RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP350 (Homo sapiens)

Ensembl gene IDs: ENSG00000135837

Ensembl transcript IDs: ENST00000357434.2, ENST00000367607.8, ENST00000417046.1, ENST00000418229.5, ENST00000429851.5, ENST00000437245.1, ENST00000484356.5, ENST00000490047.1, ENST00000490141.5, ENST00000491495.2, ENST00000496440.1

Found 789 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCTGCACAGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATaGTTTGCAATGTGTTTGCCAAGAAGGCTTTGCAAAGTCCAGAAG +
Preference number: 1 (lower is better)
Translates to: SAQYSTHKEAEPPRE*FAMCLPRRLCKVQK
Trigger: CTTCTGGACTTTGCAAAGCCTTCTTGGCAAACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACTGTGCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CCA 90 bp TACCCTAGTCTAAACTCAGAGGTAAGTCAGGTGTTTCTGGCCCTCTaGGACCTAGTAGGGGTGTTAGCAAAAGGTGTAGGATTACACTGT +
Preference number: 1 (lower is better)
Translates to: YPSLNSEVSQVFLAL*DLVGVLAKGVGLHC
Trigger: ACAGTGTAATCCTACACCTTTTGCTAACACCCCTACTAGGTCCCAGAGGGCCAGAAACACCTGACTTACCTCTGAGTTTAGACTAGGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR GCA 90 bp ATACTGGTAGTCTTTAAGAATAAGTACAAGGTCCAGAAGCACTCTTaGTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAG +
Preference number: 1 (lower is better)
Translates to: ILVVFKNKYKVQKHS*YDGDGCTSGGRKAQ
Trigger: CTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAAAGACTACCAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR TCA 90 bp CCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACTATTGGCTaGAAATGGCCTGATGACCAGGCTATTTACACGCACACAGTAAAC +
Preference number: 1 (lower is better)
Translates to: PLSVRCKIALDVTIG*KWPDDQAIYTHTVN
Trigger: GTTTACTGTGTGCGTGTAAATAGCCTGGTCATCAGGCCATTTTCAGCCAATAGTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CCA 90 bp TTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTaGATAGTCTCGAAAGGCAAAGGCTGTAATACCAGGTGTACCACA +
Preference number: 1 (lower is better)
Translates to: LHCATLPTENNPLIQ*IVSKGKGCNTRCTT
Trigger: TGTGGTACACCTGGTATTACAGCCTTTGCCTTTCGAGACTATCCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR TCA 90 bp CATTCAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTaGAGGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCC +
Preference number: 1 (lower is better)
Translates to: HSSNSISDFLGKDGS*RFAGQNELFPLCHA
Trigger: GGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR GCA 90 bp ATTCTTCAGATAGTAAAGACAGTTGGAGTCTGTCAGGACAGCTACTaGCACATTCTTGGCAGCATTTCTTACCAGATTGCTGATTCCATG +
Preference number: 1 (lower is better)
Translates to: ILQIVKTVGVCQDSY*HILGSISYQIADSM
Trigger: CATGGAATCAGCAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTCCAACTGTCTTTACTATCTGAAGAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR TCA 90 bp TGCATTTATCTATACCTCTCTCACTTGACTTCAGACTCAAAGAAGTaGTACCCTAGTCTAAACTCAGAGGTAAGTCAGGTGTTTCTGGCC +
Preference number: 1 (lower is better)
Translates to: CIYLYLSHLTSDSKK*YPSLNSEVSQVFLA
Trigger: GGCCAGAAACACCTGACTTACCTCTGAGTTTAGACTAGGGTATCACTTCTTTGAGTCTGAAGTCAAGTGAGAGAGGTATAGATAAATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR TCA 90 bp CTTTTCACCATTAAGTTTCTTCTCATTTTCCTTACAAGATGGAACTaGAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTCTATC +
Preference number: 1 (lower is better)
Translates to: LFTIKFLLIFLTRWN*RTFLAAATTATSSI
Trigger: GATAGAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGAAGAAACTTAATGGTGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490047.1
3UTR CCA 90 bp AGAGGCAGAGCTGATTTAAAAAGATACCAATATGGAACGAGTGGCTaGGTATCCACATCTATCTTTCTTAATCCTAAGAATAAAGCCATT +
Preference number: 1 (lower is better)
Translates to: RGRADLKRYQYGTSG*VSTSIFLNPKNKAI
Trigger: AATGGCTTTATTCTTAGGATTAAGAAAGATAGATGTGGATACCCAGCCACTCGTTCCATATTGGTATCTTTTTAAATCAGCTCTGCCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGCCACTTTGCCATGCCTaGATGCCTGAGATGGTCCTG +
Preference number: 2 (lower is better)
Translates to: ESVRTATATFLAAFLTRLPLCHA*MPEMVL
Trigger: CAGGACCATCTCAGGCATCCAGGCATGGCAAAGTGG...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CAA 90 bp CACAGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTaGCAATGTGTTTGCCAAGAAGGCTTTGCAAAGTCCAGAAGGAAA +
Preference number: 2 (lower is better)
Translates to: HSTVHTRRLNLPENA*QCVCQEGFAKSRRK
Trigger: TTTCCTTCTGGACTTTGCAAAGCCTTCTTGGCAAACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR GCA 90 bp TCATCAGGAAGAGATGGAACACTATCACTTCGTAGAGAATCATCTGCAGCAGTCGACTTTCTTGGCGGCTaGTACCACTGCTACTTCTTC +
Preference number: 2 (lower is better)
Translates to: SSGRDGTLSLRRESSAAVDFLGG*YHCYFF
Trigger: GAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTC...GACTGCTGCAGATGATTCTCTACGAAGTGATAGTGTTCCATCTCTTCCTGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
3UTR-3UTR CCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAGAACCAGCCCTGCATTaGTCCTTTGAGCCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELEPALH*SFEPSL
Trigger: AAGACTGGGCTCAAAGGACCAATGCAGGGCTGGTTC...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CAA 90 bp GTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTaGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGC +
Preference number: 2 (lower is better)
Translates to: VTASLTSWGKMGVEG*QAKMNYFHFAMPGC
Trigger: GCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR TCA 90 bp TCTCATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACGAAGCAGAATACTTCTaGTGCTTTGAGTCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: SHFPYKMELKDFLGGCYHEAEYF*CFESRV
Trigger: GACCCTTGACTCAAAGCATCAGAAGTATTCTGCTTC...GTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
3UTR-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTCCAGAAGCACTCTTaGTATGATGGCGATGGGTGT +
Preference number: 2 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFVQKHS*YDGDGC
Trigger: ACACCCATCGCCATCATAGCAAGAGTGCTTCTGGAC...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR GCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATACACTGTGCAACCCTaGCCACTGAAAATAACCCAT +
Preference number: 2 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRYTVQP*PLKITH
Trigger: ATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTCTTCTTGGGGAAAGATaGGAGTTGAAGGTTTGCAGG +
Preference number: 2 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFLLGER*ELKVCR
Trigger: CCTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAG...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR CAA 90 bp ACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTaGCCAAGAAGGCTTTGCAAAGTCCAGAAGGAAAAGCTATTAAAC +
Preference number: 2 (lower is better)
Translates to: THKEAEPPRECFAMC*PRRLCKVQKEKLLN
Trigger: GTTTAATAGCTTTTCCTTCTGGACTTTGCAAAGCCTTCTTGGCAAACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR TCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACCTTATTAACTACGTTTaGGCTCTCCCCACTTTTCCC +
Preference number: 2 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDLINYV*ALPTFP
Trigger: GGGAAAAGTGGGGAGAGCTCAAACGTAGTTAATAAG...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTACACACAAGGAGGCTaGACCTCCCAGAGAATGCTT +
Preference number: 2 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTYTQGG*TSQRML
Trigger: AAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CAA 90 bp GCATTTACATTCACGCCTAAGAGTATCCACATTCTTCTAGATTACTaGAAGAGGGACAGGACTGATGAACGGAAACCAGTCAAGAAGGCA +
Preference number: 2 (lower is better)
Translates to: AFTFTPKSIHILLDY*KRDRTDERKPVKKA
Trigger: TGCCTTCTTGACTGGTTTCCGTTCATCAGTCCTGTCCCTCTTCAAGTAATCTAGAAGAATGTGGATACTCTTAGGCGTGAATGTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGAAGCACTCTTGCTATaGTGGCGATGGGTGTACATC +
Preference number: 2 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSEALLL*WRWVYI
Trigger: GATGTACACCCATCGCCATCATAGCAAGAGTGCTTC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR TCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAGGTAGAGATTCAGAATaGGTAAGACAAGTGCAGGAG +
Preference number: 2 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELGRDSE*VRQVQE
Trigger: CTCCTGCACTTGTCTTACTCATTCTGAATCTCTACC...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR GCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCGTCCAGAAGCACTCTTaGTATGATGGCGATGGGTGT +
Preference number: 2 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVVQKHS*YDGDGC
Trigger: ACACCCATCGCCATCATAGCAAGAGTGCTTCTGGAC...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR GCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGAAATTCTTTAGATGGTaGTCAGAAAGCAAGGCTACC +
Preference number: 2 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQKFFRW*SESKAT
Trigger: GGTAGCCTTGCTTTCTGAGCACCATCTAAAGAATTT...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAGAATTATTTCCACTTTaGCATGCCTGGATGCCTGAG +
Preference number: 2 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELELFPL*HAWMPE
Trigger: CTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTC...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAAACCCATTAATCCAGTaGATAGTCTCGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRNPLIQ*IVSKGK
Trigger: TTTGCCTTTCGAGACTATCCACTGGATTAATGGGTT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGTGTTTCTGGCCCTCTaGGACCTAGTAGGGGTGTTA +
Preference number: 2 (lower is better)
Translates to: REDAEINERAHLKIIPSLVFLAL*DLVGVL
Trigger: TAACACCCCTACTAGGTCCCAGAGGGCCAGAAACAC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR CAA 90 bp CAGAAAGCAAGGCTACCACTTATTCCTGTTAGCCTGACAGTCCACTaGGTGCTGCTCAACTACAATAATGGAAGAAAATGGTCTTCAAAA +
Preference number: 2 (lower is better)
Translates to: QKARLPLIPVSLTVH*VLLNYNNGRKWSSK
Trigger: TTTTGAAGACCATTTTCTTCCATTATTGTAGTTGAGCAGCACCAAGTGGACTGTCAGGCTAACAGGAATAAGTGGTAGCCTTGCTTTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR TCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATAAACTCCAGAATGTaGAGTTGGCAGACATTATTG +
Preference number: 2 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRINSRM*SWQTLL
Trigger: CAATAATGTCTGCCAACTTCACATTCTGGAGTTTAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR TCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATGCTGCTATTGCAGGTaGTCTGGAAAAGCCCATCTT +
Preference number: 2 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLCCYCR*SGKAHL
Trigger: AAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACAACCCATTAATCCAGTaGATAGTCTCGAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDNPLIQ*IVSKGK
Trigger: TTTGCCTTTCGAGACTATCCACTGGATTAATGGGTT...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGAACCAGCCCTGCATTaGTCCTTTGAGCCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLEPALH*SFEPSL
Trigger: AAGACTGGGCTCAAAGGACCAATGCAGGGCTGGTTC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTGTATTTCCACACTACTaGTTAATAACCCCAAGAAAC +
Preference number: 2 (lower is better)
Translates to: STVHTRRLNLPENALQCVVFPHY*LITPRN
Trigger: GTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATAC...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTACTACTGCCACATTCTTaGCAGCATTTCTTACCAGAT +
Preference number: 2 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELLLPHS*QHFLPD
Trigger: ATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAG...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CAA 90 bp CTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTAGTCAATTaGCTCATTATGGCTACAAGACTACAGCTCAACATCACAAGCCCA +
Preference number: 2 (lower is better)
Translates to: LLVNNPKKPLLLLVN*LIMATRLQLNITSP
Trigger: TGGGCTTGTGATGTTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTGCTGCTATTGCAGGTaGTCTGGAAAAGCCCATCTT +
Preference number: 2 (lower is better)
Translates to: KSYESLMLCYRNSFASTHCCYCR*SGKAHL
Trigger: AAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR TCA 90 bp TCATCAGGAAGAGATGGAACACTATCACTTCGTAGAGAATCATCTGCAGCAGTCCTACTTCTTCTATCATaGTTCTTGTATCCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: SSGRDGTLSLRRESSAAVLLLLS*FLYPED
Trigger: GTCTTCAGGATACAAGAATCATGATAGAAGAAGTAG...GACTGCTGCAGATGATTCTCTACGAAGTGATAGTGTTCCATCTCTTCCTGATGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
3UTR-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGGTAAGACATCAATCTaGGCATTTCCCGAGACCCAA +
Preference number: 2 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLGKTSI*AFPETQ
Trigger: TTGGGTCTCGGGAAATGCTCAGATTGATGTCTTACC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTACACTGTGCAACCCTaGCCACTGAAAATAACCCAT +
Preference number: 2 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSYTVQP*PLKITH
Trigger: ATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTA...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGGAGAGCATCTCTTATaGTCTAATGTAGCAGCTGGA +
Preference number: 2 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSGEHLL*SNVAAG
Trigger: TCCAGCTGCTACATTAGAGCATAAGAGATGCTCTCC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAAGTTTGGAGGGAAGATaGAGAAATAAACGAACGTGC +
Preference number: 2 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLSLEGR*RNKRTC
Trigger: GCACGTTCGTTTATTTCTGCATCTTCCCTCCAAACT...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR CCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGCATCTCTGACTTCTTaGGGAAAGATGGGAGTTGAA +
Preference number: 2 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSASLTS*GKMGVE
Trigger: TTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACATATCTTTTTGTCTTTaGTGCACACACTCATTTCCT +
Preference number: 2 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDISFCL*CTHSFP
Trigger: AGGAAATGAGTGTGTGCACCAAAGACAAAAAGATAT...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR TCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGATCAGACTCAAAGAAGTaGTACCCTAGTCTAAACTCA +
Preference number: 2 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGSDSKK*YPSLNS
Trigger: TGAGTTTAGACTAGGGTATCACTTCTTTGAGTCTGA...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCTCAGACTCAAAGAAGTaGTACCCTAGTCTAAACTCA +
Preference number: 2 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSSDSKK*YPSLNS
Trigger: TGAGTTTAGACTAGGGTATCACTTCTTTGAGTCTGA...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTCAATTTGCTCATTATaGCTACAAGACTACAGCTCA +
Preference number: 2 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTSICSL*LQDYSS
Trigger: TGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CCA 90 bp CTTTTTCATCAGGAAGAGATGGAACACTATCACTTCGTAGAGAATCATCTGCAGGAACCTGTTCATCAATaGAACTCTCTATCTTTTCAC +
Preference number: 2 (lower is better)
Translates to: LFHQEEMEHYHFVENHLQEPVHQ*NSLSFH
Trigger: GTGAAAAGATAGAGAGTTCCATTGATGAACAGGTTC...CTGCAGATGATTCTCTACGAAGTGATAGTGTTCCATCTCTTCCTGATGAAAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490047.1
3UTR CAA 90 bp AGCATTTCCCGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTaGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCAAATATT +
Preference number: 2 (lower is better)
Translates to: SISRDPITTFQCFPY*SRAIIPVIVQNANI
Trigger: AATATTTGCATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCGGGAAATGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR CAA 90 bp AAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTaGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAG +
Preference number: 2 (lower is better)
Translates to: KTSISTLLVNNPKKP*LLLVNLLIMATRLQ
Trigger: CTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR CAA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGAGCCTGACAGTCCACTaGGTGCTGCTCAACTACAAT +
Preference number: 3 (lower is better)
Translates to: SAGVNQGVKEPALHWSFESLTVH*VLLNYN
Trigger: ATTGTAGTTGAGCAGCACCAAGTGGACTGTCAGGCT...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGCCCTGCATTGGTCCTTaGAGCCCAGTCTTCAGTAGG +
Preference number: 3 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQPCIGP*SPVFSR
Trigger: CCTACTGAAGACTGGGCTCAAAGGACCAATGCAGGG...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGAGCCTGACAGTCCACTaGGTGCTGCTCAACTACAAT +
Preference number: 3 (lower is better)
Translates to: ESVRTATATFLAAFLTRLSLTVH*VLLNYN
Trigger: ATTGTAGTTGAGCAGCACCAAGTGGACTGTCAGGCT...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR TCA 72 bp GTTCGGTGCAAAATTGCACTGGATGTGACTATTGGCTaGAAATGGCCTGATGACCAGGCTATTTACACGCAC +
Preference number: 3 (lower is better)
Translates to: VRCKIALDVTIG*KWPDDQAIYTH
Trigger: GTGCGTGTAAATAGCCTGGTCATCAGGCCATTTTCAGCCAATAGTCACATCCAGTGCAATTTTGCACCGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CCA 72 bp GCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTaGATAGTCTCGAAAGGCAAAGGCTGTAATACCAGG +
Preference number: 3 (lower is better)
Translates to: ATLPTENNPLIQ*IVSKGKGCNTR
Trigger: CCTGGTATTACAGCCTTTGCCTTTCGAGACTATCCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGACCAGGTGTACCACATaGTCCTATGAACTCCATACT +
Preference number: 3 (lower is better)
Translates to: VGLHCATLPTENNPLIQWTRCTT*SYELHT
Trigger: AGTATGGAGTTCATAGGACAATGTGGTACACCTGGT...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAGGGGAAAGATGGGAGTaGAAGGTTTGCAGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELGERWE*KVCRPK
Trigger: TTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCCC...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR GCA 72 bp GTCTTTAAGAATAAGTACAAGGTCCAGAAGCACTCTTaGTATGATGGCGATGGGTGTACATCAGGAGGCAGA +
Preference number: 3 (lower is better)
Translates to: VFKNKYKVQKHS*YDGDGCTSGGR
Trigger: TCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR GCA 72 bp TACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATaGTTTGCAATGTGTTTGCCAAGAAGGCTTTGCAAA +
Preference number: 3 (lower is better)
Translates to: YSTHKEAEPPRE*FAMCLPRRLCK
Trigger: TTTGCAAAGCCTTCTTGGCAAACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR GCA 72 bp ATAGTAAAGACAGTTGGAGTCTGTCAGGACAGCTACTaGCACATTCTTGGCAGCATTTCTTACCAGATTGCT +
Preference number: 3 (lower is better)
Translates to: IVKTVGVCQDSY*HILGSISYQIA
Trigger: AGCAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTCCAACTGTCTTTACTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR GCA 72 bp CCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTaGTACCACTGCTACTTCTTCTATCATGATTCTTGT +
Preference number: 3 (lower is better)
Translates to: PYKMELKDFLGG*YHCYFFYHDSC
Trigger: ACAAGAATCATGATAGAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
3UTR-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGGGGAAAGATGGGAGTaGAAGGTTTGCAGGCCAAAA +
Preference number: 3 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSGERWE*KVCRPK
Trigger: TTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCCC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR TCA 72 bp CTATACCTCTCTCACTTGACTTCAGACTCAAAGAAGTaGTACCCTAGTCTAAACTCAGAGGTAAGTCAGGTG +
Preference number: 3 (lower is better)
Translates to: LYLSHLTSDSKK*YPSLNSEVSQV
Trigger: CACCTGACTTACCTCTGAGTTTAGACTAGGGTATCACTTCTTTGAGTCTGAAGTCAAGTGAGAGAGGTATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAACCAGGTGTACCACATaGTCCTATGAACTCCATACT +
Preference number: 3 (lower is better)
Translates to: RDPITTFQCFPYLSRAIITRCTT*SYELHT
Trigger: AGTATGGAGTTCATAGGACAATGTGGTACACCTGGT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTAATATCTTTTTGTCTTaGGTGCACACACTCATTTCC +
Preference number: 3 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFNIFLS*VHTLIS
Trigger: GGAAATGAGTGTGTGCACCAAAGACAAAAAGATATT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCTCCAGAATGTGAAGTaGGCAGACATTATTGAGCTT +
Preference number: 3 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTLQNVK*ADIIEL
Trigger: AAGCTCAATAATGTCTGCCAACTTCACATTCTGGAG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCTATACCTCTCTCACTaGACTTCAGACTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: FSAFLICQELSYQSLCKMLYLSH*TSDSKK
Trigger: CTTCTTTGAGTCTGAAGTCAAGTGAGAGAGGTATAG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTCTATACCTCTCTCACTaGACTTCAGACTCAAAGAAG +
Preference number: 3 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSLYLSH*TSDSKK
Trigger: CTTCTTTGAGTCTGAAGTCAAGTGAGAGAGGTATAG...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGTGCTTTCCTTATTaGTCAAGAGCTATCATACCA +
Preference number: 3 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLQCFPY*SRAIIP
Trigger: TGGTATGATAGCTCTTGACAAATAAGGAAAGCACTG...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR TCA 72 bp GAGGGAATATTTAGGTTCTTGATTAAGAGGCAGAGCTaGTTTAAAAAGATACCAATATGGAACGAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: EGIFRFLIKRQS*FKKIPIWNEWL
Trigger: CAGCCACTCGTTCCATATTGGTATCTTTTTAAATCAGCTCTGCCTCTTAATCAAGAACCTAAATATTCCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCAGTTGGCAGACATTATaGAGCTTGCCTATTTTAGAA +
Preference number: 3 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSSWQTL*SLPILE
Trigger: TTCTAAAATAGGCAAGCTCAATAATGTCTGCCAACT...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTATGGGAGTTGAAGGTTaGCAGGCCAAAATGAATTAT +
Preference number: 3 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSMGVEG*QAKMNY
Trigger: ATAATTCATTTTGGCCTGCAAACCTTCAACTCCCAT...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR-3UTR CAA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTAATCCAGTAGATGTCTaGTATCATGCTTCTAACCAG +
Preference number: 3 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSNPVDV*YHASNQ
Trigger: CTGGTTAGAAGCATGATACAAGACATCTACTGGATT...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR CAA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACCAGTGCTTTCCTTATTaGTCAAGAGCTATCATACCA +
Preference number: 3 (lower is better)
Translates to: KSYESLMLCYRNSFASTHQCFPY*SRAIIP
Trigger: TGGTATGATAGCTCTTGACAAATAAGGAAAGCACTG...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR-3UTR CAA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTATTCTTCTAGATTACTaGAAGAGGGACAGGACTGAT +
Preference number: 3 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLILLDY*KRDRTD
Trigger: ATCAGTCCTGTCCCTCTTCAAGTAATCTAGAAGAAT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR-3UTR CAA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTATAGACAATATCTTTTaGTCTTTGGTGCACACACTC +
Preference number: 3 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLIDNIF*SLVHTL
Trigger: GAGTGTGTGCACCAAAGACAAAAAGATATTGTCTAT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTCCTGCCAATTTACCTaGGAGTGTCGCCTCCGCCCT +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSCQFT*ECRLRP
Trigger: AGGGCGGAGGCGACACTCTCAGGTAAATTGGCAGGA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCCTCGGCTACCACGGTaGATCCCGCGGAGCCTGGCG +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWPRLPR*IPRSLA
Trigger: CGCCAGGCTCCGCGGGATGCACCGTGGTAGCCGAGG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACCGTTGTTCTGCTGGCTaGCGGGTTCAGATCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHRCSAG*RVQISE
Trigger: CTCACTGATCTGAACCCGGCAGCCAGCAGAACAACG...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACACTGGCACCAAATACTaGGCTCTCCGGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHTGTKY*ALRSGT
Trigger: TGTCCCAGACCGGAGAGCCCAGTATTTGGTGCCAGT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACCCACTTTGCCATGCCTaGATGCCTGAGATGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHPLCHA*MPEMVL
Trigger: CAGGACCATCTCAGGCATCCAGGCATGGCAAAGTGG...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGAGCCTGGCGGAGGGTaGAGTGACGCCGCCCCGACC +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTEPGGG*SDAAPT
Trigger: GGTCGGGGCGGCGTCACTGCACCCTCCGCCAGGCTC...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACATAGTTCACCCACTGTaGCTCCTCCTCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHIVHPL*LLLMEL
Trigger: GAGCTCCATGAGGAGGAGGCACAGTGGGTGAACTAT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGATGGCTGATACCCTaGTTTGGCCTGTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHRWLIP*FGLCFL
Trigger: CAGGAAACACAGGCCAAACCAGGGTATCAGCCATCT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGGTGCTGCCGTTGGTaGTCATACAGTATTGCAAGG +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHRCCRW*SYSIAR
Trigger: CCTTGCAATACTGTATGACCACCAACGGCAGCACCT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTGCTGGAGATTGAAATaGGAGAAGGACTGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHCWRLK*EKDCGS
Trigger: AGACCCGCAGTCCTTCTCCCATTTCAATCTCCAGCA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGGCTTGGCTGTTGGTaGTGTTTCCAAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHRLGCW*CFQILA
Trigger: AGCCAAGATTTGGAAACATCACCAACAGCCAAGCCT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACCTCAGAACCAGACAGTaGAGCATCAACATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHLRTRQ*SINMFS
Trigger: GCTGAACATGTTGATGCTTCACTGTCTGGTTCTGAG...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGCTCACAGATTTGACGTaGTGCGTCTGTGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFELTDLT*CVCGEA
Trigger: CGCCTCACCACAGACGCAGCACGTCAAATCTGTGAG...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACGCATGTTGTCGCCGTTaGATTAATTTTTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHACCRR*INFCSR
Trigger: GCGGGAGCAAAAATTAATGCAACGGCGACAACATGC...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGTCTGGACTCCCTGGCTaGTCCTGTCCTATAGACTCG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFESGLPG*SCPIDS
Trigger: CGAGTCTATAGGACAGGAGCAGCCAGGGAGTCCAGA...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACACTGGAAGATGCACTTaGGGGACGTTCCTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHTGRCT*GTFLYF
Trigger: AAAGTACAGGAACGTCCCCCAAGTGCATCTTCCAGT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGCTGTCGTTGTTCTGCTaGCTGCCGGGTTCAGATCAG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFELSLFC*LPGSDQ
Trigger: CTGATCTGAACCCGGCAGCCAGCAGAACAACGACAG...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAACTGGATGGTCAATATaGCCCAGCTTCTGGCCCCGG +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRTGWSI*PSFWPR
Trigger: CCGGGGCCAGAAGCTGGGTCATATTGACCATCCAGT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGTCTGCTGCCATACGATaGTGGAGGCCAGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLSAAIR*WRPAGE
Trigger: TTCTCCTGCTGGCCTCCATCATCGTATGGCAGCAGA...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTGTGCTGCGTCTGTGGTaGGGCGAGCAGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LQDGTEGLSWRLLPLLLLVLRLW*GEQFLT
Trigger: AGTCAGAAACTGCTCGCCTCACCACAGACGCAGCAC...AAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATCTGGACTCCCTGGCTaGTCCTGTCCTATAGACTCG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSGLPG*SCPIDS
Trigger: CGAGTCTATAGGACAGGAGCAGCCAGGGAGTCCAGA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAATCTCTACTTCTTCTaGAGTATGGGGGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHNLYFF*SMGDCQ
Trigger: TTGGCAGTCCCCCATACTGCAGAAGAAGTAGAGATT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGTAGCCCTTCTGGTTTaGGACCAGGGGATCTCACTC +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLVALLV*DQGISL
Trigger: GAGTGAGATCCCCTGGTCCCAAACCAGAAGGGCTAC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGGGTCTCCAAGTCAGTTaGACCAGGACTGGTTGCCTT +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEGLQVS*TRTGCL
Trigger: AAGGCAACCAGTCCTGGTCCAACTGACTTGGAGACC...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAACTGGCACCAAATACTaGGCTCTCCGGTCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVTGTKY*ALRSGT
Trigger: TGTCCCAGACCGGAGAGCCCAGTATTTGGTGCCAGT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGCCAGATGGCTGGAACTaGAATTGGAAGGTGCACCAT +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEPDGWN*NWKVHH
Trigger: ATGGTGCACCTTCCAATTTCAGTTCCAGCCATCTGG...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGTCTGCAGTAGGAACTaGAGCCAAGGAAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLVCSRN*SQGRGF
Trigger: GAATCCCCTTCCTTGGCTTCAGTTCCTACTGCAGAC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGACTGAAGACTGCTGGTaGACATGGGCTTCAAGTACC +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFETEDCW*TWASST
Trigger: GGTACTTGAAGCCCATGTTCACCAGCAGTCTTCAGT...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCGAGCTGCGGCTCCCTaGAGTTCTCTCTGGCGCAGG +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTRAAAP*SSLWRR
Trigger: CCTGCGCCAGAGAGAACTGCAGGGAGCCGCAGCTCG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TCTCATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACCTCACAGATTTGACGTaGTGCGTCTGTGGTGAGGCG +
Preference number: 4 (lower is better)
Translates to: SHFPYKMELKDFLGGCYHLTDLT*CVCGEA
Trigger: CGCCTCACCACAGACGCAGCACGTCAAATCTGTGAG...GTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGATAGTTCACCCACTGTaGCTCCTCCTCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLIVHPL*LLLMEL
Trigger: GAGCTCCATGAGGAGGAGGCACAGTGGGTGAACTAT...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGTTTGGAGGGAAGATaGAGAAATAAACGAACGTGC +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSLEGR*RNKRTC
Trigger: GCACGTTCGTTTATTTCTGCATCTTCCCTCCAAACT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGGCTCCTCATTGGCTGTaGCTTATCTCTGCAAGACTG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEAPHWL*LISARL
Trigger: CAGTCTTGCAGAGATAAGCCACAGCCAATGAGGAGC...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTCGAATCTTGGTCTCTaGAGGGTTGAAACCTTTATA +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSNLGL*RVETFI
Trigger: TATAAAGGTTTCAACCCTTCAGAGACCAAGATTCGA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAAGGCCCTTCACTGACTaGATCTATGCTGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVRPFTD*IYAGTK
Trigger: CTTGGTTCCAGCATAGATTCAGTCAGTGAAGGGCCT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTCTGAACATTTCCAGTaGATGAATCCAACCATTCTG +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSEHFQ*MNPTIL
Trigger: CAGAATGGTTGGATTCATTCACTGGAAATGTTCAGA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGACACACTCTCCTGCTaGGCAAGTGAAATGCCTCTA +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVDTLSC*ASEMPL
Trigger: TAGAGGCATTTCACTTGCTCAGCAGGAGAGTGTGTC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGAGGCGAGCAGTTTCTaGCTGCTGAGCTGCTATTTT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVEASSF*LLSCYF
Trigger: AAAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGACTGAAGACTGCTGGTaGACATGGGCTTCAAGTACC +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLTEDCW*TWASST
Trigger: GGTACTTGAAGCCCATGTTCACCAGCAGTCTTCAGT...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTCAGACTCAAAGAAGTaGTACCCTAGTCTAAACTCA +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSDSKK*YPSLNS
Trigger: TGAGTTTAGACTAGGGTATCACTTCTTTGAGTCTGA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTAAGAAGGCAGGGTACTaGGGTCCCAGGAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFKKAGY*GPRRAS
Trigger: AGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTGCTGGAGCAGGTGGTaGTGTTGCCACTTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQCWSRW*CCHFSD
Trigger: GTCAGAAAAGTGGCAACAGCACCACCTGCTCCAGCA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTCCTGGGATCAGATTCTaGTCTTCCAATGTGACCCCC +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVPGIRF*SSNVTP
Trigger: GGGGGTCACATTGGAAGAGCAGAATCTGATCCCAGG...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTCTCATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCAACAGATTTGACGTGCTaGGTCTGTGGTGAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: FSFSLQDGTEGLSWRLLPTDLTC*VCGEAS
Trigger: GCTCGCCTCACCACAGACGCAGCACGTCAAATCTGT...TGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGCCTTTGCTAGACTCCTaGTTTGACACAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEPLLDS*FDTDVQ
Trigger: CTGCACATCTGTGTCAAAGCAGGAGTCTAGCAAAGG...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAGATCCGCCGGTCCGCTaGGAAGGAAGACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIDPPVR*EGRQGG
Trigger: TCCGCCTTGTCTTCCTTCCCAGCGGACCGGCGGATC...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGGTGTTTCTGGCCCTCTaGGACCTAGTAGGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQVFLAL*DLVGVL
Trigger: TAACACCCCTACTAGGTCCCAGAGGGCCAGAAACAC...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR CAA 72 bp GTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTaGCAATGTGTTTGCCAAGAAGGCTTTGCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: VHTRRLNLPENA*QCVCQEGFAKS
Trigger: GGACTTTGCAAAGCCTTCTTGGCAAACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATCTGCTCTTCCAATGTaGCCCCCAGATTTAGCAGTT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSALPM*PPDLAV
Trigger: AACTGCTAAATCTGGGGGTCACATTGGAAGAGCAGA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACCAAGGTCCATCTTCTTaGGGTGCCTGCTGCACATCA +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDQGPSS*GACCTS
Trigger: TGATGTGCAGCAGGCACCTCAAGAAGATGGACCTTG...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTGAAGAGGCCCTTCACTaGCTGAATCTATGCTGGAAC +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVEEALH*LNLCWN
Trigger: GTTCCAGCATAGATTCAGTCAGTGAAGGGCCTCTTC...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAGATTCTGCATGGACCTaGGCTGCTTTGTTTCGGGTT +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRDSAWT*AALFRV
Trigger: AACCCGAAACAAAGCAGCTCAGGTCCATGCAGAATC...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTCTATCATGAGGCGAGCAGTTTCTaGCTGCTGAGCTGCTATTTT +
Preference number: 4 (lower is better)
Translates to: MELKDFLGGCYHCYFFYHEASSF*LLSCYF
Trigger: AAAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTC...ATGATAGAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACAGGAGTGAAGACTGGTaGGCTGCCCTCATTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDRSEDW*AALISS
Trigger: GGAAGAAATGAGGGCAGCTCACCAGTCTTCACTCCT...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTACGGAGACGCAGGAGTaGAGACTGGTGAGCTGCCCT +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHITETQE*RLVSCP
Trigger: AGGGCAGCTCACCAGTCTTCACTCCTGCGTCTCCGT...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACGCTTGTTTTTCCATTTaGCGAATTTCTGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHACFSI*RISASS
Trigger: AGAAGAAGCAGAAATTCGTCAAATGGAAAAACAAGC...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTCAGTAAGTATACTGTaGTCTGGACTCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQSVSIL*SGLPGC
Trigger: GCAGCCAGGGAGTCCAGATCACAGTATACTTACTGA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGCTAGACTCCTGCTTTaGCACAGATGTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLARLLL*HRCAAF
Trigger: AAAAGCTGCACATCTGTGTCAAAGCAGGAGTCTAGC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTGTCCTCCAGTCCTATaGCTTCCTTTGCTAGACTCC +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWCPPVL*LPLLDS
Trigger: GGAGTCTAGCAAAGGAAGTCATAGGACTGGAGGACA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAATGACTCTAACTGCTTaGTCAGACTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVMTLTA*SDWLLG
Trigger: CCCAAGAAGCCAGTCTGATCAAGCAGTTAGAGTCAT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTTATTCCTGTTAGCCTaGCAGTCCACTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQLFLLA*QSTWCC
Trigger: GCAGCACCAAGTGGACTGTCAGGCTAACAGGAATAA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATGCTGCTATTGCAGGTaGTCTGGAAAAGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVCCYCR*SGKAHL
Trigger: AAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGCATCAAGTCTTTTCTTaGAAGAGGCTGTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEHQVFS*KRLWRF
Trigger: GAACCTCCACAGCCTCTTGCAAGAAAAGACTTGATG...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACTCTCTGTCGTTGTTCTaGTGGCTGCCGGGTTCAGAT +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDSLSLF*WLPGSD
Trigger: ATCTGAACCCGGCAGCCAGCAGAACAACGACAGAGA...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCACAGATTTGACGTGCTaGGTCTGTGGTGAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFTDLTC*VCGEAS
Trigger: GCTCGCCTCACCACAGACGCAGCACGTCAAATCTGT...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGGAATTATTTCCACTTTaGCATGCCTGGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEELFPL*HAWMPE
Trigger: CTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTC...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCTTTTGGCTCCATTCTaGGAGCAGGTCCCAGAATCT +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWLLAPF*EQVPES
Trigger: AGATTCTGGGACCTGCTCCCAGAATGGAGCCAAAAG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGGAGACATGTCACTACTaGAAGATGCACTTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQETCHY*KMHLGD
Trigger: GTCCCCCAAGTGCATCTTCCAGTAGTGACATGTCTC...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTATGTGCCCAAAAAGTaGCAAGAATTTTTCAGCTTC +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHYVPKK*QEFFSF
Trigger: GAAGCTGAAAAATTCTTGCCACTTTTTGGGCACATA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGTGTTTCTGGCCCTCTaGGACCTAGTAGGGGTGTTA +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPVFLAL*DLVGVL
Trigger: TAACACCCCTACTAGGTCCCAGAGGGCCAGAAACAC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTGAACCAGCCCTGCATTaGTCCTTTGAGCCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFEPALH*SFEPSL
Trigger: AAGACTGGGCTCAAAGGACCAATGCAGGGCTGGTTC...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGGCATCTCTGACTTCTTaGGGAAAGATGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEASLTS*GKMGVE
Trigger: TTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGC...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCTTTTTACTGGGCTGTaGCTCCTAGGAGCATGTACT +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWLFTGL*LLGACT
Trigger: AGTACATGCTCCTAGGAGTCACAGCCCAGTAAAAAG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTGGCGTTCAGATAACTaGGTTCTGCTGCCATACGAT +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWWRSDN*VLLPYD
Trigger: ATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCACTTCCCGTTGTGATTaGACCACCTGCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: HFPYKMELKDFLGGCYHCTSRCD*TTCCND
Trigger: ATCATTACAGCAGGTGGTTCAATCACAACGGGAAGT...GCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAGTGCTGCGTCTGTGGTaGGGCGAGCAGTTTCTGACT +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGVLRLW*GEQFLT
Trigger: AGTCAGAAACTGCTCGCCTCACCACAGACGCAGCAC...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTCTTACAAGATGGAACTaGAGGACTTTCTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LQDGTEGLSWRLLPLLLLLTRWN*RTFLAA
Trigger: AGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAG...AAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGCTTTCACTGTTTAGATaGGAGTACAGAGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFELSLFR*EYRGTG
Trigger: TCCAGTACCTCTGTACTCTCATCTAAACAGTGAAAG...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGACTTGATAGGCAGGTaGCATTGTCCTCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPDLIGR*HCPPVL
Trigger: TAGGACTGGAGGACAATGTCACCTGCCTATCAAGTC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGTTATCTCTGCAAGACTaGGAGTCTTTCCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLLSLQD*ESFLSD
Trigger: GTCACTCAGGAAAGACTCTCAGTCTTGCAGAGATAA...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTGAAGCACTCTTGCTATaGTGGCGATGGGTGTACATC +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFEALLL*WRWVYI
Trigger: GATGTACACCCATCGCCATCATAGCAAGAGTGCTTC...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGGTAGAGATTCAGAATaGGTAAGACAAGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLGRDSE*VRQVQE
Trigger: CTCCTGCACTTGTCTTACTCATTCTGAATCTCTACC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACTACACACAAGGAGGCTaGACCTCCCAGAGAATGCTT +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDYTQGG*TSQRML
Trigger: AAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTA...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TCATCAGGAAGAGATGGAACACTATCACTTCGTAGAGAATCATCTGCAGCAGTCTTTTCCTCACAGATTTaGCGTGCTGCGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SSGRDGTLSLRRESSAAVFSSQI*RAASVV
Trigger: CACCACAGACGCAGCACGTCAAATCTGTGAGGAAAA...GACTGCTGCAGATGATTCTCTACGAAGTGATAGTGTTCCATCTCTTCCTGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATGTGGACTTCCCTTTaGCAATTCTTCCCATGGTCC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRMWTSL*QFFPWS
Trigger: GGACCATGGGAAGAATTGGCAAAGGGAAGTCCACAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTTACACGTTGCTTCCTaGAGGACTTCAGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: HFPYKMELKDFLGGCYHCLHVAS*RTSVTS
Trigger: GGAAGTAACTGAAGTCCTGCAGGAAGCAACGTGTAA...GCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp TTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTGGCGGCTGCTACCACTaGTACTTCTTCTATCATGAT +
Preference number: 4 (lower is better)
Translates to: LQDGTEGLSWRLLPLLLLGGCYH*YFFYHD
Trigger: ATCATGATAGAAGAAGTAGCAGTGGTAGCAGCCGCC...AAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp AAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTCTATCATGATTCTTGTGACTTTCTTGGCGGCTaGTACCACTGCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: KDFLGGCYHCYFFYHDSCDFLGG*YHCYFF
Trigger: GAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTC...ACAAGAATCATGATAGAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGCATGCTCCACATCACTaGGCTCCTTACTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLHAPHH*APYFSS
Trigger: TGATGAAAAGTAAGGAGCGCAGTGATGTGGAGCATG...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGTAACTTGCTGTTCATaGTCCACATCACTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPVTCCS*STSLRS
Trigger: GGAGCGCAGTGATGTGGAGCATGAACAGCAAGTTAC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATCCCGTCGGCTAGCTaGATTTTCACACACAACTCA +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRIPSAS*IFTHNS
Trigger: TGAGTTGTGTGTGAAAATGCAGCTAGCCGACGGGAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGAATTATTTCCACTTTaGCATGCCTGGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVELFPL*HAWMPE
Trigger: CTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGGAGAGCATCTCTTATaGTCTAATGTAGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVGEHLL*SNVAAG
Trigger: TCCAGCTGCTACATTAGAGCATAAGAGATGCTCTCC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAGAGGAGTTGCGGTaGCATTCAAAGGCCGTGATG +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPLEELR*HSKAVM
Trigger: CATCACGGCCTTTGAATGCCACCGCAACTCCTCTAA...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CATCAGGAAGAGATGGAACACTATCACTTCGTAGAGAATCATCTGCAGCAGTCTACTGAAGGACTTTCTTaGCGGCTGCTACCACTGCTA +
Preference number: 4 (lower is better)
Translates to: HQEEMEHYHFVENHLQQSTEGLS*RLLPLL
Trigger: TAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGT...AGACTGCTGCAGATGATTCTCTACGAAGTGATAGTGTTCCATCTCTTCCTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR CCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAAAGTATACTGTGATCTaGACTCCCTGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPKYTVI*TPWLLL
Trigger: CAGGAGCAGCCAGGGAGTCCAGATCACAGTATACTT...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCTGGGCTCTCCGGTCTaGGACACATATCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTLGSPV*DTYLER
Trigger: CCTCTCCAGATATGTGTCCCAGACCGGAGAGCCCAG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGAGAGTTGATTCTACATaGCTTCATCCAGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFERVDST*LHPDRL
Trigger: CAACCTGTCTGGATGAAGCCATGTAGAATCAACTCT...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACTTCATCAAGGTTATTTaGATTTTTCACTCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHFIKVI*IFHSSE
Trigger: TTCCGACGAGTGAAAAATCCAAATAACCTTGATGAA...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCCAGGGTGGTGGCCCTaGGAGGACTACGAGATTTCT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMPGWWP*EDYEIS
Trigger: AGAAATCTCGTAGTCCTCTCAGGGCCACCACCCTGG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTCTCACTCTAAAGCTTaGTATGGCACTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQSHSKA*YGTLWS
Trigger: AGACCACAGAGTGCCATATCAAGCTTTAGAGTGAGA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTACCAGATTTCTTTCCTTaGTGGGAGCCACGTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELPDFFP*WEPRSA
Trigger: AGCAGAACGTGGCTCCCATCAAGGAAAGAAATCTGG...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTGCAGTTTCTGACTGCTaGGCTGCTATTTTACACGTT +
Preference number: 4 (lower is better)
Translates to: LQDGTEGLSWRLLPLLLLAVSDC*AAILHV
Trigger: AACGTGTAAAATAGCAGCTCAGCAGTCAGAAACTGC...AAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGCCATCTCACAGATTTaGCGTGCTGCGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSAISQI*RAASVV
Trigger: CACCACAGACGCAGCACGTCAAATCTGTGAGATGGC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGTCCCTTCTTTACTCTaGGAGAGTGAAACAGATGGA +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWVPSLL*ESETDG
Trigger: TCCATCTGTTTCACTCTCTCAGAGTAAAGAAGGGAC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TCTCATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACGTCCCTTCTTTACTCTaGGAGAGTGAAACAGATGGA +
Preference number: 4 (lower is better)
Translates to: SHFPYKMELKDFLGGCYHVPSLL*ESETDG
Trigger: TCCATCTGTTTCACTCTCTCAGAGTAAAGAAGGGAC...GTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAATACTTCTGATGCTTTaGGTCAAGGGTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVILLML*VKGPFF
Trigger: AAAGAAGGGACCCTTGACTCAAAGCATCAGAAGTAT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTACTGAGAGTCTTTCCTaGGTGACAGCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVTESLS*VTAKMT
Trigger: TGTCATCTTTGCTGTCACTCAGGAAAGACTCTCAGT...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTTCATCAAACCAGTCTTaGTCATCTCCTAACGCGCTC +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFSSNQS*SSPNAL
Trigger: GAGCGCGTTAGGAGATGATCAAGACTGGTTTGATGA...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGGAATACTGATGCTATaGAGATCGTGGCCTAATTCT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVGILML*RSWPNS
Trigger: AGAATTAGGCCACGATCTTCATAGCATCAGTATTCC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAAAGAAGGCAGGGTACTaGGGTCCCAGGAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIKKAGY*GPRRAS
Trigger: AGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAAGAAGGCAGGGTACTaGGGTCCCAGGAGAGCATCT +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVKKAGY*GPRRAS
Trigger: AGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGGTAAGACATCAATCTaGGCATTTCCCGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPGKTSI*AFPETQ
Trigger: TTGGGTCTCGGGAAATGCTCAGATTGATGTCTTACC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGACTTATTAACTACGTTTaGGCTCTCCCCACTTTTCCC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRLINYV*ALPTFP
Trigger: GGGAAAAGTGGGGAGAGCTCAAACGTAGTTAATAAG...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTACTTCACTTTCAATTCTaGTGGACAAAGAAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVLHFQF*WTKKQL
Trigger: CAGCTGCTTCTTTGTCCAGCAGAATTGAAAGTGAAG...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTATGGGCTCCTGATGAATaGTGGGAGGTAACATCCACA +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELWAPDE*WEVTST
Trigger: TGTGGATGTTACCTCCCAGCATTCATCAGGAGCCCA...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCAGATAACTGAGTTCTaGTGCCATACGATGATGGAG +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWQITEF*CHTMME
Trigger: CTCCATCATCGTATGGCAGCAGAACTCAGTTATCTG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAAAGTCTGGAAGGTGCTaGCGTTGGTGGTCATACAGT +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELKSGRC*RWWSYS
Trigger: ACTGTATGACCACCAACGGCAGCACCTTCCAGACTT...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTCTTTCCTTCCGAGCTaGCTTATTGGCTTCTTGAAG +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQSFLPS*LIGFLK
Trigger: CTTCAAGAAGCCAATAAGGCAGCTCGGAAGGAAAGA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGCATGTTGTCGCCGTTaGATTAATTTTTGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPACCRR*INFCSR
Trigger: GCGGGAGCAAAAATTAATGCAACGGCGACAACATGC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCACCTTTGCTAGACTCCTaGTTTGACACAGATGTGCAG +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPPLLDS*FDTDVQ
Trigger: CTGCACATCTGTGTCAAAGCAGGAGTCTAGCAAAGG...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAAGTTTGGAGGGAAGATaGAGAAATAAACGAACGTGC +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSLEGR*RNKRTC
Trigger: GCACGTTCGTTTATTTCTGCATCTTCCCTCCAAACT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAGTAAAACGTCCAACCTaGGATCAGATTCTGCTCTTC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRVKRPT*DQILLF
Trigger: GAAGAGCAGAATCTGATCCCAGGTTGGACGTTTTAC...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTAGGTTTTCTTTTTACTaGGCTGTGACTCCTAGGAGC +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVRFSFY*AVTPRS
Trigger: GCTCCTAGGAGTCACAGCCCAGTAAAAAGAAAACCT...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTTCCAGCAAAAGGCTGTaGTTGAGAATGGTGAACTTG +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVSSKRL*LRMVNL
Trigger: CAAGTTCACCATTCTCAACCACAGCCTTTTGCTGGA...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTACACTTTCAATTCTGCTaGACAAAGAAGCAGCTGTTG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVHFQFC*TKKQLL
Trigger: CAACAGCTGCTTCTTTGTCCAGCAGAATTGAAAGTG...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGATCATCTTTCACAGGTaGAGTTACAGCCTTGGTCCA +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWIIFHR*SYSLGP
Trigger: TGGACCAAGGCTGTAACTCCACCTGTGAAAGATGAT...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAGGGGCTGTCCATCCTaGTCTCCCTCTTCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVRGCPS*SPSSSE
Trigger: CTCTGAAGAAGAGGGAGACCAGGATGGACAGCCCCT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAGACGATGCAGCAGACTaGGCTCCTGATGAATGCTGG +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGDDAAD*APDECW
Trigger: CCAGCATTCATCAGGAGCCCAGTCTGCTGCATCGTC...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGCTTAGAACCTGGTATTaGAGCCATGTTCTCTGTCGT +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQLRTWY*SHVLCR
Trigger: ACGACAGAGAACATGGCTCCAATACCAGGTTCTAAG...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCCTGTTTCACAAAGTCTaGAAGGTGCTGCCGTTGGTG +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFLFHKV*KVLPLV
Trigger: CACCAACGGCAGCACCTTCCAGACTTTGTGAAACAG...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACTGTAGAGCTCCTCATTaGCTGTGGCTTATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDCRAPH*LWLISA
Trigger: TGCAGAGATAAGCCACAGCCAATGAGGAGCTCTACA...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATGTTCCTCAACATTTTaGGATAGGTCTTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVCSSTF*DRSWGV
Trigger: AACACCCCAAGACCTATCCCAAAATGTTGAGGAACA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTCTGGGCTCTCCGGTCTaGGACACATATCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSLGSPV*DTYLER
Trigger: CCTCTCCAGATATGTGTCCCAGACCGGAGAGCCCAG...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAAGAGTTGATTCTACATaGCTTCATCCAGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVRVDST*LHPDRL
Trigger: CAACCTGTCTGGATGAAGCCATGTAGAATCAACTCT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGATAGTAAAGACAGTTaGAGTCTGTCAGGACAGCTA +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLDSKDS*SLSGQL
Trigger: TAGCTGTCCTGACAGACTCCAACTGTCTTTACTATC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGATCATTGATGACAGATaGTTGGGAGCTCTCAAAATC +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLIIDDR*LGALKI
Trigger: GATTTTGAGAGCTCCCAATCATCTGTCATCAATGAT...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATCTTGCTTTGCAGTGTaGGCTGTAGAATCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVSCFAV*AVESSC
Trigger: ACAGCTGGATTCTACAGCTCACACTGCAAAGCAAGA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTATGTATAAGCAGCTGGTaGGGTCACATATGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELCISSW*GHIWLR
Trigger: CCTCAACCATATGTGACCTCACCAGCTGCTTATACA...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTAACTCTTTCTACATCTaGCAGTTGGCGCACCGACTC +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTNSFYI*QLAHRL
Trigger: GAGTCGGTGCGCCAACTGTCAGATGTAGAAAGAGTT...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTCTCATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCAGAAGCAGAATACTTCTaGTGCTTTGAGTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: FSFSLQDGTEGLSWRLLPEAEYF*CFESRV
Trigger: GACCCTTGACTCAAAGCATCAGAAGTATTCTGCTTC...TGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCACATCCTTCAGAGCTCTaGTCCTACCTTCAATATCAC +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPHPSEL*SYLQYH
Trigger: GTGATATTGAAGGTAGGATCAGAGCTCTGAAGGATG...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATCCAACCTTGCCATCTaGCATATCAAGAATTCTACT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSNLAI*HIKNST
Trigger: AGTAGAATTCTTGATATGTCAGATGGCAAGGTTGGA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAACTGAGAGTCTTTCCTaGGTGACAGCAAAGATGACA +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPTESLS*VTAKMT
Trigger: TGTCATCTTTGCTGTCACTCAGGAAAGACTCTCAGT...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGTCTGCAGTAGGAACTaGAGCCAAGGAAGGGGATTC +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIVCSRN*SQGRGF
Trigger: GAATCCCCTTCCTTGGCTTCAGTTCCTACTGCAGAC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTACTGATATCGTTCATCTaGGTAACAGTCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVLISFI*VTVFIF
Trigger: GAAGATGAAGACTGTTACTCAGATGAACGATATCAG...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTTCAGGAACTCCCGGCTaGGTTCAAGTTCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHISGTPG*VQVQQV
Trigger: GACTTGCTGAACTTGAACTCAGCCGGGAGTTCCTGA...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATCATCAAACCAGTCTTaGTCATCTCCTAACGCGCTC +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVSSNQS*SSPNAL
Trigger: GAGCGCGTTAGGAGATGATCAAGACTGGTTTGATGA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATCCCCTGCTTTTCACTaGTCTGATTCAGAACATCAA +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRSPAFH*SDSEHQ
Trigger: TTGATGTTCTGAATCAGATCAGTGAAAAGCAGGGGA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTTATTCCTGTTAGCCTaGCAGTCCACTTGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTLFLLA*QSTWCC
Trigger: GCAGCACCAAGTGGACTGTCAGGCTAACAGGAATAA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCCTGCATTGGTCCTTTaGGCCCAGTCTTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMPALVL*AQSSVG
Trigger: CCCTACTGAAGACTGGGCTCAAAGGACCAATGCAGG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCTGCTGCTATTGCAGGTaGTCTGGAAAAGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFCCYCR*SGKAHL
Trigger: AAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCA...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAATCGTAAGGACAACGTaGTCCTACAAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPIVRTT*SYKQPK
Trigger: CTTTGGCTGTTTGTAGGATCACGTTGTCCTTACGAT...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGCTTGAACAGTATCCTTaGTTTGAGAGTTCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLLEQYP*FESSLD
Trigger: ATCCAAGGAACTCTCAAAGCAAGGATACTGTTCAAG...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTCTACACAGTATACGTaGTTTGATTCCAGATGGCTG +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWSTQYT*FDSRWL
Trigger: CAGCCATCTGGAATCAAAGCACGTATACTGTGTAGA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGCTTTGACACAGATGTaGAGCTTTTGGGAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWALTQM*SFWEVN
Trigger: ATTCACTTCCCAAAAGCTGCACATCTGTGTCAAAGC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTAATCTCTACTTCTTCTaGAGTATGGGGGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFNLYFF*SMGDCQ
Trigger: TTGGCAGTCCCCCATACTGCAGAAGAAGTAGAGATT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTTACACTGTGCAACCCTaGCCACTGAAAATAACCCAT +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFYTVQP*PLKITH
Trigger: ATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTA...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGCAGTCCACTTGGTGCTaGTCAACTACAATAATGGAA +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQQSTWC*STTIME
Trigger: TTCCATTATTGTAGTTGAGCAGCACCAAGTGGACTG...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTCCGAGCTGCCTTATTaGCTTCTTGAAGACGTTTTA +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWSELPY*LLEDVL
Trigger: TAAAACGTCTTCAAGAAGCCAATAAGGCAGCTCGGA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTCCTATAGACTCGGATaGTACATATTCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQSYRLG*YIFNSR
Trigger: CCTGCTGTTGAATATGTACCATCCGAGTCTATAGGA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGTGATCTGGACTCCCTaGCTGCTCCTGTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIVIWTP*LLLSYR
Trigger: TCTATAGGACAGGAGCAGCCAGGGAGTCCAGATCAC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGACCCTATCACCAATGTaGAAATCAAATAACTCGTCT +
Preference number: 4 (lower is better)
Translates to: SAGVNQGVKEPALHWSFETLSPM*KSNNSS
Trigger: AGACGAGTTATTTGATTTCCACATTGGTGATAGGGT...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGGTGTTACTTTCTTTTaGTCATCACCAAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWGVTFF*SSPRSS
Trigger: GGAGCTTCTTGGTGATGACCAAAAGAAAGTAACACC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGGGTGTTACTTTCTTTTaGTCATCACCAAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQGVTFF*SSPRSS
Trigger: GGAGCTTCTTGGTGATGACCAAAAGAAAGTAACACC...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTGGGCTCTCCGGTCTaGGACACATATCTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLLGSPV*DTYLER
Trigger: CCTCTCCAGATATGTGTCCCAGACCGGAGAGCCCAG...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGTTCTTCCTGCCCACTaGCACCAAATACTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIVLPAH*HQILGS
Trigger: AGAGCCCAGTATTTGGTGCCAGTGGGCAGGAAGAAC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCGTTCTTCCTGCCCACTaGCACCAAATACTGGGCTCT +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVVLPAH*HQILGS
Trigger: AGAGCCCAGTATTTGGTGCCAGTGGGCAGGAAGAAC...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGACTTCTTCTGCAGTATaGGGGACTGCCAATAATGTT +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQTSSAV*GTANNV
Trigger: AACATTATTGGCAGTCCCCCATACTGCAGAAGAAGT...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTACTTCTTGGGGAAAGATaGGAGTTGAAGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVLLGER*ELKVCR
Trigger: CCTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAG...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCTATTGCAGGTGATCTaGAAAAGCCCATCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWLLQVI*KSPSSF
Trigger: AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR CAA 72 bp AGGCTACCACTTATTCCTGTTAGCCTGACAGTCCACTaGGTGCTGCTCAACTACAATAATGGAAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: RLPLIPVSLTVH*VLLNYNNGRKW
Trigger: CCATTTTCTTCCATTATTGTAGTTGAGCAGCACCAAGTGGACTGTCAGGCTAACAGGAATAAGTGGTAGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
3UTR CAA 72 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTaGTTTAACCCAGAGTTAACTACCCTGGATAGCACA +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLY*FNPELTTLDST
Trigger: TGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAAGAGCAGCCTTGGTTTaGGAAAGTGCATCCCACGAT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIRAALV*ESASHD
Trigger: ATCGTGGGATGCACTTTCTCAAACCAAGGCTGCTCT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAAGGCTGTGGAGGTTCTaGGAGAGACATGTCACTACT +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLRLWRF*ERHVTT
Trigger: AGTAGTGACATGTCTCTCTCAGAACCTCCACAGCCT...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCTCAGTGTTCCATGCTaGCCCATAGTTAATGCTGGC +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSLSVPC*PIVNAG
Trigger: GCCAGCATTAACTATGGGTCAGCATGGAACACTGAG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTGAAGTTGGAGTTTTCTaGGATCTTCCCTTATCTGAT +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVEVGVF*DLPLSD
Trigger: ATCAGATAAGGGAAGATCTCAGAAAACTCCAACTTC...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAAGCCACGACAGCATCTaGGATATGAGTTCTAGTCAA +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELSHDSI*DMSSSQ
Trigger: TTGACTAGAACTCATATCTCAGATGCTGTCGTGGCT...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTTTTACTCTGAGAGAGTaGAACAGATGGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LQDGTEGLSWRLLPLLLLFTLRE*NRWTFP
Trigger: AGGAAAAGTCCATCTGTTTCACTCTCTCAGAGTAAA...AAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTCTTACAAGATGGAACTaGAGGACTTTCTTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTLTRWN*RTFLAA
Trigger: AGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAG...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGCTTGTTTTTCCATTTaGCGAATTTCTGCTTCTTCT +
Preference number: 4 (lower is better)
Translates to: ESVRTATATFLAAFLTRLACFSI*RISASS
Trigger: AGAAGAAGCAGAAATTCGTCAAATGGAAAAACAAGC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCTCAGTAAGTATACTGTaGTCTGGACTCCCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVSVSIL*SGLPGC
Trigger: GCAGCCAGGGAGTCCAGATCACAGTATACTTACTGA...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTAGGGTTTTTCAGAAGCTaGGGAGAGCGTTTTAATCTG +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVGFFRS*GERFNL
Trigger: CAGATTAAAACGCTCTCCTCAGCTTCTGAAAAACCC...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCTTTTCCTTGATGATCTaGGAACTGGAGATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFFSLMI*ELEMGS
Trigger: AGACCCCATCTCCAGTTCTCAGATCATCAAGGAAAA...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGTCCAACCTTGCCATCTaGCATATCAAGAATTCTACT +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQSNLAI*HIKNST
Trigger: AGTAGAATTCTTGATATGTCAGATGGCAAGGTTGGA...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGCTGATATCGTTCATCTaGGTAACAGTCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQLISFI*VTVFIF
Trigger: GAAGATGAAGACTGTTACTCAGATGAACGATATCAG...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCACTGAAGACTGCTGGTaGACATGGGCTTCAAGTACC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVTEDCW*TWASST
Trigger: GGTACTTGAAGCCCATGTTCACCAGCAGTCTTCAGT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTCAGGAACTCCCGGCTaGGTTCAAGTTCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHSGTPG*VQVQQV
Trigger: GACTTGCTGAACTTGAACTCAGCCGGGAGTTCCTGA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTCAGGAACTCCCGGCTaGGTTCAAGTTCAGCAAGTC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSSGTPG*VQVQQV
Trigger: GACTTGCTGAACTTGAACTCAGCCGGGAGTTCCTGA...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTCATCCAGACAGGTTaGTTTAAGTTGGGATCCTCA +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPFIQTG*FKLGSS
Trigger: TGAGGATCCCAACTTAAATCAACCTGTCTGGATGAA...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCCTGCATTGGTCCTTTaGGCCCAGTCTTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLPALVL*AQSSVG
Trigger: CCCTACTGAAGACTGGGCTCAAAGGACCAATGCAGG...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAGTTTGCAGGCCAAAATaGATTATTTCCACTTTGCCA +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRVCRPK*IISTLP
Trigger: TGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAAC...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGATGTGACTATTGGCTaGAAATGGCCTGATGACCAG +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTDVTIG*KWPDDQ
Trigger: CTGGTCATCAGGCCATTTTCAGCCAATAGTCACATC...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCTCCGTTCTTCTCGACTaGCTATCATCCAGTTACCGC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVSVLLD*LSSSYR
Trigger: GCGGTAACTGGATGATAGGCAGTCGAGAAGAACGGA...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGACTACTACCTGTTCTaGATTCTGTACTTGATAACT +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVDYYLF*ILYLIT
Trigger: AGTTATCAAGTACAGAATGCAGAACAGGTAGTAGTC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATACAGTATCTTGCTTTaGAGTGTGAGCTGTAGAATC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRYSILL*SVSCRI
Trigger: GATTCTACAGCTCACACTGCAAAGCAAGATACTGTA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATTCCTTTCCTCCTGCTaGCTAACAATGTACTGTCGT +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVFLSSC*LTMYCR
Trigger: ACGACAGTACATTGTTAGGCAGCAGGAGGAAAGGAA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGTCACTACTGGAAGATaGACTTGGGGGACGTTCCTG +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLVTTGR*TWGTFL
Trigger: CAGGAACGTCCCCCAAGTGCATCTTCCAGTAGTGAC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTAATGGGAGCCACGTTCTaGTTTTTCCTCATCAAGAAG +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVMGATF*FFLIKK
Trigger: CTTCTTGATGAGGAAAAAGCAGAACGTGGCTCCCAT...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATCAGGAAGAGATGGAACACTATCACTTCGTAGAGAATCATCTGCAGCAGTCTTGCTATTTTACACGTTaGTTCCTGCAGGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: HQEEMEHYHFVENHLQQSCYFTR*FLQDFS
Trigger: ACTGAAGTCCTGCAGGAAGCAACGTGTAAAATAGCA...AGACTGCTGCAGATGATTCTCTACGAAGTGATAGTGTTCCATCTCTTCCTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR GCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCACAAAGTCTGGAAGGTaGTGCCGTTGGTGGTCATAC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVTKSGR*CRWWSY
Trigger: GTATGACCACCAACGGCAGCACCTTCCAGACTTTGT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGCGTTGCATTAATTTTTaGTCCCGCTTTGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQRCINF*SRFVRN
Trigger: GTTTCTGACAAAGCGGGAGCAAAAATTAATGCAACG...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCATTCAACAGCAGGGCTaGCTAATTCTTCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFIQQQG*LILLEW
Trigger: CCATTCCAGAAGAATTAGGCAGCCCTGCTGTTGAAT...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGTAACTTGCTGTTCATaGTCCACATCACTGCGCTCC +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIVTCCS*STSLRS
Trigger: GGAGCGCAGTGATGTGGAGCATGAACAGCAAGTTAC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTTCTGTAAACTGCTGTTaGTTCTCCAATTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVSVNCC*FSNSSE
Trigger: TTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGA...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATCCTCTTCTGTAAACTaGTGTTGCTTCTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRSSSVN*CCFSNS
Trigger: AGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTACCAAAGTTCTTCTGCTaGATTATGTACAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVPKFFC*IMYKNL
Trigger: GAGATTCTTGTACATAATGCAGCAGAAGAACTTTGG...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAGTCCAGAAGCACTCTTaGTATGATGGCGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQVQKHS*YDGDGC
Trigger: ACACCCATCGCCATCATAGCAAGAGTGCTTCTGGAC...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACTCCCAGAGAATGCTTTaGAATGTGTTTGCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDSQRML*NVFAKK
Trigger: CTTCTTGGCAAACACATTGCAAAGCATTCTCTGGGA...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTAGTGGATTTGGAGATTaGAGCATTAACCCAAGAATC +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVSGFGD*SINPRI
Trigger: GATTCTTGGGTTAATGCTCCAATCTCCAAATCCACT...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAGTCAGATTCTCCAGATaGCTGATACCCTGGTTTGGC +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQVRFSR*LIPWFG
Trigger: GCCAAACCAGGGTATCAGCCATCTGGAGAATCTGAC...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATTAATGACGCTATGTaGACTTCCCTTTGCCAATTC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRINDAM*TSLCQF
Trigger: GAATTGGCAAAGGGAAGTCCACATAGCGTCATTAAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAATCTACATCTGACAGTTaGCGCACCGACTCCTCAATG +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQSTSDS*RTDSSM
Trigger: CATTGAGGAGTCGGTGCGCCAACTGTCAGATGTAGA...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAGGAAGGTGCTGCCGTTaGTGGTCATACAGTATTGCA +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQGRCCR*WSYSIA
Trigger: TGCAATACTGTATGACCACCAACGGCAGCACCTTCC...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCACTGAAGGACTTTCTTaGCGGCTGCTACCACTGCTA +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVTEGLS*RLLPLL
Trigger: TAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGTGATCTGGACTCCCTaGCTGCTCCTGTCCTATAGA +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMVIWTP*LLLSYR
Trigger: TCTATAGGACAGGAGCAGCCAGGGAGTCCAGATCAC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTCCTTCAATATCACTCTaGTCAGATGTAGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: STVHTRRLNLPENALQCVPSISL*SDVVSD
Trigger: GTCAGAAACTACATCTGACCAGAGTGATATTGAAGG...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGCTCCTCATTGGCTGTaGCTTATCTCTGCAAGACTG +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSAPHWL*LISARL
Trigger: CAGTCTTGCAGAGATAAGCCACAGCCAATGAGGAGC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTCTGGGACACATATCTaGAGAGGAAATCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWSGTHI*RGNLFF
Trigger: AAAGAAGAGATTTCCTCTCCAGATATGTGTCCCAGA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGAACCCATTAATCCAGTaGATAGTCTCGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWNPLIQ*IVSKGK
Trigger: TTTGCCTTTCGAGACTATCCACTGGATTAATGGGTT...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAAAAAAGATACCAATATaGAACGAGTGGCTGGGTATC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRKKIPI*NEWLGI
Trigger: GATACCCAGCCACTCGTTCCATATTGGTATCTTTTT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367607.8
3UTR CAA 72 bp TCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTaGCAGGCCAAAATGAATTATTTCCACTTTGCCATG +
Preference number: 4 (lower is better)
Translates to: SLTSWGKMGVEG*QAKMNYFHFAM
Trigger: CATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGATTCTCCAGATGGCTaGTACCCTGGTTTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLDSPDG*YPGLAC
Trigger: ACAGGCCAAACCAGGGTATCAGCCATCTGGAGAATC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATTTAGAAGAAGTAGATaGACGAGACGATGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVFRRSR*TRRCSR
Trigger: TCTGCTGCATCGTCTCGTTCATCTACTTCTTCTAAA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCACTGCTACTTCTTCTATCATCTACTTCTTCTATCATaGTTCTTGTATCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: MELKDFLGGCYHCYFFYHLLLLS*FLYPED
Trigger: GTCTTCAGGATACAAGAATCATGATAGAAGAAGTAG...ATGATAGAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAGCTATCTTGTCCTCCTaGGAATGGCATGTTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLAILSS*EWHVQF
Trigger: GAACTGAACATGCCATTCTCAGGAGGACAAGATAGC...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTTCACTGCTGGAGATTaGAATGGGAGAAGGACTGCG +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHFTAGD*NGRRTA
Trigger: CGCAGTCCTTCTCCCATTTCAATCTCCAGCAGTGAA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAGCTAGACTCCTGCTTTaGCACAGATGTGCAGCTTTT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIARLLL*HRCAAF
Trigger: AAAAGCTGCACATCTGTGTCAAAGCAGGAGTCTAGC...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTGTCCTCCAGTCCTATaGCTTCCTTTGCTAGACTCC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSCPPVL*LPLLDS
Trigger: GGAGTCTAGCAAAGGAAGTCATAGGACTGGAGGACA...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGACTTGATAGGCAGGTaGCATTGTCCTCCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLDLIGR*HCPPVL
Trigger: TAGGACTGGAGGACAATGTCACCTGCCTATCAAGTC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAGGCTTGGCTGTTGGTaGTGTTTCCAAATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVRLGCW*CFQILA
Trigger: AGCCAAGATTTGGAAACATCACCAACAGCCAAGCCT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAACTCAGAACCAGACAGTaGAGCATCAACATGTTCAGC +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQLRTRQ*SINMFS
Trigger: GCTGAACATGTTGATGCTTCACTGTCTGGTTCTGAG...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAACTGGAGATGGGGTCTaGAAATCTTCTGTTCGACTG +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGTGDGV*KSSVRL
Trigger: CAGTCGAACAGAAGATTTTCAGACCCCATCTCCAGT...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTACTGGAGATGGGGTCTaGAAATCTTCTGTTCGACTG +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHITGDGV*KSSVRL
Trigger: CAGTCGAACAGAAGATTTTCAGACCCCATCTCCAGT...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTTTTCCTTGATGATCTaGGAACTGGAGATGGGGTCT +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTFSLMI*ELEMGS
Trigger: AGACCCCATCTCCAGTTCTCAGATCATCAAGGAAAA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATTCATCCAGACAGGTTaGTTTAAGTTGGGATCCTCA +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVFIQTG*FKLGSS
Trigger: TGAGGATCCCAACTTAAATCAACCTGTCTGGATGAA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGAAGCACTCTTGCTATaGTGGCGATGGGTGTACATC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSEALLL*WRWVYI
Trigger: GATGTACACCCATCGCCATCATAGCAAGAGTGCTTC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCGGGAAAGATGGGAGTTaGAGGTTTGCAGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVGKDGS*RFAGQN
Trigger: ATTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCC...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTACCTGTGCAAAGACTATaGACCATAGAAGCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVPVQRL*TIEASR
Trigger: TCTTGAAGCTTCTATGGTTCATAGTCTTTGCACAGG...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAGGTAAGACATCAATCTaGGCATTTCCCGAGACCCAA +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIGKTSI*AFPETQ
Trigger: TTGGGTCTCGGGAAATGCTCAGATTGATGTCTTACC...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTGGGAAAACAGACACTaGGAGAGGCCCAGTGATGAG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLWENRH*ERPSDE
Trigger: CTCATCACTGGGCCTCTCTCAGTGTCTGTTTTCCCA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000429851.5
CDS-3UTR GCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAATCCATCTTCTTGAGGTaGCTGCTGCACATCATACTC +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQSIFLR*LLHIIL
Trigger: GAGTATGATGTGCAGCAGGCACCTCAAGAAGATGGA...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTTACACGTTGCTTCCTaGAGGACTTCAGTTACTTCC +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTLHVAS*RTSVTS
Trigger: GGAAGTAACTGAAGTCCTGCAGGAAGCAACGTGTAA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTATGCTATTTTACACGTTaGTTCCTGCAGGACTTCAGT +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELCYFTR*FLQDFS
Trigger: ACTGAAGTCCTGCAGGAAGCAACGTGTAAAATAGCA...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGACTTTCTTGGCGGCTaGTACCACTGCTACTTCTTC +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLDFLGG*YHCYFF
Trigger: GAAGAAGTAGCAGTGGTAGCAGCCGCCAAGAAAGTC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCCAATTTACTCTCCCCTaGAGACTTCAATTTCTCCTG +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFQFTLP*RLQFLL
Trigger: CAGGAGAAATTGAAGTCTGCAGGGGAGAGTAAATTG...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGCTGTGGCTTATCTCTaGAAGACTGAGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIAVAYL*KTESLS
Trigger: GGAAAGACTCTCAGTCTTGCAGAGATAAGCCACAGC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAGCTGTGGCTTATCTCTaGAAGACTGAGAGTCTTTCC +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLAVAYL*KTESLS
Trigger: GGAAAGACTCTCAGTCTTGCAGAGATAAGCCACAGC...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTATAGTTCACCCACTGTaGCTCCTCCTCATGGAGCTC +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLIVHPL*LLLMEL
Trigger: GAGCTCCATGAGGAGGAGGCACAGTGGGTGAACTAT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATCCCGTCGGCTAGCTaGATTTTCACACACAACTCA +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVIPSAS*IFTHNS
Trigger: TGAGTTGTGTGTGAAAATGCAGCTAGCCGACGGGAT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCATCCCGTCGGCTAGCTaGATTTTCACACACAACTCA +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTIPSAS*IFTHNS
Trigger: TGAGTTGTGTGTGAAAATGCAGCTAGCCGACGGGAT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGTCCAGAAGCACTCTTaGTATGATGGCGATGGGTGT +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSVQKHS*YDGDGC
Trigger: ACACCCATCGCCATCATAGCAAGAGTGCTTCTGGAC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCCAGTCCACTTGGTGCTaGTCAACTACAATAATGGAA +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFQSTWC*STTIME
Trigger: TTCCATTATTGTAGTTGAGCAGCACCAAGTGGACTG...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAATATGCTGGAGCAGGTaGTGCTGTTGCCACTTTTCT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIICWSR*CCCHFS
Trigger: AGAAAAGTGGCAACAGCACCACCTGCTCCAGCATAT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGAAACCTTTATATGCTaGAGCAGGTGGTGCTGTTGC +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSETFIC*SRWCCC
Trigger: GCAACAGCACCACCTGCTCCAGCATATAAAGGTTTC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGGTGCTGATGACTTCTaGTTCTGTAACTCTACAGTA +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFGADDF*FCNSTV
Trigger: TACTGTAGAGTTACAGAACCAGAAGTCATCAGCACC...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTGCCAATTCTTCCCATaGTCCTTTGCTTTGTGTACC +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTCQFFP*SFALCT
Trigger: GGTACACAAAGCAAAGGACCATGGGAAGAATTGGCA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACGCTCCTGATGAATGCTaGGAGGTAACATCCACAGAG +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHAPDEC*EVTSTE
Trigger: CTCTGTGGATGTTACCTCCCAGCATTCATCAGGAGC...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTCAGTTGGACCAGGACTaGTTGCCTTATTATCCTTTG +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTQLDQD*LPYYPL
Trigger: CAAAGGATAATAAGGCAACCAGTCCTGGTCCAACTG...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAACTCCAGGGATCCTCTaGAACGTTCTGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIITPGIL*NVLTLL
Trigger: TAACAGAGTCAGAACGTTCCAGAGGATCCCTGGAGT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGGAATCGAAGAATTCCTaGCTGAACATTTCCAATCAA +
Preference number: 4 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQESKNS*LNISNQ
Trigger: TTGATTGGAAATGTTCAGCCAGGAATTCTTCGATTC...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGAATCGAAGAATTCCTaGCTGAACATTTCCAATCAA +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWESKNS*LNISNQ
Trigger: TTGATTGGAAATGTTCAGCCAGGAATTCTTCGATTC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACTCTGGGACACATATCTaGAGAGGAAATCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDSGTHI*RGNLFF
Trigger: AAAGAAGAGATTTCCTCTCCAGATATGTGTCCCAGA...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGTATTTCCACACTACTaGTTAATAACCCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: VGLHCATLPTENNPLIQWVFPHY*LITPRN
Trigger: GTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATAC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTCTCTACTCATGTTTTaGAACTCAGCCTCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLSLLMF*NSASCH
Trigger: GTGGCAGGAGGCTGAGTTTCAAAACATGAGTAGAGA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAATATCATCTGCAAAGTaGAGTGCTAAATCTCGATAC +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPISSAK*SAKSRY
Trigger: GTATCGAGATTTAGCACTTCACTTTGCAGATGATAT...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCTTCCCAGCATCTTCTaGATTCTGGCAGAGAAAACA +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSLPSIF*ILAEKT
Trigger: TGTTTTCTCTGCCAGAATTCAGAAGATGCTGGGAAG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGGGCTTAAAGTGCTATaGGGTTCAAGAGTTGATTTT +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFGLKVL*GSRVDF
Trigger: AAAATCAACTCTTGAACCTCATAGCACTTTAAGCCC...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCTTCCTCATCAAGAAGTaGGTTCTGAACATTTCCAGT +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFFLIKK*VLNISS
Trigger: ACTGGAAATGTTCAGAACTCACTTCTTGATGAGGAA...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATATGTGCCTTTATTATCTaGGCTAGAGACACACTCTCC +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIICAFII*ARDTLS
Trigger: GGAGAGTGTGTCTCTAGCTCAGATAATAAAGGCACA...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAATCTTCTAATTGTCTCTaGCTCTCCAGAGCCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQSSNCL*LSRASC
Trigger: ACAAGAGGCTCTGGAGAGTCAGAGACAATTAGAAGA...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAACTTCCCGTTGTGATTaGACCACCTGCTGTAATGAT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIITSRCD*TTCCND
Trigger: ATCATTACAGCAGGTGGTTCAATCACAACGGGAAGT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGAATCATCTGCAGCAGTCTGAACCTGTTCATCAATGGAACTCTCTATCTTTTCATACTTCTGATGCTTTaGGTCAAGGGTCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: RIICSSLNLFINGTLYLFILLML*VKGPFF
Trigger: AAAGAAGGGACCCTTGACTCAAAGCATCAGAAGTAT...GAAAAGATAGAGAGTTCCATTGATGAACAGGTTCAGACTGCTGCAGATGATTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTAGTATCATCATCACTATaGGAGTCCAATTTACTCTCC +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVVSSSL*ESNLLS
Trigger: GGAGAGTAAATTGGACTCTCATAGTGATGATGATAC...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCAGCTGGTTCACAACTaGTTTTCTTTTCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSQLVHN*FSFPQL
Trigger: GAGTTGCGGAAAAGAAAATCAGTTGTGAACCAGCTG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGATGACTCTAACTGCTTaGTCAGACTGGCTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMMTLTA*SDWLLG
Trigger: CCCAAGAAGCCAGTCTGATCAAGCAGTTAGAGTCAT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGAGAGCGTTTTAATCTaGGGCTTGGCTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSESVLI*GLAVGD
Trigger: ATCACCAACAGCCAAGCCTCAGATTAAAACGCTCTC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGAGAGCGTTTTAATCTaGGGCTTGGCTGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMESVLI*GLAVGD
Trigger: ATCACCAACAGCCAAGCCTCAGATTAAAACGCTCTC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTTATCTCTGCAAGACTaGGAGTCTTTCCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTLSLQD*ESFLSD
Trigger: GTCACTCAGGAAAGACTCTCAGTCTTGCAGAGATAA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATATCACCAAGAAGCTCCTaGTTGCTAAGCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIISPRSS*LLSWIF
Trigger: GAAAATCCAGCTTAGCAATCAGGAGCTTCTTGGTGA...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATCACCAAGAAGCTCCTaGTTGCTAAGCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLSPRSS*LLSWIF
Trigger: GAAAATCCAGCTTAGCAATCAGGAGCTTCTTGGTGA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATCAGACTCAAAGAAGTaGTACCCTAGTCTAAACTCA +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVSDSKK*YPSLNS
Trigger: TGAGTTTAGACTAGGGTATCACTTCTTTGAGTCTGA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAATCGTAAGGACAACGTaGTCCTACAAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIIVRTT*SYKQPK
Trigger: CTTTGGCTGTTTGTAGGATCACGTTGTCCTTACGAT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCATCGTAAGGACAACGTaGTCCTACAAACAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTIVRTT*SYKQPK
Trigger: CTTTGGCTGTTTGTAGGATCACGTTGTCCTTACGAT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTAGCAGGTGGTGCTGTTaGCACTTTTCTGACTTTTGC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSSRWCC*HFSDFC
Trigger: GCAAAAGTCAGAAAAGTGGCAACAGCACCACCTGCT...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACTCTTCCTTTCCTCCTaGTGCCTAACAATGTACTGT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIILFLSS*CLTMYC
Trigger: ACAGTACATTGTTAGGCAGCAGGAGGAAAGGAAGAG...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGACTTCCCATGGTCCTTTaGTTTGTGTACCACCTATGT +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGLPMVL*FVYHLC
Trigger: ACATAGGTGGTACACAAAGCAAAGGACCATGGGAAG...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCCTGAGGGCTTAAAGTaGTATGAGGTTCAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTPEGLK*YEVQEL
Trigger: CAACTCTTGAACCTCATAGCACTTTAAGCCCTCAGG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTCCTGCAACGTCAAACTaGAATGATTTCTGGGAACTT +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTPATSN*NDFWEL
Trigger: AAGTTCCCAGAAATCATTGCAGTTTGACGTTGCAGG...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTCAGATCAGTGAGAGGTaGATTAGGCTTAAATCCTGT +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTQISER*IRLKSC
Trigger: ACAGGATTTAAGCCTAATGCACCTCTCACTGATCTG...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACATAACTGAGTTCTGCTaGCATACGATGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHITEFC*HTMMEA
Trigger: GGCCTCCATCATCGTATGGCAGCAGAACTCAGTTAT...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTTTCTATCTCCTCCTaGTGTTTAAGAATCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LAKGVGLHCATLPTENNPFSISS*CLRISC
Trigger: ACAGCTGATTCTTAAACAGCAGGAGGAGATAGAAAA...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAATTCAACAGCAGGGCTaGCTAATTCTTCTGGAATGG +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQIQQQG*LILLEW
Trigger: CCATTCCAGAAGAATTAGGCAGCCCTGCTGTTGAAT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCATGCTCCACATCACTaGGCTCCTTACTTTTCATCA +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTHAPHH*APYFSS
Trigger: TGATGAAAAGTAAGGAGCGCAGTGATGTGGAGCATG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGGGGATTCAGTAACTTaGTGTTCATGCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTGDSVT*CSCSTS
Trigger: TGATGTGGAGCATGAACAGCAAGTTACTGAATCCCC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAAATCTCTACTTCTTCTaGAGTATGGGGGACTGCCAA +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLNLYFF*SMGDCQ
Trigger: TTGGCAGTCCCCCATACTGCAGAAGAAGTAGAGATT...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATACACTGTGCAACCCTaGCCACTGAAAATAACCCAT +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLYTVQP*PLKITH
Trigger: ATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCAAATTCTTTAGATGGTaGTCAGAAAGCAAGGCTACC +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFKFFRW*SESKAT
Trigger: GGTAGCCTTGCTTTCTGAGCACCATCTAAAGAATTT...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTGTCAGGACAGCTACTaGCACATTCTTGGCAGCATT +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSCQDSY*HILGSI
Trigger: AATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACA...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGAACCTCCCAGAGAATaGTTTGCAATGTGTTTGCCA +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTEPPRE*FAMCLP
Trigger: TGGCAAACACATTGCAAAGCATTCTCTGGGAGGTTC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAGTGCATCCCACGATGTaGTTATATCTGCTTGAACAG +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGVHPTM*LYLLEQ
Trigger: CTGTTCAAGCAGATATAACCACATCGTGGGATGCAC...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCTTGATGACAGATGATTaGGAGCTCTCAAAATCACAG +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFLMTDD*ELSKSQ
Trigger: CTGTGATTTTGAGAGCTCCCAATCATCTGTCATCAA...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATTTCTAGTAGCAATTTaGAGTAAGTTTCCTGTAGTC +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRFLVAI*SKFPVV
Trigger: GACTACAGGAAACTTACTCCAAATTGCTACTAGAAA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAAAGCGCTTAGAACCTaGTATTGGAGCCATGTTCTC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVKALRT*YWSHVL
Trigger: GAGAACATGGCTCCAATACCAGGTTCTAAGCGCTTT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCTCTCCTGTAGTTTTATaGTGGTCTGTCGGATCTTTT +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFSPVVL*WSVGSF
Trigger: AAAAGATCCGACAGACCACCATAAAACTACAGGAGA...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTCCTATAGACTCGGATaGTACATATTCAACAGCAGG +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTSYRLG*YIFNSR
Trigger: CCTGCTGTTGAATATGTACCATCCGAGTCTATAGGA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTAAGTATACTGTGATCTaGACTCCCTGGCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLKYTVI*TPWLLL
Trigger: CAGGAGCAGCCAGGGAGTCCAGATCACAGTATACTT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACACTCCAGGGATCCTCTaGAACGTTCTGACTCTGTTA +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHTPGIL*NVLTLL
Trigger: TAACAGAGTCAGAACGTTCCAGAGGATCCCTGGAGT...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTCTGAGAACTGGAGATaGGGTCTGAAAATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTSENWR*GLKIFC
Trigger: ACAGAAGATTTTCAGACCCCATCTCCAGTTCTCAGA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGTGTAGAGCTCCTCATTaGCTGTGGCTTATCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMCRAPH*LWLISA
Trigger: TGCAGAGATAAGCCACAGCCAATGAGGAGCTCTACA...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCTTCTTGGGGAAAGATaGGAGTTGAAGGTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMLLGER*ELKVCR
Trigger: CCTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGCATCTCTGACTTCTTaGGGAAAGATGGGAGTTGAA +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSASLTS*GKMGVE
Trigger: TTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATATCTTTTTGTCTTTaGTGCACACACTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRISFCL*CTHSFP
Trigger: AGGAAATGAGTGTGTGCACCAAAGACAAAAAGATAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCCCAATATGGAACGAGTaGCTGGGTATCCACATCTAT +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVPIWNE*LGIHIY
Trigger: ATAGATGTGGATACCCAGCCACTCGTTCCATATTGG...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATATACAGCTGGAATTTaGGATGAAGGTTGGGAAAAC +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVYTAGI*DEGWEN
Trigger: GTTTTCCCAACCTTCATCCCAAATTCCAGCTGTATA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429851.5
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAACAGTATCCTTGCTTTaGGAGTTCCTTGGATTTGGT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIITVSLL*EFLGFG
Trigger: ACCAAATCCAAGGAACTCTCAAAGCAAGGATACTGT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGACAGTATACGTGCTTTaGTTCCAGATGGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLTVYVL*FQMAGT
Trigger: AGTTCCAGCCATCTGGAATCAAAGCACGTATACTGT...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTCCACCTCTGTCACTTaGTGCTGTTCTTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHSTSVT*CCSLLF
Trigger: AAAGAGCAAAGAACAGCATCAAGTGACAGAGGTGGA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTCATCAAAAGTTGCATaGGATACACAGCTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHSSKVA*DTQLPS
Trigger: GCTGGGAAGCTGTGTATCTCATGCAACTTTTGATGA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCTTTTCAGCTTCTTTCTaGAACTCTTTGATGGGTTCA +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFFSASF*NSLMGS
Trigger: TGAACCCATCAAAGAGTTTCAGAAAGAAGCTGAAAA...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACGCAGTTTCTGACTGCTaGGCTGCTATTTTACACGTT +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHAVSDC*AAILHV
Trigger: AACGTGTAAAATAGCAGCTCAGCAGTCAGAAACTGC...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGACAGCATCTGAGATATaGGTTCTAGTCAACTCTGCC +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMTASEI*VLVNSA
Trigger: GGCAGAGTTGACTAGAACTCATATCTCAGATGCTGT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTTTACTCTGAGAGAGTaGAACAGATGGACTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTFTLRE*NRWTFP
Trigger: AGGAAAAGTCCATCTGTTTCACTCTCTCAGAGTAAA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGAAGCAGAATACTTCTaGTGCTTTGAGTCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSEAEYF*CFESRV
Trigger: GACCCTTGACTCAAAGCATCAGAAGTATTCTGCTTC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAGCCTTATTGGCTTCTTaGAGACGTTTTATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGALLAS*RRFISA
Trigger: GGCAGAAATAAAACGTCTTCAAGAAGCCAATAAGGC...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAACTTTCACTGTTTAGATaGGAGTACAGAGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQLSLFR*EYRGTG
Trigger: TCCAGTACCTCTGTACTCTCATCTAAACAGTGAAAG...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGCATCCTTCAGAGCTCTaGTCCTACCTTCAATATCAC +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLHPSEL*SYLQYH
Trigger: GTGATATTGAAGGTAGGATCAGAGCTCTGAAGGATG...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGGGTTTTTCAGAAGCTaGGGAGAGCGTTTTAATCTG +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMGFFRS*GERFNL
Trigger: CAGATTAAAACGCTCTCCTCAGCTTCTGAAAAACCC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTCACCAAGAAGCTCCTaGTTGCTAAGCTGGATTTTC +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHSPRSS*LLSWIF
Trigger: GAAAATCCAGCTTAGCAATCAGGAGCTTCTTGGTGA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTCATCAAACCAGTCTTaGTCATCTCCTAACGCGCTC +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLSSNQS*SSPNAL
Trigger: GAGCGCGTTAGGAGATGATCAAGACTGGTTTGATGA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAGGAATACTGATGCTATaGAGATCGTGGCCTAATTCT +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLGILML*RSWPNS
Trigger: AGAATTAGGCCACGATCTTCATAGCATCAGTATTCC...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCTTCATCCAGACAGGTTaGTTTAAGTTGGGATCCTCA +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVFIQTG*FKLGSS
Trigger: TGAGGATCCCAACTTAAATCAACCTGTCTGGATGAA...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAACTTGGTTTGAGAAAGTaGATCCCACGATGTGGTTAT +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQLGLRK*IPRCGY
Trigger: ATAACCACATCGTGGGATGCACTTTCTCAAACCAAG...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGTTGAAACCTTTATATaGTGGAGCAGGTGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLVETFI*WSRWCC
Trigger: ACAGCACCACCTGCTCCAGCATATAAAGGTTTCAAC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAATGTGTACCACCTATGTaGCCAAAAAGTGGCAAGAAT +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQCVPPM*PKSGKN
Trigger: ATTCTTGCCACTTTTTGGGCACATAGGTGGTACACA...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGGCGGCTGCTACCACTaGTACTTCTTCTATCATGAT +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLGGCYH*YFFYHD
Trigger: ATCATGATAGAAGAAGTAGCAGTGGTAGCAGCCGCC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAGAAACTTTTCATCCATaGGGCTTCTCATTTTCTTCA +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELETFHP*GFSFSS
Trigger: TGAAGAAAATGAGAAGCCGCATGGATGAAAAGTTTC...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGCTTTGACACAGATGTaGAGCTTTTGGGAAGTGAAT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTALTQM*SFWEVN
Trigger: ATTCACTTCCCAAAAGCTGCACATCTGTGTCAAAGC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGGGGATTCAGTAACTTaGTGTTCATGCTCCACATCA +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMGDSVT*CSCSTS
Trigger: TGATGTGGAGCATGAACAGCAAGTTACTGAATCCCC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTACCAAAGTTCTTCTGCTaGATTATGTACAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELPKFFC*IMYKNL
Trigger: GAGATTCTTGTACATAATGCAGCAGAAGAACTTTGG...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTACTTGAGTACTTCACTTaGTATGAAGCTCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELLEYFT*YEALDF
Trigger: GAAATCAAGAGCTTCATAGCAAGTGAAGTACTCAAG...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTGAAATATTTAAGATaGAAAGGCAAGTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFVKYLR*KGKFGG
Trigger: CCCTCCAAACTTGCCTTTGCATCTTAAATATTTCAC...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCTGTTCGGTGCAAAATTaGACTGGATGTGACTATTGG +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSCSVQN*TGCDYW
Trigger: CCAATAGTCACATCCAGTGCAATTTTGCACCGAACA...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACCCCTTAAGTGTTCGGTaGAAAATTGCACTGGATGTG +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHPLSVR*KIALDV
Trigger: CACATCCAGTGCAATTTTGCACCGAACACTTAAGGG...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGTGGAGTTACAGCCTTaGTCCAAGGTCCATCTTCTT +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLVELQP*SKVHLL
Trigger: AAGAAGATGGACCTTGGACCAAGGCTGTAACTCCAC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTAGCATCTTCTGAATTCTaGCAGAGAAAACATCTTCAT +
Preference number: 4 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVASSEF*QRKHLH
Trigger: ATGAAGATGTTTTCTCTGCCAGAATTCAGAAGATGC...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGCCAAGTCTCTTTCATaGCGTTGCTGTTGTGCCTTT +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLAKSLS*RCCCAF
Trigger: AAAGGCACAACAGCAACGCCATGAAAGAGACTTGGC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGAGAGTACAGAGGTACTaGAGATTCCTCTTCACTTGC +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLRVQRY*RFLFTC
Trigger: GCAAGTGAAGAGGAATCTCCAGTACCTCTGTACTCT...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAGATGTTTCCAAATCTTaGCTAAGCTCGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGDVSKS*LSSASV
Trigger: AACTGAAGCCGAGCTTAGCCAAGATTTGGAAACATC...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGATGTTTCCAAATCTTaGCTAAGCTCGGCTTCAGTT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTDVSKS*LSSASV
Trigger: AACTGAAGCCGAGCTTAGCCAAGATTTGGAAACATC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTCTGAGAACTGGAGATaGGGTCTGAAAATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTSENWR*GLKIFC
Trigger: ACAGAAGATTTTCAGACCCCATCTCCAGTTCTCAGA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCGGTGTTACTTTCTTTTaGTCATCACCAAGAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVGVTFF*SSPRSS
Trigger: GGAGCTTCTTGGTGATGACCAAAAGAAAGTAACACC...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTGTTCCTCAACATTTTaGGATAGGTCTTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTCSSTF*DRSWGV
Trigger: AACACCCCAAGACCTATCCCAAAATGTTGAGGAACA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAATGTTCCTCAACATTTTaGGATAGGTCTTGGGGTGTT +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQCSSTF*DRSWGV
Trigger: AACACCCCAAGACCTATCCCAAAATGTTGAGGAACA...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAACTTCTTCTGCAGTATaGGGGACTGCCAATAATGTT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIITSSAV*GTANNV
Trigger: AACATTATTGGCAGTCCCCCATACTGCAGAAGAAGT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATATATCTAGACCTTTACTaGCACAGCCAAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIYLDLY*HSQAVL
Trigger: CAAAACTGCTTGGCTGTGCCAGTAAAGGTCTAGATA...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCTATCTAGACCTTTACTaGCACAGCCAAGCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSYLDLY*HSQAVL
Trigger: CAAAACTGCTTGGCTGTGCCAGTAAAGGTCTAGATA...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTATCTGTTTTGTGGTTTaGCTCCTTTTTAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFICFVV*LLFKTE
Trigger: TTCAGTCTTAAAAAGGAGCCAAACCACAAAACAGAT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTCTATTGCAGGTGATCTaGAAAAGCCCATCTTCGTTT +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHILLQVI*KSPSSF
Trigger: AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAG...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACGAGGTCACATATGGTTaGGGTGTAAAAGTTAATGGC +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHEVTYG*GVKVNG
Trigger: GCCATTAACTTTTACACCTCAACCATATGTGACCTC...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAATGTTAAATCTGCGGTaGCTCTCTGAAGGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIMLNLR*LSEGSN
Trigger: ATTACTACCTTCAGAGAGTCACCGCAGATTTAACAT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCAGCTGGTTCACAACTaGTTTTCTTTTCCGCAACTC +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLQLVHN*FSFPQL
Trigger: GAGTTGCGGAAAAGAAAATCAGTTGTGAACCAGCTG...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACTGATATCGTTCATCTaGGTAACAGTCTTCATCTTC +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLLISFI*VTVFIF
Trigger: GAAGATGAAGACTGTTACTCAGATGAACGATATCAG...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGGAATACTGATGCTATaGAGATCGTGGCCTAATTCT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMGILML*RSWPNS
Trigger: AGAATTAGGCCACGATCTTCATAGCATCAGTATTCC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTCCCCTGCTTTTCACTaGTCTGATTCAGAACATCAA +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLSPAFH*SDSEHQ
Trigger: TTGATGTTCTGAATCAGATCAGTGAAAAGCAGGGGA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGGTAGAGATTCAGAATaGGTAAGACAAGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLGRDSE*VRQVQE
Trigger: CTCCTGCACTTGTCTTACTCATTCTGAATCTCTACC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGAAATTGCACTGGATGTaGCTATTGGCTGAAAATGGC +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMKLHWM*LLAENG
Trigger: GCCATTTTCAGCCAATAGTCACATCCAGTGCAATTT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGCTTTGTCAGAAACCTaGCCAACTGGTTGTAGATAT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMALSET*PTGCRY
Trigger: ATATCTACAACCAGTTGGTCAGGTTTCTGACAAAGC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000429851.5
CDS-3UTR GCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACCTAGAAGAGTCAGTCTaGCTTTTACATAACTGTGCC +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHLEESV*LLHNCA
Trigger: GGCACAGTTATGTAAAAGGCAGACTGACTCTTCTAG...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCGTTGCATTAATTTTTaGTCCCGCTTTGTCAGAAAC +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSRCINF*SRFVRN
Trigger: GTTTCTGACAAAGCGGGAGCAAAAATTAATGCAACG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCTCATATGACTCTAACTaGTTGATCAGACTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSSYDSN*LIRLAS
Trigger: AGAAGCCAGTCTGATCAAGCAGTTAGAGTCATATGA...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATCATATGACTCTAACTaGTTGATCAGACTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLSYDSN*LIRLAS
Trigger: AGAAGCCAGTCTGATCAAGCAGTTAGAGTCATATGA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATCTGTAAACTGCTGTTaGTTCTCCAATTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLSVNCC*FSNSSE
Trigger: TTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGATCCTCTTCTGTAAACTaGTGTTGCTTCTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGSSSVN*CCFSNS
Trigger: AGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGA...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGGAGAGCATCTCTTATaGTCTAATGTAGCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLGEHLL*SNVAAG
Trigger: TCCAGCTGCTACATTAGAGCATAAGAGATGCTCTCC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGAGTTTGGAGGGAAGATaGAGAAATAAACGAACGTGC +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMSLEGR*RNKRTC
Trigger: GCACGTTCGTTTATTTCTGCATCTTCCCTCCAAACT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGCTTTGCAATGTGTTTaGCAAGAAGGCTTTGCAAAG +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSALQCV*QEGFAK
Trigger: CTTTGCAAAGCCTTCTTGGCAAACACATTGCAAAGC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTATTAACAACCATTACTaGATGGTCAATATGACCCAG +
Preference number: 4 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTINNHY*MVNMTQ
Trigger: CTGGGTCATATTGACCATCCAGTAATGGTTGTTAAT...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTAACTGTGCTACTTTTTaGACTTTTCGTACTGGCTTG +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHINCATF*TFRTGL
Trigger: CAAGCCAGTACGAAAAGTCCAAAAAGTAGCACAGTT...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAAACATGTTGATGAGATaGCTCTTCAAGCAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIINMLMR*LFKQGL
Trigger: AAGACCTTGCTTGAAGAGCCATCTCATCAACATGTT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTAGAATGGTGAACTTGTaGGCTCAATCTTTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLRMVNL*AQSFRL
Trigger: CAGCCTGAAAGATTGAGCCCACAAGTTCACCATTCT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGACTTCTTCTGCAGTATaGGGGACTGCCAATAATGTT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMTSSAV*GTANNV
Trigger: AACATTATTGGCAGTCCCCCATACTGCAGAAGAAGT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAAACCCATTAATCCAGTaGATAGTCTCGAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGNPLIQ*IVSKGK
Trigger: TTTGCCTTTCGAGACTATCCACTGGATTAATGGGTT...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCTACTGCCACATTCTTaGCAGCATTTCTTACCAGAT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMLLPHS*QHFLPD
Trigger: ATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTATGGAACGAGTGGCTaGGTATCCACATCTATCTTT +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLYGTSG*VSTSIF
Trigger: AAAGATAGATGTGGATACCCAGCCACTCGTTCCATA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGATGTACTTATAAGATaGCTACTACCTGTTCTGCAT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTDVLIR*LLPVLH
Trigger: ATGCAGAACAGGTAGTAGTCATCTTATAAGTACATC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTATTTTGGCTTTGTCTTaGGAACAGGCTTGCATATCA +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSILALS*EQACIS
Trigger: TGATATGCAAGCCTGTTCTCAAGACAAAGCCAAAAT...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAACATTTCCAGTGAATaGATCCAACCATTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTNISSE*IQPFCL
Trigger: AAGACAGAATGGTTGGATTCATTCACTGGAAATGTT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTCTACTTCTTCTATCATaGTTCTTGTATCCTGAAGAC +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHILLLLS*FLYPED
Trigger: GTCTTCAGGATACAAGAATCATGATAGAAGAAGTAG...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTGTTGCAATAGACGTTaGGTCTTTTTCATCAGGAAG +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLCCNRR*VFFIRK
Trigger: CTTCCTGATGAAAAAGACTCAACGTCTATTGCAACA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR TCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCATAAACTCCAGAATGTaGAGTTGGCAGACATTATTG +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSINSRM*SWQTLL
Trigger: CAATAATGTCTGCCAACTTCACATTCTGGAGTTTAT...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR TCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAATAAACTCCAGAATGTaGAGTTGGCAGACATTATTG +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQINSRM*SWQTLL
Trigger: CAATAATGTCTGCCAACTTCACATTCTGGAGTTTAT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR GCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACACTGAAATTGGAAGGTaGACCATGGATTTCCCTATA +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHTEIGR*TMDFPI
Trigger: TATAGGGAAATCCATGGTGCACCTTCCAATTTCAGT...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCAATCTTTCAGGCTaGATCCATGTAGATTCCATC +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLLNLSG*IHVDSI
Trigger: GATGGAATCTACATGGATGCAGCCTGAAAGATTGAG...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCATCATCATCAAAAGTTaGATGAGATACACAGCTTCC +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSIIIKS*MRYTAS
Trigger: GGAAGCTGTGTATCTCATGCAACTTTTGATGATGAT...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAAAAGATCCTCCAAAGTaGTATCTGTATCAAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLKDPPK*YLYQES
Trigger: AGACTCTTGATACAGATAGCACTTTGGAGGATCTTT...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTGGACCAGGACTGGTTaGCTTATTATCCTTTGTATC +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLWTRTG*LIILCI
Trigger: GATACAAAGGATAATAAGGCAACCAGTCCTGGTCCA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCCAAAGTTCTTCTGCTaGATTATGTACAAGAATCTC +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSPKFFC*IMYKNL
Trigger: GAGATTCTTGTACATAATGCAGCAGAAGAACTTTGG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTTGGACTTTTCGTACTaGCTTGACTACTTTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSLDFSY*LDYFLL
Trigger: GAGAAGAAAGTAGTCAAGCCAGTACGAAAAGTCCAA...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGAACCTGTTCATCAATaGAACTCTCTATCTTTTCAC +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTEPVHQ*NSLSFH
Trigger: GTGAAAAGATAGAGAGTTCCATTGATGAACAGGTTC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTCCTTCAATATCACTCTaGTCAGATGTAGTTTCTGAC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSPSISL*SDVVSD
Trigger: GTCAGAAACTACATCTGACCAGAGTGATATTGAAGG...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCACCCTATCACCAATGTaGAAATCAAATAACTCGTCT +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTTLSPM*KSNNSS
Trigger: AGACGAGTTATTTGATTTCCACATTGGTGATAGGGT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTTCTGGGACACATATCTaGAGAGGAAATCTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSSGTHI*RGNLFF
Trigger: AAAGAAGAGATTTCCTCTCCAGATATGTGTCCCAGA...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTAGAGTTGATTCTACATaGCTTCATCCAGACAGGTTG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLRVDST*LHPDRL
Trigger: CAACCTGTCTGGATGAAGCCATGTAGAATCAACTCT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATATCAATTTGCTCATTATaGCTACAAGACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIISICSL*LQDYSS
Trigger: TGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGA...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCTCAATTTGCTCATTATaGCTACAAGACTACAGCTCA +
Preference number: 4 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSSICSL*LQDYSS
Trigger: TGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGA...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAGTATTTCCACACTACTaGTTAATAACCCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIVFPHY*LITPRN
Trigger: GTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATAC...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
3UTR CAA 72 bp ATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTaGCTTCTCTTAGTCAATTTGCTCATTATGGCTACA +
Preference number: 4 (lower is better)
Translates to: ISTLLVNNPKKP*LLLVNLLIMAT
Trigger: TGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR TCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTACTTCTCGAACGTTCTaGGTTTCTTTGAAGATGTCT +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLTSRTF*VSLKMS
Trigger: AGACATCTTCAAAGAAACTCAGAACGTTCGAGAAGT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGTTCAGAATTTTGCAATaGATCAATTGCTGGTCGATC +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMFRILQ*INCWSI
Trigger: GATCGACCAGCAATTGATGCATTGCAAAATTCTGAA...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTGCAAAATTCCTACATaGTCTAAACTCAAGAGATGG +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLCKIPT*SKLKRW
Trigger: CCATCTCTTGAGTTTAGAGCATGTAGGAATTTTGCA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGAATTTCTGCCTTTTCTTaGTGCAACCTTAAAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGISAFS*CNLKSK
Trigger: TTTGCTTTTAAGGTTGCAGCAAGAAAAGGCAGAAAT...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTCTGTAAACTGCTGTTaGTTCTCCAATTCTTCGGAA +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLSVNCC*FSNSSE
Trigger: TTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTCCTCTTCTGTAAACTaGTGTTGCTTCTCCAATTCT +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLSSSVN*CCFSNS
Trigger: AGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTCTTGAGTACTTCACTTaGTATGAAGCTCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSLEYFT*YEALDF
Trigger: GAAATCAAGAGCTTCATAGCAAGTGAAGTACTCAAG...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGTGAAATATTTAAGATaGAAAGGCAAGTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLVKYLR*KGKFGG
Trigger: CCCTCCAAACTTGCCTTTGCATCTTAAATATTTCAC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAGTTTACTCTTATATTaGCTGGCACTAGGTTTTAAC +
Preference number: 4 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVSLLLY*LALGFN
Trigger: GTTAAAACCTAGTGCCAGCCAATATAAGAGTAAACT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTTCATCAAGGTTATTTaGATTTTTCACTCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTFIKVI*IFHSSE
Trigger: TTCCGACGAGTGAAAAATCCAAATAACCTTGATGAA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCATCTGTTTTGTGGTTTaGCTCCTTTTTAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTICFVV*LLFKTE
Trigger: TTCAGTCTTAAAAAGGAGCCAAACCACAAAACAGAT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTATCTGTTTTGTGGTTTaGCTCCTTTTTAAGACTGAA +
Preference number: 4 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIICFVV*LLFKTE
Trigger: TTCAGTCTTAAAAAGGAGCCAAACCACAAAACAGAT...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAATATCTTTTTGTCTTTaGTGCACACACTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQISFCL*CTHSFP
Trigger: AGGAAATGAGTGTGTGCACCAAAGACAAAAAGATAT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CCA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGTATTTCCACACTACTaGTTAATAACCCCAAGAAAC +
Preference number: 4 (lower is better)
Translates to: REDAEINERAHLKIIPSLVFPHY*LITPRN
Trigger: GTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATAC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTTGAGTACTTCACTTaGTATGAAGCTCTTGATTTC +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLLEYFT*YEALDF
Trigger: GAAATCAAGAGCTTCATAGCAAGTGAAGTACTCAAG...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR GCA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTGTGAAATATTTAAGATaGAAAGGCAAGTTTGGAGGG +
Preference number: 4 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLVKYLR*KGKFGG
Trigger: CCCTCCAAACTTGCCTTTGCATCTTAAATATTTCAC...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CCA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTTCATCAAGGTTATTTaGATTTTTCACTCGTCGGAA +
Preference number: 4 (lower is better)
Translates to: KSYESLMLCYRNSFASTHFIKVI*IFHSSE
Trigger: TTCCGACGAGTGAAAAATCCAAATAACCTTGATGAA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CCA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGTTACACAGGTATACATaGGAATTCATCCCAGTTATT +
Preference number: 4 (lower is better)
Translates to: FSAFLICQELSYQSLCKMLHRYT*EFIPVI
Trigger: AATAACTGGGATGAATTCCCATGTATACCTGTGTAA...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 90 bp CCGCCCTCGGCTACCACGGTGCATCCCGCGGAGCCTGGCGGAGGGTaGAGTGACGCCGCCCCGACCGGCCCCAGGGCTGCCCGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: PPSATTVHPAEPGGG*SDAAPTGPRAARPG
Trigger: GCCAGGCCGGGCAGCCCTGGGGCCGGTCGGGGCGGCGTCACTGCACCCTCCGCCAGGCTCCGCGGGATGCACCGTGGTAGCCGAGGGCGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS TCA 90 bp CTCGGCTACCACGGTGCATCCCGCGGAGCCTGGCGGAGGGTGCAGTaGCGCCGCCCCGACCGGCCCCAGGGCTGCCCGGCCTGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: LGYHGASRGAWRRVQ*RRPDRPQGCPAWPP
Trigger: GGGAGGCCAGGCCGGGCAGCCCTGGGGCCGGTCGGGGCGGCGTCACTGCACCCTCCGCCAGGCTCCGCGGGATGCACCGTGGTAGCCGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS CCA 90 bp ACCGGGTGCCCTCCTCGCACCGGCTCCGGGGATCCGCCGGTCCGCTaGGAAGGAAGACAAGGCGGAAAGGCTGCCTCCCCTCCCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TGCPPRTGSGDPPVR*EGRQGGKAASPPSG
Trigger: CCCTGAGGGAGGGGAGGCAGCCTTTCCGCCTTGTCTTCCTTCCCAGCGGACCGGCGGATCCCCGGAGCCGGTGCGAGGAGGGCACCCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS CCA 90 bp CTGGTCCTCAGCTGTTTCACAAAGTCTGGAAGGTGCTGCCGTTGGTaGTCATACAGTATTGCAAGGGGAGCTCCTGAAGCCACGACAGCA +
Preference number: 5 (lower is better)
Translates to: LVLSCFTKSGRCCRW*SYSIARGAPEATTA
Trigger: TGCTGTCGTGGCTTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAGGACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS TCA 90 bp CATCTGACAGTTGGCGCACCGACTCCTCAATGGCGTTCAGATAACTaGGTTCTGCTGCCATACGATGATGGAGGCCAGCAGGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: HLTVGAPTPQWRSDN*VLLPYDDGGQQEKS
Trigger: GCTTTTCTCCTGCTGGCCTCCATCATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCATTGAGGAGTCGGTGCGCCAACTGTCAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 90 bp TTGGCGCACCGACTCCTCAATGGCGTTCAGATAACTGAGTTCTGCTaGCATACGATGATGGAGGCCAGCAGGAGAAAAGCGCTTAGAACC +
Preference number: 5 (lower is better)
Translates to: LAHRLLNGVQITEFC*HTMMEASRRKALRT
Trigger: GGTTCTAAGCGCTTTTCTCCTGCTGGCCTCCATCATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCATTGAGGAGTCGGTGCGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 90 bp CAGTTGGCGCACCGACTCCTCAATGGCGTTCAGATAACTGAGTTCTaGTGCCATACGATGATGGAGGCCAGCAGGAGAAAAGCGCTTAGA +
Preference number: 5 (lower is better)
Translates to: QLAHRLLNGVQITEF*CHTMMEASRRKALR
Trigger: TCTAAGCGCTTTTCTCCTGCTGGCCTCCATCATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCATTGAGGAGTCGGTGCGCCAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp GTTCTGGTCCTCAGCTGTTTCACAAAGTCTGGAAGGTGCTGCCGTTaGTGGTCATACAGTATTGCAAGGGGAGCTCCTGAAGCCACGACA +
Preference number: 5 (lower is better)
Translates to: VLVLSCFTKSGRCCR*WSYSIARGAPEATT
Trigger: TGTCGTGGCTTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAGGACCAGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS TCA 90 bp CTCACAGATTTGACGTGCTGCGTCTGTGGTGAGGCGAGCAGTTTCTaGCTGCTGAGCTGCTATTTTACACGTTGCTTCCTGCAGGACTTC +
Preference number: 5 (lower is better)
Translates to: LTDLTCCVCGEASSF*LLSCYFTRCFLQDF
Trigger: GAAGTCCTGCAGGAAGCAACGTGTAAAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTCACCACAGACGCAGCACGTCAAATCTGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000418229.5
ENST00000490047.1
CDS GCA 90 bp GTTTCAGTTCTGGTCCTCAGCTGTTTCACAAAGTCTGGAAGGTGCTaGCGTTGGTGGTCATACAGTATTGCAAGGGGAGCTCCTGAAGCC +
Preference number: 5 (lower is better)
Translates to: VSVLVLSCFTKSGRC*RWWSYSIARGAPEA
Trigger: GGCTTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAGGACCAGAACTGAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS TCA 90 bp TCTTTCACAGGTGGAGTTACAGCCTTGGTCCAAGGTCCATCTTCTTaGGGTGCCTGCTGCACATCATACTCAGTGTTCCATGCTGACCCA +
Preference number: 5 (lower is better)
Translates to: SFTGGVTALVQGPSS*GACCTSYSVFHADP
Trigger: TGGGTCAGCATGGAACACTGAGTATGATGTGCAGCAGGCACCTCAAGAAGATGGACCTTGGACCAAGGCTGTAACTCCACCTGTGAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTACACCACTTAGAGGAGTaGCGGTGGCATTCAAAGGCC +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVHHLEE*RWHSKA
Trigger: GGCCTTTGAATGCCACCGCAACTCCTCTAAGTGGTG...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGTGGTGTGAGGGGTTaGATCTTGGGTTTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSGVRG*ILGFSE
Trigger: TTCTGAAAAACCCAAGATCAAACCCCTCACACCACT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS GCA 90 bp AGAACCTGGTATTGGAGCCATGTTCTCTGTCGTTGTTCTGCTGGCTaGCGGGTTCAGATCAGTGAGAGGTGCATTAGGCTTAAATCCTGT +
Preference number: 5 (lower is better)
Translates to: RTWYWSHVLCRCSAG*RVQISERCIRLKSC
Trigger: ACAGGATTTAAGCCTAATGCACCTCTCACTGATCTGAACCCGGCAGCCAGCAGAACAACGACAGAGAACATGGCTCCAATACCAGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 90 bp TCTGTTTCAGTTCTGGTCCTCAGCTGTTTCACAAAGTCTGGAAGGTaGTGCCGTTGGTGGTCATACAGTATTGCAAGGGGAGCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: SVSVLVLSCFTKSGR*CRWWSYSIARGAPE
Trigger: TTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAGGACCAGAACTGAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS-3UTR CAA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTCCATGTTCTCTGTCGTaGTTCTGCTGGCTGCCGGGT +
Preference number: 5 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFPCSLS*FCWLPG
Trigger: ACCCGGCAGCCAGCAGAACAACGACAGAGAACATGG...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCCCTGCATTGGTCCTTaGAGCCCAGTCTTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: VGLHCATLPTENNPLIQWPCIGP*SPVFSR
Trigger: CCTACTGAAGACTGGGCTCAAAGGACCAATGCAGGG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGATCCCACTGCTGCTATaGCAGGTGATCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEIPLLL*QVIWKS
Trigger: GCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGAT...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 90 bp TTCTCCTTCAAGGCCTTTTCACGGAGACGCAGGAGTGAAGACTGGTaGGCTGCCCTCATTTCTTCCTCTTTCATATACTGTCGAACCATC +
Preference number: 5 (lower is better)
Translates to: FSFKAFSRRRRSEDW*AALISSSFIYCRTI
Trigger: GATGGTTCGACAGTATATGAAAGAGGAAGAAATGAGGGCAGCTCACCAGTCTTCACTCCTGCGTCTCCGTGAAAAGGCCTTGAAGGAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp AGCCTTAGTCTTCTCCTTCAAGGCCTTTTCACGGAGACGCAGGAGTaGAGACTGGTGAGCTGCCCTCATTTCTTCCTCTTTCATATACTG +
Preference number: 5 (lower is better)
Translates to: SLSLLLQGLFTETQE*RLVSCPHFFLFHIL
Trigger: CAGTATATGAAAGAGGAAGAAATGAGGGCAGCTCACCAGTCTTCACTCCTGCGTCTCCGTGAAAAGGCCTTGAAGGAGAAGACTAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp AACAGATGGACTTTTCCTCACAGATTTGACGTGCTGCGTCTGTGGTaGGGCGAGCAGTTTCTGACTGCTGAGCTGCTATTTTACACGTTG +
Preference number: 5 (lower is better)
Translates to: NRWTFPHRFDVLRLW*GEQFLTAELLFYTL
Trigger: CAACGTGTAAAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTCACCACAGACGCAGCACGTCAAATCTGTGAGGAAAAGTCCATCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS GCA 90 bp GTAGGAACTGAAGCCAAGGAAGGGGATTCAGTAACTTGCTGTTCATaGTCCACATCACTGCGCTCCTTACTTTTCATCAGCTCAGTAGGG +
Preference number: 5 (lower is better)
Translates to: VGTEAKEGDSVTCCS*STSLRSLLFISSVG
Trigger: CCCTACTGAGCTGATGAAAAGTAAGGAGCGCAGTGATGTGGAGCATGAACAGCAAGTTACTGAATCCCCTTCCTTGGCTTCAGTTCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS CCA 90 bp TTTCCTATCTGTTTCAGTTCTGGTCCTCAGCTGTTTCACAAAGTCTaGAAGGTGCTGCCGTTGGTGGTCATACAGTATTGCAAGGGGAGC +
Preference number: 5 (lower is better)
Translates to: FPICFSSGPQLFHKV*KVLPLVVIQYCKGS
Trigger: GCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAGGACCAGAACTGAAACAGATAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS-3UTR CAA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGCTCTTGTAATCGTTaGTTTTTCTGTTCTGTAGCC +
Preference number: 5 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSSCNR*FFCSVA
Trigger: GGCTACAGAACAGAAAAACAAACGATTACAAGAGCT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTAGTAGCCCTTCTGGTTaGGGACCAGGGGATCTCACT +
Preference number: 5 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFSSPSG*GPGDLT
Trigger: AGTGAGATCCCCTGGTCCCAAACCAGAAGGGCTACT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTTGCCATCTCACAGATTaGACGTGCTGCGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: STVHTRRLNLPENALQCVCHLTD*TCCVCG
Trigger: ACCACAGACGCAGCACGTCAAATCTGTGAGATGGCA...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACACAGATGTGCAGCTTTaGGGAAGTGAATGTTTACTA +
Preference number: 5 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHTDVQL*GSECLL
Trigger: TAGTAAACATTCACTTCCCAAAAGCTGCACATCTGT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACACCCTCTGTATCATTTaGCTCTTGATTATAGCACTG +
Preference number: 5 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHTLCII*LLIIAL
Trigger: CAGTGCTATAATCAAGAGCAAAATGATACAGAGGGT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGGGGAAAGATGGGAGTaGAAGGTTTGCAGGCCAAAA +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVGERWE*KVCRPK
Trigger: TTTTGGCCTGCAAACCTTCAACTCCCATCTTTCCCC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 90 bp AAGTTCTTCCTGCCCACTGGCACCAAATACTGGGCTCTCCTCTGGTaGCCATCTGGCTCAAGTTACTCAAAGTCATTACTTTTGCTCAAC +
Preference number: 5 (lower is better)
Translates to: KFFLPTGTKYWALLW*PSGSSYSKSLLLLN
Trigger: GTTGAGCAAAAGTAATGACTTTGAGTAACTTGAGCCAGATGGTCACCAGAGGAGAGCCCAGTATTTGGTGCCAGTGGGCAGGAAGAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496440.1
CDS-3UTR CAA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGTCAGGTGTTCGAATCTaGGTCTCTGAAGGGTTGAAA +
Preference number: 5 (lower is better)
Translates to: SAGVNQGVKEPALHWSFESGVRI*VSEGLK
Trigger: TTTCAACCCTTCAGAGACCAAGATTCGAACACCTGA...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCCCAAGGTCCATCTTCTaGAGGTGCCTGCTGCACATC +
Preference number: 5 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFPRSIF*RCLLHI
Trigger: GATGTGCAGCAGGCACCTCAAGAAGATGGACCTTGG...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTGGTGGAGTTACAGCCTaGGTCCAAGGTCCATCTTCT +
Preference number: 5 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFGGVTA*VQGPSS
Trigger: AGAAGATGGACCTTGGACCAAGGCTGTAACTCCACC...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAGGCATGTTCAGTTCCTaGGCAGTAGACAGTGTAGTT +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVGMFSS*AVDSVV
Trigger: AACTACACTGTCTACTGCCAAGGAACTGAACATGCC...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACAGCTTGTTTTTCCATTaGACGAATTTCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHSLFFH*TNFCFF
Trigger: GAAGAAGCAGAAATTCGTCAAATGGAAAAACAAGCT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGATAGGCAGGTGACATaGTCCTCCAGTCCTATGACT +
Preference number: 5 (lower is better)
Translates to: VGLHCATLPTENNPLIQWDRQVT*SSSPMT
Trigger: AGTCATAGGACTGGAGGACAATGTCACCTGCCTATC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AGTGCAGGAGTAAACCAAGGGGTAAAAGAACCAGCCCTGCATTGGTCCTTTGAGGGGTGTTACTTTCTTTaGGTCATCACCAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: SAGVNQGVKEPALHWSFEGCYFL*VITKKL
Trigger: GAGCTTCTTGGTGATGACCAAAAGAAAGTAACACCC...CTCAAAGGACCAATGCAGGGCTGGTTCTTTTACCCCTTGGTTTACTCCTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CTTGCTATGATGGCGATGGGTGTACATCAGGAGGCAGAAAGGCCCAGGACTCACACATCAATAGTATCTTaGATCAGGGTCTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: LAMMAMGVHQEAERPRTHTSIVS*IRVSKI
Trigger: GATCTTTGAGACCCTGATCAAAGATACTATTGATGT...GTGAGTCCTGGGCCTTTCTGCCTCCTGATGTACACCCATCGCCATCATAGCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 90 bp CCACTTGTAGAGCTCCTCATTGGCTGTGGCTTATCTCTGCAAGACTaGGAGTCTTTCCTGAGTGACAGCAAAGATGACACCTCAAAATCA +
Preference number: 5 (lower is better)
Translates to: PLVELLIGCGLSLQD*ESFLSDSKDDTSKS
Trigger: TGATTTTGAGGTGTCATCTTTGCTGTCACTCAGGAAAGACTCTCAGTCTTGCAGAGATAAGCCACAGCCAATGAGGAGCTCTACAAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS GCA 90 bp GGGAGAAGGACTGCGGGTCTCCAAGTCAGTTGGACCAGGACTGGTTaGCTTATTATCCTTTGTATCATCATCACTATGAGAGTCCAATTT +
Preference number: 5 (lower is better)
Translates to: GRRTAGLQVSWTRTG*LIILCIIITMRVQF
Trigger: AAATTGGACTCTCATAGTGATGATGATACAAAGGATAATAAGGCAACCAGTCCTGGTCCAACTGACTTGGAGACCCGCAGTCCTTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp TTCTTGCAAGAGGCTGTGGAGGTTCTGAGAGAGACATGTCACTACTaGAAGATGCACTTGGGGGACGTTCCTGTACTTTGTTTTCTTTGT +
Preference number: 5 (lower is better)
Translates to: FLQEAVEVLRETCHY*KMHLGDVPVLCFLC
Trigger: ACAAAGAAAACAAAGTACAGGAACGTCCCCCAAGTGCATCTTCCAGTAGTGACATGTCTCTCTCAGAACCTCCACAGCCTCTTGCAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTCAAAGGCCGTGATGTaGATGTTCCTCTGTCCAACT +
Preference number: 5 (lower is better)
Translates to: VGLHCATLPTENNPLIQWSKAVM*MFLCPT
Trigger: AGTTGGACAGAGGAACATCAACATCACGGCCTTTGA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATGGAAGGTGCTGCCGTaGGTGGTCATACAGTATTGC +
Preference number: 5 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVWKVLP*VVIQYC
Trigger: GCAATACTGTATGACCACCAACGGCAGCACCTTCCA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAGTGAGGGGTTTGATCTaGGGTTTTTCAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRVRGLI*GFSEAE
Trigger: CTCAGCTTCTGAAAAACCCAAGATCAAACCCCTCAC...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAAGCAACCTGAAATACTaGGCGACTGTTCCTCAACAT +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSNLKY*ATVPQH
Trigger: ATGTTGAGGAACAGTCGCCAAGTATTTCAGGTTGCT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTAGCCTGACAGTCCACTaGGTGCTGCTCAACTACAAT +
Preference number: 5 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFSLTVH*VLLNYN
Trigger: ATTGTAGTTGAGCAGCACCAAGTGGACTGTCAGGCT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAAGTAGGGGCATTTCTTaGTTTTCATGCCCACACAGA +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSRGIS*FSCPHR
Trigger: TCTGTGTGGGCATGAAAACAAAGAAATGCCCCTACT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTTTATCCCACTGCTGCTATaGCAGGTGATCTGGAAAAGC +
Preference number: 5 (lower is better)
Translates to: HFIPLLLLQVIWKSPSSFIPLLL*QVIWKS
Trigger: GCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGAT...AAACGAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGGAGAGTTCCTTGGATTaGGTAAAGGCACCTCTTTTG +
Preference number: 5 (lower is better)
Translates to: VGLHCATLPTENNPLIQWESSLD*VKAPLL
Trigger: CAAAAGAGGTGCCTTTACCAAATCCAAGGAACTCTC...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTTGCTTTGAGAGTTCCTaGGATTTGGTAAAGGCACCT +
Preference number: 5 (lower is better)
Translates to: STVHTRRLNLPENALQCVCFESS*DLVKAP
Trigger: AGGTGCCTTTACCAAATCCAAGGAACTCTCAAAGCA...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGCGTGATTTAGTGGATTaGGAGATTGGAGCATTAACC +
Preference number: 5 (lower is better)
Translates to: ESVRTATATFLAAFLTRLRDLVD*EIGALT
Trigger: GGTTAATGCTCCAATCTCCAAATCCACTAAATCACG...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTGGATGTGACCACAGTATACGTGCTTaGATTCCAGATGGCTGGAAC +
Preference number: 5 (lower is better)
Translates to: VLTNHTLKCSVQNCTGCDHSIRA*IPDGWN
Trigger: GTTCCAGCCATCTGGAATCAAAGCACGTATACTGTG...GTCACATCCAGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGTTAAGTTTTTCCAGTTaGACATCATGTTGTCGCCGC +
Preference number: 5 (lower is better)
Translates to: ESVRTATATFLAAFLTRLLSFSS*TSCCRR
Trigger: GCGGCGACAACATGATGTCAAACTGGAAAAACTTAA...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATCTTTAACAGAAAGTTaGCTGCTGGTCCCAGATTTC +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVSLTES*LLVPDF
Trigger: GAAATCTGGGACCAGCAGCAAACTTTCTGTTAAAGA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATATGACTCTAACTGCTaGATCAGACTGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRYDSNC*IRLASW
Trigger: CCAAGAAGCCAGTCTGATCAAGCAGTTAGAGTCATA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGTGAGGGGTTTGATCTaGGGTTTTTCAGAAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LAKGVGLHCATLPTENNPVRGLI*GFSEAE
Trigger: CTCAGCTTCTGAAAAACCCAAGATCAAACCCCTCAC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAAGTGGTGTGAGGGGTTaGATCTTGGGTTTTTCAGAA +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRSGVRG*ILGFSE
Trigger: TTCTGAAAAACCCAAGATCAAACCCCTCACACCACT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAACCCTGCATTGGTCCTTaGAGCCCAGTCTTCAGTAGG +
Preference number: 5 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQPCIGP*SPVFSR
Trigger: CCTACTGAAGACTGGGCTCAAAGGACCAATGCAGGG...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGTTTGCCAAGAAGGCTTaGCAAAGTCCAGAAGGAAAA +
Preference number: 5 (lower is better)
Translates to: ESVRTATATFLAAFLTRLFAKKA*QSPEGK
Trigger: TTTTCCTTCTGGACTTTGCAAAGCCTTCTTGGCAAA...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGACTCCCAGAGAATGCTTaGCAATGTGTTTGCCAAGAA +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRLPENA*QCVCQE
Trigger: TTCTTGGCAAACACATTGCAAAGCATTCTCTGGGAG...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp GTTACTGAGTTATCAACATTAACAACCATTACTGGATGGTCAATATaGCCCAGCTTCTGGCCCCGGCCATTTGTTTCTTCTGAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: VTELSTLTTITGWSI*PSFWPRPFVSSECS
Trigger: GGAACACTCAGAAGAAACAAATGGCCGGGGCCAGAAGCTGGGTCATATTGACCATCCAGTAATGGTTGTTAATGTTGATAACTCAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp GCAGGGCTGCCTAATTCTTCTGGAATGGAGCTTTCACTGTTTAGATaGGAGTACAGAGGTACTGGAGATTCCTCTTCACTTGCTATTTCT +
Preference number: 5 (lower is better)
Translates to: AGLPNSSGMELSLFR*EYRGTGDSSSLAIS
Trigger: AGAAATAGCAAGTGAAGAGGAATCTCCAGTACCTCTGTACTCTCATCTAAACAGTGAAAGCTCCATTCCAGAAGAATTAGGCAGCCCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 90 bp TTCATCAGCTCAGTAGGGGACTTGAGTTCCAACAGCCTGTCAGAATaGACATTGCTATGGATAGAAAGGCTTTTCTCACTTAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: FISSVGDLSSNSLSE*TLLWIERLFSLRHS
Trigger: TGAGTGCCTAAGTGAGAAAAGCCTTTCTATCCATAGCAATGTTCATTCTGACAGGCTGTTGGAACTCAAGTCCCCTACTGAGCTGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS GCA 90 bp TCCTGTAGTTTTATGGTGGTCTGTCGGATCTTTTCTATCTCCTCCTaGTGTTTAAGAATCAGCTGTCTTTCCTTCCGAGCTGCCTTATTG +
Preference number: 5 (lower is better)
Translates to: SCSFMVVCRIFSISS*CLRISCLSFRAALL
Trigger: CAATAAGGCAGCTCGGAAGGAAAGACAGCTGATTCTTAAACAGCAGGAGGAGATAGAAAAGATCCGACAGACCACCATAAAACTACAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp CACCTCTGTCACTTGATGCTGTTCTTTGCTCTTTTGGCTCCATTCTaGGAGCAGGTCCCAGAATCTTCTTTACTAATTTTTGTCCATCTC +
Preference number: 5 (lower is better)
Translates to: HLCHLMLFFALLAPF*EQVPESSLLIFVHL
Trigger: GAGATGGACAAAAATTAGTAAAGAAGATTCTGGGACCTGCTCCCAGAATGGAGCCAAAAGAGCAAAGAACAGCATCAAGTGACAGAGGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp AGAAAACATCTTCATTATCATCTTTCACAGGTGGAGTTACAGCCTTaGTCCAAGGTCCATCTTCTTGAGGTGCCTGCTGCACATCATACT +
Preference number: 5 (lower is better)
Translates to: RKHLHYHLSQVELQP*SKVHLLEVPAAHHT
Trigger: AGTATGATGTGCAGCAGGCACCTCAAGAAGATGGACCTTGGACCAAGGCTGTAACTCCACCTGTGAAAGATGATAATGAAGATGTTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp CGGATGGTACATATTCAACAGCAGGGCTGCCTAATTCTTCTGGAATaGAGCTTTCACTGTTTAGATGAGAGTACAGAGGTACTGGAGATT +
Preference number: 5 (lower is better)
Translates to: RMVHIQQQGCLILLE*SFHCLDESTEVLEI
Trigger: AATCTCCAGTACCTCTGTACTCTCATCTAAACAGTGAAAGCTCCATTCCAGAAGAATTAGGCAGCCCTGCTGTTGAATATGTACCATCCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCAGAGCAGCCTTGGTTaGAGAAAGTGCATCCCACGA +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTQSSLG*RKCIPR
Trigger: TCGTGGGATGCACTTTCTCAAACCAAGGCTGCTCTG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACTCTGGCCCCGGCCATTaGTTTCTTCTGAGTGTTCCC +
Preference number: 5 (lower is better)
Translates to: KSYESLMLCYRNSFASTHSGPGH*FLLSVP
Trigger: GGGAACACTCAGAAGAAACAAATGGCCGGGGCCAGA...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTCTGTTCTTTGCTCTTTaGGCTCCATTCTGGGAGCAG +
Preference number: 5 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTLFFAL*APFWEQ
Trigger: CTGCTCCCAGAATGGAGCCAAAAGAGCAAAGAACAG...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTACCATCAAGTCTTTTCTaGCAAGAGGCTGTGGAGGTT +
Preference number: 5 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVPSSLF*QEAVEV
Trigger: AACCTCCACAGCCTCTTGCAAGAAAAGACTTGATGG...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCAGTCTTGAGAACAGGCTaGCATATCAGAGCTAGAAGA +
Preference number: 5 (lower is better)
Translates to: LAKGVGLHCATLPTENNPVLRTG*HIRARR
Trigger: TCTTCTAGCTCTGATATGCAAGCCTGTTCTCAAGAC...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTCCATGGTCCTTTGCTTaGTGTACCACCTATGTGCCC +
Preference number: 5 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIPWSFA*CTTYVP
Trigger: GGGCACATAGGTGGTACACAAAGCAAAGGACCATGG...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACCCAGATTTCTTTCCTaGATGGGAGCCACGTTCTGC +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLPRFLS*MGATFC
Trigger: GCAGAACGTGGCTCCCATCAAGGAAAGAAATCTGGG...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGGTGGTCATACAGTATaGCAAGGGGAGCTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIGGHTV*QGELLK
Trigger: CTTCAGGAGCTCCCCTTGCAATACTGTATGACCACC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGAATACTTCTGATGCTTaGAGTCAAGGGTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQNTSDA*SQGSLL
Trigger: AAGAAGGGACCCTTGACTCAAAGCATCAGAAGTATT...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTAGATCAGACTGGCTTCTaGGGCTTTCAGTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVDQTGF*GFQSFL
Trigger: AAGGAAAGACTGAAAGCCCAAGAAGCCAGTCTGATC...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATATGACTCTAACTGCTaGATCAGACTGGCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: LAKGVGLHCATLPTENNPYDSNC*IRLASW
Trigger: CCAAGAAGCCAGTCTGATCAAGCAGTTAGAGTCATA...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AGTACAGTACACACAAGGAGGCTGAACCTCCCAGAGAATGCTTTGCAATGTGTTAAACTAGTCTCACCTTaGAATCGAAGAATTCCTGGC +
Preference number: 5 (lower is better)
Translates to: STVHTRRLNLPENALQCVKLVSP*NRRIPG
Trigger: GCCAGGAATTCTTCGATTCAAAGGTGAGACTAGTTT...AACACATTGCAAAGCATTCTCTGGGAGGTTCAGCCTCCTTGTGTGTACTGTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGGCTTCAGCATATAGGTaGTCTTCCTCTTCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQASAYR*SSSSVN
Trigger: GTTTACAGAAGAGGAAGACAACCTATATGCTGAAGC...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTAATTCTTCTAGATTACTaGAAGAGGGACAGGACTGAT +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVILLDY*KRDRTD
Trigger: ATCAGTCCTGTCCCTCTTCAAGTAATCTAGAAGAAT...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp AGAATCATCTGCAGCAGTCTGAACCTGTTCATCAATGGAACTCTCTATCTTTTCCTTTTCCTCACAGATTaGACGTGCTGCGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: RIICSSLNLFINGTLYLFLFLTD*TCCVCG
Trigger: ACCACAGACGCAGCACGTCAAATCTGTGAGGAAAAG...GAAAAGATAGAGAGTTCCATTGATGAACAGGTTCAGACTGCTGCAGATGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS TCA 90 bp GATGACTTCTGGTTCTGTAACTCTACAGTATCTTGCTTTGCAGTGTaGGCTGTAGAATCCAGCTGTAGGTCATCAAGAATGCCACGAATT +
Preference number: 5 (lower is better)
Translates to: DDFWFCNSTVSCFAV*AVESSCRSSRMPRI
Trigger: AATTCGTGGCATTCTTGATGACCTACAGCTGGATTCTACAGCTCACACTGCAAAGCAAGATACTGTAGAGTTACAGAACCAGAAGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp AGACAAAATCATCTTCATATGAAACACCACTTAGAGGAGTTGCGGTaGCATTCAAAGGCCGTGATGTTGATGTTCCTCTGTCCAACTTGT +
Preference number: 5 (lower is better)
Translates to: RQNHLHMKHHLEELR*HSKAVMLMFLCPTC
Trigger: ACAAGTTGGACAGAGGAACATCAACATCACGGCCTTTGAATGCCACCGCAACTCCTCTAAGTGGTGTTTCATATGAAGATGATTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTTGGCTGGAACTGAAATaGGAAGGTGCACCATGGATT +
Preference number: 5 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTWLELK*EGAPWI
Trigger: AATCCATGGTGCACCTTCCAATTTCAGTTCCAGCCA...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTATTAGTCGTAACGCTTTaGGATCAGTATCATGGGCCA +
Preference number: 5 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVLVVTL*DQYHGP
Trigger: TGGCCCATGATACTGATCCAAAAGCGTTACGACTAA...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TTCTCATTTTCCTTACAAGATGGAACTGAAGGACTTTCTTGGCGGCTGCTACCAAATACTTCTGATGCTTaGAGTCAAGGGTCCCTTCTT +
Preference number: 5 (lower is better)
Translates to: FSFSLQDGTEGLSWRLLPNTSDA*SQGSLL
Trigger: AAGAAGGGACCCTTGACTCAAAGCATCAGAAGTATT...TGGTAGCAGCCGCCAAGAAAGTCCTTCAGTTCCATCTTGTAAGGAAAATGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAACCCTCTGTATCATTTaGCTCTTGATTATAGCACTG +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRTLCII*LLIIAL
Trigger: CAGTGCTATAATCAAGAGCAAAATGATACAGAGGGT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TCAAGAAGGCAGGGTACTGAGGTCCCAGGAGAGCATCTCTTATGCTCTAATGTATTTCATCAAGGTTATTaGGATTTTTCACTCGTCGGA +
Preference number: 5 (lower is better)
Translates to: SRRQGTEVPGEHLLCSNVFHQGY*DFSLVG
Trigger: TCCGACGAGTGAAAAATCCAAATAACCTTGATGAAA...TACATTAGAGCATAAGAGATGCTCTCCTGGGACCTCAGTACCCTGCCTTCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGATTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRFCQSV*WFGSFL
Trigger: TAAAAAGGAGCCAAACCACAAAACAGATTGGCAGAA...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTAGCCTGACAGTCCACTaGGTGCTGCTCAACTACAAT +
Preference number: 5 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHISLTVH*VLLNYN
Trigger: ATTGTAGTTGAGCAGCACCAAGTGGACTGTCAGGCT...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATGGGAGTTGAAGGTTaGCAGGCCAAAATGAATTAT +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRMGVEG*QAKMNY
Trigger: ATAATTCATTTTGGCCTGCAAACCTTCAACTCCCAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GGTTTGCAGGCCAAAATGAATTATTTCCACTTTGCCATGCCTGGATGCCTGAGAATTCTTCTAGATTACTaGAAGAGGGACAGGACTGAT +
Preference number: 5 (lower is better)
Translates to: GLQAKMNYFHFAMPGCLRILLDY*KRDRTD
Trigger: ATCAGTCCTGTCCCTCTTCAAGTAATCTAGAAGAAT...TCTCAGGCATCCAGGCATGGCAAAGTGGAAATAATTCATTTTGGCCTGCAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGCAGTGCTTTCCTTATTaGTCAAGAGCTATCATACCA +
Preference number: 5 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQQCFPY*SRAIIP
Trigger: TGGTATGATAGCTCTTGACAAATAAGGAAAGCACTG...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGCAGTGCTTTCCTTATTaGTCAAGAGCTATCATACCA +
Preference number: 5 (lower is better)
Translates to: VGLHCATLPTENNPLIQWQCFPY*SRAIIP
Trigger: TGGTATGATAGCTCTTGACAAATAAGGAAAGCACTG...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GAGTCTGTCAGGACAGCTACTGCCACATTCTTGGCAGCATTTCTTACCAGATTGGCTACAGAAATTCTTTaGCGAGTACACACTTTATTC +
Preference number: 5 (lower is better)
Translates to: ESVRTATATFLAAFLTRLATEIL*RVHTLF
Trigger: GAATAAAGTGTGTACTCGCAAAAGAATTTCTGTAGC...CAATCTGGTAAGAAATGCTGCCAAGAATGTGGCAGTAGCTGTCCTGACAGACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp AAATCTTTAACAGAAAGTTTGCTGCTGGTCCCAGATTTCTTTCCTTaGTGGGAGCCACGTTCTGCTTTTTCCTCATCAAGAAGTGAGTTC +
Preference number: 5 (lower is better)
Translates to: KSLTESLLLVPDFFP*WEPRSAFSSSRSEF
Trigger: GAACTCACTTCTTGATGAGGAAAAAGCAGAACGTGGCTCCCATCAAGGAAAGAAATCTGGGACCAGCAGCAAACTTTCTGTTAAAGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp TTGTTTTCCTTTGAAGAAATCTGTGAATCCACTGAAGACTGCTGGTaGACATGGGCTTCAAGTACCCCAGAAATGTCCTGTACATTGTCT +
Preference number: 5 (lower is better)
Translates to: LFSFEEICESTEDCW*TWASSTPEMSCTLS
Trigger: AGACAATGTACAGGACATTTCTGGGGTACTTGAAGCCCATGTTCACCAGCAGTCTTCAGTGGATTCACAGATTTCTTCAAAGGAAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS GCA 90 bp TATCTCCTCCTGCTGTTTAAGAATCAGCTGTCTTTCCTTCCGAGCTaGCTTATTGGCTTCTTGAAGACGTTTTATTTCTGCCTTTTCTTG +
Preference number: 5 (lower is better)
Translates to: YLLLLFKNQLSFLPS*LIGFLKTFYFCLFL
Trigger: CAAGAAAAGGCAGAAATAAAACGTCTTCAAGAAGCCAATAAGGCAGCTCGGAAGGAAAGACAGCTGATTCTTAAACAGCAGGAGGAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp TTCCCATGGTCCTTTGCTTTGTGTACCACCTATGTGCCCAAAAAGTaGCAAGAATTTTTCAGCTTCTTTCTGAAACTCTTTGATGGGTTC +
Preference number: 5 (lower is better)
Translates to: FPWSFALCTTYVPKK*QEFFSFFLKLFDGF
Trigger: GAACCCATCAAAGAGTTTCAGAAAGAAGCTGAAAAATTCTTGCCACTTTTTGGGCACATAGGTGGTACACAAAGCAAAGGACCATGGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp TCTTCTGCAGTATGGGGGACTGCCAATAATGTTTCACATGGTTGTTaGGTTACTCTTTTAGGTTCTGCCATTAGAGGTACAATGGTTTCT +
Preference number: 5 (lower is better)
Translates to: SSAVWGTANNVSHGC*VTLLGSAIRGTMVS
Trigger: AGAAACCATTGTACCTCTAATGGCAGAACCTAAAAGAGTAACCCAACAACCATGTGAAACATTATTGGCAGTCCCCCATACTGCAGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTACTGGAAGATGCACTaGGGGGACGTTCCTGTACTT +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLYWKMH*GDVPVL
Trigger: AAGTACAGGAACGTCCCCCAAGTGCATCTTCCAGTA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGATAGGCAGGTGACATaGTCCTCCAGTCCTATGACT +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLDRQVT*SSSPMT
Trigger: AGTCATAGGACTGGAGGACAATGTCACCTGCCTATC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCGATCAGACTGGCTTCTaGGGCTTTCAGTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSDQTGF*GFQSFL
Trigger: AAGGAAAGACTGAAAGCCCAAGAAGCCAGTCTGATC...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp GTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTAATCCAGTGGTTCCTTTGTGTTCTTTaGTTCGTGAATGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: VGLHCATLPTENNPLIQWFLCVL*FVNVFS
Trigger: GGAAAAGACATTCACGAACAAAAGAACACAAAGGAA...CCACTGGATTAATGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCAAACTAGTCTCACCTTaGAATCGAAGAATTCCTGGC +
Preference number: 5 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFKLVSP*NRRIPG
Trigger: GCCAGGAATTCTTCGATTCAAAGGTGAGACTAGTTT...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTAGCTTCAGCATATAGGTaGTCTTCCTCTTCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELASAYR*SSSSVN
Trigger: GTTTACAGAAGAGGAAGACAACCTATATGCTGAAGC...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CAAGTAACAGCATCTCTGACTTCTTGGGGAAAGATGGGAGTTGAAGGTTTGCAGAGTTGGCAGACATTATaGAGCTTGCCTATTTTAGAA +
Preference number: 5 (lower is better)
Translates to: QVTASLTSWGKMGVEGLQSWQTL*SLPILE
Trigger: TTCTAAAATAGGCAAGCTCAATAATGTCTGCCAACT...CTGCAAACCTTCAACTCCCATCTTTCCCCAAGAAGTCAGAGATGCTGTTACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTACTCCAGAATGTGAAGTaGGCAGACATTATTGAGCTT +
Preference number: 5 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVLQNVK*ADIIEL
Trigger: AAGCTCAATAATGTCTGCCAACTTCACATTCTGGAG...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 90 bp TCTTCTCTGATTTTCCTTGATGATCTGAGAACTGGAGATGGGGTCTaGAAATCTTCTGTTCGACTGTCCCATTCATTTACTCTCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SSLIFLDDLRTGDGV*KSSVRLSHSFTLFA
Trigger: TGCAAAGAGAGTAAATGAATGGGACAGTCGAACAGAAGATTTTCAGACCCCATCTCCAGTTCTCAGATCATCAAGGAAAATCAGAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS TCA 90 bp GCAAGATGTCACACAAGTAGCATTCTCCCCTGCTTTTCACTGATCTaGTTCAGAACATCAATAGTATCTTTGATCAGGGTCTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: ARCHTSSILPCFSLI*FRTSIVSLIRVSKI
Trigger: GATCTTTGAGACCCTGATCAAAGATACTATTGATGTTCTGAATCAGATCAGTGAAAAGCAGGGGAGAATGCTACTTGTGTGACATCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CCA 90 bp TCTTCTGCTGCATTATGTACAAGAATCTCTACTTCTTCTGCAGTATaGGGGACTGCCAATAATGTTTCACATGGTTGTTGGGTTACTCTT +
Preference number: 5 (lower is better)
Translates to: SSAALCTRISTSSAV*GTANNVSHGCWVTL
Trigger: AAGAGTAACCCAACAACCATGTGAAACATTATTGGCAGTCCCCCATACTGCAGAAGAAGTAGAGATTCTTGTACATAATGCAGCAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATTCTCTACTCATGTTTaGAAACTCAGCCTCCTGCCA +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLFSTHV*KLSLLP
Trigger: TGGCAGGAGGCTGAGTTTCAAAACATGAGTAGAGAA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTTCCTGCGTAACATGTaGATGAGATGGCTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTFLRNM*MRWLFK
Trigger: CTTGAAGAGCCATCTCATCAACATGTTACGCAGGAA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTTGAGAATGGTGAACTaGTGGGCTCAATCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTLRMVN*WAQSFR
Trigger: CCTGAAAGATTGAGCCCACAAGTTCACCATTCTCAA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAGTTCCTCTGTCCAACTaGTCTTCAAACCCTTTTCCA +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLVPLSN*SSNPFP
Trigger: TGGAAAAGGGTTTGAAGACAAGTTGGACAGAGGAAC...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCTTCATGGCGTTGCTGTaGTGCCTTTATTATCTGAGC +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTFMALL*CLYYLS
Trigger: GCTCAGATAATAAAGGCACAACAGCAACGCCATGAA...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCATTTTTGCTCCCGCTTaGTCAGAAACTTTTCATCCA +
Preference number: 5 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFIFAPA*SETFHP
Trigger: TGGATGAAAAGTTTCTGACAAAGCGGGAGCAAAAAT...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCCAGGCAGCCAAAGCTaGTTTTTCCATTTGACGAAT +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSPGSQS*FFHLTN
Trigger: ATTCGTCAAATGGAAAAACAAGCTTTGGCTGCCTGG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACCAGGCAGCCAAAGCTaGTTTTTCCATTTGACGAAT +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLPGSQS*FFHLTN
Trigger: ATTCGTCAAATGGAAAAACAAGCTTTGGCTGCCTGG...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AAAAGTTATGAGTCTCTAATGCTGTGCTACAGAAATTCTTTTGCGAGTACACACAGGGGATTCAGTAACTaGCTGTTCATGCTCCACATC +
Preference number: 5 (lower is better)
Translates to: KSYESLMLCYRNSFASTHRGFSN*LFMLHI
Trigger: GATGTGGAGCATGAACAGCAAGTTACTGAATCCCCT...GTGTGTACTCGCAAAAGAATTTCTGTAGCACAGCATTAGAGACTCATAACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTAGGGGATTCAGTAACTaGCTGTTCATGCTCCACATC +
Preference number: 5 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSRGFSN*LFMLHI
Trigger: GATGTGGAGCATGAACAGCAAGTTACTGAATCCCCT...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAGCAACCTGAAATACTaGGCGACTGTTCCTCAACAT +
Preference number: 5 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVSNLKY*ATVPQH
Trigger: ATGTTGAGGAACAGTCGCCAAGTATTTCAGGTTGCT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAAGCAACCTGAAATACTaGGCGACTGTTCCTCAACAT +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLSNLKY*ATVPQH
Trigger: ATGTTGAGGAACAGTCGCCAAGTATTTCAGGTTGCT...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp TTAGCAAAAGGTGTAGGATTACACTGTGCAACCCTGCCCACTGAAAATAACCCATTTCATCAAGGTTATTaGGATTTTTCACTCGTCGGA +
Preference number: 5 (lower is better)
Translates to: LAKGVGLHCATLPTENNPFHQGY*DFSLVG
Trigger: TCCGACGAGTGAAAAATCCAAATAACCTTGATGAAA...TGGGTTATTTTCAGTGGGCAGGGTTGCACAGTGTAATCCTACACCTTTTGCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAACCAGGTGTACCACATaGTCCTATGAACTCCATACT +
Preference number: 5 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQTRCTT*SYELHT
Trigger: AGTATGGAGTTCATAGGACAATGTGGTACACCTGGT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAAGTAGGGGCATTTCTTaGTTTTCATGCCCACACAGA +
Preference number: 5 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQSRGIS*FSCPHR
Trigger: TCTGTGTGGGCATGAAAACAAAGAAATGCCCCTACT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS GCA 90 bp GAAGCTTCAGCATATAGGTTGTCTTCCTCTTCTGTAAACTGCTGTTaGTTCTCCAATTCTTCGGAAAAGGTATTGTCTAAAGTGTCATCT +
Preference number: 5 (lower is better)
Translates to: EASAYRLSSSSVNCC*FSNSSEKVLSKVSS
Trigger: AGATGACACTTTAGACAATACCTTTTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGAAGACAACCTATATGCTGAAGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS-3UTR CAA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCAACAGTATCCTTGCTTaGAGAGTTCCTTGGATTTGG +
Preference number: 5 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVNSILA*RVPWIW
Trigger: CCAAATCCAAGGAACTCTCAAAGCAAGGATACTGTT...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATATTGGTCTCTGAAGGGTaGAAACCTTTATATGCTGGA +
Preference number: 5 (lower is better)
Translates to: RDPITTFQCFPYLSRAIILVSEG*KPLYAG
Trigger: TCCAGCATATAAAGGTTTCAACCCTTCAGAGACCAA...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTTCCACCTCTGTCACTaGATGCTGTTCTTTGCTCTT +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLFHLCH*MLFFAL
Trigger: AAGAGCAAAGAACAGCATCAAGTGACAGAGGTGGAA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCACAAAGAAGCAGCTGTaGCTTTCAAGGCTTCAATAC +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSTKKQL*LSRLQY
Trigger: GTATTGAAGCCTTGAAAGCAACAGCTGCTTCTTTGT...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGCCCCAGCTAATTTCTaGGCTTCACTTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLAPANF*ASLSIL
Trigger: CAGAATTGAAAGTGAAGCCAAGAAATTAGCTGGGGC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCGTCTCTTTCATGGCGTaGCTGTTGTGCCTTTATTAT +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTVSFMA*LLCLYY
Trigger: ATAATAAAGGCACAACAGCAACGCCATGAAAGAGAC...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCGTGGCATTTAATTCTTaGAGAAGATGTAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFVAFNS*RRCNAG
Trigger: ACCTGCATTACATCTTCTCAAAGAATTAAATGCCAC...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGACTAGATTCTCCAACCTaGCCATCTGACATATCAAGA +
Preference number: 5 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGLDSPT*PSDISR
Trigger: TCTTGATATGTCAGATGGCAAGGTTGGAGAATCTAG...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCTAGATTCTCCAACCTaGCCATCTGACATATCAAGA +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTLDSPT*PSDISR
Trigger: TCTTGATATGTCAGATGGCAAGGTTGGAGAATCTAG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CTGTGTAGACCTGAAGAGGGAATCTATACCCTGTACTTGTTTAACCCAGAGTTATTCCTTTGTGTTCTTTaGTTCGTGAATGTCTTTTCC +
Preference number: 5 (lower is better)
Translates to: LCRPEEGIYTLYLFNPELFLCVL*FVNVFS
Trigger: GGAAAAGACATTCACGAACAAAAGAACACAAAGGAA...TAACTCTGGGTTAAACAAGTACAGGGTATAGATTCCCTCTTCAGGTCTACACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGCTTCAGCATATAGGTaGTCTTCCTCTTCTGTAAAC +
Preference number: 5 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIASAYR*SSSSVN
Trigger: GTTTACAGAAGAGGAAGACAACCTATATGCTGAAGC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGGGGTGTTACTTTCTTTaGGTCATCACCAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLGCYFL*VITKKL
Trigger: GAGCTTCTTGGTGATGACCAAAAGAAAGTAACACCC...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGGGGTGTTACTTTCTTTaGGTCATCACCAAGAAGCTC +
Preference number: 5 (lower is better)
Translates to: FSAFLICQELSYQSLCKMGCYFL*VITKKL
Trigger: GAGCTTCTTGGTGATGACCAAAAGAAAGTAACACCC...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACTATACCTCTCTCACTaGACTTCAGACTCAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLLYLSH*TSDSKK
Trigger: CTTCTTTGAGTCTGAAGTCAAGTGAGAGAGGTATAG...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTAAGAATAAGTACAAGGTCCAGAAGCACTCTTGCTATGATGGCGATGGGTGTAAGTTGGCAGACATTATaGAGCTTGCCTATTTTAGAA +
Preference number: 5 (lower is better)
Translates to: LRISTRSRSTLAMMAMGVSWQTL*SLPILE
Trigger: TTCTAAAATAGGCAAGCTCAATAATGTCTGCCAACT...TACACCCATCGCCATCATAGCAAGAGTGCTTCTGGACCTTGTACTTATTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCTCCAGAATGTGAAGTaGGCAGACATTATTGAGCTT +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSLQNVK*ADIIEL
Trigger: AAGCTCAATAATGTCTGCCAACTTCACATTCTGGAG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AAATCATTTTATCCCACTGCTGCTATTGCAGGTGATCTGGAAAAGCCCATCTTCATAGACAATATCTTTTaGTCTTTGGTGCACACACTC +
Preference number: 5 (lower is better)
Translates to: KSFYPTAAIAGDLEKPIFIDNIF*SLVHTL
Trigger: GAGTGTGTGCACCAAAGACAAAAAGATATTGTCTAT...GAAGATGGGCTTTTCCAGATCACCTGCAATAGCAGCAGTGGGATAAAATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 90 bp TTATTTTCAGACCGAGATTTACTTCTCGAACGTTCTGAGTTTCTTTaGAGATGTCTATGTAAAACGTCCAACCTGGGATCAGATTCTGCT +
Preference number: 5 (lower is better)
Translates to: LFSDRDLLLERSEFL*RCLCKTSNLGSDSA
Trigger: AGCAGAATCTGATCCCAGGTTGGACGTTTTACATAGACATCTTCAAAGAAACTCAGAACGTTCGAGAAGTAAATCTCGGTCTGAAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 90 bp CCTTTAGCAAAACTAGTCTCACCTTTGAATCGAAGAATTCCTGGCTaGACATTTCCAATCAACACCCTATCACCAATGTGGAAATCAAAT +
Preference number: 5 (lower is better)
Translates to: PLAKLVSPLNRRIPG*TFPINTLSPMWKSN
Trigger: ATTTGATTTCCACATTGGTGATAGGGTGTTGATTGGAAATGTTCAGCCAGGAATTCTTCGATTCAAAGGTGAGACTAGTTTTGCTAAAGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS GCA 90 bp ATAGGATTTTGTAAAAATATTAATGACGCTATGTGGACTTCCCTTTaGCAATTCTTCCCATGGTCCTTTGCTTTGTGTACCACCTATGTG +
Preference number: 5 (lower is better)
Translates to: IGFCKNINDAMWTSL*QFFPWSFALCTTYV
Trigger: CACATAGGTGGTACACAAAGCAAAGGACCATGGGAAGAATTGGCAAAGGGAAGTCCACATAGCGTCATTAATATTTTTACAAAATCCTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 90 bp TTTTCTGAAGCTTCAGCATATAGGTTGTCTTCCTCTTCTGTAAACTaGTGTTGCTTCTCCAATTCTTCGGAAAAGGTATTGTCTAAAGTG +
Preference number: 5 (lower is better)
Translates to: FSEASAYRLSSSSVN*CCFSNSSEKVLSKV
Trigger: CACTTTAGACAATACCTTTTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGAAGACAACCTATATGCTGAAGCTTCAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CCA 90 bp CGATCATTTAAAAACCTAACAACTGTATCATTGATGACAGATGATTaGGAGCTCTCAAAATCACAGCTCCGTATATTCCGTTCTTCTCGA +
Preference number: 5 (lower is better)
Translates to: RSFKNLTTVSLMTDD*ELSKSQLRIFRSSR
Trigger: TCGAGAAGAACGGAATATACGGAGCTGTGATTTTGAGAGCTCCCAATCATCTGTCATCAATGATACAGTTGTTAGGTTTTTAAATGATCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS CCA 90 bp TCCAGTTTGACATCATGTTGTCGCCGCTTTAGAATATCTAATCTTTaGGAATTAGAAGTACTAGTAGAGGATGGAGAAGAGTCAGTTAGT +
Preference number: 5 (lower is better)
Translates to: SSLTSCCRRFRISNL*ELEVLVEDGEESVS
Trigger: ACTAACTGACTCTTCTCCATCCTCTACTAGTACTTCTAATTCCCAAAGATTAGATATTCTAAAGCGGCGACAACATGATGTCAAACTGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 90 bp AAATCCTTTAGCAAAACTAGTCTCACCTTTGAATCGAAGAATTCCTaGCTGAACATTTCCAATCAACACCCTATCACCAATGTGGAAATC +
Preference number: 5 (lower is better)
Translates to: KSFSKTSLTFESKNS*LNISNQHPITNVEI
Trigger: GATTTCCACATTGGTGATAGGGTGTTGATTGGAAATGTTCAGCCAGGAATTCTTCGATTCAAAGGTGAGACTAGTTTTGCTAAAGGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS CCA 90 bp GTAGGAGAAGCATGTGTTTGCTGTTACACAACAAGGACCAATGGGTaGAAATTAAAAGGACAGAAATTTTGGCTAAATACAACAAAGAGC +
Preference number: 5 (lower is better)
Translates to: VGEACVCCYTTRTNG*KLKGQKFWLNTTKS
Trigger: GCTCTTTGTTGTATTTAGCCAAAATTTCTGTCCTTTTAATTTCCACCCATTGGTCCTTGTTGTGTAACAGCAAACACATGCTTCTCCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484356.5
ENST00000490141.5
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCCTTGTAGAAGACTTCTaGGTATCCATGACAGAATCA +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTLVEDF*VSMTES
Trigger: TGATTCTGTCATGGATACCAAGAAGTCTTCTACAAG...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAATGTGGTTATATCTGCTaGAACAGTATCCTTGCTTTG +
Preference number: 5 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQCGYIC*NSILAL
Trigger: CAAAGCAAGGATACTGTTCAAGCAGATATAACCACA...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACTAACAACTGTATCATaGATGACAGATGATTGGGAG +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLLTTVS*MTDDWE
Trigger: CTCCCAATCATCTGTCATCAATGATACAGTTGTTAG...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATATATTTTGGCTTTGTCTaGAGAACAGGCTTGCATATC +
Preference number: 5 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIYFGFV*RTGLHI
Trigger: GATATGCAAGCCTGTTCTCAAGACAAAGCCAAAATA...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATGCCTTATTGGCTTCTaGAAGACGTTTTATTTCTGC +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLCLIGF*KTFYFC
Trigger: GCAGAAATAAAACGTCTTCAAGAAGCCAATAAGGCA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTGTGATTTCCAATTCTTaGCCGTTTCAGATCTGTGTA +
Preference number: 5 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIVISNS*PFQICV
Trigger: TACACAGATCTGAAACGGCAAAGAATTGGAAATCAC...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAACCCTCTGTATCATTTaGCTCTTGATTATAGCACTG +
Preference number: 5 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQTLCII*LLIIAL
Trigger: CAGTGCTATAATCAAGAGCAAAATGATACAGAGGGT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CTGTACTTGTTTAACCCAGAGTTAACTACCCTGGATAGCACAAATTGTTTTGGATTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: LYLFNPELTTLDSTNCFGFCQSV*WFGSFL
Trigger: TAAAAAGGAGCCAAACCACAAAACAGATTGGCAGAA...TCCAAAACAATTTGTGCTATCCAGGGTAGTTAACTCTGGGTTAAACAAGTACAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTTTTA +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLFCQSV*WFGSFL
Trigger: TAAAAAGGAGCCAAACCACAAAACAGATTGGCAGAA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp ACCAGGACCTTCAATATTAAGGCATTTACATTCACGCCTAAGAGTATCCACATTCAGCGTTCGATTTATTaGCAAGATGTCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: TRTFNIKAFTFTPKSIHIQRSIY*QDVTQV
Trigger: TACTTGTGTGACATCTTGCAAATAAATCGAACGCTG...AATGTGGATACTCTTAGGCGTGAATGTAAATGCCTTAATATTGAAGGTCCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTACCAGGTGTACCACATaGTCCTATGAACTCCATACT +
Preference number: 5 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLTRCTT*SYELHT
Trigger: AGTATGGAGTTCATAGGACAATGTGGTACACCTGGT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCATGGGAGTTGAAGGTTaGCAGGCCAAAATGAATTAT +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTMGVEG*QAKMNY
Trigger: ATAATTCATTTTGGCCTGCAAACCTTCAACTCCCAT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAATTCTTCTAGATTACTaGAAGAGGGACAGGACTGAT +
Preference number: 5 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIILLDY*KRDRTD
Trigger: ATCAGTCCTGTCCCTCTTCAAGTAATCTAGAAGAAT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATAAATCCAGTAGATGTCTaGTATCATGCTTCTAACCAG +
Preference number: 5 (lower is better)
Translates to: RDPITTFQCFPYLSRAIINPVDV*YHASNQ
Trigger: CTGGTTAGAAGCATGATACAAGACATCTACTGGATT...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACAGTGCTTTCCTTATTaGTCAAGAGCTATCATACCA +
Preference number: 5 (lower is better)
Translates to: RDPITTFQCFPYLSRAIIQCFPY*SRAIIP
Trigger: TGGTATGATAGCTCTTGACAAATAAGGAAAGCACTG...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp TTACAGATCGTACTTACAAACCACACCCTTAAGTGTTCGGTGCAAAATTGCACTATCTATACCCTGTACTaGTTTAACCCAGAGTTAACT +
Preference number: 5 (lower is better)
Translates to: LQIVLTNHTLKCSVQNCTIYTLY*FNPELT
Trigger: AGTTAACTCTGGGTTAAACAAGTACAGGGTATAGAT...AGTGCAATTTTGCACCGAACACTTAAGGGTGTGGTTTGTAAGTACGATCTGTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCCAAACATTCAGAATTTaGCAATGCATCAATTGCTGG +
Preference number: 5 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVQTFRI*QCINCW
Trigger: CCAGCAATTGATGCATTGCAAAATTCTGAATGTTTG...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp ACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTACAGCTCAAACTTTTCGTACTGGCTaGACTACTTTCTTCTCTTTA +
Preference number: 5 (lower is better)
Translates to: TFASLSQFAHYGYKTTAQTFRTG*TTFFSL
Trigger: TAAAGAGAAGAAAGTAGTCAAGCCAGTACGAAAAGT...TTGAGCTGTAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCTTAAATTCACTAAGATaGCCTACACCAGGAAGATCA +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSLNSLR*PTPGRS
Trigger: TGATCTTCCTGGTGTAGGCAATCTTAGTGAATTTAA...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTTGGACCAGGACTGGTaGCCTTATTATCCTTTGTAT +
Preference number: 5 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLLDQDW*PYYPLY
Trigger: ATACAAAGGATAATAAGGCAACCAGTCCTGGTCCAA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTATCTTCGGAAAAGGTATaGTCTAAAGTGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLSSEKV*SKVSSS
Trigger: AGAAGATGACACTTTAGACAATACCTTTTCCGAAGA...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CCCAAGAAACCTTTGCTTCTCTTAGTCAATTTGCTCATTATGGCTACAAGACTAACATCAATAGTATCTTaGATCAGGGTCTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: PKKPLLLLVNLLIMATRLTSIVS*IRVSKI
Trigger: GATCTTTGAGACCCTGATCAAAGATACTATTGATGT...TAGTCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAGCAAAGGTTTCTTGGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCACATCAATAGTATCTTaGATCAGGGTCTCAAAGATC +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSTSIVS*IRVSKI
Trigger: GATCTTTGAGACCCTGATCAAAGATACTATTGATGT...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCAGCGTTCGATTTATTaGCAAGATGTCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: FSAFLICQELSYQSLCKMQRSIY*QDVTQV
Trigger: TACTTGTGTGACATCTTGCAAATAAATCGAACGCTG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGCAGCGTTCGATTTATTaGCAAGATGTCACACAAGTA +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLQRSIY*QDVTQV
Trigger: TACTTGTGTGACATCTTGCAAATAAATCGAACGCTG...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp AGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAATATCTTTTTGTCTTaGGTGCACACACTCATTTCC +
Preference number: 5 (lower is better)
Translates to: RPNHNISVLSLFVKSYHTNIFLS*VHTLIS
Trigger: GGAAATGAGTGTGTGCACCAAAGACAAAAAGATATT...GGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGAATCCAGTAGATGTCTaGTATCATGCTTCTAACCAG +
Preference number: 5 (lower is better)
Translates to: FSAFLICQELSYQSLCKMNPVDV*YHASNQ
Trigger: CTGGTTAGAAGCATGATACAAGACATCTACTGGATT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGAATCCAGTAGATGTCTaGTATCATGCTTCTAACCAG +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLNPVDV*YHASNQ
Trigger: CTGGTTAGAAGCATGATACAAGACATCTACTGGATT...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp TATTGGTTTGTTAAAACCACAGGTTCCTGTGCAAAGACTATGAACCATAGAAGCCTTCTCTTAGTCAATTaGCTCATTATGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: YWFVKTTGSCAKTMNHRSLLLVN*LIMATR
Trigger: TCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAG...GCTTCTATGGTTCATAGTCTTTGCACAGGAACCTGTGGTTTTAACAAACCAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CGAGACCCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACTTCTCTTAGTCAATTaGCTCATTATGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: RDPITTFQCFPYLSRAIILLLVN*LIMATR
Trigger: TCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAG...TATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGGGTCTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp CCAATCACAACATTTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCCACTTTATTCAAGTATaGCAAAAAGCTAAGGCCACT +
Preference number: 5 (lower is better)
Translates to: PITTFQCFPYLSRAIIPVHFIQV*QKAKAT
Trigger: AGTGGCCTTAGCTTTTTGCAATACTTGAATAAAGTG...GACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAAATGTTGTGATTGG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGAGCTTGTTTTTCCATTaGACGAATTTCTGCTTCTTC +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLSLFFH*TNFCFF
Trigger: GAAGAAGCAGAAATTCGTCAAATGGAAAAACAAGCT...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTACAGATGTGCAGCTTTaGGGAAGTGAATGTTTACTA +
Preference number: 5 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLTDVQL*GSECLL
Trigger: TAGTAAACATTCACTTCCCAAAAGCTGCACATCTGT...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTCTCTGTGGCATTTAATTCTTaGAGAAGATGTAATGCAGGT +
Preference number: 5 (lower is better)
Translates to: KLVFPHYWLITPRNLCFSVAFNS*RRCNAG
Trigger: ACCTGCATTACATCTTCTCAAAGAATTAAATGCCAC...AGAGAAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp AGGGAAGATGCAGAAATAAACGAACGTGCACACTTAAAGATTATACCATCTTTGTTTCATCAAGGTTATTaGGATTTTTCACTCGTCGGA +
Preference number: 5 (lower is better)
Translates to: REDAEINERAHLKIIPSLFHQGY*DFSLVG
Trigger: TCCGACGAGTGAAAAATCCAAATAACCTTGATGAAA...CAAAGATGGTATAATCTTTAAGTGTGCACGTTCGTTTATTTCTGCATCTTCCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS-3UTR CAA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGAATATCTTTTTGTCTTaGGTGCACACACTCATTTCC +
Preference number: 5 (lower is better)
Translates to: FSAFLICQELSYQSLCKMNIFLS*VHTLIS
Trigger: GGAAATGAGTGTGTGCACCAAAGACAAAAAGATATT...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS-3UTR CAA 90 bp TTCAGTGCTTTCCTTATTTGTCAAGAGCTATCATACCAGTCATTGTGCAAAATGCTTCTCTTAGTCAATTaGCTCATTATGGCTACAAGA +
Preference number: 5 (lower is better)
Translates to: FSAFLICQELSYQSLCKMLLLVN*LIMATR
Trigger: TCTTGTAGCCATAATGAGCAAATTGACTAAGAGAAG...CATTTTGCACAATGACTGGTATGATAGCTCTTGACAAATAAGGAAAGCACTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS GCA 90 bp TCAGTTCTCATAGAAGCTCCCATCCTAATCAAACATTCAGAATTTTaGAATGCATCAATTGCTGGTCGATCATTTAAAAACCTAACAACT +
Preference number: 5 (lower is better)
Translates to: SVLIEAPILIKHSEF*NASIAGRSFKNLTT
Trigger: AGTTGTTAGGTTTTTAAATGATCGACCAGCAATTGATGCATTGCAAAATTCTGAATGTTTGATTAGGATGGGAGCTTCTATGAGAACTGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS-3UTR CAA 90 bp CATAAAACTAGTATTTCCACACTACTGGTTAATAACCCCAAGAAACCTTTGCTTTCTTCGGAAAAGGTATaGTCTAAAGTGTCATCTTCT +
Preference number: 5 (lower is better)
Translates to: HKTSISTLLVNNPKKPLLSSEKV*SKVSSS
Trigger: AGAAGATGACACTTTAGACAATACCTTTTCCGAAGA...AAGCAAAGGTTTCTTGGGGTTATTAACCAGTAGTGTGGAAATACTAGTTTTATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
CDS GCA 72 bp GCTACCACGGTGCATCCCGCGGAGCCTGGCGGAGGGTaGAGTGACGCCGCCCCGACCGGCCCCAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: ATTVHPAEPGGG*SDAAPTGPRAA
Trigger: GGCAGCCCTGGGGCCGGTCGGGGCGGCGTCACTGCACCCTCCGCCAGGCTCCGCGGGATGCACCGTGGTAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS CCA 72 bp AGCTGCGGCTCCCTGCAGTTCTCTCTGGCGCAGGTCTaGCCCCGCTCCCCGGCCCGGGAGTCACTTCGTCAG +
Preference number: 6 (lower is better)
Translates to: SCGSLQFSLAQV*PRSPARESLRQ
Trigger: CTGACGAAGTGACTCCCGGGCCGGGGAGCGGGGCCAGACCTGCGCCAGAGAGAACTGCAGGGAGCCGCAGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS CCA 72 bp CCTCCTCGCACCGGCTCCGGGGATCCGCCGGTCCGCTaGGAAGGAAGACAAGGCGGAAAGGCTGCCTCCCCT +
Preference number: 6 (lower is better)
Translates to: PPRTGSGDPPVR*EGRQGGKAASP
Trigger: AGGGGAGGCAGCCTTTCCGCCTTGTCTTCCTTCCCAGCGGACCGGCGGATCCCCGGAGCCGGTGCGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS TCA 72 bp GTTGGCGCACCGACTCCTCAATGGCGTTCAGATAACTaGGTTCTGCTGCCATACGATGATGGAGGCCAGCAG +
Preference number: 6 (lower is better)
Translates to: VGAPTPQWRSDN*VLLPYDDGGQQ
Trigger: CTGCTGGCCTCCATCATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCATTGAGGAGTCGGTGCGCCAAC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp AGTCTGGAAGGTGCTGCCGTTGGTGGTCATACAGTATaGCAAGGGGAGCTCCTGAAGCCACGACAGCATCTG +
Preference number: 6 (lower is better)
Translates to: SLEGAAVGGHTV*QGELLKPRQHL
Trigger: CAGATGCTGTCGTGGCTTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS TCA 72 bp GCTGCGTCTGTGGTGAGGCGAGCAGTTTCTGACTGCTaGGCTGCTATTTTACACGTTGCTTCCTGCAGGACT +
Preference number: 6 (lower is better)
Translates to: AASVVRRAVSDC*AAILHVASCRT
Trigger: AGTCCTGCAGGAAGCAACGTGTAAAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTCACCACAGACGCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000418229.5
ENST00000490047.1
CDS TCA 72 bp TTGACGTGCTGCGTCTGTGGTGAGGCGAGCAGTTTCTaGCTGCTGAGCTGCTATTTTACACGTTGCTTCCTG +
Preference number: 6 (lower is better)
Translates to: LTCCVCGEASSF*LLSCYFTRCFL
Trigger: CAGGAAGCAACGTGTAAAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTCACCACAGACGCAGCACGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000418229.5
ENST00000490047.1
CDS TCA 72 bp CTGCCATCTCACAGATTTGACGTGCTGCGTCTGTGGTaGGGCGAGCAGTTTCTGACTGCTGAGCTGCTATTT +
Preference number: 6 (lower is better)
Translates to: LPSHRFDVLRLW*GEQFLTAELLF
Trigger: AAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTCACCACAGACGCAGCACGTCAAATCTGTGAGATGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS GCA 72 bp CGACTCCTCAATGGCGTTCAGATAACTGAGTTCTGCTaGCATACGATGATGGAGGCCAGCAGGAGAAAAGCG +
Preference number: 6 (lower is better)
Translates to: RLLNGVQITEFC*HTMMEASRRKA
Trigger: CGCTTTTCTCCTGCTGGCCTCCATCATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCATTGAGGAGTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp AGCTGTTTCACAAAGTCTGGAAGGTGCTGCCGTTGGTaGTCATACAGTATTGCAAGGGGAGCTCCTGAAGCC +
Preference number: 6 (lower is better)
Translates to: SCFTKSGRCCRW*SYSIARGAPEA
Trigger: GGCTTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS CAA 90 bp GTTTCACAAAGTCTGGAAGGTGCTGCCGTTGGTGGTCATACAGTATaGCAAGGGGAGCTCCTGAAGCCACGACAGCATCTGAGATATGAG +
Preference number: 6 (lower is better)
Translates to: VSQSLEGAAVGGHTV*QGELLKPRQHLRYE
Trigger: CTCATATCTCAGATGCTGTCGTGGCTTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS GCA 72 bp TATTGGAGCCATGTTCTCTGTCGTTGTTCTGCTGGCTaGCGGGTTCAGATCAGTGAGAGGTGCATTAGGCTT +
Preference number: 6 (lower is better)
Translates to: YWSHVLCRCSAG*RVQISERCIRL
Trigger: AAGCCTAATGCACCTCTCACTGATCTGAACCCGGCAGCCAGCAGAACAACGACAGAGAACATGGCTCCAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 72 bp CACCGACTCCTCAATGGCGTTCAGATAACTGAGTTCTaGTGCCATACGATGATGGAGGCCAGCAGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: HRLLNGVQITEF*CHTMMEASRRK
Trigger: TTTTCTCCTGCTGGCCTCCATCATCGTATGGCAGCAGAACTCAGTTATCTGAACGCCATTGAGGAGTCGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp GAGGCTGTGGAGGTTCTGAGAGAGACATGTCACTACTaGAAGATGCACTTGGGGGACGTTCCTGTACTTTGT +
Preference number: 6 (lower is better)
Translates to: EAVEVLRETCHY*KMHLGDVPVLC
Trigger: ACAAAGTACAGGAACGTCCCCCAAGTGCATCTTCCAGTAGTGACATGTCTCTCTCAGAACCTCCACAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp CTCAGCTGTTTCACAAAGTCTGGAAGGTGCTGCCGTTaGTGGTCATACAGTATTGCAAGGGGAGCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: LSCFTKSGRCCR*WSYSIARGAPE
Trigger: TTCAGGAGCTCCCCTTGCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS CAA 72 bp AGGTGGAGTTACAGCCTTGGTCCAAGGTCCATCTTCTaGAGGTGCCTGCTGCACATCATACTCAGTGTTCCA +
Preference number: 6 (lower is better)
Translates to: RWSYSLGPRSIF*RCLLHIILSVP
Trigger: TGGAACACTGAGTATGATGTGCAGCAGGCACCTCAAGAAGATGGACCTTGGACCAAGGCTGTAACTCCACCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp GAAGAGCTCAAACCAAAGTCTTCATCAAACCAGTCTTaGTCATCTCCTAACGCGCTCAGGAACTCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: EELKPKSSSNQS*SSPNALRNSRL
Trigger: CAGCCGGGAGTTCCTGAGCGCGTTAGGAGATGATCAAGACTGGTTTGATGAAGACTTTGGTTTGAGCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS TCA 72 bp ACTTTTCCTCACAGATTTGACGTGCTGCGTCTGTGGTaGGGCGAGCAGTTTCTGACTGCTGAGCTGCTATTT +
Preference number: 6 (lower is better)
Translates to: TFPHRFDVLRLW*GEQFLTAELLF
Trigger: AAATAGCAGCTCAGCAGTCAGAAACTGCTCGCCTCACCACAGACGCAGCACGTCAAATCTGTGAGGAAAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490047.1
CDS TCA 72 bp CTGCCCACTGGCACCAAATACTGGGCTCTCCTCTGGTaGCCATCTGGCTCAAGTTACTCAAAGTCATTACTT +
Preference number: 6 (lower is better)
Translates to: LPTGTKYWALLW*PSGSSYSKSLL
Trigger: AAGTAATGACTTTGAGTAACTTGAGCCAGATGGTCACCAGAGGAGAGCCCAGTATTTGGTGCCAGTGGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000496440.1
CDS CAA 90 bp GAGTCAGTCTGCCTTTTACATAACTGTGCCAGTAGCCCTTCTGGTTaGGGACCAGGGGATCTCACTCTAAAGCTTGATATGGCACTCTGT +
Preference number: 6 (lower is better)
Translates to: ESVCLLHNCASSPSG*GPGDLTLKLDMALC
Trigger: ACAGAGTGCCATATCAAGCTTTAGAGTGAGATCCCCTGGTCCCAAACCAGAAGGGCTACTGGCACAGTTATGTAAAAGGCAGACTGACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp AAGGCCTTTTCACGGAGACGCAGGAGTGAAGACTGGTaGGCTGCCCTCATTTCTTCCTCTTTCATATACTGT +
Preference number: 6 (lower is better)
Translates to: KAFSRRRRSEDW*AALISSSFIYC
Trigger: ACAGTATATGAAAGAGGAAGAAATGAGGGCAGCTCACCAGTCTTCACTCCTGCGTCTCCGTGAAAAGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 72 bp TGTTCTGCTGGCTGCCGGGTTCAGATCAGTGAGAGGTaGATTAGGCTTAAATCCTGTTATAGTTGGAGGCAT +
Preference number: 6 (lower is better)
Translates to: CSAGCRVQISER*IRLKSCYSWRH
Trigger: ATGCCTCCAACTATAACAGGATTTAAGCCTAATGCACCTCTCACTGATCTGAACCCGGCAGCCAGCAGAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 72 bp GAAGCCAAGGAAGGGGATTCAGTAACTTGCTGTTCATaGTCCACATCACTGCGCTCCTTACTTTTCATCAGC +
Preference number: 6 (lower is better)
Translates to: EAKEGDSVTCCS*STSLRSLLFIS
Trigger: GCTGATGAAAAGTAAGGAGCGCAGTGATGTGGAGCATGAACAGCAAGTTACTGAATCCCCTTCCTTGGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS GCA 72 bp AGCTCCTCTGCATGTTGTCGCCGTTGCATTAATTTTTaGTCCCGCTTTGTCAGAAACCTGACCAACTGGTTG +
Preference number: 6 (lower is better)
Translates to: SSSACCRRCINF*SRFVRNLTNWL
Trigger: CAACCAGTTGGTCAGGTTTCTGACAAAGCGGGAGCAAAAATTAATGCAACGGCGACAACATGCAGAGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000429851.5
CDS CCA 72 bp CTTCATTATCATCTTTCACAGGTGGAGTTACAGCCTTaGTCCAAGGTCCATCTTCTTGAGGTGCCTGCTGCA +
Preference number: 6 (lower is better)
Translates to: LHYHLSQVELQP*SKVHLLEVPAA
Trigger: TGCAGCAGGCACCTCAAGAAGATGGACCTTGGACCAAGGCTGTAACTCCACCTGTGAAAGATGATAATGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp TGTTTCAGTTCTGGTCCTCAGCTGTTTCACAAAGTCTaGAAGGTGCTGCCGTTGGTGGTCATACAGTATTGC +
Preference number: 6 (lower is better)
Translates to: CFSSGPQLFHKV*KVLPLVVIQYC
Trigger: GCAATACTGTATGACCACCAACGGCAGCACCTTCCAGACTTTGTGAAACAGCTGAGGACCAGAACTGAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS CCA 72 bp ACCAAAGCTAGTGGCTCCACTTGTAGAGCTCCTCATTaGCTGTGGCTTATCTCTGCAAGACTGAGAGTCTTT +
Preference number: 6 (lower is better)
Translates to: TKASGSTCRAPH*LWLISARLRVF
Trigger: AAAGACTCTCAGTCTTGCAGAGATAAGCCACAGCCAATGAGGAGCTCTACAAGTGGAGCCACTAGCTTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS CAA 72 bp GCCTCCTGCCACACTTTCCCATCAGGTGTTCGAATCTaGGTCTCTGAAGGGTTGAAACCTTTATATGCTGGA +
Preference number: 6 (lower is better)
Translates to: ASCHTFPSGVRI*VSEGLKPLYAG
Trigger: TCCAGCATATAAAGGTTTCAACCCTTCAGAGACCAAGATTCGAACACCTGATGGGAAAGTGTGGCAGGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp ACTTCCAGCTGTTCCAGCAAAAGGCTGTGGTTGAGAATGGTGAACTaGTGGGCTCAATCTTTCAGGCTGCATCCATGTAGATTCCATCAA +
Preference number: 6 (lower is better)
Translates to: TSSCSSKRLWLRMVN*WAQSFRLHPCRFHQ
Trigger: TTGATGGAATCTACATGGATGCAGCCTGAAAGATTGAGCCCACAAGTTCACCATTCTCAACCACAGCCTTTTGCTGGAACAGCTGGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp GGGTCTCCAAGTCAGTTGGACCAGGACTGGTTGCCTTATTATCCTTaGTATCATCATCACTATGAGAGTCCAATTTACTCTCCCCTGCAG +
Preference number: 6 (lower is better)
Translates to: GSPSQLDQDWLPYYP*YHHHYESPIYSPLQ
Trigger: CTGCAGGGGAGAGTAAATTGGACTCTCATAGTGATGATGATACAAAGGATAATAAGGCAACCAGTCCTGGTCCAACTGACTTGGAGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp TGGGAGAAGGACTGCGGGTCTCCAAGTCAGTTGGACCAGGACTGGTaGCCTTATTATCCTTTGTATCATCATCACTATGAGAGTCCAATT +
Preference number: 6 (lower is better)
Translates to: WEKDCGSPSQLDQDW*PYYPLYHHHYESPI
Trigger: AATTGGACTCTCATAGTGATGATGATACAAAGGATAATAAGGCAACCAGTCCTGGTCCAACTGACTTGGAGACCCGCAGTCCTTCTCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp TTCTGGTTTGGGACCAGGGGATCTCACTCTAAAGCTTaGTATGGCACTCTGTGGTCTTATCATCTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: FWFGTRGSHSKA*YGTLWSYHLRK
Trigger: CTTCCTGAGATGATAAGACCACAGAGTGCCATATCAAGCTTTAGAGTGAGATCCCCTGGTCCCAAACCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 72 bp AGCTCCTCTGCATGTTGTCGCCGTTGCATTAATTTTTaGTCCCGCTTTGTCAGAAACTTTTCATCCATGCGG +
Preference number: 6 (lower is better)
Translates to: SSSACCRRCINF*SRFVRNFSSMR
Trigger: CCGCATGGATGAAAAGTTTCTGACAAAGCGGGAGCAAAAATTAATGCAACGGCGACAACATGCAGAGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp TGTTCCAGCAAAAGGCTGTGGTTGAGAATGGTGAACTaGTGGGCTCAATCTTTCAGGCTGCATCCATGTAGA +
Preference number: 6 (lower is better)
Translates to: CSSKRLWLRMVN*WAQSFRLHPCR
Trigger: TCTACATGGATGCAGCCTGAAAGATTGAGCCCACAAGTTCACCATTCTCAACCACAGCCTTTTGCTGGAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp TGCCTTTTACATAACTGTGCCAGTAGCCCTTCTGGTTaGGGACCAGGGGATCTCACTCTAAAGCTTGATATG +
Preference number: 6 (lower is better)
Translates to: CLLHNCASSPSG*GPGDLTLKLDM
Trigger: CATATCAAGCTTTAGAGTGAGATCCCCTGGTCCCAAACCAGAAGGGCTACTGGCACAGTTATGTAAAAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp TTAGAGGAGTTGCGGTGGCATTCAAAGGCCGTGATGTaGATGTTCCTCTGTCCAACTTGTCTTCAAACCCTT +
Preference number: 6 (lower is better)
Translates to: LEELRWHSKAVM*MFLCPTCLQTL
Trigger: AAGGGTTTGAAGACAAGTTGGACAGAGGAACATCAACATCACGGCCTTTGAATGCCACCGCAACTCCTCTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp GACTGCGGGTCTCCAAGTCAGTTGGACCAGGACTGGTaGCCTTATTATCCTTTGTATCATCATCACTATGAG +
Preference number: 6 (lower is better)
Translates to: DCGSPSQLDQDW*PYYPLYHHHYE
Trigger: CTCATAGTGATGATGATACAAAGGATAATAAGGCAACCAGTCCTGGTCCAACTGACTTGGAGACCCGCAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp ATAACAGTGCTGATGGGACTTGATAGGCAGGTGACATaGTCCTCCAGTCCTATGACTTCCTTTGCTAGACTC +
Preference number: 6 (lower is better)
Translates to: ITVLMGLDRQVT*SSSPMTSFARL
Trigger: GAGTCTAGCAAAGGAAGTCATAGGACTGGAGGACAATGTCACCTGCCTATCAAGTCCCATCAGCACTGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000437245.1
CDS CAA 72 bp CCCAGGACTCACATTAGCACTCAGCGTTCGATTTATTaGCAAGATGTCACACAAGTAGCATTCTCCCCTGCT +
Preference number: 6 (lower is better)
Translates to: PRTHISTQRSIY*QDVTQVAFSPA
Trigger: AGCAGGGGAGAATGCTACTTGTGTGACATCTTGCAAATAAATCGAACGCTGAGTGCTAATGTGAGTCCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS CAA 90 bp GAGAGGAGACAAAATCATCTTCATATGAAACACCACTTAGAGGAGTaGCGGTGGCATTCAAAGGCCGTGATGTTGATGTTCCTCTGTCCA +
Preference number: 6 (lower is better)
Translates to: ERRQNHLHMKHHLEE*RWHSKAVMLMFLCP
Trigger: TGGACAGAGGAACATCAACATCACGGCCTTTGAATGCCACCGCAACTCCTCTAAGTGGTGTTTCATATGAAGATGATTTTGTCTCCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp GAGACTCCCCTCACTAAGAAGAGGCCCTTCACTGACTaGATCTATGCTGGAACCAAGAGATATTTTGGCTTT +
Preference number: 6 (lower is better)
Translates to: ETPLTKKRPFTD*IYAGTKRYFGF
Trigger: AAAGCCAAAATATCTCTTGGTTCCAGCATAGATTCAGTCAGTGAAGGGCCTCTTCTTAGTGAGGGGAGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp ACAGAAAGTTTGCTGCTGGTCCCAGATTTCTTTCCTTaGTGGGAGCCACGTTCTGCTTTTTCCTCATCAAGA +
Preference number: 6 (lower is better)
Translates to: TESLLLVPDFFP*WEPRSAFSSSR
Trigger: TCTTGATGAGGAAAAAGCAGAACGTGGCTCCCATCAAGGAAAGAAATCTGGGACCAGCAGCAAACTTTCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp TGGGAACTTGGTGACAGGGGAGAAGTTGGAGTTTTCTaGGATCTTCCCTTATCTGATGAGACACTCACAGAA +
Preference number: 6 (lower is better)
Translates to: WELGDRGEVGVF*DLPLSDETLTE
Trigger: TTCTGTGAGTGTCTCATCAGATAAGGGAAGATCTCAGAAAACTCCAACTTCTCCCCTGTCACCAAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 72 bp ACTGCGGGTCTCCAAGTCAGTTGGACCAGGACTGGTTaGCTTATTATCCTTTGTATCATCATCACTATGAGA +
Preference number: 6 (lower is better)
Translates to: TAGLQVSWTRTG*LIILCIIITMR
Trigger: TCTCATAGTGATGATGATACAAAGGATAATAAGGCAACCAGTCCTGGTCCAACTGACTTGGAGACCCGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp GAGCAGCCTTGGTTTGAGAAAGTGCATCCCACGATGTaGTTATATCTGCTTGAACAGTATCCTTGCTTTGAG +
Preference number: 6 (lower is better)
Translates to: EQPWFEKVHPTM*LYLLEQYPCFE
Trigger: CTCAAAGCAAGGATACTGTTCAAGCAGATATAACCACATCGTGGGATGCACTTTCTCAAACCAAGGCTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp CATCTTCATATGAAACACCACTTAGAGGAGTTGCGGTaGCATTCAAAGGCCGTGATGTTGATGTTCCTCTGT +
Preference number: 6 (lower is better)
Translates to: HLHMKHHLEELR*HSKAVMLMFLC
Trigger: ACAGAGGAACATCAACATCACGGCCTTTGAATGCCACCGCAACTCCTCTAAGTGGTGTTTCATATGAAGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp TGGCACCAAATACTGGGCTCTCCTCTGGTGACCATCTaGCTCAAGTTACTCAAAGTCATTACTTTTGCTCAA +
Preference number: 6 (lower is better)
Translates to: WHQILGSPLVTI*LKLLKVITFAQ
Trigger: TTGAGCAAAAGTAATGACTTTGAGTAACTTGAGCCAGATGGTCACCAGAGGAGAGCCCAGTATTTGGTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000496440.1
CDS CAA 72 bp GTTCTGAGAGAGACATGTCACTACTGGAAGATGCACTaGGGGGACGTTCCTGTACTTTGTTTTCTTTGTCAG +
Preference number: 6 (lower is better)
Translates to: VLRETCHYWKMH*GDVPVLCFLCQ
Trigger: CTGACAAAGAAAACAAAGTACAGGAACGTCCCCCAAGTGCATCTTCCAGTAGTGACATGTCTCTCTCAGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp AACAGAAAGTTTGCTGCTGGTCCCAGATTTCTTTCCTaGATGGGAGCCACGTTCTGCTTTTTCCTCATCAAG +
Preference number: 6 (lower is better)
Translates to: NRKFAAGPRFLS*MGATFCFFLIK
Trigger: CTTGATGAGGAAAAAGCAGAACGTGGCTCCCATCAAGGAAAGAAATCTGGGACCAGCAGCAAACTTTCTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp AAACACCACTTAGAGGAGTTGCGGTGGCATTCAAAGGCCGTGATGTaGATGTTCCTCTGTCCAACTTGTCTTCAAACCCTTTTCCATATA +
Preference number: 6 (lower is better)
Translates to: KHHLEELRWHSKAVM*MFLCPTCLQTLFHI
Trigger: TATATGGAAAAGGGTTTGAAGACAAGTTGGACAGAGGAACATCAACATCACGGCCTTTGAATGCCACCGCAACTCCTCTAAGTGGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp CACAGTATACGTGCTTTGATTCCAGATGGCTGGAACTaGAATTGGAAGGTGCACCATGGATTTCCCTATAAG +
Preference number: 6 (lower is better)
Translates to: HSIRALIPDGWN*NWKVHHGFPYK
Trigger: CTTATAGGGAAATCCATGGTGCACCTTCCAATTTCAGTTCCAGCCATCTGGAATCAAAGCACGTATACTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS TCA 72 bp TGTACTTTGTTTTCTTTGTCAGATTCTCCAGATGGCTaGTACCCTGGTTTGGCCTGTGTTTCCTGCGTAACA +
Preference number: 6 (lower is better)
Translates to: CTLFSLSDSPDG*YPGLACVSCVT
Trigger: TGTTACGCAGGAAACACAGGCCAAACCAGGGTATCAGCCATCTGGAGAATCTGACAAAGAAAACAAAGTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp TCCTGTGAACAAATCATTTCTTCAGTAAGTATACTGTaGTCTGGACTCCCTGGCTGCTCCTGTCCTATAGAC +
Preference number: 6 (lower is better)
Translates to: SCEQIISSVSIL*SGLPGCSCPID
Trigger: GTCTATAGGACAGGAGCAGCCAGGGAGTCCAGATCACAGTATACTTACTGAAGAAATGATTTGTTCACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 72 bp TTTGAAGAAATCTGTGAATCCACTGAAGACTGCTGGTaGACATGGGCTTCAAGTACCCCAGAAATGTCCTGT +
Preference number: 6 (lower is better)
Translates to: FEEICESTEDCW*TWASSTPEMSC
Trigger: ACAGGACATTTCTGGGGTACTTGAAGCCCATGTTCACCAGCAGTCTTCAGTGGATTCACAGATTTCTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS GCA 72 bp CAAAATCACAGCTCCGTATATTCCGTTCTTCTCGACTaGCTATCATCCAGTTACCGCTCTCAGTCTTTTCTT +
Preference number: 6 (lower is better)
Translates to: QNHSSVYSVLLD*LSSSYRSQSFL
Trigger: AAGAAAAGACTGAGAGCGGTAACTGGATGATAGGCAGTCGAGAAGAACGGAATATACGGAGCTGTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS GCA 72 bp TTTATGGTGGTCTGTCGGATCTTTTCTATCTCCTCCTaGTGTTTAAGAATCAGCTGTCTTTCCTTCCGAGCT +
Preference number: 6 (lower is better)
Translates to: FMVVCRIFSISS*CLRISCLSFRA
Trigger: AGCTCGGAAGGAAAGACAGCTGATTCTTAAACAGCAGGAGGAGATAGAAAAGATCCGACAGACCACCATAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp AGTTTCTTTGAAGATGTCTATGTAAAACGTCCAACCTaGGATCAGATTCTGCTCTTCCAATGTGACCCCCAG +
Preference number: 6 (lower is better)
Translates to: SFFEDVYVKRPT*DQILLFQCDPQ
Trigger: CTGGGGGTCACATTGGAAGAGCAGAATCTGATCCCAGGTTGGACGTTTTACATAGACATCTTCAAAGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp ACCAAATACTGGGCTCTCCGGTCTGGGACACATATCTaGAGAGGAAATCTCTTCTTTTTCATCTTCCAATTC +
Preference number: 6 (lower is better)
Translates to: TKYWALRSGTHI*RGNLFFFIFQF
Trigger: GAATTGGAAGATGAAAAAGAAGAGATTTCCTCTCCAGATATGTGTCCCAGACCGGAGAGCCCAGTATTTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CAA 72 bp CAGCTGTCTTTCCTTCCGAGCTGCCTTATTGGCTTCTaGAAGACGTTTTATTTCTGCCTTTTCTTGCTGCAA +
Preference number: 6 (lower is better)
Translates to: QLSFLPSCLIGF*KTFYFCLFLLQ
Trigger: TTGCAGCAAGAAAAGGCAGAAATAAAACGTCTTCAAGAAGCCAATAAGGCAGCTCGGAAGGAAAGACAGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp GCCCTGAGAGGACTACGAGATTTCTCTTTTCGTGATTTAGTGGATTaGGAGATTGGAGCATTAACCCAAGAATCATCCAGGTATCTACCA +
Preference number: 6 (lower is better)
Translates to: ALRGLRDFSFRDLVD*EIGALTQESSRYLP
Trigger: TGGTAGATACCTGGATGATTCTTGGGTTAATGCTCCAATCTCCAAATCCACTAAATCACGAAAAGAGAAATCTCGTAGTCCTCTCAGGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357434.2
ENST00000367607.8
ENST00000491495.2
CDS CAA 90 bp TCTGCAGCGATGGAAACCTTTTCTGTGGCATCAGAAATGAGGTCTTaGTTTTCCTTTGAAGAAATCTGTGAATCCACTGAAGACTGCTGG +
Preference number: 6 (lower is better)
Translates to: SAAMETFSVASEMRS*FSFEEICESTEDCW
Trigger: CCAGCAGTCTTCAGTGGATTCACAGATTTCTTCAAAGGAAAACAAAGACCTCATTTCTGATGCCACAGAAAAGGTTTCCATCGCTGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS TCA 72 bp TTATCAACATTAACAACCATTACTGGATGGTCAATATaGCCCAGCTTCTGGCCCCGGCCATTTGTTTCTTCT +
Preference number: 6 (lower is better)
Translates to: LSTLTTITGWSI*PSFWPRPFVSS
Trigger: AGAAGAAACAAATGGCCGGGGCCAGAAGCTGGGTCATATTGACCATCCAGTAATGGTTGTTAATGTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp CAAAATCATCTTCATATGAAACACCACTTAGAGGAGTaGCGGTGGCATTCAAAGGCCGTGATGTTGATGTTC +
Preference number: 6 (lower is better)
Translates to: QNHLHMKHHLEE*RWHSKAVMLMF
Trigger: GAACATCAACATCACGGCCTTTGAATGCCACCGCAACTCCTCTAAGTGGTGTTTCATATGAAGATGATTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 72 bp AACTGCTGTTGCTTCTCCAATTCTTCGGAAAAGGTATaGTCTAAAGTGTCATCTTCTGCAGCGATGGAAACC +
Preference number: 6 (lower is better)
Translates to: NCCCFSNSSEKV*SKVSSSAAMET
Trigger: GGTTTCCATCGCTGCAGAAGATGACACTTTAGACAATACCTTTTCCGAAGAATTGGAGAAGCAACAGCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CAA 72 bp GGTGTACAAAGCTTTTCTGAAGCTTCAGCATATAGGTaGTCTTCCTCTTCTGTAAACTGCTGTTGCTTCTCC +
Preference number: 6 (lower is better)
Translates to: GVQSFSEASAYR*SSSSVNCCCFS
Trigger: GGAGAAGCAACAGCAGTTTACAGAAGAGGAAGACAACCTATATGCTGAAGCTTCAGAAAAGCTTTGTACACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CAA 72 bp AAGAATCATCCAGGTATCTACCATAGCAGCCTTGGTTaGAGAAAGTGCATCCCACGATGTGGTTATATCTTG +
Preference number: 6 (lower is better)
Translates to: KNHPGIYHSSLG*RKCIPRCGYIL
Trigger: CAAGATATAACCACATCGTGGGATGCACTTTCTCAAACCAAGGCTGCTATGGTAGATACCTGGATGATTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491495.2
CDS CAA 90 bp ATGTGGTTATATCTGCTTGAACAGTATCCTTGCTTTGAGAGTTCCTaGGATTTGGTAAAGGCACCTCTTTTGATTTGCTGCTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: MWLYLLEQYPCFESS*DLVKAPLLICCSSS
Trigger: GGATGAGGAGCAGCAAATCAAAAGAGGTGCCTTTACCAAATCCAAGGAACTCTCAAAGCAAGGATACTGTTCAAGCAGATATAACCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp TCCAGAAGTGGTGTACAAAGCTTTTCTGAAGCTTCAGCATATAGGTaGTCTTCCTCTTCTGTAAACTGCTGTTGCTTCTCCAATTCTTCG +
Preference number: 6 (lower is better)
Translates to: SRSGVQSFSEASAYR*SSSSVNCCCFSNSS
Trigger: CGAAGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGAAGACAACCTATATGCTGAAGCTTCAGAAAAGCTTTGTACACCACTTCTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CAA 90 bp ACGATGTGGTTATATCTTGAACAGTATCCTTGCTTTGAGAGTTCCTaGGATTTGGTAAAGGCACCTCTTTTGATTTGCTGCTCCTCATCC +
Preference number: 6 (lower is better)
Translates to: TMWLYLEQYPCFESS*DLVKAPLLICCSSS
Trigger: GGATGAGGAGCAGCAAATCAAAAGAGGTGCCTTTACCAAATCCAAGGAACTCTCAAAGCAAGGATACTGTTCAAGATATAACCACATCGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491495.2
CDS TCA 72 bp CTCCATAGTAAATTTAGAAAAGCTATCTTGTCCTCCTaGGAATGGCATGTTCAGTTCCTTGGCAGTAGACAG +
Preference number: 6 (lower is better)
Translates to: LHSKFRKAILSS*EWHVQFLGSRQ
Trigger: CTGTCTACTGCCAAGGAACTGAACATGCCATTCTCAGGAGGACAAGATAGCTTTTCTAAATTTACTATGGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000418229.5
CDS TCA 72 bp CCTAATTCTTCTGGAATGGAGCTTTCACTGTTTAGATaGGAGTACAGAGGTACTGGAGATTCCTCTTCACTT +
Preference number: 6 (lower is better)
Translates to: PNSSGMELSLFR*EYRGTGDSSSL
Trigger: AAGTGAAGAGGAATCTCCAGTACCTCTGTACTCTCATCTAAACAGTGAAAGCTCCATTCCAGAAGAATTAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000429851.5
CDS TCA 72 bp GGTGTTACTTTCTTTTGGTCATCACCAAGAAGCTCCTaGTTGCTAAGCTGGATTTTCTCATCCCTGGTTTTT +
Preference number: 6 (lower is better)
Translates to: GVTFFWSSPRSS*LLSWIFSSLVF
Trigger: AAAAACCAGGGATGAGAAAATCCAGCTTAGCAATCAGGAGCTTCTTGGTGATGACCAAAAGAAAGTAACACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS TCA 72 bp GCACAGCCAAGCAGTTTTGTAGGAATACTGATGCTATaGAGATCGTGGCCTAATTCTTTCCATTTCCAAAGT +
Preference number: 6 (lower is better)
Translates to: AQPSSFVGILML*RSWPNSFHFQS
Trigger: ACTTTGGAAATGGAAAGAATTAGGCCACGATCTTCATAGCATCAGTATTCCTACAAAACTGCTTGGCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS TCA 72 bp CACACAAGTAGCATTCTCCCCTGCTTTTCACTGATCTaGTTCAGAACATCAATAGTATCTTTGATCAGGGTC +
Preference number: 6 (lower is better)
Translates to: HTSSILPCFSLI*FRTSIVSLIRV
Trigger: GACCCTGATCAAAGATACTATTGATGTTCTGAATCAGATCAGTGAAAAGCAGGGGAGAATGCTACTTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS GCA 72 bp GCTTCAGCATATAGGTTGTCTTCCTCTTCTGTAAACTaGTGTTGCTTCTCCAATTCTTCGGAAAAGGTATTG +
Preference number: 6 (lower is better)
Translates to: ASAYRLSSSSVN*CCFSNSSEKVL
Trigger: CAATACCTTTTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGAAGACAACCTATATGCTGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CCA 72 bp CACTTGATGCTGTTCTTTGCTCTTTTGGCTCCATTCTaGGAGCAGGTCCCAGAATCTTCTTTACTAATTTTT +
Preference number: 6 (lower is better)
Translates to: HLMLFFALLAPF*EQVPESSLLIF
Trigger: AAAAATTAGTAAAGAAGATTCTGGGACCTGCTCCCAGAATGGAGCCAAAAGAGCAAAGAACAGCATCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp TTATGCAAAATTCCTACATGCTCTAAACTCAAGAGATaGGAGAGTAAACTTCCAGCTGTTCCAGCAAAAGGC +
Preference number: 6 (lower is better)
Translates to: LCKIPTCSKLKR*ESKLPAVPAKG
Trigger: GCCTTTTGCTGGAACAGCTGGAAGTTTACTCTCCCATCTCTTGAGTTTAGAGCATGTAGGAATTTTGCATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp GCATTATGTACAAGAATCTCTACTTCTTCTGCAGTATaGGGGACTGCCAATAATGTTTCACATGGTTGTTGG +
Preference number: 6 (lower is better)
Translates to: ALCTRISTSSAV*GTANNVSHGCW
Trigger: CCAACAACCATGTGAAACATTATTGGCAGTCCCCCATACTGCAGAAGAAGTAGAGATTCTTGTACATAATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS CAA 72 bp GGACTACGAGATTTCTCTTTTCGTGATTTAGTGGATTaGGAGATTGGAGCATTAACCCAAGAATCATCCAGG +
Preference number: 6 (lower is better)
Translates to: GLRDFSFRDLVD*EIGALTQESSR
Trigger: CCTGGATGATTCTTGGGTTAATGCTCCAATCTCCAAATCCACTAAATCACGAAAAGAGAAATCTCGTAGTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357434.2
ENST00000367607.8
ENST00000491495.2
CDS CAA 72 bp CTTCACTTTCAATTCTGCTGGACAAAGAAGCAGCTGTaGCTTTCAAGGCTTCAATACGATCCAGTTTACTCT +
Preference number: 6 (lower is better)
Translates to: LHFQFCWTKKQL*LSRLQYDPVYS
Trigger: AGAGTAAACTGGATCGTATTGAAGCCTTGAAAGCAACAGCTGCTTCTTTGTCCAGCAGAATTGAAAGTGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CAA 90 bp TCTTCTGTAAACTGCTGTTGCTTCTCCAATTCTTCGGAAAAGGTATaGTCTAAAGTGTCATCTTCTGCAGCGATGGAAACCTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SSVNCCCFSNSSEKV*SKVSSSAAMETFSV
Trigger: CACAGAAAAGGTTTCCATCGCTGCAGAAGATGACACTTTAGACAATACCTTTTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CAA 90 bp ATTTCTTGGCTTCACTTTCAATTCTGCTGGACAAAGAAGCAGCTGTaGCTTTCAAGGCTTCAATACGATCCAGTTTACTCTTATATTGGC +
Preference number: 6 (lower is better)
Translates to: ISWLHFQFCWTKKQL*LSRLQYDPVYSYIG
Trigger: GCCAATATAAGAGTAAACTGGATCGTATTGAAGCCTTGAAAGCAACAGCTGCTTCTTTGTCCAGCAGAATTGAAAGTGAAGCCAAGAAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp AATTTATTTTCAATGTGTCTCAGAGCAGCCTTGGTTTaGGAAAGTGCATCCCACGATGTGGTTATATCTGCT +
Preference number: 6 (lower is better)
Translates to: NLFSMCLRAALV*ESASHDVVISA
Trigger: AGCAGATATAACCACATCGTGGGATGCACTTTCTCAAACCAAGGCTGCTCTGAGACACATTGAAAATAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS TCA 72 bp ATTTTCCTTGATGATCTGAGAACTGGAGATGGGGTCTaGAAATCTTCTGTTCGACTGTCCCATTCATTTACT +
Preference number: 6 (lower is better)
Translates to: IFLDDLRTGDGV*KSSVRLSHSFT
Trigger: AGTAAATGAATGGGACAGTCGAACAGAAGATTTTCAGACCCCATCTCCAGTTCTCAGATCATCAAGGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS TCA 72 bp CTAGAGTTGATTCTACATGGCTTCATCCAGACAGGTTaGTTTAAGTTGGGATCCTCAGCAAATATTTCCTCA +
Preference number: 6 (lower is better)
Translates to: LELILHGFIQTG*FKLGSSANISS
Trigger: TGAGGAAATATTTGCTGAGGATCCCAACTTAAATCAACCTGTCTGGATGAAGCCATGTAGAATCAACTCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS GCA 72 bp TGTAAAAATATTAATGACGCTATGTGGACTTCCCTTTaGCAATTCTTCCCATGGTCCTTTGCTTTGTGTACC +
Preference number: 6 (lower is better)
Translates to: CKNINDAMWTSL*QFFPWSFALCT
Trigger: GGTACACAAAGCAAAGGACCATGGGAAGAATTGGCAAAGGGAAGTCCACATAGCGTCATTAATATTTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS CCA 72 bp TCCTTCAGAGCTCTGATCCTACCTTCAATATCACTCTaGTCAGATGTAGTTTCTGACTGTGTCATAGATAAT +
Preference number: 6 (lower is better)
Translates to: SFRALILPSISL*SDVVSDCVIDN
Trigger: ATTATCTATGACACAGTCAGAAACTACATCTGACCAGAGTGATATTGAAGGTAGGATCAGAGCTCTGAAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000437245.1
CDS CAA 90 bp GAGTGTTCCCACTGTTTTCTAATCCGTTCCTTAAGTTTTTCCAGTTaGACATCATGTTGTCGCCGCTTTAGAATATCTAATCTTTGGGAA +
Preference number: 6 (lower is better)
Translates to: ECSHCFLIRSLSFSS*TSCCRRFRISNLWE
Trigger: TTCCCAAAGATTAGATATTCTAAAGCGGCGACAACATGATGTCAAACTGGAAAAACTTAAGGAACGGATTAGAAAACAGTGGGAACACTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000367607.8
CDS GCA 72 bp GCATATAGGTTGTCTTCCTCTTCTGTAAACTGCTGTTaGTTCTCCAATTCTTCGGAAAAGGTATTGTCTAAA +
Preference number: 6 (lower is better)
Translates to: AYRLSSSSVNCC*FSNSSEKVLSK
Trigger: TTTAGACAATACCTTTTCCGAAGAATTGGAGAAGCAACAGCAGTTTACAGAAGAGGAAGACAACCTATATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
CDS CCA 72 bp AAAAACCTAACAACTGTATCATTGATGACAGATGATTaGGAGCTCTCAAAATCACAGCTCCGTATATTCCGT +
Preference number: 6 (lower is better)
Translates to: KNLTTVSLMTDD*ELSKSQLRIFR
Trigger: ACGGAATATACGGAGCTGTGATTTTGAGAGCTCCCAATCATCTGTCATCAATGATACAGTTGTTAGGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367607.8
ENST00000491495.2
CDS GCA 72 bp CTCCTTTTTAAGACTGAACAACTTGAGTACTTCACTTaGTATGAAGCTCTTGATTTCATCAAGGTTATTTGG +
Preference number: 6 (lower is better)
Translates to: LLFKTEQLEYFT*YEALDFIKVIW
Trigger: CCAAATAACCTTGATGAAATCAAGAGCTTCATAGCAAGTGAAGTACTCAAGTTGTTCAGTCTTAAAAAGGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1
CDS TCA 72 bp TTCCTTTGTGTTCTTTTGTTCGTGAATGTCTTTTCCTaGTTGGATGTTTGGACTATGATTCATATCTTGATC +
Preference number: 6 (lower is better)
Translates to: FLCVLLFVNVFS*LDVWTMIHILI
Trigger: GATCAAGATATGAATCATAGTCCAAACATCCAATCAGGAAAAGACATTCACGAACAAAAGAACACAAAGGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000367607.8
ENST00000429851.5
ENST00000490141.5
CDS CAA 72 bp TTTCTTCCAAATTTCATCATTTTCTGCCAATCTGTTTaGTGGTTTGGCTCCTTTTTAAGACTGAACAACTTG +
Preference number: 6 (lower is better)
Translates to: FLPNFIIFCQSV*WFGSFLRLNNL
Trigger: CAAGTTGTTCAGTCTTAAAAAGGAGCCAAACCACAAAACAGATTGGCAGAAAATGATGAAATTTGGAAGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000367607.8
ENST00000417046.1
ENST00000429851.5
ENST00000490141.5
ENST00000496440.1