Pregenerated sensors for CEP295 (Homo sapiens)
Ensembl gene IDs: ENSG00000166004Ensembl transcript IDs: ENST00000325212.11, ENST00000529185.1, ENST00000530425.1, ENST00000531404.1, ENST00000531700.5, ENST00000531877.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATCATGGGCCAGTGGGCTCCCAAAGAAACTTTGTTCTCGGCTTATTaGGACTCGCAGGGGGTCTCTGTCTTCATAAATACCTGGTTTACC | + |
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Preference number: 5 (lower is better) Translates to: IMGQWAPKETLFSAY*DSQGVSVFINTWFT Trigger: GGTAAACCAGGTATTTATGAAGACAGAGACCCCCTGCGAGTCTCAATAAGCCGAGAACAAAGTTTCTTTGGGAGCCCACTGGCCCATGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000325212.11 ENST00000530425.1 ENST00000531700.5 |
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| CDS TCA 90 bp | TGTCACTGGAAGGTCTTCAGCTGCACCCAAATTTTCTTGTTCCATTaGAAGGTCCAGCTCTTCATCTTGGATCTGATTAGTCACAGTGGG | + |
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Preference number: 5 (lower is better) Translates to: CHWKVFSCTQIFLFH*KVQLFILDLISHSG Trigger: CCCACTGTGACTAATCAGATCCAAGATGAAGAGCTGGACCTTTCAATGGAACAAGAAAATTTGGGTGCAGCTGAAGACCTTCCAGTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 90 bp | TTCTTGGAGGGCCTTCATATTACCTTGCTGGGCTGTGATATTCTCTaGCGGCAGCAAAGGCCTATCATGCATTTGGCTGATTATAGAATG | + |
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Preference number: 5 (lower is better) Translates to: FLEGLHITLLGCDIL*RQQRPIMHLADYRM Trigger: CATTCTATAATCAGCCAAATGCATGATAGGCCTTTGCTGCCGTCAGAGAATATCACAGCCCAGCAAGGTAATATGAAGGCCCTCCAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS GCA 90 bp | CCTTGCTGGGCTGTGATATTCTCTGACGGCAGCAAAGGCCTATCATaGATTTGGCTGATTATAGAATGGCTTGTGGAAACTGTACTTTTG | + |
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Preference number: 5 (lower is better) Translates to: PCWAVIFSDGSKGLS*IWLIIEWLVETVLL Trigger: CAAAAGTACAGTTTCCACAAGCCATTCTATAATCAGCCAAATGCATGATAGGCCTTTGCTGCCGTCAGAGAATATCACAGCCCAGCAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | TGGCTTAAGGGAATGGTACTGTCACTCTTGATTGATATACATTCCTaGAATCTCTCAGATTCATCCACCTGGGAAAGGGATGAGGAGGTG | + |
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Preference number: 5 (lower is better) Translates to: WLKGMVLSLLIDIHS*NLSDSSTWERDEEV Trigger: CACCTCCTCATCCCTTTCCCAGGTGGATGAATCTGAGAGATTCCAGGAATGTATATCAATCAAGAGTGACAGTACCATTCCCTTAAGCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | GTTGGGAAAGACTTCTGGGTTCTTTCAGAGTCAGCAACAGGCACCTaGGATACAAATGAAGAGGAGCAAACTTGTTCAGATGATACCCTT | + |
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Preference number: 5 (lower is better) Translates to: VGKDFWVLSESATGT*DTNEEEQTCSDDTL Trigger: AAGGGTATCATCTGAACAAGTTTGCTCCTCTTCATTTGTATCCCAGGTGCCTGTTGCTGACTCTGAAAGAACCCAGAAGTCTTTCCCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CCA 90 bp | GCTGCCTGTCATGTGACAAAGCCCTTGAAAGTGTCTCAGAATCTTTaGGGACCAATTTATAGTCTCTCTGTTGTGTTTCAGTCTGAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AACHVTKPLKVSQNL*GPIYSLSVVFQSER Trigger: TCTCTCAGACTGAAACACAACAGAGAGACTATAAATTGGTCCCCAAAGATTCTGAGACACTTTCAAGGGCTTTGTCACATGACAGGCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | TCTGACGGCAGCAAAGGCCTATCATGCATTTGGCTGATTATAGAATaGCTTGTGGAAACTGTACTTTTGCTCATGGCTGAAAAGGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: SDGSKGLSCIWLIIE*LVETVLLLMAEKGS Trigger: AGAACCCTTTTCAGCCATGAGCAAAAGTACAGTTTCCACAAGCCATTCTATAATCAGCCAAATGCATGATAGGCCTTTGCTGCCGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | TGGGCTGTGATATTCTCTGACGGCAGCAAAGGCCTATCATGCATTTaGCTGATTATAGAATGGCTTGTGGAAACTGTACTTTTGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: WAVIFSDGSKGLSCI*LIIEWLVETVLLLM Trigger: CATGAGCAAAAGTACAGTTTCCACAAGCCATTCTATAATCAGCCAAATGCATGATAGGCCTTTGCTGCCGTCAGAGAATATCACAGCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS GCA 90 bp | CTGCCAATTGCTGGTGACTCTACTTCTTGTATAGCACTAAGTTCATaGTGGTTTAAGTCCAAACCACATTTGACTTTTGCTACAGGTGGC | + |
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Preference number: 5 (lower is better) Translates to: LPIAGDSTSCIALSS*WFKSKPHLTFATGG Trigger: GCCACCTGTAGCAAAAGTCAAATGTGGTTTGGACTTAAACCAGCATGAACTTAGTGCTATACAAGAAGTAGAGTCACCAGCAATTGGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | TATTCTTGGTTGGTGAAGATTCCTGGATTCTCCCCAAATCTGCTTTaGCAGAAGGCAATAAAGCAGATGAATCTGGAGTTACCAAGGGAA | + |
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Preference number: 5 (lower is better) Translates to: YSWLVKIPGFSPNLL*QKAIKQMNLELPRE Trigger: TTCCCTTGGTAACTCCAGATTCATCTGCTTTATTGCCTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAACCAAGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | CTCTTGATTGATATACATTCCTGGAATCTCTCAGATTCATCCACCTaGGAAAGGGATGAGGAGGTGCCAGTCTGTTCAGAAGAAATTCTT | + |
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Preference number: 5 (lower is better) Translates to: LLIDIHSWNLSDSST*ERDEEVPVCSEEIL Trigger: AAGAATTTCTTCTGAACAGACTGGCACCTCCTCATCCCTTTCCCAGGTGGATGAATCTGAGAGATTCCAGGAATGTATATCAATCAAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 90 bp | AATGATGGAGCTGACACCGATGGGCACCTTCCTTTTAACATAGTTTaGTATTCAAGTAATTGTTTCCTGGCTGTTTCAACAGACTGCCTG | + |
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Preference number: 5 (lower is better) Translates to: NDGADTDGHLPFNIV*YSSNCFLAVSTDCL Trigger: CAGGCAGTCTGTTGAAACAGCCAGGAAACAATTACTTGAATATCAAACTATGTTAAAAGGAAGGTGCCCATCGGTGTCAGCTCCATCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000325212.11 ENST00000531700.5 ENST00000531877.1 |
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| CDS TCA 90 bp | ATCTTTCTCCAGATGCTCACCACTTTGCTTGGCACTAGTATCTTCTaGAGCCAAATGATTATCATCAGAGTTGTTCCTATCTGCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: IFLQMLTTLLGTSIF*SQMIIIRVVPICMP Trigger: AGGCATGCAGATAGGAACAACTCTGATGATAATCATTTGGCTTCAGAAGATACTAGTGCCAAGCAAAGTGGTGAGCATCTGGAGAAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | TGGTCTGAGGAAACTGCAATATTATTCTTGGTTGGTGAAGATTCCTaGATTCTCCCCAAATCTGCTTTGGCAGAAGGCAATAAAGCAGAT | + |
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Preference number: 5 (lower is better) Translates to: WSEETAILFLVGEDS*ILPKSALAEGNKAD Trigger: ATCTGCTTTATTGCCTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAACCAAGAATAATATTGCAGTTTCCTCAGACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS GCA 90 bp | GCCCCAAATGTTTCAGATATTTTTCTAGCATCCTGTGATATTAGCTaGCTGTCATGTGACAAAGCCCTTGAAAGTGTCTCAGAATCTTTG | + |
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Preference number: 5 (lower is better) Translates to: APNVSDIFLASCDIS*LSCDKALESVSESL Trigger: CAAAGATTCTGAGACACTTTCAAGGGCTTTGTCACATGACAGGCAGCTAATATCACAGGATGCTAGAAAAATATCTGAAACATTTGGGGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | CCAATTGCTGGTGACTCTACTTCTTGTATAGCACTAAGTTCATGCTaGTTTAAGTCCAAACCACATTTGACTTTTGCTACAGGTGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: PIAGDSTSCIALSSC*FKSKPHLTFATGGF Trigger: AAAGCCACCTGTAGCAAAAGTCAAATGTGGTTTGGACTTAAACCAGCATGAACTTAGTGCTATACAAGAAGTAGAGTCACCAGCAATTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 90 bp | TGTGATAAACCCAACAGCCCATCAGGCAATGTTGGTATCTCTGAGTaGCCTGAGGATACTATATTATCACTGTTAATTGAACATGGTTCT | + |
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Preference number: 5 (lower is better) Translates to: CDKPNSPSGNVGISE*PEDTILSLLIEHGS Trigger: AGAACCATGTTCAATTAACAGTGATAATATAGTATCCTCAGGTCACTCAGAGATACCAACATTGCCTGATGGGCTGTTGGGTTTATCACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CCA 90 bp | CCAGACTCAGCTGAAGCTAACGAAGTAAATGAAAGCTGTACCAACTaGGGTATGAATGAAGATGAACCAGTTTGTTCAGAAGATGTATTT | + |
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Preference number: 5 (lower is better) Translates to: PDSAEANEVNESCTN*GMNEDEPVCSEDVF Trigger: AAATACATCTTCTGAACAAACTGGTTCATCTTCATTCATACCCCAGTTGGTACAGCTTTCATTTACTTCGTTAGCTTCAGCTGAGTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 90 bp | AGATGCTCACCACTTTGCTTGGCACTAGTATCTTCTGAAGCCAAATaGTTATCATCAGAGTTGTTCCTATCTGCATGCCTAATATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: RCSPLCLALVSSEAK*LSSELFLSACLIFS Trigger: AGAAAATATTAGGCATGCAGATAGGAACAACTCTGATGATAATCATTTGGCTTCAGAAGATACTAGTGCCAAGCAAAGTGGTGAGCATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 90 bp | CCTGGTTTACCACTTTGCTTGGCACTAGTATCTTCTGAAGCCAAATaGTTATCATCAGAGTTGTTCCTATCTGCATGCCTAATATTTTCT | + |
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Preference number: 5 (lower is better) Translates to: PGLPLCLALVSSEAK*LSSELFLSACLIFS Trigger: AGAAAATATTAGGCATGCAGATAGGAACAACTCTGATGATAATCATTTGGCTTCAGAAGATACTAGTGCCAAGCAAAGTGGTAAACCAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000530425.1 ENST00000531700.5 |
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| CDS TCA 90 bp | TTCATAAATACCTGGTTTACCACTTTGCTTGGCACTAGTATCTTCTaGAGCCAAATGATTATCATCAGAGTTGTTCCTATCTGCATGCCT | + |
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Preference number: 5 (lower is better) Translates to: FINTWFTTLLGTSIF*SQMIIIRVVPICMP Trigger: AGGCATGCAGATAGGAACAACTCTGATGATAATCATTTGGCTTCAGAAGATACTAGTGCCAAGCAAAGTGGTAAACCAGGTATTTATGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530425.1 ENST00000531700.5 |
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| CDS CCA 90 bp | TCTGAGAGAATTGCCTTAGATGTTCTTGTGATTCTAAAGCTTGATTaGTTAAAATATCTGAAGCGCGTAATGTTTCTGTTGTTTCCACCT | + |
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Preference number: 5 (lower is better) Translates to: SERIALDVLVILKLD*LKYLKRVMFLLFPP Trigger: AGGTGGAAACAACAGAAACATTACGCGCTTCAGATATTTTAACCAATCAAGCTTTAGAATCACAAGAACATCTAAGGCAATTCTCTCAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 90 bp | ACCCTTTTCTCCAATTCACTTAATCTTTGCAAAAGCAATTCTTCTTaGACTTCCTGTATAGATCGAATGGCTTTCTTCTGTGTATCTAAC | + |
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Preference number: 5 (lower is better) Translates to: TLFSNSLNLCKSNSS*TSCIDRMAFFCVSN Trigger: GTTAGATACACAGAAGAAAGCCATTCGATCTATACAGGAAGTCCAAGAAGAATTGCTTTTGCAAAGATTAAGTGAATTGGAGAAAAGGGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS TCA 72 bp | GTTCTTGGAGGGCCTTCATATTACCTTGCTGGGCTGTaGTATTCTCTGACGGCAGCAAAGGCCTATCATGCA | + |
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Preference number: 6 (lower is better) Translates to: VLGGPSYYLAGL*YSLTAAKAYHA Trigger: TGCATGATAGGCCTTTGCTGCCGTCAGAGAATATCACAGCCCAGCAAGGTAATATGAAGGCCCTCCAAGAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 72 bp | CTGCCTATGACTATCTTCATCAGAAATTACAGGGCATaGTGCTGGAGCAATGCCAACCCCAGTCGGTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LPMTIFIRNYRA*CWSNANPSRLS Trigger: ACTCAACCGACTGGGGTTGGCATTGCTCCAGCATCATGCCCTGTAATTTCTGATGAAGATAGTCATAGGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 72 bp | GGCCTTCATATTACCTTGCTGGGCTGTGATATTCTCTaGCGGCAGCAAAGGCCTATCATGCATTTGGCTGAT | + |
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Preference number: 6 (lower is better) Translates to: GLHITLLGCDIL*RQQRPIMHLAD Trigger: ATCAGCCAAATGCATGATAGGCCTTTGCTGCCGTCAGAGAATATCACAGCCCAGCAAGGTAATATGAAGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS TCA 72 bp | CAGTGGGCTCCCAAAGAAACTTTGTTCTCGGCTTATTaGGACTCGCAGGGGGTCTCTGTCTTCATAAATACC | + |
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Preference number: 6 (lower is better) Translates to: QWAPKETLFSAY*DSQGVSVFINT Trigger: GGTATTTATGAAGACAGAGACCCCCTGCGAGTCTCAATAAGCCGAGAACAAAGTTTCTTTGGGAGCCCACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000325212.11 ENST00000530425.1 ENST00000531700.5 |
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| CDS CCA 72 bp | CTTGTTCCTGCCCAGAGGATAACGTTCTCTCTTTGCTaGCAATTGTTCCTGACTCAACCGTTGGTGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: LVPAQRITFSLC*QLFLTQPLVLY Trigger: GTAAAGCACCAACGGTTGAGTCAGGAACAATTGCCAGCAAAGAGAGAACGTTATCCTCTGGGCAGGAACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | ACAACTTGTTCCTGCCCAGAGGATAACGTTCTCTCTTaGCTGGCAATTGTTCCTGACTCAACCGTTGGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TTCSCPEDNVLS*LAIVPDSTVGA Trigger: AGCACCAACGGTTGAGTCAGGAACAATTGCCAGCAAAGAGAGAACGTTATCCTCTGGGCAGGAACAAGTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 90 bp | CTTCAGCTTAACTGCTTCATCATAGTCATCACCACAGACATTCTCTaGGCCAACCAGTTGAAGACAACTAAACGGATCATGGGCCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LQLNCFIIVITTDIL*ANQLKTTKRIMGQW Trigger: CCACTGGCCCATGATCCGTTTAGTTGTCTTCAACTGGTTGGCCAAGAGAATGTCTGTGGTGATGACTATGATGAAGCAGTTAAGCTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000325212.11 ENST00000530425.1 ENST00000531700.5 |
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| CDS TCA 72 bp | GTCCAAACCACATTTGACTTTTGCTACAGGTGGCTTTaGGGATCTTCTCCCCAGATCTTTCTCCAGATGCTC | + |
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Preference number: 6 (lower is better) Translates to: VQTTFDFCYRWL*GSSPQIFLQML Trigger: GAGCATCTGGAGAAAGATCTGGGGAGAAGATCCTCAAAGCCACCTGTAGCAAAAGTCAAATGTGGTTTGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS GCA 72 bp | TGTGCTACAGTCTGTCTCCTACGTGCCAGGTCCTCTTaGTGTAGCTGTTTGAGTTCTTTCATTAGTTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: CATVCLLRARSS*CSCLSSFISFS Trigger: GGAGAAACTAATGAAAGAACTCAAACAGCTACAGCAAGAGGACCTGGCACGTAGGAGACAGACTGTAGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | ATCTTGGATCTGATTAGTCACAGTGGGCAAGGGCTCTaGTTCAAGGTGCAGAATCAGATTCCCTTTCACCTT | + |
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Preference number: 6 (lower is better) Translates to: ILDLISHSGQGL*FKVQNQIPFHL Trigger: AAGGTGAAAGGGAATCTGATTCTGCACCTTGAACCAGAGCCCTTGCCCACTGTGACTAATCAGATCCAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | GACTTCTGGGTTCTTTCAGAGTCAGCAACAGGCACCTaGGATACAAATGAAGAGGAGCAAACTTGTTCAGAT | + |
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Preference number: 6 (lower is better) Translates to: DFWVLSESATGT*DTNEEEQTCSD Trigger: ATCTGAACAAGTTTGCTCCTCTTCATTTGTATCCCAGGTGCCTGTTGCTGACTCTGAAAGAACCCAGAAGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CCA 72 bp | GGAAGAGTATCATTACTTTTGGTTGGGAAAGACTTCTaGGTTCTTTCAGAGTCAGCAACAGGCACCTGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GRVSLLLVGKDF*VLSESATGTWD Trigger: ATCCCAGGTGCCTGTTGCTGACTCTGAAAGAACCCAGAAGTCTTTCCCAACCAAAAGTAATGATACTCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 90 bp | ATGTTCTCAAAAAGAGTTGGAGGAGGAGGTGGCAGACTTGTAATTTaGGCTGATCTCTCTTTTTCCACAAGCAGTGCTTCCTTTCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: MFSKRVGGGGGRLVI*ADLSFSTSSASFRA Trigger: AGCTCGAAAGGAAGCACTGCTTGTGGAAAAAGAGAGATCAGCCAAAATTACAAGTCTGCCACCTCCTCCTCCAACTCTTTTTGAGAACAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 90 bp | TTGGAATCTCACGATGACTTGAGGGAAGAGTATCATTACTTTTGGTaGGGAAAGACTTCTGGGTTCTTTCAGAGTCAGCAACAGGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LESHDDLREEYHYFW*GKTSGFFQSQQQAP Trigger: AGGTGCCTGTTGCTGACTCTGAAAGAACCCAGAAGTCTTTCCCAACCAAAAGTAATGATACTCTTCCCTCAAGTCATCGTGAGATTCCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CCA 72 bp | ACTGCTGTAGGAAACTCAAAGACCCATCCTGAGATATaGGGATGTCAGATTGGCATGAAACAAGTCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: TAVGNSKTHPEI*GCQIGMKQVLS Trigger: AGAAAGGACTTGTTTCATGCCAATCTGACATCCCCATATCTCAGGATGGGTCTTTGAGTTTCCTACAGCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | GTTGGTGAAGATTCCTGGATTCTCCCCAAATCTGCTTaGGCAGAAGGCAATAAAGCAGATGAATCTGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: VGEDSWILPKSA*AEGNKADESGV Trigger: AACTCCAGATTCATCTGCTTTATTGCCTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | GTGAGCTCCAACATGAGCCAAGTTAGTGTCAGGTTGTaGATTCGGACTTGTGTTAAGAGAAGAATGCATGCT | + |
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Preference number: 6 (lower is better) Translates to: VSSNMSQVSVRL*IRTCVKRRMHA Trigger: AGCATGCATTCTTCTCTTAACACAAGTCCGAATCAACAACCTGACACTAACTTGGCTCATGTTGGAGCTCAC 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000325212.11 ENST00000529185.1 ENST00000531404.1 ENST00000531700.5 |
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| CDS CAA 90 bp | TTATTCTTGGTTGGTGAAGATTCCTGGATTCTCCCCAAATCTGCTTaGGCAGAAGGCAATAAAGCAGATGAATCTGGAGTTACCAAGGGA | + |
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Preference number: 6 (lower is better) Translates to: LFLVGEDSWILPKSA*AEGNKADESGVTKG Trigger: TCCCTTGGTAACTCCAGATTCATCTGCTTTATTGCCTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAACCAAGAATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 90 bp | GTGAGATCACATGATGGTCTGAGGAAACTGCAATATTATTCTTGGTaGGTGAAGATTCCTGGATTCTCCCCAAATCTGCTTTGGCAGAAG | + |
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Preference number: 6 (lower is better) Translates to: VRSHDGLRKLQYYSW*VKIPGFSPNLLWQK Trigger: CTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAACCAAGAATAATATTGCAGTTTCCTCAGACCATCATGTGATCTCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 90 bp | CATCTTGGGATCTTAGGATGGCTTAAGGGAATGGTACTGTCACTCTaGATTGATATACATTCCTGGAATCTCTCAGATTCATCCACCTGG | + |
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Preference number: 6 (lower is better) Translates to: HLGILGWLKGMVLSL*IDIHSWNLSDSSTW Trigger: CCAGGTGGATGAATCTGAGAGATTCCAGGAATGTATATCAATCAAGAGTGACAGTACCATTCCCTTAAGCCATCCTAAGATCCCAAGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | TTGGTGAAGATTCCTGGATTCTCCCCAAATCTGCTTTaGCAGAAGGCAATAAAGCAGATGAATCTGGAGTTA | + |
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Preference number: 6 (lower is better) Translates to: LVKIPGFSPNLL*QKAIKQMNLEL Trigger: TAACTCCAGATTCATCTGCTTTATTGCCTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | GGAATGGTACTGTCACTCTTGATTGATATACATTCCTaGAATCTCTCAGATTCATCCACCTGGGAAAGGGAT | + |
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Preference number: 6 (lower is better) Translates to: GMVLSLLIDIHS*NLSDSSTWERD Trigger: ATCCCTTTCCCAGGTGGATGAATCTGAGAGATTCCAGGAATGTATATCAATCAAGAGTGACAGTACCATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | CCTGTGATATTAGCTGCCTGTCATGTGACAAAGCCCTaGAAAGTGTCTCAGAATCTTTGGGGACCAATTTAT | + |
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Preference number: 6 (lower is better) Translates to: PVILAACHVTKP*KVSQNLWGPIY Trigger: ATAAATTGGTCCCCAAAGATTCTGAGACACTTTCAAGGGCTTTGTCACATGACAGGCAGCTAATATCACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | CACGATGACTTGAGGGAAGAGTATCATTACTTTTGGTaGGGAAAGACTTCTGGGTTCTTTCAGAGTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: HDDLREEYHYFW*GKTSGFFQSQQ Trigger: TTGCTGACTCTGAAAGAACCCAGAAGTCTTTCCCAACCAAAAGTAATGATACTCTTCCCTCAAGTCATCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 72 bp | GCAAAAGGTAGTGGAATAAACGAATGCTCTGTTTCCTaGGGTAGAAACAAAGAGGGGATAGTATGCTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: AKGSGINECSVS*GRNKEGIVCSA Trigger: TGCTGAGCATACTATCCCCTCTTTGTTTCTACCCAAGGAAACAGAGCATTCGTTTATTCCACTACCTTTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 72 bp | ACTGTGAGCTCCAACATGAGCCAAGTTAGTGTCAGGTaGTTGATTCGGACTTGTGTTAAGAGAAGAATGCAT | + |
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Preference number: 6 (lower is better) Translates to: TVSSNMSQVSVR*LIRTCVKRRMH Trigger: ATGCATTCTTCTCTTAACACAAGTCCGAATCAACAACCTGACACTAACTTGGCTCATGTTGGAGCTCACAGT 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000325212.11 ENST00000529185.1 ENST00000531404.1 ENST00000531700.5 |
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| CDS TCA 72 bp | CAGATGCTCACCACTTTGCTTGGCACTAGTATCTTCTaGAGCCAAATGATTATCATCAGAGTTGTTCCTATC | + |
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Preference number: 6 (lower is better) Translates to: QMLTTLLGTSIF*SQMIIIRVVPI Trigger: GATAGGAACAACTCTGATGATAATCATTTGGCTTCAGAAGATACTAGTGCCAAGCAAAGTGGTGAGCATCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | CATGTGACAAAGCCCTTGAAAGTGTCTCAGAATCTTTaGGGACCAATTTATAGTCTCTCTGTTGTGTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: HVTKPLKVSQNL*GPIYSLSVVFQ Trigger: CTGAAACACAACAGAGAGACTATAAATTGGTCCCCAAAGATTCTGAGACACTTTCAAGGGCTTTGTCACATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | AGCAAAGGCCTATCATGCATTTGGCTGATTATAGAATaGCTTGTGGAAACTGTACTTTTGCTCATGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SKGLSCIWLIIE*LVETVLLLMAE Trigger: TTCAGCCATGAGCAAAAGTACAGTTTCCACAAGCCATTCTATAATCAGCCAAATGCATGATAGGCCTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | ATATTCTCTGACGGCAGCAAAGGCCTATCATGCATTTaGCTGATTATAGAATGGCTTGTGGAAACTGTACTT | + |
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Preference number: 6 (lower is better) Translates to: IFSDGSKGLSCI*LIIEWLVETVL Trigger: AAGTACAGTTTCCACAAGCCATTCTATAATCAGCCAAATGCATGATAGGCCTTTGCTGCCGTCAGAGAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | GAAACTGCAATATTATTCTTGGTTGGTGAAGATTCCTaGATTCTCCCCAAATCTGCTTTGGCAGAAGGCAAT | + |
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Preference number: 6 (lower is better) Translates to: ETAILFLVGEDS*ILPKSALAEGN Trigger: ATTGCCTTCTGCCAAAGCAGATTTGGGGAGAATCCAGGAATCTTCACCAACCAAGAATAATATTGCAGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | CAAGATGTGATAAACCCAACAGCCCATCAGGCAATGTaGGTATCTCTGAGTGACCTGAGGATACTATATTAT | + |
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Preference number: 6 (lower is better) Translates to: QDVINPTAHQAM*VSLSDLRILYY Trigger: ATAATATAGTATCCTCAGGTCACTCAGAGATACCAACATTGCCTGATGGGCTGTTGGGTTTATCACATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 90 bp | AGACAGTTCTTCCTGGGGTTTCTCATAAGAATACATCACTTCCCTTaGTGCATCCAATTGTGCTGTCATATTATCTTGCTGAGGCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RQFFLGFLIRIHHFP*CIQLCCHIILLRQN Trigger: ATTCTGCCTCAGCAAGATAATATGACAGCACAATTGGATGCACAAAGGGAAGTGATGTATTCTTATGAGAAACCCCAGGAAGAACTGTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 90 bp | TTAGCTTCTGCAAAAGGTAGTGGAATAAACGAATGCTCTGTTTCCTaGGGTAGAAACAAAGAGGGGATAGTATGCTCAGCAGATTCACTT | + |
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Preference number: 6 (lower is better) Translates to: LASAKGSGINECSVS*GRNKEGIVCSADSL Trigger: AAGTGAATCTGCTGAGCATACTATCCCCTCTTTGTTTCTACCCAAGGAAACAGAGCATTCGTTTATTCCACTACCTTTTGCAGAAGCTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 90 bp | CTTCAAAGTCTCTTCATGTTTCTGTATCTGCTGCTGCAATGCTGTTaGTCTCTGTACAAGCAATTTTTCCTGGGCTTTCTGGCTATAATG | + |
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Preference number: 6 (lower is better) Translates to: LQSLFMFLYLLLQCC*SLYKQFFLGFLAIM Trigger: CATTATAGCCAGAAAGCCCAGGAAAAATTGCTTGTACAGAGACAAACAGCATTGCAGCAGCAGATACAGAAACATGAAGAGACTTTGAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS TCA 72 bp | CTGCCTATGACTATCTTCATCAGAAATTACAGGGCATaGTGCTGGAGCAATGCCAACCAAATGATTTATGTA | + |
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Preference number: 6 (lower is better) Translates to: LPMTIFIRNYRA*CWSNANQMIYV Trigger: TACATAAATCATTTGGTTGGCATTGCTCCAGCATCATGCCCTGTAATTTCTGATGAAGATAGTCATAGGCAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000531700.5 ENST00000531877.1 |
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| CDS TCA 72 bp | ACCTGGTTTACCACTTTGCTTGGCACTAGTATCTTCTaGAGCCAAATGATTATCATCAGAGTTGTTCCTATC | + |
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Preference number: 6 (lower is better) Translates to: TWFTTLLGTSIF*SQMIIIRVVPI Trigger: GATAGGAACAACTCTGATGATAATCATTTGGCTTCAGAAGATACTAGTGCCAAGCAAAGTGGTAAACCAGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000530425.1 ENST00000531700.5 |
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| CDS GCA 72 bp | GTTTCAGATATTTTTCTAGCATCCTGTGATATTAGCTaGCTGTCATGTGACAAAGCCCTTGAAAGTGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: VSDIFLASCDIS*LSCDKALESVS Trigger: TGAGACACTTTCAAGGGCTTTGTCACATGACAGGCAGCTAATATCACAGGATGCTAGAAAAATATCTGAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS GCA 72 bp | GCTGGTGACTCTACTTCTTGTATAGCACTAAGTTCATaGTGGTTTAAGTCCAAACCACATTTGACTTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGDSTSCIALSS*WFKSKPHLTFA Trigger: AGCAAAAGTCAAATGTGGTTTGGACTTAAACCAGCATGAACTTAGTGCTATACAAGAAGTAGAGTCACCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | TTCTTGTTCTTTTCCAGAGTTTGTACCACACGAAAGTaGTTTATCTTCACTAGCAAGTGGTCCAGACTCAAT | + |
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Preference number: 6 (lower is better) Translates to: FLFFSRVCTTRK*FIFTSKWSRLN Trigger: ATTGAGTCTGGACCACTTGCTAGTGAAGATAAACCACTTTCGTGTGGTACAAACTCTGGAAAAGAACAAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000531877.1 |
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| CDS CAA 72 bp | GTATTACCCTTTGTATTTGTGACTGTTCTTGGAGTATaGTCAAATTTTCTTGCTGTGCCAGGCTATGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: VLPFVFVTVLGV*SNFLAVPGYAV Trigger: CACAGCATAGCCTGGCACAGCAAGAAAATTTGACAATACTCCAAGAACAGTCACAAATACAAAGGGTAATAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | CTCATAAGAATACATCACTTCCCTTTGTGCATCCAATaGTGCTGTCATATTATCTTGCTGAGGCAGAATAGG | + |
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Preference number: 6 (lower is better) Translates to: LIRIHHFPLCIQ*CCHIILLRQNR Trigger: CCTATTCTGCCTCAGCAAGATAATATGACAGCACAATTGGATGCACAAAGGGAAGTGATGTATTCTTATGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 72 bp | TTCCTGGGGTTTCTCATAAGAATACATCACTTCCCTTaGTGCATCCAATTGTGCTGTCATATTATCTTGCTG | + |
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Preference number: 6 (lower is better) Translates to: FLGFLIRIHHFP*CIQLCCHIILL Trigger: CAGCAAGATAATATGACAGCACAATTGGATGCACAAAGGGAAGTGATGTATTCTTATGAGAAACCCCAGGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 72 bp | TTTGTTTCCTCTTCTTTACTGGTGGTAGATTCTTGCTaGCTATCATCCATGTGCTCTGAAAATGACTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: FVSSSLLVVDSC*LSSMCSENDSG Trigger: TCCAGAGTCATTTTCAGAGCACATGGATGATAGCAAGCAAGAATCTACCACCAGTAAAGAAGAGGAAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000531700.5 |
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| CDS CAA 90 bp | CTAAAGCTTGATTGGTTAAAATATCTGAAGCGCGTAATGTTTCTGTaGTTTCCACCTGTCTTTGTGGAAAGTGATTTTGTCTCGCTACCT | + |
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Preference number: 6 (lower is better) Translates to: LKLDWLKYLKRVMFL*FPPVFVESDFVSLP Trigger: AGGTAGCGAGACAAAATCACTTTCCACAAAGACAGGTGGAAACAACAGAAACATTACGCGCTTCAGATATTTTAACCAATCAAGCTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS GCA 72 bp | CTGGGTTTTCTCAATAGAAGGAAGGAAATCTGTCTGTaGATGCAAGTGTTCTTCAAGTGCAATCAAATTATC | + |
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Preference number: 6 (lower is better) Translates to: LGFLNRRKEICL*MQVFFKCNQII Trigger: GATAATTTGATTGCACTTGAAGAACACTTGCATGCACAGACAGATTTCCTTCCTTCTATTGAGAAAACCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS GCA 72 bp | ATAAGAATACATCACTTCCCTTTGTGCATCCAATTGTaGTGTCATATTATCTTGCTGAGGCAGAATAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: IRIHHFPLCIQL*CHIILLRQNRL Trigger: AAGCCTATTCTGCCTCAGCAAGATAATATGACAGCACAATTGGATGCACAAAGGGAAGTGATGTATTCTTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS GCA 72 bp | TCTGTTTCCTTGGGTAGAAACAAAGAGGGGATAGTATaGTCAGCAGATTCACTTTTGTTCAACTTTCTTTGT | + |
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Preference number: 6 (lower is better) Translates to: SVSLGRNKEGIV*SADSLLFNFLC Trigger: ACAAAGAAAGTTGAACAAAAGTGAATCTGCTGAGCATACTATCCCCTCTTTGTTTCTACCCAAGGAAACAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CCA 72 bp | GGTGACTCTACTTCTTGTATAGCACTAAGTTCATGCTaGTTTAAGTCCAAACCACATTTGACTTTTGCTACA | + |
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Preference number: 6 (lower is better) Translates to: GDSTSCIALSSC*FKSKPHLTFAT Trigger: TGTAGCAAAAGTCAAATGTGGTTTGGACTTAAACCAGCATGAACTTAGTGCTATACAAGAAGTAGAGTCACC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | ATCTTAGGATGGCTTAAGGGAATGGTACTGTCACTCTaGATTGATATACATTCCTGGAATCTCTCAGATTCA | + |
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Preference number: 6 (lower is better) Translates to: ILGWLKGMVLSL*IDIHSWNLSDS Trigger: TGAATCTGAGAGATTCCAGGAATGTATATCAATCAAGAGTGACAGTACCATTCCCTTAAGCCATCCTAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CAA 72 bp | AAAGTCTATCCTGTAATCTTGGAATCTCACGATGACTaGAGGGAAGAGTATCATTACTTTTGGTTGGGAAAG | + |
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Preference number: 6 (lower is better) Translates to: KVYPVILESHDD*REEYHYFWLGK Trigger: CTTTCCCAACCAAAAGTAATGATACTCTTCCCTCAAGTCATCGTGAGATTCCAAGATTACAGGATAGACTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000325212.11 ENST00000530425.1 |
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| CDS CAA 72 bp | TTTGTTTCCTCTTCTTTACTGGTGGTAGATTCTTGCTaGCTATCATCCATGTGCTCTGAAAATGACTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: FVSSSLLVVDSC*LSSMCSENDSE Trigger: TTCAGAGTCATTTTCAGAGCACATGGATGATAGCAAGCAAGAATCTACCACCAGTAAAGAAGAGGAAACAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531404.1 |
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| CDS TCA 72 bp | GAGAATTGCCTTAGATGTTCTTGTGATTCTAAAGCTTaGTTGGTTAAAATATCTGAAGCGCGTAATGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ENCLRCSCDSKA*LVKISEARNVS Trigger: AGAAACATTACGCGCTTCAGATATTTTAACCAATCAAGCTTTAGAATCACAAGAACATCTAAGGCAATTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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| CDS CCA 72 bp | ATTGCCTTAGATGTTCTTGTGATTCTAAAGCTTGATTaGTTAAAATATCTGAAGCGCGTAATGTTTCTGTTG | + |
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Preference number: 6 (lower is better) Translates to: IALDVLVILKLD*LKYLKRVMFLL Trigger: CAACAGAAACATTACGCGCTTCAGATATTTTAACCAATCAAGCTTTAGAATCACAAGAACATCTAAGGCAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000325212.11 |
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