLFPAHMSLFR
Trigger: CCGGAAAAGGCTCATGTGGGCAGGGAAGAGCAGCCAGCGACTTCCGCCGCCCGGAAGGCGGGAAGGGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000469826.2
ENST00000484549.6
CDS GCA 72 bp TCAGGGTCGCAGAAGGGCAAGACGCCGCTCAATGGTTaGCAAGGGCAACGCGGGACGCCGGCTAGCGAGGCC +
Preference number: 6 (lower is better)
Translates to: SGSQKGKTPLNG*QGQRGTPASEA
Trigger: GGCCTCGCTAGCCGGCGTCCCGCGTTGCCCTTGGCAACCATTGAGCGGCGTCTTGCCCTTCTGCGACCCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS CAA 72 bp CCTTGTTCAGCCGCCTCCCTATACCCTCTTCTCCGATaGGCCCGTCTTCCCCGGCCGGCCAATGGGGGCCCC +
Preference number: 6 (lower is better)
Translates to: PCSAASLYPLLR*ARLPRPANGGP
Trigger: GGGGCCCCCATTGGCCGGCCGGGGAAGACGGGCCAATCGGAGAAGAGGGTATAGGGAGGCGGCTGAACAAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675596.1
ENST00000676312.1
CDS GCA 72 bp TGGGTACTTCGCTCCTCGCAGTCACAAGTACTGGCGTaGGTACGCGGGGAGAGATCGCTCCTCAAAACGGGG +
Preference number: 6 (lower is better)
Translates to: WVLRSSQSQVLA*VRGERSLLKTG
Trigger: CCCCGTTTTGAGGAGCGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCGAGGAGCGAAGTACCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000469826.2
ENST00000484549.6
ENST00000675803.1
CDS CCA 72 bp CCAGGCACCTTGGACTCTCTTCCGGAGGAGTTAGCTTaGTTCAGTCGGCCTTGCTCACCTCCGGAAAGCATG +
Preference number: 6 (lower is better)
Translates to: PGTLDSLPEELA*FSRPCSPPESM
Trigger: CATGCTTTCCGGAGGTGAGCAAGGCCGACTGAACCAAGCTAACTCCTCCGGAAGAGAGTCCAAGGTGCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000343969.10
CDS CCA 72 bp AAGGTCAGGTCCACCTGTCTGAGTTCCCGGGAACGATaGACAAGCCCATTCCTACCGTCACACCAGCAGGGA +
Preference number: 6 (lower is better)
Translates to: KVRSTCLSSRER*TSPFLPSHQQG
Trigger: TCCCTGCTGGTGTGACGGTAGGAATGGGCTTGTCCATCGTTCCCGGGAACTCAGACAGGTGGACCTGACCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS CCA 72 bp GTCTTTGGGTACTTCGCTCCTCGCAGTCACAAGTACTaGCGTGCGTACGCGGGGAGAGATCGCTCCTCAAAA +
Preference number: 6 (lower is better)
Translates to: VFGYFAPRSHKY*RAYAGRDRSSK
Trigger: TTTTGAGGAGCGATCTCTCCCCGCGTACGCACGCCAGTACTTGTGACTGCGAGGAGCGAAGTACCCAAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000469826.2
ENST00000484549.6
ENST00000675803.1
CDS CCA 72 bp GGACAAGCCCATTCCTACCGTCACACCAGCAGGGACTaGATGGTTTCCCATCATGGAAACCACACAAGCTGG +
Preference number: 6 (lower is better)
Translates to: GQAHSYRHTSRD*MVSHHGNHTSW
Trigger: CCAGCTTGTGTGGTTTCCATGATGGGAAACCATCCAGTCCCTGCTGGTGTGACGGTAGGAATGGGCTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS TCA 72 bp CTTGGTTCAGTCGGCCTTGCTCACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCACGCTCGCACATGGTGG +
Preference number: 6 (lower is better)
Translates to: LGSVGLAHLRKA*RGFQIHARTWW
Trigger: CCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTGAGCAAGGCCGACTGAACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000343969.10
CDS TCA 72 bp AAACCCCCAAGGAATAAAAGGTCAGGTCCACCTGTCTaGGTTCCCGGGAACGATGGACAAGCCCATTCCTAC +
Preference number: 6 (lower is better)
Translates to: KPPRNKRSGPPV*VPGNDGQAHSY
Trigger: GTAGGAATGGGCTTGTCCATCGTTCCCGGGAACTCAGACAGGTGGACCTGACCTTTTATTCCTTGGGGGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS TCA 72 bp CAAGCAGAGTATCACCTTGCTCACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCACGCTCGCACATGGTGG +
Preference number: 6 (lower is better)
Translates to: QAEYHLAHLRKA*RGFQIHARTWW
Trigger: CCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTGAGCAAGGTGATACTCTGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480206.2
ENST00000603513.1
CDS CCA 72 bp AAGCCCATTCCTACCGTCACACCAGCAGGGACTGGATaGTTTCCCATCATGGAAACCACACAAGCTGGTATT +
Preference number: 6 (lower is better)
Translates to: KPIPTVTPAGTG*FPIMETTQAGI
Trigger: AATACCAGCTTGTGTGGTTTCCATGATGGGAAACCATCCAGTCCCTGCTGGTGTGACGGTAGGAATGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS TCA 72 bp GGCAGGGAACCAGTAATCAGTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCTTGCTCACCTCCGGAA +
Preference number: 6 (lower is better)
Translates to: GREPVISPSGNF*AKTFRPCSPPE
Trigger: TTCCGGAGGTGAGCAAGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGGACTGATTACTGGTTCCCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676243.1
CDS CCA 72 bp CCGTCACACCAGCAGGGACTGGATGGTTTCCCATCATaGAAACCACACAAGCTGGTATTCGTTTCTTTTGCA +
Preference number: 6 (lower is better)
Translates to: PSHQQGLDGFPS*KPHKLVFVSFA
Trigger: TGCAAAAGAAACGAATACCAGCTTGTGTGGTTTCCATGATGGGAAACCATCCAGTCCCTGCTGGTGTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS TCA 72 bp GGTATCCTTTTCATCAGATACTGCCAAATGAAGACCTaGGCAACATGTAGTGTGCATGCTGGTGCCACGTGG +
Preference number: 6 (lower is better)
Translates to: GILFIRYCQMKT*ATCSVHAGATW
Trigger: CCACGTGGCACCAGCATGCACACTACATGTTGCTCAGGTCTTCATTTGGCAGTATCTGATGAAAAGGATACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000471201.6
CDS TCA 72 bp GGCAGGGAACCAGTAATCAGTCCTTCCGGGAATTTCTaGGCTAAGACTTTTAGACCTCCAACAATGTGGCAC +
Preference number: 6 (lower is better)
Translates to: GREPVISPSGNF*AKTFRPPTMWH
Trigger: GTGCCACATTGTTGGAGGTCTAAAAGTCTTAGCTCAGAAATTCCCGGAAGGACTGATTACTGGTTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675649.1
CDS TCA 72 bp CTAAGACTTTTAGACCTTGCTCACCTCCGGAAAGCATaGAGAGGTTTTCAAATCCACGCTCGCACATGGTGG +
Preference number: 6 (lower is better)
Translates to: LRLLDLAHLRKA*RGFQIHARTWW
Trigger: CCACCATGTGCGAGCGTGGATTTGAAAACCTCTTCATGCTTTCCGGAGGTGAGCAAGGTCTAAAAGTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676243.1
CDS TCA 72 bp CTGCCAGGAAGGCCTAAGCCTTCTCAAGAGAGACACTaGATACCTCTTAGAAGAGGCCCAAATATCACCAAG +
Preference number: 6 (lower is better)
Translates to: LPGRPKPSQERH*IPLRRGPNITK
Trigger: CTTGGTGATATTTGGGCCTCTTCTAAGAGGTATTCAGTGTCTCTCTTGAGAAGGCTTAGGCCTTCCTGGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675494.1
CDS CCA 72 bp ATGACACTGGATTTCCTTTCCCATTGGTCCTGGCAGTaGTTTCAGCATCAGGGTCTGAAGCTGCAGAATCAT +
Preference number: 6 (lower is better)
Translates to: MTLDFLSHWSWQ*FQHQGLKLQNH
Trigger: ATGATTCTGCAGCTTCAGACCCTGATGCTGAAACCACTGCCAGGACCAATGGGAAAGGAAATCCAGTGTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674630.1
CDS TCA 72 bp CCAGTCCCTGGGAACAGACAGCAAATGTGTACAGGGTaGGTGTTTCAGTCAAATGGTCAGCCTGTTATTTTC +
Preference number: 6 (lower is better)
Translates to: PVPGNRQQMCTG*VFQSNGQPVIF
Trigger: GAAAATAACAGGCTGACCATTTGACTGAAACACTCACCCTGTACACATTTGCTGTCTGTTCCCAGGGACTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498527.5
CDS TCA 72 bp GTGCTGATGAAGCTAAGGGAAGTTTCACATAACTCCTaGCTCCTTTCAGCCAGCATGGCTTTTTCTCTTTCC +
Preference number: 6 (lower is better)
Translates to: VLMKLREVSHNS*LLSASMAFSLS
Trigger: GGAAAGAGAAAAAGCCATGCTGGCTGAAAGGAGTCAGGAGTTATGTGAAACTTCCCTTAGCTTCATCAGCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000480206.2
ENST00000603513.1
CDS GCA 72 bp GGAACAGTACGGCCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATC +
Preference number: 6 (lower is better)
Translates to: GTVRPVSSLDLI*WYLGFCGILFI
Trigger: GATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGCCGTACTGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334451.6
ENST00000675813.1
ENST00000676115.1
CDS TCA 72 bp ATACAGGAACAGTACGGCCAGTGTCCAGTCTTGATTTaGTATGCTGGTATCTTGGGTTCTGTGGTATCCTTT +
Preference number: 6 (lower is better)
Translates to: IQEQYGQCPVLI*YAGILGSVVSF
Trigger: AAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGCCGTACTGTTCCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334451.6
ENST00000675813.1
ENST00000676115.1
CDS GCA 72 bp TACACACAGGCACCAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATC +
Preference number: 6 (lower is better)
Translates to: YTQAPVSSLDLI*WYLGFCGILFI
Trigger: GATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTGCCTGTGTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS CCA 72 bp ACAGTACGGCCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: TVRPVSSLDLIC*YLGFCGILFIR
Trigger: TCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGCCGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334451.6
ENST00000675813.1
ENST00000676115.1
CDS CCA 72 bp ACACAGGCACCAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: TQAPVSSLDLIC*YLGFCGILFIR
Trigger: TCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTGCCTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS CCA 72 bp ACAGCAAATGTGTACAGGGTGAGTGTTTCAGTCAAATaGTCAGCCTGTTATTTTCCCCACACCCTCAATTCT +
Preference number: 6 (lower is better)
Translates to: TANVYRVSVSVK*SACYFPHTLNS
Trigger: AGAATTGAGGGTGTGGGGAAAATAACAGGCTGACCATTTGACTGAAACACTCACCCTGTACACATTTGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498527.5
CDS CAA 72 bp AATACAGGAACAGTACGGCCAGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGGTTCTGTGGTATCCTT +
Preference number: 6 (lower is better)
Translates to: NTGTVRPVSSLD*ICWYLGFCGIL
Trigger: AAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGCCGTACTGTTCCTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334451.6
ENST00000675813.1
ENST00000676115.1
CDS CAA 72 bp GTAAGATACACACAGGCACCAGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGGTTCTGTGGTATCCTT +
Preference number: 6 (lower is better)
Translates to: VRYTQAPVSSLD*ICWYLGFCGIL
Trigger: AAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGGTGCCTGTGTGTATCTTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489512.5
CDS GCA 72 bp CTAAACTCTTTAACAGTGTCCAGTCTTGATTTGATATaGTGGTATCTTGGGTTCTGTGGTATCCTTTTCATC +
Preference number: 6 (lower is better)
Translates to: LNSLTVSSLDLI*WYLGFCGILFI
Trigger: GATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGTTAAAGAGTTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS CCA 72 bp AACTCTTTAACAGTGTCCAGTCTTGATTTGATATGCTaGTATCTTGGGTTCTGTGGTATCCTTTTCATCAGA +
Preference number: 6 (lower is better)
Translates to: NSLTVSSLDLIC*YLGFCGILFIR
Trigger: TCTGATGAAAAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGTTAAAGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675721.1
CDS TCA 72 bp TTCCGGACTTTACATCCTTTAGCTCTCTTATCCCTATaGCCCTGGAAAGTAAATATTACAATCCCCATTTTA +
Preference number: 6 (lower is better)
Translates to: FRTLHPLALLSL*PWKVNITIPIL
Trigger: TAAAATGGGGATTGTAATATTTACTTTCCAGGGTCATAGGGATAAGAGAGCTAAAGGATGTAAAGTCCGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000485736.5
ENST00000603513.1
CDS CAA 72 bp TTGAATCTAAACTCTTTAACAGTGTCCAGTCTTGATTaGATATGCTGGTATCTTGGGTTCTGTGGTATCCTT +
Preference number: 6 (lower is better)
Translates to: LNLNSLTVSSLD*ICWYLGFCGIL
Trigger: AAGGATACCACAGAACCCAAGATACCAGCATATCAAATCAAGACTGGACACTGTTAAAGAGTTTAGATTCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675721.1