RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP290 (Homo sapiens)

Ensembl gene IDs: ENSG00000198707

Ensembl transcript IDs: ENST00000309041.12, ENST00000397838.8, ENST00000547926.7, ENST00000550962.6, ENST00000552770.3, ENST00000552810.6, ENST00000671822.2, ENST00000672414.2, ENST00000673058.2, ENST00000674889.1, ENST00000674971.1, ENST00000675089.1, ENST00000675230.1, ENST00000675361.1, ENST00000675408.1, ENST00000675476.1, ENST00000675559.1, ENST00000675628.1, ENST00000675794.1, ENST00000675833.1, ENST00000675894.1, ENST00000676074.1, ENST00000676181.1, ENST00000676190.1, ENST00000676331.1, ENST00000676351.1, ENST00000676363.1, ENST00000676418.1, ENST00000676448.1

Found 819 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACTGTGCCTGATAGTCTAGCAGTTGCA +
Preference number: 1 (lower is better)
Translates to: PHSVEERHYVGATWQ*ATFHQTVPDSLAVA
Trigger: TGCAACTGCTAGACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
3UTR TCA 90 bp TGTTGTGCCAAGGGTAAAGCTCCACTAAACTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGTTTTGCTCTGTTTCTTCCCTCCAAA +
Preference number: 1 (lower is better)
Translates to: CCAKGKAPLNCRRRD*IVWRRCFALFLPSK
Trigger: TTTGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAACAATTCAGTCTCTACGACGACAGTTTAGTGGAGCTTTACCCTTGGCACAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 90 bp GATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTT +
Preference number: 1 (lower is better)
Translates to: DVIDSNLPRAVASLS*RETLCWCNLAMSDF
Trigger: AAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
3UTR GCA 90 bp TCTTGTTCTGCTACTGTCTGTTCCATCTCAGCCAGACGAATAAAATaGTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTCATTAAATCC +
Preference number: 1 (lower is better)
Translates to: SCSATVCSISARRIK*LLVGTGVGDCFIKS
Trigger: GGATTTAATGAAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAGATGGAACAGACAGTAGCAGAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR CCA 90 bp AGTGCCCGACTAAGTGCTTTCTGTTGTTTCTCCTTCAAGGCTAATTaGCTCTTTAGCCGTTCTACTAGATTTCTCATTGTAGTTGTTGGA +
Preference number: 1 (lower is better)
Translates to: SARLSAFCCFSFKAN*LFSRSTRFLIVVVG
Trigger: TCCAACAACTACAATGAGAAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAAAGCACTTAGTCGGGCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 90 bp ATTATTCGAATGTTCTCCTTAATTTTCCTTAGAGCGATCTCAAGTTaGTTTGGAAGGGGCAAACTAGGGTCAGGGATTGATCCTGTAGCT +
Preference number: 1 (lower is better)
Translates to: IIRMFSLIFLRAISS*FGRGKLGSGIDPVA
Trigger: AGCTACAGGATCAATCCCTGACCCTAGTTTGCCCCTTCCAAATCAACTTGAGATCGCTCTAAGGAAAATTAAGGAGAACATTCGAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR GCA 90 bp TCTCTAATTCTAGAATCCGTTGCCTATCAGCATCACTTACTGCCTTaGTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCT +
Preference number: 1 (lower is better)
Translates to: SLILESVAYQHHLLP*SHYQLIHLLTSVPP
Trigger: AGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGCTGATAGGCAACGGATTCTAGAATTAGAGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 90 bp AAGGAGATGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTaGACAAGCATATTATCTTTTTGCAAGATGTCCCTGTACTTAGCA +
Preference number: 1 (lower is better)
Translates to: KEMFSHSRCSKLLVL*TSILSFCKMSLYLA
Trigger: TGCTAAGTACAGGGACATCTTGCAAAAAGATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACATCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 90 bp ATTTCTTTTGTATATTGTTCTACTTGTTCGGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATACCCTGCTGTAGAGCCATAACATTA +
Preference number: 1 (lower is better)
Translates to: ISFVYCSTCSVSILI*LSRSCIPCCRAITL
Trigger: TAATGTTATGGCTCTACAGCAGGGTATACAGGAACGAGACAGTCAAATTAAGATGCTCACCGAACAAGTAGAACAATATACAAAAGAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR CAA 90 bp TCTGCTACTGTCTGTTCCATCTCAGCCAGACGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGAGACTGTTTCATTAAATCCCAAGCC +
Preference number: 2 (lower is better)
Translates to: SATVCSISARRIKCL*VGTGVGDCFIKSQA
Trigger: GGCTTGGGATTTAATGAAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAGATGGAACAGACAGTAGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 2 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGATTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 2 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGACATCACTTACTGCCTTaGTCACACTATCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRHHLLP*SHYQLI
Trigger: AATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATG...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTATCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR-3UTR CCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCGATCAGCATCAGGTATaGTGCTTTCAGCTCCACTTT +
Preference number: 2 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCDQHQV*CFQLHF
Trigger: AAAGTGGAGCTGAAAGCACCATACCTGATGCTGATC...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR CAA 90 bp TGTTCTGCTACTGTCTGTTCCATCTCAGCCAGACGAATAAAATGCTaGTTGGTAGGAACTGGAGTGGGAGACTGTTTCATTAAATCCCAA +
Preference number: 2 (lower is better)
Translates to: CSATVCSISARRIKC*LVGTGVGDCFIKSQ
Trigger: TTGGGATTTAATGAAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAGATGGAACAGACAGTAGCAGAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCACAGCATCAGGTATGGTaGTTTCAGCTCCACTTTGGT +
Preference number: 2 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPQHQVW*FQLHFG
Trigger: ACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTG...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR CCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTGATCAGCATCAGGTATaGTGCTTTCAGCTCCACTTT +
Preference number: 2 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSDQHQV*CFQLHF
Trigger: AAAGTGGAGCTGAAAGCACCATACCTGATGCTGATC...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR CCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 2 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
3UTR-3UTR TCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 2 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTACATCAGGATCTTTCTaGATTTCCTTAATTGCTTGC +
Preference number: 2 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFTSGSF*ISLIAC
Trigger: GCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGT...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR CAA 90 bp TTCTCTAATTCTAGAATCCGTTGCCTATCAGCATCACTTACTGCCTaGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACC +
Preference number: 2 (lower is better)
Translates to: FSNSRIRCLSASLTA*LTLSANSSLNICST
Trigger: GGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGCTGATAGGCAACGGATTCTAGAATTAGAGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: ELMILALDGAIPSGKSIPFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAACTTTCCGAGATTCCCTaGGCTCCTGTCTTAATTCTT +
Preference number: 2 (lower is better)
Translates to: MILALDGAIPSGKSIPLKLSEIP*APVLIL
Trigger: AAGAATTAAGACAGGAGCTCAGGGAATCTCGGAAAG...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATTCATCCGAATCCATCTaGAGAGCATTGAGCAAATTA +
Preference number: 2 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDSSESI*RALSKL
Trigger: TAATTTGCTCAATGCTCTTCAGATGGATTCGGATGA...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 2 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGG +
Preference number: 2 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDVASLS*RETLCW
Trigger: CCAACATAATGTCTCTCTTCAACTGAGTGAGGCTAC...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGT +
Preference number: 2 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSCRRRD*IVWRRC
Trigger: ACATCTGCGCCAAACAATTCAGTCTCTACGACGACA...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGCAATGTTCAGCCCGCTaGCTTTCATTTAATTCCTTC +
Preference number: 2 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWQCSAR*LSFNSF
Trigger: GAAGGAATTAAATGAAAGGCAGCGGGCTGAACATTG...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 2 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TTTTTCTGTGCCTTTGGTCTTGGATTCATAGTGCATGCTCAACTGATGCCCAAGTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: FFCAFGLGFIVHAQLMPKWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...CTTGGGCATCAGTTGAGCATGCACTATGAATCCAAGACCAAAGGCACAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR CCA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGCTTTCAGCTCCACTTTaGTCCTTGTTAGCTTCTATC +
Preference number: 2 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWLSAPL*SLLASI
Trigger: GATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAG...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR CAA 90 bp AGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGACAGTATATTTTGTTCTGCTAACCTT +
Preference number: 2 (lower is better)
Translates to: SFSLSAVAGNRSLSS*ITLSLDSIFCSANL
Trigger: AAGGTTAGCAGAACAAAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR CAA 90 bp AGTATGTCGATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTaGAGAAGTTGCAGAAATAATACGTTCTTCAGCAGCTGCTGTCAT +
Preference number: 2 (lower is better)
Translates to: SMSINDLLNIEMGLF*RSCRNNTFFSSCCH
Trigger: ATGACAGCAGCTGCTGAAGAACGTATTATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGATCGACATACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTCAATGTTCAGCCCGCTaGCTTTCATTTAATTCCTTC +
Preference number: 2 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFQCSAR*LSFNSF
Trigger: GAAGGAATTAAATGAAAGGCAGCGGGCTGAACATTG...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTTGGCGCAGATGTTTTaGTCTGTTTCTTCCCTCCAA +
Preference number: 2 (lower is better)
Translates to: VSLLVICKLPVFLELFECLAQMF*SVSSLQ
Trigger: TTGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAA...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATAAGTGCCCGACTAAGTaGTTTCTGTTGTTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDKCPTK*FLLFLL
Trigger: AAGGAGAAACAACAGAAAGCACTTAGTCGGGCACTT...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTTCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 2 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
3UTR-3UTR TCA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTGCATCTTGTTGGACTTaGTCCTCAAGTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFASCWT*SSSFLF
Trigger: AAAGAGAAAACTTGAGGATCAAGTCCAACAAGATGC...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCAAACTTTTTGGAGAGCTaGAATCTTGAAAATGGCCAT +
Preference number: 2 (lower is better)
Translates to: LLTLSANSSLNICSTFCANFLES*NLENGH
Trigger: ATGGCCATTTTCAAGATTGCAGCTCTCCAAAAAGTT...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 2 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATTCTCTTCTAGTGATTTaGAAGTTGCCCGTGTTTCTA +
Preference number: 2 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDSLLVI*KLPVFL
Trigger: TAGAAACACGGGCAACTTGCAAATCACTAGAAGAGA...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CCA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTCTTTCAGCTCCACTTTaGTCCTTGTTAGCTTCTATC +
Preference number: 2 (lower is better)
Translates to: QLITFWAPLVSFKVLINSLSAPL*SLLASI
Trigger: GATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAG...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR CCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 2 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFRETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATTCAAAAATGTCTAGTTaGCGTTCCAGGTCAACTTCT +
Preference number: 2 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDSKMSS*RSRSTS
Trigger: AGAAGTTGACCTGGAACGCCAACTAGACATTTTTGA...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTCTAGATCTGACATTTTaGGCTGTGTCTCTAGATCTT +
Preference number: 2 (lower is better)
Translates to: VSLLVICKLPVFLELFECLDLTF*AVSLDL
Trigger: AAGATCTAGAGACACAGCTCAAAATGTCAGATCTAG...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR TCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATGCATCTTGTTGGACTTaGTCCTCAAGTTTTCTCTTT +
Preference number: 2 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNASCWT*SSSFLF
Trigger: AAAGAGAAAACTTGAGGATCAAGTCCAACAAGATGC...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTACTTGGGCTTTCAAATaGAGACTCGCATCAAAGATT +
Preference number: 2 (lower is better)
Translates to: VSLLVICKLPVFLELFECTWAFK*RLASKI
Trigger: AATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGT...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR GCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATCATCACTTACTGCCTTaGTCACACTATCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNHHLLP*SHYQLI
Trigger: AATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATG...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCCATCACTTACTGCCTTaGTCACACTATCAGCTAATT +
Preference number: 2 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFHHLLP*SHYQLI
Trigger: AATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATG...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 2 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATGACTCCTTTTGTGACTaGTCCAGAAGATACTTTAAA +
Preference number: 2 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDDSFCD*SRRYFK
Trigger: TTTAAAGTATCTTCTGGACCAGTCACAAAAGGAGTC...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR CAA 90 bp CAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATCTTTTaGCAAGATGTCCCTGTACTTAGCAGTCAGTTCATTGTACTGTTT +
Preference number: 2 (lower is better)
Translates to: QVFQVTCSLNKHIIF*QDVPVLSSQFIVLF
Trigger: AAACAGTACAATGAACTGACTGCTAAGTACAGGGACATCTTGCAAAAAGATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR TCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATGCTTGTTCAATAGTGTaGAGTTTTTCCTTGGTAATC +
Preference number: 2 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNACSIV*SFSLVI
Trigger: GATTACCAAGGAAAAACTTCACACTATTGAACAAGC...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR GCA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTACATCAGGATCTTTCTaGATTTCCTTAATTGCTTGC +
Preference number: 2 (lower is better)
Translates to: QLITFWAPLVSFKVLINSTSGSF*ISLIAC
Trigger: GCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGT...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR GCA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTAATTCTAGAATCCGTTaGCTATCAGCATCACTTACT +
Preference number: 2 (lower is better)
Translates to: QLITFWAPLVSFKVLINSNSRIR*LSASLT
Trigger: AGTAAGTGATGCTGATAGGCAACGGATTCTAGAATT...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 2 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTTTTCTGTGCCTTTGGTCTTGGATTCATAGTGCATGCTCAACTGATGCCCAAGATCTCGAGGAAGAGCTaGGTGGGCCCTCATATACAA +
Preference number: 3 (lower is better)
Translates to: FFCAFGLGFIVHAQLMPKISRKS*VGPHIQ
Trigger: TTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGAT...CTTGGGCATCAGTTGAGCATGCACTATGAATCCAAGACCAAAGGCACAGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR GCA 72 bp GCTACTGTCTGTTCCATCTCAGCCAGACGAATAAAATaGTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTC +
Preference number: 3 (lower is better)
Translates to: ATVCSISARRIK*LLVGTGVGDCF
Trigger: GAAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAGATGGAACAGACAGTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 3 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTAAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 3 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLRVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR TCA 72 bp GTTGTAGGCCTCCATCTTCTGCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGCAGTAGCCTCACTCAG +
Preference number: 3 (lower is better)
Translates to: VVGLHLLQFRCN*LQLTKSSSLTQ
Trigger: CTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGCCTACAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTTGGAGAGCTGCAATCTaGAAAATGGCCATTTCCTTA +
Preference number: 3 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFWRAAI*KMAISL
Trigger: TAAGGAAATGGCCATTTTCAAGATTGCAGCTCTCCA...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTTCTAGATCTGACATTTaGAGCTGTGTCTCTAGATCT +
Preference number: 3 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFSRSDI*SCVSRS
Trigger: AGATCTAGAGACACAGCTCAAAATGTCAGATCTAGA...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGATTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 3 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGCAGGTCAACTTCTCTTaGATCCCAGGCCATTTGTCT +
Preference number: 3 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWQVNFS*IPGHLS
Trigger: AGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTG...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTATGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR-3UTR CAA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTACTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 3 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR-3UTR CAA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTATCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 3 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR TCA 72 bp AGCTCCTGTCTTAATTCTTCATTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAATGCAGACTCGCATCA +
Preference number: 3 (lower is better)
Translates to: SSCLNSSFLPVS*STWAFKCRLAS
Trigger: TGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAATTAAGACAGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR TCA 72 bp GTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACTGTGCCTGATAGTCTA +
Preference number: 3 (lower is better)
Translates to: VEERHYVGATWQ*ATFHQTVPDSL
Trigger: TAGACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 3 (lower is better)
Translates to: ELMILALDGAIPSGKSIPGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATTGGAGAGCTGCAATCTaGAAAATGGCCATTTCCTTA +
Preference number: 3 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDWRAAI*KMAISL
Trigger: TAAGGAAATGGCCATTTTCAAGATTGCAGCTCTCCA...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGCGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGA +
Preference number: 3 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWRIKCL*VGTGVG
Trigger: TCCCACTCCAGTTCCTACCAACAAGCATTTTATTCG...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR GCA 72 bp CTAGAATCCGTTGCCTATCAGCATCACTTACTGCCTTaGTCACACTATCAGCTAATTCATCTCTTAACATCT +
Preference number: 3 (lower is better)
Translates to: LESVAYQHHLLP*SHYQLIHLLTS
Trigger: AGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGCTGATAGGCAACGGATTCTAG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 3 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAAGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 3 (lower is better)
Translates to: MILALDGAIPSGKSIPLKGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGTTCCTGTTCCCAGGCTaGTTCAATAGTGTGAAGTTT +
Preference number: 3 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWFLFPG*FNSVKF
Trigger: AAACTTCACACTATTGAACAAGCCTGGGAACAGGAA...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTGCATCACTTACTGCCTaGCTCACACTATCAGCTAAT +
Preference number: 3 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFASLTA*LTLSAN
Trigger: ATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGC...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTTTTCTGTGCCTTTGGTCTTGGATTCATAGTGCATGCTCAACTGATGCCCAAGTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 3 (lower is better)
Translates to: FFCAFGLGFIVHAQLMPKFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...CTTGGGCATCAGTTGAGCATGCACTATGAATCCAAGACCAAAGGCACAGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
3UTR-3UTR CAA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTTTTGGCGCAGATGTTTaGCTCTGTTTCTTCCCTCCA +
Preference number: 3 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSFGADV*LCFFPP
Trigger: TGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAA...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTGTCGTAGAGACTGAATaGTTTGGCGCAGATGTTTTG +
Preference number: 3 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFVVETE*FGADVL
Trigger: CAAAACATCTGCGCCAAACAATTCAGTCTCTACGAC...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATGGAAAGAGAGTCATCTaGTTCTGCTACTGTCTGTTC +
Preference number: 3 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDGKRVI*FCYCLF
Trigger: GAACAGACAGTAGCAGAACAAGATGACTCTCTTTCC...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATTCGATCAACGATTTGTaGAACATTGAGATGGGCCTC +
Preference number: 3 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDSINDL*NIEMGL
Trigger: GAGGCCCATCTCAATGTTCAACAAATCGTTGATCGA...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp AAAACATGGCTTACCCACACGCTCTCTAAGTGCCTCATTTTCATCAAGGAAATCTCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 3 (lower is better)
Translates to: KTWLTHTLSKCLIFIKEISVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...GATTTCCTTGATGAAAATGAGGCACTTAGAGAGCGTGTGGGTAAGCCATGTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR-3UTR CAA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTTGTCACTGTTGGTTATaGATTTCTTTGCCTTATCCA +
Preference number: 3 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETCHCWL*ISLPYP
Trigger: TGGATAAGGCAAAGAAATCAATAACCAACAGTGACA...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 3 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFLCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 72 bp TTTCTGCAGTGGCAGGCAATCGAAGCCTCAGTTCATTaGTTACTTTGTCTCTTGACAGTATATTTTGTTCTG +
Preference number: 3 (lower is better)
Translates to: FLQWQAIEASVH*LLCLLTVYFVL
Trigger: CAGAACAAAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGCCACTGCAGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCATACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 3 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCAGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 3 (lower is better)
Translates to: LNICSTFCASKLILVSSAGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATTTCTGTGCATCCAAATaGATTTTGGTAAGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDFCASK*ILVSSA
Trigger: TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAA...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 3 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATTTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 3 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNLCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 3 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
3UTR-3UTR CAA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 3 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR CCA 72 bp AGTTCAGATTTTAAACACTGTGACTCCTTTTGTGACTaGTCCAGAAGATACTTTAAATCCTCTACTTCCGCT +
Preference number: 3 (lower is better)
Translates to: SSDFKHCDSFCD*SRRYFKSSTSA
Trigger: AGCGGAAGTAGAGGATTTAAAGTATCTTCTGGACCAGTCACAAAAGGAGTCACAGTGTTTAAAATCTGAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTTCTGTGCATCCAAATaGATTTTGGTAAGCTCAGCA +
Preference number: 3 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFFCASK*ILVSSA
Trigger: TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 72 bp TTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTaGACAAGCATATTATCTTTTTGCAAGATGTCCCTG +
Preference number: 3 (lower is better)
Translates to: FSHSRCSKLLVL*TSILSFCKMSL
Trigger: CAGGGACATCTTGCAAAAAGATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 3 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTGCATCCAAATTGATTTaGGTAAGCTCAGCAAATTTG +
Preference number: 3 (lower is better)
Translates to: QLITFWAPLVSFKVLINSASKLI*VSSANL
Trigger: CAAATTTGCTGAGCTTACCAAAATCAATTTGGATGC...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 3 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 3 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 72 bp TGGGAGACTGTTTCATTAAATCCCAAGCCGTTTGTTTaGATTTATTTAGTGAACTATCAGCCTGTAGTTCTA +
Preference number: 3 (lower is better)
Translates to: WETVSLNPKPFV*IYLVNYQPVVL
Trigger: TAGAACTACAGGCTGATAGTTCACTAAATAAATTCAAACAAACGGCTTGGGATTTAATGAAACAGTCTCCCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR TCA 72 bp TGTAGAGCCATAACATTACTTTTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCCCTTAGGTTATGTAAC +
Preference number: 3 (lower is better)
Translates to: CRAITLLLSASS*AFLSFSLRLCN
Trigger: GTTACATAACCTAAGGGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAAAAGTAATGTTATGGCTCTACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMPQPPS*TRPRAL
Trigger: CAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYPGRGP*QIPIAV
Trigger: AACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMPGRGP*QIPIAV
Trigger: AACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCATCCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SVKSIIVFGSRPRRARSHPQPPS*TRPRAL
Trigger: CAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGG...ATGACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CCA 90 bp AAAACATGGCTTACCCACACGCTCTCTAAGTGCCTCATTTTCATCAAGGAAATCCCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KTWLTHTLSKCLIFIKEIPQPPS*TRPRAL
Trigger: CAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGG...GATTTCCTTGATGAAAATGAGGCACTTAGAGAGCGTGTGGGTAAGCCATGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR TCA 90 bp ATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCCCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTT +
Preference number: 4 (lower is better)
Translates to: IQLNQSLSLVQGLDGPEVPGRGP*QIPIAV
Trigger: AACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGG...GACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CCA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCACCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLTLSANSSLNICSTFCAPQPPS*TRPRAL
Trigger: CAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGG...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTCCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTT +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPPGRGP*QIPIAV
Trigger: AACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGG...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTAGCAATGTTCCAGCCCTaGCCACCCACCACTCCAACC +
Preference number: 4 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLAMFQP*PPTTPT
Trigger: GGTTGGAGTGGTGGGTGGGCAGGGCTGGAACATTGC...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTACCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLPQPPS*TRPRAL
Trigger: CAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGG...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATCCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTT +
Preference number: 4 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDPGRGP*QIPIAV
Trigger: AACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGG...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTCCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSLLVICKLPVFLELFECPQPPS*TRPRAL
Trigger: CAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGG...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTCCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CAAGGCCTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTCCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: QGLDGPEVIFRNFQILGCPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...ACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAGGCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTACCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR GCA 90 bp CTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGAGTATCTCGTCCACCTaGAGACTGCTGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: LDGPEVIFRNFQILGCDLSISST*RLLSHL
Trigger: GAGATGGCTCAGCAGTCTGCAGGTGGACGAGATACT...CAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCTGGGTCCAGCCAAATaGTCCCGAGCAAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRLGPAK*SRASQS
Trigger: GCTTTGGCTTGCTCGGGACCATTTGGCTGGACCCAG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGGGTCCAGCCAAATaGTCCCGAGCAAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLGPAK*SRASQS
Trigger: GCTTTGGCTTGCTCGGGACCATTTGGCTGGACCCAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCCTGGGTCCAGCCAAATaGTCCCGAGCAAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCLGPAK*SRASQS
Trigger: GCTTTGGCTTGCTCGGGACCATTTGGCTGGACCCAG...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp AAAACATGGCTTACCCACACGCTCTCTAAGTGCCTCATTTTCATCAAGGAAATCGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: KTWLTHTLSKCLIFIKEIVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...GATTTCCTTGATGAAAATGAGGCACTTAGAGAGCGTGTGGGTAAGCCATGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR TCA 90 bp TCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCATTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: SVKSIIVFGSRPRRARSHSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...ATGACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR TCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCACCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAGTATCTCGTCCACCTaGAGACTGCTGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGSISST*RLLSHL
Trigger: GAGATGGCTCAGCAGTCTGCAGGTGGACGAGATACT...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CCA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGACCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR TCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAGTATCTCGTCCACCTaGAGACTGCTGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSISST*RLLSHL
Trigger: GAGATGGCTCAGCAGTCTGCAGGTGGACGAGATACT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGACGTTCTTCAGCAGCTaGTGTCATTTCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMTFFSS*CHFCPE
Trigger: CTCCGGGCAGAAATGACAGCAGCTGCTGAAGAACGT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTACGTTCTTCAGCAGCTaGTGTCATTTCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCITFFSS*CHFCPE
Trigger: CTCCGGGCAGAAATGACAGCAGCTGCTGAAGAACGT...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATACGTTCTTCAGCAGCTaGTGTCATTTCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYTFFSS*CHFCPE
Trigger: CTCCGGGCAGAAATGACAGCAGCTGCTGAAGAACGT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCCTGGGTCCAGCCAAATaGTCCCGAGCAAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLLGPAK*SRASQS
Trigger: GCTTTGGCTTGCTCGGGACCATTTGGCTGGACCCAG...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTCTGGGTCCAGCCAAATaGTCCCGAGCAAGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVLGPAK*SRASQS
Trigger: GCTTTGGCTTGCTCGGGACCATTTGGCTGGACCCAG...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CCA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAAGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: MILALDGAIPSGKSIPLKVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAGTTCCACGCGGACTCTaGGTCCAGCCAAATGGTCCC +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLVPRGL*VQPNGP
Trigger: GGGACCATTTGGCTGGACCCAGAGTCCGCGTGGAAC...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TGTCTAACGTTGACTGAATTTTCATATGAGTCTGTTGAGAAAGGGTTGAAGCACCCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CLTLTEFSYESVEKGLKHPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...GTGCTTCAACCCTTTCTCAACAGACTCATATGAAAATTCAGTCAACGTTAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR TCA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATCCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCCCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGG +
Preference number: 4 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRVASLS*RETLCW
Trigger: CCAACATAATGTCTCTCTTCAACTGAGTGAGGCTAC...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCTGCCTAGCTCAGCTATaGGCTTTTCTCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGCLAQL*AFLFLQ
Trigger: CTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCA...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATAGTATCTCGTCCACCTaGAGACTGCTGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDSISST*RLLSHL
Trigger: GAGATGGCTCAGCAGTCTGCAGGTGGACGAGATACT...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTGAGCTTTTCTCTTTCTaGAGTGGCAGGCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFELFSF*SGRQSK
Trigger: CTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTC...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCACAAGCTGTGGACCTCTaGTTTCTGCAAACTGCAATC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAQAVDL*FLQTAI
Trigger: GATTGCAGTTTGCAGAAAGCAGAGGTCCACAGCTTG...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCACAGCATCAGGTATGGTaGTTTCAGCTCCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAQHQVW*FQLHFG
Trigger: ACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTG...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTCCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: QLITFWAPLVSFKVLINSPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATCCTCTAGACCAAGCCTaGCAACCAGCGGAGGCCTCT +
Preference number: 4 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNPLDQA*QPAEAS
Trigger: AGAGGCCTCCGCTGGTTGCCAGGCTTGGTCTAGAGG...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: LDGPEVIFRNFQILGCDLTGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...CAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CCA 90 bp GGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: GPEVIFRNFQILGCDLIVGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...GACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CCA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCTTTCTCTTTCTGCAGTaGCAGGCAATCGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVFLFLQ*QAIEAS
Trigger: TGAGGCTTCGATTGCCTGCCACTGCAGAAAGAGAAA...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CAAGGCCTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTATCAGAAGTCTAATTTaGGGTCCTAGCACAACCACA +
Preference number: 4 (lower is better)
Translates to: QGLDGPEVIFRNFQILGCIRSLI*GPSTTT
Trigger: TGTGGTTGTGCTAGGACCCCAAATTAGACTTCTGAT...ACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAGGCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR TCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGG +
Preference number: 4 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVVASLS*RETLCW
Trigger: CCAACATAATGTCTCTCTTCAACTGAGTGAGGCTAC...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYCRRRD*IVWRRC
Trigger: ACATCTGCGCCAAACAATTCAGTCTCTACGACGACA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRCRRRD*IVWRRC
Trigger: ACATCTGCGCCAAACAATTCAGTCTCTACGACGACA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMCRRRD*IVWRRC
Trigger: ACATCTGCGCCAAACAATTCAGTCTCTACGACGACA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAAGAGCGATCTCAAGTTaGTTTGGAAGGGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCARAISS*FGRGKL
Trigger: TAGTTTGCCCCTTCCAAATCAACTTGAGATCGCTCT...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGCCTAGCTCAGCTATaGGCTTTTCTCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMCLAQL*AFLFLQ
Trigger: CTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCACGTATTCCCAAAACCTaGTCAACAGTCATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCARIPKT*STVMPV
Trigger: AACTGGCATGACTGTTGATCAGGTTTTGGGAATACG...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGAGCTTTTCTCTTTCTaGAGTGGCAGGCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYELFSF*SGRQSK
Trigger: CTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGAGCTTTTCTCTTTCTaGAGTGGCAGGCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMELFSF*SGRQSK
Trigger: CTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAAAGTGCCCGACTAAGTaGTTTCTGTTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRKCPTK*FLLFLL
Trigger: AAGGAGAAACAACAGAAAGCACTTAGTCGGGCACTT...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCAAGCTGTGGACCTCTaGTTTCTGCAAACTGCAATC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMQAVDL*FLQTAI
Trigger: GATTGCAGTTTGCAGAAAGCAGAGGTCCACAGCTTG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCAAGCTGTGGACCTCTaGTTTCTGCAAACTGCAATC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYQAVDL*FLQTAI
Trigger: GATTGCAGTTTGCAGAAAGCAGAGGTCCACAGCTTG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCAGCATCAGGTATGGTaGTTTCAGCTCCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYQHQVW*FQLHFG
Trigger: ACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCAGCATCAGGTATGGTaGTTTCAGCTCCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMQHQVW*FQLHFG
Trigger: ACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCATGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAATCAATCATTGTCTTTaGTTCAAGGCCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAINHCL*FKAHTL
Trigger: GAGCGTGTGGGCCTTGAACCAAAGACAATGATTGAT...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674971.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000674971.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAGATCTCAAGTTGATTTaGAAGGGGCAAACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCADLKLI*KGQTRV
Trigger: GACCCTAGTTTGCCCCTTCCAAATCAACTTGAGATC...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGTTTCTCTTTCTGCAGTaGCAGGCAATCGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEFLFLQ*QAIEAS
Trigger: TGAGGCTTCGATTGCCTGCCACTGCAGAAAGAGAAA...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTTCTCTTTCTGCAGTaGCAGGCAATCGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFLFLQ*QAIEAS
Trigger: TGAGGCTTCGATTGCCTGCCACTGCAGAAAGAGAAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTTTCTCTTTCTGCAGTaGCAGGCAATCGAAGCCTCA +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFFLFLQ*QAIEAS
Trigger: TGAGGCTTCGATTGCCTGCCACTGCAGAAAGAGAAA...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGATCCTTCAAGGCTAATTaGCTCTTTAGCCGTTCTACT +
Preference number: 4 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRSFKAN*LFSRST
Trigger: AGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGA...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCTCGAGGAAGAGCTTaGTGGGCCCTCATATACAAT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSRGRA*WALIYN
Trigger: ATTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTCTCGAGGAAGAGCTTaGTGGGCCCTCATATACAAT +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFSRGRA*WALIYN
Trigger: ATTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGA...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGCACCTTCAAGCTGTaGACCTCTGCTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSTFKL*TSAFCK
Trigger: TTTGCAGAAAGCAGAGGTCCACAGCTTGAAGGTGCT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAGCACCTTCAAGCTGTaGACCTCTGCTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSTFKL*TSAFCK
Trigger: TTTGCAGAAAGCAGAGGTCCACAGCTTGAAGGTGCT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNSASSS*RGRSSG
Trigger: CCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTACCACCTGCAGACTGCTaGGCCATCTCCAGTTCATTT +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLPPADC*AISSSF
Trigger: AAATGAACTGGAGATGGCTCAGCAGTCTGCAGGTGG...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCTGTTGAGAAAGGGTTaGAGCACCTTTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: GPEVIFRNFQILGCDLIVLLRKG*STFVSL
Trigger: CAAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAG...GACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR TCA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCTTTCCGAGATTCCCTaGGCTCCTGTCTTAATTCTT +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRLSEIP*APVLIL
Trigger: AAGAATTAAGACAGGAGCTCAGGGAATCTCGGAAAG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTTTCCGAGATTCCCTaGGCTCCTGTCTTAATTCTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLSEIP*APVLIL
Trigger: AAGAATTAAGACAGGAGCTCAGGGAATCTCGGAAAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTTTCCGAGATTCCCTaGGCTCCTGTCTTAATTCTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLSEIP*APVLIL
Trigger: AAGAATTAAGACAGGAGCTCAGGGAATCTCGGAAAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGATCATCCGAATCCATCTaGAGAGCATTGAGCAAATTA +
Preference number: 4 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRSSESI*RALSKL
Trigger: TAATTTGCTCAATGCTCTTCAGATGGATTCGGATGA...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMVASLS*RETLCW
Trigger: CCAACATAATGTCTCTCTTCAACTGAGTGAGGCTAC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGG +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRVASLS*RETLCW
Trigger: CCAACATAATGTCTCTCTTCAACTGAGTGAGGCTAC...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGAGCGATCTCAAGTTaGTTTGGAAGGGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRAISS*FGRGKL
Trigger: TAGTTTGCCCCTTCCAAATCAACTTGAGATCGCTCT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGAGAGCGATCTCAAGTTaGTTTGGAAGGGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNERAISS*FGRGKL
Trigger: TAGTTTGCCCCTTCCAAATCAACTTGAGATCGCTCT...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCGATCAACGATTTGTTaGACATTGAGATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRSTIC*TLRWAS
Trigger: AGAGGCCCATCTCAATGTTCAACAAATCGTTGATCG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCGATCAACGATTTGTTaGACATTGAGATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRSTIC*TLRWAS
Trigger: AGAGGCCCATCTCAATGTTCAACAAATCGTTGATCG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCGTATTCCCAAAACCTaGTCAACAGTCATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRIPKT*STVMPV
Trigger: AACTGGCATGACTGTTGATCAGGTTTTGGGAATACG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAGTATCTCGTCCACCTaGAGACTGCTGAGCCATCTC +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLSISST*RLLSHL
Trigger: GAGATGGCTCAGCAGTCTGCAGGTGGACGAGATACT...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTGGCGCAGATGTTTTaGTCTGTTTCTTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLAQMF*SVSSLQ
Trigger: TTGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTGGCGCAGATGTTTTaGTCTGTTTCTTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLAQMF*SVSSLQ
Trigger: TTGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTATCTGTCAGGGGTTTaGCCTGTAATCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYYLSGV*PVIHWL
Trigger: TAACCAGTGGATTACAGGGCAAACCCCTGACAGATA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTATCTGTCAGGGGTTTaGCCTGTAATCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMYLSGV*PVIHWL
Trigger: TAACCAGTGGATTACAGGGCAAACCCCTGACAGATA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGTATCTGTCAGGGGTTTaGCCTGTAATCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEYLSGV*PVIHWL
Trigger: TAACCAGTGGATTACAGGGCAAACCCCTGACAGATA...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTACAGCATCAGGTATGGTaGTTTCAGCTCCACTTTGGT +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVQHQVW*FQLHFG
Trigger: ACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTG...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMTGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYTGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAATCATTGTCTTTaGTTCAAGGCCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRINHCL*FKAHTL
Trigger: GAGCGTGTGGGCCTTGAACCAAAGACAATGATTGAT...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTATCAATCATTGTCTTTaGTTCAAGGCCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCIINHCL*FKAHTL
Trigger: GAGCGTGTGGGCCTTGAACCAAAGACAATGATTGAT...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATATCAATCATTGTCTTTaGTTCAAGGCCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYINHCL*FKAHTL
Trigger: GAGCGTGTGGGCCTTGAACCAAAGACAATGATTGAT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATCAATCATTGTCTTTaGTTCAAGGCCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMINHCL*FKAHTL
Trigger: GAGCGTGTGGGCCTTGAACCAAAGACAATGATTGAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCARETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGATCTCAAGTTGATTTaGAAGGGGCAAACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYDLKLI*KGQTRV
Trigger: GACCCTAGTTTGCCCCTTCCAAATCAACTTGAGATC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTCCTTCAAGGCTAATTaGCTCTTTAGCCGTTCTACT +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCASFKAN*LFSRST
Trigger: AGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCGAGGAAGAGCTTGGTaGGCCCTCATATACAATATA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRGRAW*ALIYNI
Trigger: TATATTGTATATGAGGGCCCACCAAGCTCTTCCTCG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCGAGGAAGAGCTTGGTaGGCCCTCATATACAATATA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRGRAW*ALIYNI
Trigger: TATATTGTATATGAGGGCCCACCAAGCTCTTCCTCG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCTGTGCCTTTGGTCTTaGATTCATAGTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNELCLWS*IHSACS
Trigger: TGAGCATGCACTATGAATCCAAGACCAAAGGCACAG...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGTGCCTTTGGTCTTaGATTCATAGTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLCLWS*IHSACS
Trigger: TGAGCATGCACTATGAATCCAAGACCAAAGGCACAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCCTGTGCCTTTGGTCTTaGATTCATAGTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCLCLWS*IHSACS
Trigger: TGAGCATGCACTATGAATCCAAGACCAAAGGCACAG...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTGTGCCTTTGGTCTTaGATTCATAGTGCATGCTCA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLCLWS*IHSACS
Trigger: TGAGCATGCACTATGAATCCAAGACCAAAGGCACAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTAGCACCTTCAAGCTGTaGACCTCTGCTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETSTFKL*TSAFCK
Trigger: TTTGCAGAAAGCAGAGGTCCACAGCTTGAAGGTGCT...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCCTTTCAGCTCCACTTTaGTCCTTGTTAGCTTCTATC +
Preference number: 4 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVLSAPL*SLLASI
Trigger: GATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAG...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGATCAGCATCAGGTATaGTGCTTTCAGCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMDQHQV*CFQLHF
Trigger: AAAGTGGAGCTGAAAGCACCATACCTGATGCTGATC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGATCAGCATCAGGTATaGTGCTTTCAGCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYDQHQV*CFQLHF
Trigger: AAAGTGGAGCTGAAAGCACCATACCTGATGCTGATC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
3UTR CAA 72 bp ACTGTCTGTTCCATCTCAGCCAGACGAATAAAATGCTaGTTGGTAGGAACTGGAGTGGGAGACTGTTTCATT +
Preference number: 4 (lower is better)
Translates to: TVCSISARRIKC*LVGTGVGDCFI
Trigger: AATGAAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAGATGGAACAGACAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCATGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: SVKSIIVFGSRPRRARSHASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...ATGACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR TCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCALSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCTGTTGAGAAAGGGTTaGAGCACCTTTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRLLRKG*STFVSL
Trigger: CAAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTGTTGAGAAAGGGTTaGAGCACCTTTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLLRKG*STFVSL
Trigger: CAAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTGTTGAGAAAGGGTTaGAGCACCTTTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCILLRKG*STFVSL
Trigger: CAAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAG...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGQFRCN*LQLTKS
Trigger: GCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTG...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLCRRRD*IVWRRC
Trigger: ACATCTGCGCCAAACAATTCAGTCTCTACGACGACA...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTTTCATATGCCAGTTaGTTACCTTTTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAFSYAS*LPFGLL
Trigger: AAGGAGCCCAAAAGGTAATCAACTGGCATATGAAAA...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCCTTCTTCAAGACTGCTaGTTGTACGTTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVLLQDC*LYVHIQ
Trigger: CTGAATATGAACGTACAATCAGCAGTCTTGAAGAAG...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCTGCCTAGCTCAGCTATaGGCTTTTCTCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLCLAQL*AFLFLQ
Trigger: CTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCA...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCTGCCTAGCTCAGCTATaGGCTTTTCTCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFCLAQL*AFLFLQ
Trigger: CTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCA...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCGATTTGTTGAACATTaGGATGGGCCTCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRFVEH*DGPLFE
Trigger: CTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCGATCAACGATTTGTTaGACATTGAGATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSRSTIC*TLRWAS
Trigger: AGAGGCCCATCTCAATGTTCAACAAATCGTTGATCG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTACGTATTCCCAAAACCTaGTCAACAGTCATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVRIPKT*STVMPV
Trigger: AACTGGCATGACTGTTGATCAGGTTTTGGGAATACG...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTTTCCAATTCTTTTTCTaGCTCCAAAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFFQFFF*LQSSYS
Trigger: GGAATACGAGCTTTGGAGTCAGAAAAAGAATTGGAA...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCCTAGATCTGACATTTTaGGCTGTGTCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCALDLTF*AVSLDL
Trigger: AAGATCTAGAGACACAGCTCAAAATGTCAGATCTAG...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCAATGTTCAGCCCGCTaGCTTTCATTTAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMQCSAR*LSFNSF
Trigger: GAAGGAATTAAATGAAAGGCAGCGGGCTGAACATTG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCAATGTTCAGCCCGCTaGCTTTCATTTAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEQCSAR*LSFNSF
Trigger: GAAGGAATTAAATGAAAGGCAGCGGGCTGAACATTG...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTTGGCGCAGATGTTTTaGTCTGTTTCTTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLLAQMF*SVSSLQ
Trigger: TTGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCTCTCTTCTAGTGATTTaGAAGTTGCCCGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVSLLVI*KLPVFL
Trigger: TAGAAACACGGGCAACTTGCAAATCACTAGAAGAGA...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTCTCTTCTAGTGATTTaGAAGTTGCCCGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCASLLVI*KLPVFL
Trigger: TAGAAACACGGGCAACTTGCAAATCACTAGAAGAGA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCAGAGCTTTTCTCTTTCTaGAGTGGCAGGCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPELFSF*SGRQSK
Trigger: CTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTC...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCGAGCTTTTCTCTTTCTaGAGTGGCAGGCAATCGAAG +
Preference number: 4 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFELFSF*SGRQSK
Trigger: CTTCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTC...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGCCAGACGAATAAAATaGTTGTTGGTAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYARRIK*LLVGTG
Trigger: TCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAAGTGCCCGACTAAGTaGTTTCTGTTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYKCPTK*FLLFLL
Trigger: AAGGAGAAACAACAGAAAGCACTTAGTCGGGCACTT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCACGTTCTTCAGCAGCTaGTGTCATTTCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFTFFSS*CHFCPE
Trigger: CTCCGGGCAGAAATGACAGCAGCTGCTGAAGAACGT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCCCTGATCAACAGTCATaGCAGTTGTTTTTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGPDQQS*QLFLVS
Trigger: GGAAACTAAAAACAACTGGCATGACTGTTGATCAGG...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCTGGATTCATAGTGCATaGTCAACTGATGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCWIHSA*STDAQD
Trigger: ATCTTGGGCATCAGTTGAGCATGCACTATGAATCCA...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGGATTCATAGTGCATaGTCAACTGATGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMWIHSA*STDAQD
Trigger: ATCTTGGGCATCAGTTGAGCATGCACTATGAATCCA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGGATTCATAGTGCATaGTCAACTGATGCCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYWIHSA*STDAQD
Trigger: ATCTTGGGCATCAGTTGAGCATGCACTATGAATCCA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTGCTTTCTGCAAACTaGAATCTCTTACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLLSAN*NLLPVS
Trigger: AGAGACTGGTAAGAGATTGCAGTTTGCAGAAAGCAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCTGCTTTCTGCAAACTaGAATCTCTTACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNELLSAN*NLLPVS
Trigger: AGAGACTGGTAAGAGATTGCAGTTTGCAGAAAGCAG...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGCTTTCTGCAAACTaGAATCTCTTACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLLSAN*NLLPVS
Trigger: AGAGACTGGTAAGAGATTGCAGTTTGCAGAAAGCAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSTGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547926.7
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFRETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCCTTCAAGGCTAATTaGCTCTTTAGCCGTTCTACT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSFKAN*LFSRST
Trigger: AGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTCCTTCAAGGCTAATTaGCTCTTTAGCCGTTCTACT +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRSFKAN*LFSRST
Trigger: AGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCGAGGAAGAGCTTGGTaGGCCCTCATATACAATATA +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSRGRAW*ALIYNI
Trigger: TATATTGTATATGAGGGCCCACCAAGCTCTTCCTCG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTTTCAGCTCCACTTTaGTCCTTGTTAGCTTCTATC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLSAPL*SLLASI
Trigger: GATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTTTCAGCTCCACTTTaGTCCTTGTTAGCTTCTATC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLSAPL*SLLASI
Trigger: GATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
3UTR CAA 72 bp GTCTGTTCCATCTCAGCCAGACGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGAGACTGTTTCATTAAA +
Preference number: 4 (lower is better)
Translates to: VCSISARRIKCL*VGTGVGDCFIK
Trigger: TTTAATGAAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAGATGGAACAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCGCCAGCTCCACTTCTTaGGCTTTCATCTTCATTAGT +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLASSTS*AFIFIS
Trigger: ACTAATGAAGATGAAAGCTCAAGAAGTGGAGCTGGC...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR TCA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTGCATCTTGTTGGACTTaGTCCTCAAGTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCIASCWT*SSSFLF
Trigger: AAAGAGAAAACTTGAGGATCAAGTCCAACAAGATGC...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGCATCTTGTTGGACTTaGTCCTCAAGTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMASCWT*SSSFLF
Trigger: AAAGAGAAAACTTGAGGATCAAGTCCAACAAGATGC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCGCATCTTGTTGGACTTaGTCCTCAAGTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFASCWT*SSSFLF
Trigger: AAAGAGAAAACTTGAGGATCAAGTCCAACAAGATGC...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCATCCGAATCCATCTaGAGAGCATTGAGCAAATTA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSSESI*RALSKL
Trigger: TAATTTGCTCAATGCTCTTCAGATGGATTCGGATGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCATCCGAATCCATCTaGAGAGCATTGAGCAAATTA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSSESI*RALSKL
Trigger: TAATTTGCTCAATGCTCTTCAGATGGATTCGGATGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAGCTTGTTCAATAGTGTaGAGTTTTTCCTTGGTAATC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAACSIV*SFSLVI
Trigger: GATTACCAAGGAAAAACTTCACACTATTGAACAAGC...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRQFRCN*LQLTKS
Trigger: GCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYQFRCN*LQLTKS
Trigger: GCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMQFRCN*LQLTKS
Trigger: GCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTTTCATATGCCAGTTaGTTACCTTTTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFSYAS*LPFGLL
Trigger: AAGGAGCCCAAAAGGTAATCAACTGGCATATGAAAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTTTCATATGCCAGTTaGTTACCTTTTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFSYAS*LPFGLL
Trigger: AAGGAGCCCAAAAGGTAATCAACTGGCATATGAAAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTTCTTCAAGACTGCTaGTTGTACGTTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLLQDC*LYVHIQ
Trigger: CTGAATATGAACGTACAATCAGCAGTCTTGAAGAAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCTTCTTCAAGACTGCTaGTTGTACGTTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRLLQDC*LYVHIQ
Trigger: CTGAATATGAACGTACAATCAGCAGTCTTGAAGAAG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGAAGCCTCAGTTCATTaGTTACTTTGTCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYEASVH*LLCLLT
Trigger: TGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGGAAGCCTCAGTTCATTaGTTACTTTGTCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEEASVH*LLCLLT
Trigger: TGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTC...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGAAGCCTCAGTTCATTaGTTACTTTGTCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMEASVH*LLCLLT
Trigger: TGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCGAAGCCTCAGTTCATTaGTTACTTTGTCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTREASVH*LLCLLT
Trigger: TGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTC...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGTTGTTGGAGCTCTTaGATTTGCTTCTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSCWSS*ICFFLS
Trigger: GCTCAAAAAGAAGCAAATTCAAGAGCTCCAACAACT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGAGTTGTTGGAGCTCTTaGATTTGCTTCTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNESCWSS*ICFFLS
Trigger: GCTCAAAAAGAAGCAAATTCAAGAGCTCCAACAACT...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCACGATCAACGATTTGTTaGACATTGAGATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPRSTIC*TLRWAS
Trigger: AGAGGCCCATCTCAATGTTCAACAAATCGTTGATCG...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCCGTATTCCCAAAACCTaGTCAACAGTCATGCCAGTT +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLRIPKT*STVMPV
Trigger: AACTGGCATGACTGTTGATCAGGTTTTGGGAATACG...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTCCAATTCTTTTTCTaGCTCCAAAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFQFFF*LQSSYS
Trigger: GGAATACGAGCTTTGGAGTCAGAAAAAGAATTGGAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCAGCTAATCTAAGAACTTaGAGCTCCCGTTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPANLRT*SSRLRP
Trigger: AGGCCTTAAACGGGAGCTTCAAGTTCTTAGATTAGC...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTAGATCTGACATTTTaGGCTGTGTCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLDLTF*AVSLDL
Trigger: AAGATCTAGAGACACAGCTCAAAATGTCAGATCTAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTAGATCTGACATTTTaGGCTGTGTCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLDLTF*AVSLDL
Trigger: AAGATCTAGAGACACAGCTCAAAATGTCAGATCTAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAACAAGCAGCTATTACTaGGGAGATGCTAGACCAAAT +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLTSSYY*GDARPN
Trigger: ATTTGGTCTAGCATCTCCTCAGTAATAGCTGCTTGT...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR GCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR GCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAACATCAGGATCTTTCTaGATTTCCTTAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCATSGSF*ISLIAC
Trigger: GCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGT...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGACTTGGGCTTTCAAATaGAGACTCGCATCAAAGATT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMTWAFK*RLASKI
Trigger: AATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCAACTTTTTGGAGAGCTaGAATCTTGAAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVNFLES*NLENGH
Trigger: ATGGCCATTTTCAAGATTGCAGCTCTCCAAAAAGTT...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATCAATGTTCAGCCCGCTaGCTTTCATTTAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDQCSAR*LSFNSF
Trigger: GAAGGAATTAAATGAAAGGCAGCGGGCTGAACATTG...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTGTTCCACCTTCTGTaGATCCAAATTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLFHLL*IQIDFG
Trigger: ACCAAAATCAATTTGGATGCACAGAAGGTGGAACAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGTTCCACCTTCTGTaGATCCAAATTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLFHLL*IQIDFG
Trigger: ACCAAAATCAATTTGGATGCACAGAAGGTGGAACAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCTGTTCCACCTTCTGTaGATCCAAATTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNELFHLL*IQIDFG
Trigger: ACCAAAATCAATTTGGATGCACAGAAGGTGGAACAG...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCATCACTTACTGCCTTaGTCACACTATCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYHHLLP*SHYQLI
Trigger: AATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCCATCACTTACTGCCTTaGTCACACTATCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCHHLLP*SHYQLI
Trigger: AATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATG...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCATCACTTACTGCCTTaGTCACACTATCAGCTAATT +
Preference number: 4 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEHHLLP*SHYQLI
Trigger: AATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATG...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCTCTTCTAGTGATTTaGAAGTTGCCCGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSLLVI*KLPVFL
Trigger: TAGAAACACGGGCAACTTGCAAATCACTAGAAGAGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCTCTTCTAGTGATTTaGAAGTTGCCCGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSLLVI*KLPVFL
Trigger: TAGAAACACGGGCAACTTGCAAATCACTAGAAGAGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATACGTTCTTCAGCAGCTaGTGTCATTTCTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYTFFSS*CHFCPE
Trigger: CTCCGGGCAGAAATGACAGCAGCTGCTGAAGAACGT...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCCTGATCAACAGTCATaGCAGTTGTTTTTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMPDQQS*QLFLVS
Trigger: GGAAACTAAAAACAACTGGCATGACTGTTGATCAGG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCCTGATCAACAGTCATaGCAGTTGTTTTTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYPDQQS*QLFLVS
Trigger: GGAAACTAAAAACAACTGGCATGACTGTTGATCAGG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCTGCTTTCTGCAAACTaGAATCTCTTACCAGTCTCT +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSLLSAN*NLLPVS
Trigger: AGAGACTGGTAAGAGATTGCAGTTTGCAGAAAGCAG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCCCGTTTAAGGCCTTaGTCTGTCTCAGCACCTTCA +
Preference number: 4 (lower is better)
Translates to: VSLLVICKLPVFLELFECSRLRP*SVSAPS
Trigger: TGAAGGTGCTGAGACAGAGCAAGGCCTTAAACGGGA...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTTCCTCCTTCAAATGCTaGTTTTCTAGATCTGACATT +
Preference number: 4 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFSSFKC*FSRSDI
Trigger: AATGTCAGATCTAGAAAAGCAGCATTTGAAGGAGGA...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp CTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGCCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LDGPEVIFRNFQILGCDLPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...CAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CCA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTACCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPTGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCAACGGGGCAGGTCATCTaGGTCAACTTTCATTATTTC +
Preference number: 4 (lower is better)
Translates to: LNICSTFCASKLILVSSATGQVI*VNFHYF
Trigger: GAAATAATGAAAGTTGACCCAGATGACCTGCCCCGT...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAGGTTCAGGTCCTCAGTaGTTAATCCTGAAGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLGSGPQ*LILKLH
Trigger: GTGCAACTTCAGGATTAACCACTGAGGACCTGAACC...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000547926.7
ENST00000676448.1
CDS-3UTR CCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLRETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAAGAGAGACATTATGTTaGTGCAACTTGGCAATGAGC +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVRETLC*CNLAMS
Trigger: GCTCATTGCCAAGTTGCACCAACATAATGTCTCTCT...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCCTTTTGGGCTCCTTTaGTATCCTTTAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMPFGLL*YPLKCL
Trigger: TAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCCTTTTGGGCTCCTTTaGTATCCTTTAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYPFGLL*YPLKCL
Trigger: TAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCAAAAATGTCTAGTTaGCGTTCCAGGTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSKMSS*RSRSTS
Trigger: AGAAGTTGACCTGGAACGCCAACTAGACATTTTTGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCAAAAATGTCTAGTTaGCGTTCCAGGTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSKMSS*RSRSTS
Trigger: AGAAGTTGACCTGGAACGCCAACTAGACATTTTTGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATCTCTTTATCGGCTTTaGCAAAAAGATCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCASLYRL*QKDPSK
Trigger: CTTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGA...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCACGAGGAAGAGCTTGGTaGGCCCTCATATACAATATA +
Preference number: 4 (lower is better)
Translates to: LNICSTFCASKLILVSSARGRAW*ALIYNI
Trigger: TATATTGTATATGAGGGCCCACCAAGCTCTTCCTCG...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTCTCGAGGAAGAGCTTaGTGGGCCCTCATATACAAT +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFSRGRA*WALIYN
Trigger: ATTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATAGCACCTTCAAGCTGTaGACCTCTGCTTTCTGCAAA +
Preference number: 4 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDSTFKL*TSAFCK
Trigger: TTTGCAGAAAGCAGAGGTCCACAGCTTGAAGGTGCT...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTAATCAATCATTGTCTTTaGTTCAAGGCCTACAATAGA +
Preference number: 4 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLINHCL*FKAYNR
Trigger: TCTATTGTAGGCCTTGAACCAAAGACAATGATTGAT...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR CAA 72 bp TCTAGAATCCGTTGCCTATCAGCATCACTTACTGCCTaGCTCACACTATCAGCTAATTCATCTCTTAACATC +
Preference number: 4 (lower is better)
Translates to: SRIRCLSASLTA*LTLSANSSLNI
Trigger: GATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGCTGATAGGCAACGGATTCTAGA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
3UTR CAA 72 bp CATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTCAACTTGTCTTCTGGC +
Preference number: 4 (lower is better)
Translates to: HSEGLYFLVPRL*LCIQNFNLSSG
Trigger: GCCAGAAGACAAGTTGAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCTTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IQLNQSLSLVQGLDGPEVLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...GACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR TCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTATTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTATTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR TCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: IQLNQSLSLVQGLDGPEVVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...GACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR TCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR TCA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCCTGTTGAGAAAGGGTTaGAGCACCTTTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFLLRKG*STFVSL
Trigger: CAAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAG...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTACTTTCCGAGATTCCCTaGGCTCCTGTCTTAATTCTT +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLLSEIP*APVLIL
Trigger: AAGAATTAAGACAGGAGCTCAGGGAATCTCGGAAAG...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGCTTGTTCAATAGTGTaGAGTTTTTCCTTGGTAATC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYACSIV*SFSLVI
Trigger: GATTACCAAGGAAAAACTTCACACTATTGAACAAGC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCGGTGCAACTTGGCAATaGGCGACTTTTCATCAGACT +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFGATWQ*ATFHQT
Trigger: AGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACC...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTGTAGCCTCACTCAGTTaGAGAGAGACATTATGTTGG +
Preference number: 4 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFVASLS*RETLCW
Trigger: CCAACATAATGTCTCTCTTCAACTGAGTGAGGCTAC...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTGTCGTCGTAGAGACTaGATTGTTTGGCGCAGATGT +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFCRRRD*IVWRRC
Trigger: ACATCTGCGCCAAACAATTCAGTCTCTACGACGACA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCTTCTTCAAGACTGCTaGTTGTACGTTCATATTCAG +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSLLQDC*LYVHIQ
Trigger: CTGAATATGAACGTACAATCAGCAGTCTTGAAGAAG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATTTTCAATGTGTGGTaGGATTTTGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMIFNVW*DFGSIS
Trigger: AGAGATGGAACCAAAATCTCACCACACATTGAAAAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATATACTTTCTTTAGTTTaGCCAAGAGTGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYILSLV*PRVRKE
Trigger: CTCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTAT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAGATGGGCCTCTTTTTaGGAAGTTGCAGAAATAATA +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRWASF*EVAEII
Trigger: TATTATTTCTGCAACTTCTCAAAAAGAGGCCCATCT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR TCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAGATGGGCCTCTTTTTaGGAAGTTGCAGAAATAATA +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFRWASF*EVAEII
Trigger: TATTATTTCTGCAACTTCTCAAAAAGAGGCCCATCT...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCACGATTTGTTGAACATTaGGATGGGCCTCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLTLSANSSLNICSTFCARFVEH*DGPLFE
Trigger: CTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCG...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGCGATTTGTTGAACATTaGGATGGGCCTCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWRFVEH*DGPLFE
Trigger: CTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCG...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTATTCCAATTCTTTTTCTaGCTCCAAAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVFQFFF*LQSSYS
Trigger: GGAATACGAGCTTTGGAGTCAGAAAAAGAATTGGAA...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTACAACCCCATAAAATCTaGTTCCACTTCAATCAGGTT +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLQPHKI*FHFNQV
Trigger: AACCTGATTGAAGTGGAATCAGATTTTATGGGGTTG...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR GCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR GCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTATCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTATCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGACATCAGGATCTTTCTaGATTTCCTTAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMTSGSF*ISLIAC
Trigger: GCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCACATCAGGATCTTTCTaGATTTCCTTAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFTSGSF*ISLIAC
Trigger: GCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGT...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATACATCAGGATCTTTCTaGATTTCCTTAATTGCTTGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYTSGSF*ISLIAC
Trigger: GCAAGCAATTAAGGAAATGCAGAAAGATCCTGATGT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCACTTGGGCTTTCAAATaGAGACTCGCATCAAAGATT +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLTWAFK*RLASKI
Trigger: AATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGT...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAACTTTTTGGAGAGCTaGAATCTTGAAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMNFLES*NLENGH
Trigger: ATGGCCATTTTCAAGATTGCAGCTCTCCAAAAAGTT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAACTTTTTGGAGAGCTaGAATCTTGAAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYNFLES*NLENGH
Trigger: ATGGCCATTTTCAAGATTGCAGCTCTCCAAAAAGTT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTTTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTCTGTTCCACCTTCTGTaGATCCAAATTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETLFHLL*IQIDFG
Trigger: ACCAAAATCAATTTGGATGCACAGAAGGTGGAACAG...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAATTCTAGAATCCGTTaGCTATCAGCATCACTTACT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYNSRIR*LSASLT
Trigger: AGTAAGTGATGCTGATAGGCAACGGATTCTAGAATT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCAGCCAGACGAATAAAATaGTTGTTGGTAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LNICSTFCASKLILVSSAARRIK*LLVGTG
Trigger: TCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGC...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCCTGATCAACAGTCATaGCAGTTGTTTTTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSPDQQS*QLFLVS
Trigger: GGAAACTAAAAACAACTGGCATGACTGTTGATCAGG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCCTCCTTCAAATGCTaGTTTTCTAGATCTGACATT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSSFKC*FSRSDI
Trigger: AATGTCAGATCTAGAAAAGCAGCATTTGAAGGAGGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAACTGACTACCACACTTaGCTCTTTCAAAAGAATCTG +
Preference number: 4 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLTDYHT*LFQKNL
Trigger: CAGATTCTTTTGAAAGAGGCAAGTGTGGTAGTCAGT...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CCA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCACCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCCCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGACTCCTTTTGTGACTaGTCCAGAAGATACTTTAAA +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYDSFCD*SRRYFK
Trigger: TTTAAAGTATCTTCTGGACCAGTCACAAAAGGAGTC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCTCTTTATCGGCTTTaGCAAAAAGATCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSLYRL*QKDPSK
Trigger: CTTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCTCTTTATCGGCTTTaGCAAAAAGATCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSLYRL*QKDPSK
Trigger: CTTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTCTCTTTATCGGCTTTaGCAAAAAGATCCTTCAAAG +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRSLYRL*QKDPSK
Trigger: CTTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCACTTTCAGCTCCACTTTaGTCCTTGTTAGCTTCTATC +
Preference number: 4 (lower is better)
Translates to: LNICSTFCASKLILVSSALSAPL*SLLASI
Trigger: GATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAG...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAGATCAGCATCAGGTATaGTGCTTTCAGCTCCACTTT +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLDQHQV*CFQLHF
Trigger: AAAGTGGAGCTGAAAGCACCATACCTGATGCTGATC...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR TCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCGCATCTTGTTGGACTTaGTCCTCAAGTTTTCTCTTT +
Preference number: 4 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFASCWT*SSSFLF
Trigger: AAAGAGAAAACTTGAGGATCAAGTCCAACAAGATGC...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLQFRCN*LQLTKS
Trigger: GCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTG...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATTTTCATATGCCAGTTaGTTACCTTTTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLTLSANSSLNICSTFCAFSYAS*LPFGLL
Trigger: AAGGAGCCCAAAAGGTAATCAACTGGCATATGAAAA...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCATTTTCAATGTGTGGTaGGATTTTGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLIFNVW*DFGSIS
Trigger: AGAGATGGAACCAAAATCTCACCACACATTGAAAAT...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTATACTTTCTTTAGTTTaGCCAAGAGTGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSILSLV*PRVRKE
Trigger: CTCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTAT...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTAGTTGTTGGAGCTCTTaGATTTGCTTCTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPSCWSS*ICFFLS
Trigger: GCTCAAAAAGAAGCAAATTCAAGAGCTCCAACAACT...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCCGATCAACGATTTGTTaGACATTGAGATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFRSTIC*TLRWAS
Trigger: AGAGGCCCATCTCAATGTTCAACAAATCGTTGATCG...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTTCGAAGAGCCAATTaGTCATTAACTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFRRAN*SLTFFS
Trigger: AGAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR GCA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAAGCTGTTTTCATTTTCTaGCTCCTCATTTCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: MILALDGAIPSGKSIPLKAVFIF*LLISKS
Trigger: GCTCTTCGAAATGAGGAGGCAGAAAATGAAAACAGC...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGATCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR GCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCTCAGCTCTGTACTGCTaGTGTTTTAAGTGTTTGCTA +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLSALYC*CFKCLL
Trigger: TAGCAAACACTTAAAACAGCAGCAGTACAGAGCTGA...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCAACTTGGGCTTTCAAATaGAGACTCGCATCAAAGATT +
Preference number: 4 (lower is better)
Translates to: LLTLSANSSLNICSTFCATWAFK*RLASKI
Trigger: AATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGT...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATAACTTTTTGGAGAGCTaGAATCTTGAAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDNFLES*NLENGH
Trigger: ATGGCCATTTTCAAGATTGCAGCTCTCCAAAAAGTT...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAAACTTTTTGGAGAGCTaGAATCTTGAAAATGGCCAT +
Preference number: 4 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVNFLES*NLENGH
Trigger: ATGGCCATTTTCAAGATTGCAGCTCTCCAAAAAGTT...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTTGGCGCAGATGTTTTaGTCTGTTTCTTCCCTCCAA +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFLAQMF*SVSSLQ
Trigger: TTGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTGGTATCCTTTAAAGTaGTTATTAACTCTTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLWYPLK*LLTLPG
Trigger: GCCTGGAAGAGTTAATAAGCACTTTAAAGGATACCA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTGCCAGACGAATAAAATaGTTGTTGGTAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFARRIK*LLVGTG
Trigger: TCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGC...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAGCCAGACGAATAAAATaGTTGTTGGTAGGAACTGGA +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLARRIK*LLVGTG
Trigger: TCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGC...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTATCTGTCAGGGGTTTaGCCTGTAATCCACTGGTTA +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFYLSGV*PVIHWL
Trigger: TAACCAGTGGATTACAGGGCAAACCCCTGACAGATA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCATCAATCATTGTCTTTaGTTCAAGGCCCACACGCTC +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFINHCL*FKAHTL
Trigger: GAGCGTGTGGGCCTTGAACCAAAGACAATGATTGAT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: FFISSGKLINLGFQMQTRFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCIFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCATCAAAAATGTCTAGTTaGCGTTCCAGGTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPSKMSS*RSRSTS
Trigger: AGAAGTTGACCTGGAACGCCAACTAGACATTTTTGA...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTCAAAAATGTCTAGTTaGCGTTCCAGGTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: ELMILALDGAIPSGKSIPSKMSS*RSRSTS
Trigger: AGAAGTTGACCTGGAACGCCAACTAGACATTTTTGA...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTGATCTCAAGTTGATTTaGAAGGGGCAAACTAGGGTC +
Preference number: 4 (lower is better)
Translates to: VSLLVICKLPVFLELFECDLKLI*KGQTRV
Trigger: GACCCTAGTTTGCCCCTTCCAAATCAACTTGAGATC...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATGACTCCTTTTGTGACTaGTCCAGAAGATACTTTAAA +
Preference number: 4 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDDSFCD*SRRYFK
Trigger: TTTAAAGTATCTTCTGGACCAGTCACAAAAGGAGTC...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTTTTCTGTGCCTTTGGTCTTGGATTCATAGTGCATGCTCAACTGATGCCCAAGGAATTCCTTCTATTTTaGCTTGCCACTTTTTACCTT +
Preference number: 4 (lower is better)
Translates to: FFCAFGLGFIVHAQLMPKEFLLF*LATFYL
Trigger: AAGGTAAAAAGTGGCAAGCCAAAATAGAAGGAATTC...CTTGGGCATCAGTTGAGCATGCACTATGAATCCAAGACCAAAGGCACAGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGAATTCCTTCTATTTTaGCTTGCCACTTTTTACCTT +
Preference number: 4 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYEFLLF*LATFYL
Trigger: AAGGTAAAAAGTGGCAAGCCAAAATAGAAGGAATTC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCGAATTCCTTCTATTTTaGCTTGCCACTTTTTACCTT +
Preference number: 4 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCEFLLF*LATFYL
Trigger: AAGGTAAAAAGTGGCAAGCCAAAATAGAAGGAATTC...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGAATTCCTTCTATTTTaGCTTGCCACTTTTTACCTT +
Preference number: 4 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMEFLLF*LATFYL
Trigger: AAGGTAAAAAGTGGCAAGCCAAAATAGAAGGAATTC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CCA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCGAATTCCTTCTATTTTaGCTTGCCACTTTTTACCTT +
Preference number: 4 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFEFLLF*LATFYL
Trigger: AAGGTAAAAAGTGGCAAGCCAAAATAGAAGGAATTC...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TGTCTAACGTTGACTGAATTTTCATATGAGTCTGTTGAGAAAGGGTTGAAGCACATCAGAAGTCTAATTTaGGGTCCTAGCACAACTACG +
Preference number: 4 (lower is better)
Translates to: CLTLTEFSYESVEKGLKHIRSLI*GPSTTT
Trigger: CGTAGTTGTGCTAGGACCCCAAATTAGACTTCTGAT...GTGCTTCAACCCTTTCTCAACAGACTCATATGAAAATTCAGTCAACGTTAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR CAA 72 bp CTTTCTGCAGTGGCAGGCAATCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGACAGTATATTTTGTTCT +
Preference number: 4 (lower is better)
Translates to: LSAVAGNRSLSS*ITLSLDSIFCS
Trigger: AGAACAAAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGCCACTGCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAATTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: MILALDGAIPSGKSIPLKLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTTTCTTCCGGTAAGCTaGTCAACTTGGGCTTTCAAA +
Preference number: 4 (lower is better)
Translates to: VSLLVICKLPVFLELFECFLPVS*STWAFK
Trigger: TTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAA...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTTCATCCGAATCCATCTaGAGAGCATTGAGCAAATTA +
Preference number: 4 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFSSESI*RALSKL
Trigger: TAATTTGCTCAATGCTCTTCAGATGGATTCGGATGA...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTCATCCGAATCCATCTaGAGAGCATTGAGCAAATTA +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFSSESI*RALSKL
Trigger: TAATTTGCTCAATGCTCTTCAGATGGATTCGGATGA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCAGCTTGTTCAATAGTGTaGAGTTTTTCCTTGGTAATC +
Preference number: 4 (lower is better)
Translates to: LNICSTFCASKLILVSSAACSIV*SFSLVI
Trigger: GATTACCAAGGAAAAACTTCACACTATTGAACAAGC...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCGCTTGTTCAATAGTGTaGAGTTTTTCCTTGGTAATC +
Preference number: 4 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFACSIV*SFSLVI
Trigger: GATTACCAAGGAAAAACTTCACACTATTGAACAAGC...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATAGAGCGATCTCAAGTTaGTTTGGAAGGGGCAAACTA +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNRAISS*FGRGKL
Trigger: TAGTTTGCCCCTTCCAAATCAACTTGAGATCGCTCT...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTTCCAATTCTTTTTCTaGCTCCAAAGCTCGTATTCC +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFFQFFF*LQSSYS
Trigger: GGAATACGAGCTTTGGAGTCAGAAAAAGAATTGGAA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATGCTAATCTAAGAACTTaGAGCTCCCGTTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYANLRT*SSRLRP
Trigger: AGGCCTTAAACGGGAGCTTCAAGTTCTTAGATTAGC...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR TCA 90 bp ATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTCTAGATCTGACATTTTaGGCTGTGTCTCTAGATCTT +
Preference number: 4 (lower is better)
Translates to: ILRDSTSLSLDCCCAFKILDLTF*AVSLDL
Trigger: AAGATCTAGAGACACAGCTCAAAATGTCAGATCTAG...AATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR TCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTAAGAAAATAATCAACTaGCTACCACACTTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVKKIIN*LPHLPL
Trigger: AAGAGGCAAGTGTGGTAGTCAGTTGATTATTTTCTT...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR GCA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTTTCGAAGAGCCAATTaGTCATTAACTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLFRRAN*SLTFFS
Trigger: AGAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAACTTGGGCTTTCAAATaGAGACTCGCATCAAAGATT +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLTWAFK*RLASKI
Trigger: AATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGT...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTATTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTCTGTTCCACCTTCTGTaGATCCAAATTGATTTTGGT +
Preference number: 4 (lower is better)
Translates to: ILRDSTSLSLDCCCAFKILFHLL*IQIDFG
Trigger: ACCAAAATCAATTTGGATGCACAGAAGGTGGAACAG...AATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTAAGTGCCCGACTAAGTaGTTTCTGTTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSKCPTK*FLLFLL
Trigger: AAGGAGAAACAACAGAAAGCACTTAGTCGGGCACTT...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTCCTGATCAACAGTCATaGCAGTTGTTTTTAGTTTCC +
Preference number: 4 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFPDQQS*QLFLVS
Trigger: GGAAACTAAAAACAACTGGCATGACTGTTGATCAGG...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTAGCAGCAACTTAGTCTaGACTATCATAACACTCAAA +
Preference number: 4 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVSSNLV*TIITLK
Trigger: TTTGAGTGTTATGATAGTGCAGACTAAGTTGCTGCT...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CCA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTACCTTTTGGGCTCCTTTaGTATCCTTTAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLPFGLL*YPLKCL
Trigger: TAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGG...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTCCTTTTGGGCTCCTTTaGTATCCTTTAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFPFGLL*YPLKCL
Trigger: TAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGG...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGGACTCCTTTTGTGACTaGTCCAGAAGATACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWDSFCD*SRRYFK
Trigger: TTTAAAGTATCTTCTGGACCAGTCACAAAAGGAGTC...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCAGACTCCTTTTGTGACTaGTCCAGAAGATACTTTAAA +
Preference number: 4 (lower is better)
Translates to: LNICSTFCASKLILVSSADSFCD*SRRYFK
Trigger: TTTAAAGTATCTTCTGGACCAGTCACAAAAGGAGTC...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATTTATCAGCATCAAGCTaGGCATTCTTAAGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNLSASS*AFLSFS
Trigger: GGAGAAACTTAAGAATGCTCAGCTTGATGCTGATAA...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTGTGAGCATCTTAATTTaGCTGTCTCGTTCCTGTATA +
Preference number: 4 (lower is better)
Translates to: QLITFWAPLVSFKVLINSVSILI*LSRSCI
Trigger: TATACAGGAACGAGACAGTCAAATTAAGATGCTCAC...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATCTGTTGAGAAAGGGTTaGAGCACCTTTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNLLRKG*STFVSL
Trigger: CAAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAG...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAAGCTTGTTCAATAGTGTaGAGTTTTTCCTTGGTAATC +
Preference number: 4 (lower is better)
Translates to: MILALDGAIPSGKSIPLKACSIV*SFSLVI
Trigger: GATTACCAAGGAAAAACTTCACACTATTGAACAAGC...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTCAGTTTAGATGTAATTaGCTCCAACTTACCAAGAGC +
Preference number: 4 (lower is better)
Translates to: VSLLVICKLPVFLELFECQFRCN*LQLTKS
Trigger: GCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTG...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTGAAGCCTCAGTTCATTaGTTACTTTGTCTCTTGACA +
Preference number: 4 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSEASVH*LLCLLT
Trigger: TGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTC...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAATACTTTCTTTAGTTTaGCCAAGAGTGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLILSLV*PRVRKE
Trigger: CTCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTAT...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTATACTTTCTTTAGTTTaGCCAAGAGTGAGGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFILSLV*PRVRKE
Trigger: CTCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTAT...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATCGATTTGTTGAACATTaGGATGGGCCTCTTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNRFVEH*DGPLFE
Trigger: CTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCG...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTTTTCGAAGAGCCAATTaGTCATTAACTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVFRRAN*SLTFFS
Trigger: AGAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAA...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR GCA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTACTTGGGCTTTCAAATaGAGACTCGCATCAAAGATT +
Preference number: 4 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSTWAFK*RLASKI
Trigger: AATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGT...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATCAATGTTCAGCCCGCTaGCTTTCATTTAATTCCTTC +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYQCSAR*LSFNSF
Trigger: GAAGGAATTAAATGAAAGGCAGCGGGCTGAACATTG...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp ATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTAATTCTAGAATCCGTTaGCTATCAGCATCACTTACT +
Preference number: 4 (lower is better)
Translates to: ILRDSTSLSLDCCCAFKINSRIR*LSASLT
Trigger: AGTAAGTGATGCTGATAGGCAACGGATTCTAGAATT...AATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATAAGTGCCCGACTAAGTaGTTTCTGTTGTTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYKCPTK*FLLFLL
Trigger: AAGGAGAAACAACAGAAAGCACTTAGTCGGGCACTT...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATTCAAAAATGTCTAGTTaGCGTTCCAGGTCAACTTCT +
Preference number: 4 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNSKMSS*RSRSTS
Trigger: AGAAGTTGACCTGGAACGCCAACTAGACATTTTTGA...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTTTTTGCAAACAAACATaGGTAATACAGACCCTACTT +
Preference number: 4 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVFCKQT*VIQTLL
Trigger: AAGTAGGGTCTGTATTACCCATGTTTGTTTGCAAAA...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000676351.1
3UTR CAA 72 bp TTTTGCAAGATGTCCCTGTACTTAGCAGTCAGTTCATaGTACTGTTTATTAGCCAGTTCTAGTTCAGACAAA +
Preference number: 4 (lower is better)
Translates to: FCKMSLYLAVSS*YCLLASSSSDK
Trigger: TTTGTCTGAACTAGAACTGGCTAATAAACAGTACAATGAACTGACTGCTAAGTACAGGGACATCTTGCAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATTTTTCATATGCCAGTTaGTTACCTTTTGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYFSYAS*LPFGLL
Trigger: AAGGAGCCCAAAAGGTAATCAACTGGCATATGAAAA...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATATTTTCAATGTGTGGTaGGATTTTGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNIFNVW*DFGSIS
Trigger: AGAGATGGAACCAAAATCTCACCACACATTGAAAAT...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATAGTTGTTGGAGCTCTTaGATTTGCTTCTTTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNSCWSS*ICFFLS
Trigger: GCTCAAAAAGAAGCAAATTCAAGAGCTCCAACAACT...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCAGATGGGCCTCTTTTTaGGAAGTTGCAGAAATAATA +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFRWASF*EVAEII
Trigger: TATTATTTCTGCAACTTCTCAAAAAGAGGCCCATCT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTATTTCGAAGAGCCAATTaGTCATTAACTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LMILALDGAIPSGKSIPLFRRAN*SLTFFS
Trigger: AGAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAA...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTTTCGAAGAGCCAATTaGTCATTAACTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFFRRAN*SLTFFS
Trigger: AGAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTTACGTTCCTCCATTTaGTTTAACGAAGTCCGTAAG +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNLRSSI*FNEVRK
Trigger: CTTACGGACTTCGTTAAAGCAAATGGAGGAACGTAA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTAATTCTAGAATCCGTTaGCTATCAGCATCACTTACT +
Preference number: 4 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSNSRIR*LSASLT
Trigger: AGTAAGTGATGCTGATAGGCAACGGATTCTAGAATT...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTCTCTTCTAGTGATTTaGAAGTTGCCCGTGTTTCTA +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNSLLVI*KLPVFL
Trigger: TAGAAACACGGGCAACTTGCAAATCACTAGAAGAGA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAACCAGTTTATATTAGGTaGCATCTTGAATTCTTTCAC +
Preference number: 4 (lower is better)
Translates to: MILALDGAIPSGKSIPLKPVYIR*HLEFFH
Trigger: GTGAAAGAATTCAAGATGCCACCTAATATAAACTGG...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATCCTTTTGGGCTCCTTTaGTATCCTTTAAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNPFGLL*YPLKCL
Trigger: TAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGG...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR TCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATATTTTCAATGTGTGGTaGGATTTTGGTTCCATCTCT +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYIFNVW*DFGSIS
Trigger: AGAGATGGAACCAAAATCTCACCACACATTGAAAAT...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTTTCGAAGAGCCAATTaGTCATTAACTTTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFFRRAN*SLTFFS
Trigger: AGAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR GCA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATTCCTCCTTCAAATGCTaGTTTTCTAGATCTGACATT +
Preference number: 4 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYSSFKC*FSRSDI
Trigger: AATGTCAGATCTAGAAAAGCAGCATTTGAAGGAGGA...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CCA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTTTCAACTTGTCTTCTaGCAATATCAGAAATCTCTC +
Preference number: 4 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNFQLVF*QYQKSL
Trigger: GAGAGATTTCTGATATTGCCAGAAGACAAGTTGAAA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS TCA 90 bp GCCTCTCACTACCGCAACCACCAAGCTGGACCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTTCCACGCGGACTCTGGGTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: ASHYRNHQAGPGRGP*QIPIAVPRGLWVQP
Trigger: TGGCTGGACCCAGAGTCCGCGTGGAACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGGTAGTGAGAGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000309041.12
ENST00000397838.8
ENST00000547926.7
ENST00000552770.3
ENST00000552810.6
ENST00000671822.2
ENST00000672414.2
ENST00000673058.2
ENST00000674971.1
ENST00000675230.1
ENST00000675408.1
ENST00000675476.1
ENST00000675559.1
ENST00000675628.1
ENST00000675794.1
ENST00000675833.1
ENST00000676074.1
ENST00000676331.1
ENST00000676351.1
ENST00000676418.1
ENST00000676448.1
CDS CCA 90 bp AGCCTGGCAACCAGCGGAGGCCTCTCACTACCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTGACAGATCCCTATCGCGGTTCCACG +
Preference number: 5 (lower is better)
Translates to: SLATSGGLSLPQPPS*TRPRALTDPYRGST
Trigger: CGTGGAACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGGTAGTGAGAGGCCTCCGCTGGTTGCCAGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000309041.12
ENST00000397838.8
ENST00000547926.7
ENST00000552770.3
ENST00000552810.6
ENST00000671822.2
ENST00000672414.2
ENST00000673058.2
ENST00000674971.1
ENST00000675230.1
ENST00000675408.1
ENST00000675476.1
ENST00000675559.1
ENST00000675628.1
ENST00000675794.1
ENST00000675833.1
ENST00000676074.1
ENST00000676331.1
ENST00000676351.1
ENST00000676418.1
ENST00000676448.1
CDS CCA 90 bp GGCGGAAACTGGAACCGAAGCAAGGCAGTATTAGGGACCCGAGGCTaGAAGGGCGGGGTAGCTATGCTGTGGCACACGGGCCCTCAGGCT +
Preference number: 5 (lower is better)
Translates to: GGNWNRSKAVLGTRG*KGGVAMLWHTGPQA
Trigger: AGCCTGAGGGCCCGTGTGCCACAGCATAGCTACCCCGCCCTTCCAGCCTCGGGTCCCTAATACTGCCTTGCTTCGGTTCCAGTTTCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675361.1
CDS TCA 90 bp ACTCGCTCTGTTATACAGGCACATAGGCTGGAGATCAGTGGCACATaGTCACAGCTCACTGCAGCCCCCAACTTCCTGGGCTCAAGCGAT +
Preference number: 5 (lower is better)
Translates to: TRSVIQAHRLEISGT*SQLTAAPNFLGSSD
Trigger: ATCGCTTGAGCCCAGGAAGTTGGGGGCTGCAGTGAGCTGTGATCATGTGCCACTGATCTCCAGCCTATGTGCCTGTATAACAGAGCGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676363.1
CDS-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS CCA 90 bp TTTCTTTTAAGAGAGAGACTCGCTCTGTTATACAGGCACATAGGCTaGAGATCAGTGGCACATGATCACAGCTCACTGCAGCCCCCAACT +
Preference number: 5 (lower is better)
Translates to: FLLRERLALLYRHIG*RSVAHDHSSLQPPT
Trigger: AGTTGGGGGCTGCAGTGAGCTGTGATCATGTGCCACTGATCTCCAGCCTATGTGCCTGTATAACAGAGCGAGTCTCTCTCTTAAAAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676363.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTCCCGTTTAAGGCCTaGCTCTGTCTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLPFKA*LCLSTF
Trigger: GAAGGTGCTGAGACAGAGCAAGGCCTTAAACGGGAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CAA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGATTTGGCGCAGATGTTTaGCTCTGTTTCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRFGADV*LCFFPP
Trigger: TGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAA...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCATCTCGAGGAAGAGCTaGGTGGGCCCTCATATACAA +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVISRKS*VGPHIQ
Trigger: TTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGAT...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCTCCCGTTTAAGGCCTaGCTCTGTCTCAGCACCTTC +
Preference number: 5 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSLPFKA*LCLSTF
Trigger: GAAGGTGCTGAGACAGAGCAAGGCCTTAAACGGGAG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CAA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAAATCAATCATTGTCTTaGGTTCAAGGCCCACACGCT +
Preference number: 5 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRNQSLS*VQGPHA
Trigger: AGCGTGTGGGCCTTGAACCAAAGACAATGATTGATT...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTATCTGTCAGGGGTTaGCCCTGTAATCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: SSCILRDSTSLSLDCCCALSVRG*PCNPLV
Trigger: AACCAGTGGATTACAGGGCAAACCCCTGACAGATAA...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATCTCGAGGAAGAGCTaGGTGGGCCCTCATATACAA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMISRKS*VGPHIQ
Trigger: TTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: LMILALDGAIPSGKSIPLICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CAAGGCCTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTTCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: QGLDGPEVIFRNFQILGCSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...ACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAGGCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCAATCAATCATTGTCTTaGGTTCAAGGCCCACACGCT +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCANQSLS*VQGPHA
Trigger: AGCGTGTGGGCCTTGAACCAAAGACAATGATTGATT...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAGCATCACTTACTGCCTaGCTCACACTATCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAASLTA*LTLSAN
Trigger: ATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGC...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTTGGCGCAGATGTTTaGCTCTGTTTCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFGADV*LCFFPP
Trigger: TGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTTGGCGCAGATGTTTaGCTCTGTTTCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFGADV*LCFFPP
Trigger: TGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCAGGTCAACTTCTCTTaGATCCCAGGCCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYQVNFS*IPGHLS
Trigger: AGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCAGGTCAACTTCTCTTaGATCCCAGGCCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMQVNFS*IPGHLS
Trigger: AGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCACGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: SSCILRDSTSLSLDCCCARIKCL*VGTGVG
Trigger: TCCCACTCCAGTTCCTACCAACAAGCATTTTATTCG...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTCAGCCAGACGAATAAAATGCTTGTTGGTAGGAACTGGAGTGGGAGACTGTTTTCGATCAACGATTTGTaGAACATTGAGATGGGCCTC +
Preference number: 5 (lower is better)
Translates to: LSQTNKMLVGRNWSGRLFSINDL*NIEMGL
Trigger: GAGGCCCATCTCAATGTTCAACAAATCGTTGATCGA...AAACAGTCTCCCACTCCAGTTCCTACCAACAAGCATTTTATTCGTCTGGCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTATCTGTCAGGGGTTaGCCCTGTAATCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLSVRG*PCNPLV
Trigger: AACCAGTGGATTACAGGGCAAACCCCTGACAGATAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTATCTGTCAGGGGTTaGCCCTGTAATCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLSVRG*PCNPLV
Trigger: AACCAGTGGATTACAGGGCAAACCCCTGACAGATAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTATCTGCCAGTTCTTCTaGACGGGGCAGGTCATCTGG +
Preference number: 5 (lower is better)
Translates to: QLITFWAPLVSFKVLINSICQFF*TGQVIW
Trigger: CCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGAT...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTGCCCACCCACCACTCCAACCCCATAAAATCTGATTCCACTTCAATCAGGTTATGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: LPTHHSNPIKSDSTSIRLCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...TAACCTGATTGAAGTGGAATCAGATTTTATGGGGTTGGAGTGGTGGGTGGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CAA 90 bp CAAGGCCTAGACGGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTTCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 5 (lower is better)
Translates to: QGLDGPEVIFRNFQILGCSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...ACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCCGTCTAGGCCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCARVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGATCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAATCAATCATTGTCTTaGGTTCAAGGCCCACACGCT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMNQSLS*VQGPHA
Trigger: AGCGTGTGGGCCTTGAACCAAAGACAATGATTGATT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAATCAATCATTGTCTTaGGTTCAAGGCCCACACGCT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYNQSLS*VQGPHA
Trigger: AGCGTGTGGGCCTTGAACCAAAGACAATGATTGATT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTTCCTGTTCCCAGGCTaGTTCAATAGTGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAFLFPG*FNSVKF
Trigger: AAACTTCACACTATTGAACAAGCCTGGGAACAGGAA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGCATCACTTACTGCCTaGCTCACACTATCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYASLTA*LTLSAN
Trigger: ATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTGCATCACTTACTGCCTaGCTCACACTATCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCIASLTA*LTLSAN
Trigger: ATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGC...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCALCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAGTAGCCTCACTCAGTaGAAGAGAGACATTATGTTG +
Preference number: 5 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGSSLTQ*KRDIML
Trigger: CAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCGTCGTAGAGACTGAATaGTTTGGCGCAGATGTTTTG +
Preference number: 5 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFVVETE*FGADVL
Trigger: CAAAACATCTGCGCCAAACAATTCAGTCTCTACGAC...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGTCGTAGAGACTGAATaGTTTGGCGCAGATGTTTTG +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYVVETE*FGADVL
Trigger: CAAAACATCTGCGCCAAACAATTCAGTCTCTACGAC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGGTCGTAGAGACTGAATaGTTTGGCGCAGATGTTTTG +
Preference number: 5 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEVVETE*FGADVL
Trigger: CAAAACATCTGCGCCAAACAATTCAGTCTCTACGAC...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTTCTGCCTAGCTCAGCTATGAGCTTTTCTCTTTCTGCAGTGGCAGGCAATCGAATTTTCATATGCCAGTaGATTACCTTTTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: FLPSSAMSFSLSAVAGNRIFICQ*ITFWAP
Trigger: AGGAGCCCAAAAGGTAATCAACTGGCATATGAAAAT...TCGATTGCCTGCCACTGCAGAAAGAGAAAAGCTCATAGCTGAGCTAGGCAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCCAGGTCAACTTCTCTTaGATCCCAGGCCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLQVNFS*IPGHLS
Trigger: AGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTG...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVRSLSS*ITLSLD
Trigger: GTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCG...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCACCTTGCTTGCATGTTaGCAATGGTTTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVTLLAC*QWFDEQ
Trigger: TTGCTCATCAAACCATTGCAAACATGCAAGCAAGGT...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRIKCL*VGTGVG
Trigger: TCCCACTCCAGTTCCTACCAACAAGCATTTTATTCG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRIKCL*VGTGVG
Trigger: TCCCACTCCAGTTCCTACCAACAAGCATTTTATTCG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGGAAAGAGAGTCATCTaGTTCTGCTACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMGKRVI*FCYCLF
Trigger: GAACAGACAGTAGCAGAACAAGATGACTCTCTTTCC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTGGAAAGAGAGTCATCTaGTTCTGCTACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCIGKRVI*FCYCLF
Trigger: GAACAGACAGTAGCAGAACAAGATGACTCTCTTTCC...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGGAAAGAGAGTCATCTaGTTCTGCTACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYGKRVI*FCYCLF
Trigger: GAACAGACAGTAGCAGAACAAGATGACTCTCTTTCC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCGATCAACGATTTGTaGAACATTGAGATGGGCCTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSINDL*NIEMGL
Trigger: GAGGCCCATCTCAATGTTCAACAAATCGTTGATCGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCATGTCGATCAACGATTaGTTGAACATTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAMSIND*LNIEMG
Trigger: GCCCATCTCAATGTTCAACAAATCGTTGATCGACAT...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTTCCAGTTCTGGGATaGTCTTTCCACTTCTACCAG +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFPVLG*SFHFYQ
Trigger: CTGGTAGAAGTGGAAAGACAATCCCAGAACTGGAAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000674971.1
ENST00000675794.1
CDS TCA 90 bp TGGTCATATTCTCTTCTGTCTCATTCTGATCTGACTGTGGGGTATTaGATGATGATCTCCTATGCAGCAGCTCTGCTTTATCTGAACTCC +
Preference number: 5 (lower is better)
Translates to: WSYSLLSHSDLTVGY*MMISYAAALLYLNS
Trigger: GGAGTTCAGATAAAGCAGAGCTGCTGCATAGGAGATCATCATTCAATACCCCACAGTCAGATCAGAATGAGACAGAAGAGAATATGACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675476.1
ENST00000675833.1
CDS CCA 90 bp AGAAACAGGGAAAACATGGACATTTATAAGCCAAGGAGAGAGGATTaGGAAAGATCTTTCCCTCTGATTGTGCAGAGGAAATCAACCCTG +
Preference number: 5 (lower is better)
Translates to: RNRENMDIYKPRRED*ERSFPLIVQRKSTL
Trigger: CAGGGTTGATTTCCTCTGCACAATCAGAGGGAAAGATCTTTCCCAATCCTCTCTCCTTGGCTTATAAATGTCCATGTTTTCCCTGTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS CCA 90 bp ATGTGGAGAATGAAAAGAATGAAGTCGTTGATGATCCAAAGTTTCTaGCTTAAGCAAATGGGTGAATGGGGTGCCCTTCAGTTAGATGGG +
Preference number: 5 (lower is better)
Translates to: MWRMKRMKSLMIQSF*LKQMGEWGALQLDG
Trigger: CCCATCTAACTGAAGGGCACCCCATTCACCCATTTGCTTAAGCCAGAAACTTTGGATCATCAACGACTTCATTCTTTTCATTCTCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAAGCATCTTGTTGGACTaGATCCTCAAGTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: SSCILRDSTSLSLDCCCASILLD*ILKFSL
Trigger: AAGAGAAAACTTGAGGATCAAGTCCAACAAGATGCT...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGGAGAGCTGCAATCTaGAAAATGGCCATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMWRAAI*KMAISL
Trigger: TAAGGAAATGGCCATTTTCAAGATTGCAGCTCTCCA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGGAGAGCTGCAATCTaGAAAATGGCCATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYWRAAI*KMAISL
Trigger: TAAGGAAATGGCCATTTTCAAGATTGCAGCTCTCCA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTCCTGTTCCCAGGCTaGTTCAATAGTGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFLFPG*FNSVKF
Trigger: AAACTTCACACTATTGAACAAGCCTGGGAACAGGAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTTCCTGTTCCCAGGCTaGTTCAATAGTGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRFLFPG*FNSVKF
Trigger: AAACTTCACACTATTGAACAAGCCTGGGAACAGGAA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 5 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFLCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAAGAGAGACATTATGTaGGTGCAACTTGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYKRDIM*VQLGNE
Trigger: CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAAGAGAGACATTATGTaGGTGCAACTTGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMKRDIM*VQLGNE
Trigger: CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGAGTAGCCTCACTCAGTaGAAGAGAGACATTATGTTG +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSSLTQ*KRDIML
Trigger: CAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCAGTAGCCTCACTCAGTaGAAGAGAGACATTATGTTG +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRSSLTQ*KRDIML
Trigger: CAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATACCTTTTGGGCTCCTTaGGTATCCTTTAAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYTFWAP*VSFKVL
Trigger: AAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCCAGGTCAACTTCTCTTaGATCCCAGGCCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFQVNFS*IPGHLS
Trigger: AGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTG...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCRSLSS*ITLSLD
Trigger: GTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCG...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMRSLSS*ITLSLD
Trigger: GTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYRSLSS*ITLSLD
Trigger: GTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATGTGTGGTGAGATTTaGGTTCCATCTCTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMMCGEI*VPSLFC
Trigger: GCAGAAAAGAGATGGAACCAAAATCTCACCACACAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTATGTGTGGTGAGATTTaGGTTCCATCTCTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCIMCGEI*VPSLFC
Trigger: GCAGAAAAGAGATGGAACCAAAATCTCACCACACAT...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATACCTTGCTTGCATGTTaGCAATGGTTTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYTLLAC*QWFDEQ
Trigger: TTGCTCATCAAACCATTGCAAACATGCAAGCAAGGT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCACCTTGCTTGCATGTTaGCAATGGTTTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCTLLAC*QWFDEQ
Trigger: TTGCTCATCAAACCATTGCAAACATGCAAGCAAGGT...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGACCTTGCTTGCATGTTaGCAATGGTTTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMTLLAC*QWFDEQ
Trigger: TTGCTCATCAAACCATTGCAAACATGCAAGCAAGGT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGCTTCACAATTTCTCTTaGCTCCTCTCTGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNELHNFS*LLSGFF
Trigger: GAAAAAGCCAGAGAGGAGCAAAGAGAAATTGTGAAG...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTTCACAATTTCTCTTaGCTCCTCTCTGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLHNFS*LLSGFF
Trigger: GAAAAAGCCAGAGAGGAGCAAAGAGAAATTGTGAAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTTCACAATTTCTCTTaGCTCCTCTCTGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCILHNFS*LLSGFF
Trigger: GAAAAAGCCAGAGAGGAGCAAAGAGAAATTGTGAAG...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSRIKCL*VGTGVG
Trigger: TCCCACTCCAGTTCCTACCAACAAGCATTTTATTCG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCGGAAAGAGAGTCATCTaGTTCTGCTACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLGKRVI*FCYCLF
Trigger: GAACAGACAGTAGCAGAACAAGATGACTCTCTTTCC...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTTGGAGCTCTTGAATTaGCTTCTTTTTGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCALELLN*LLFEPE
Trigger: TTCAGGCTCAAAAAGAAGCAAATTCAAGAGCTCCAA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATATGTCGATCAACGATTaGTTGAACATTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYMSIND*LNIEMG
Trigger: GCCCATCTCAATGTTCAACAAATCGTTGATCGACAT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCAACAGTCATGCCAGTaGTTTTTAGTTTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMQQSCQ*FLVSSA
Trigger: TGCAGAGGAAACTAAAAACAACTGGCATGACTGTTG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCAACAGTCATGCCAGTaGTTTTTAGTTTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYQQSCQ*FLVSSA
Trigger: TGCAGAGGAAACTAAAAACAACTGGCATGACTGTTG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCTCTAGATCTGACATTTaGAGCTGTGTCTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVSRSDI*SCVSRS
Trigger: AGATCTAGAGACACAGCTCAAAATGTCAGATCTAGA...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS TCA 90 bp ATGGAGAACCACTGGAAGATTCTGAGGATAGGACTTTGTGCTTTGTaGTGTGCTTTATGTTTTAAAAGGGTTACCTGGCAACTGTGTGGA +
Preference number: 5 (lower is better)
Translates to: MENHWKILRIGLCAL*CALCFKRVTWQLCG
Trigger: TCCACACAGTTGCCAGGTAACCCTTTTAAAACATAAAGCACATCACAAAGCACAAAGTCCTATCCTCAGAATCTTCCAGTGGTTCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATATTAGGTGGCATCTaGAATTCTTTCACTGTGCTC +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRILGGI*NSFTVL
Trigger: GAGCACAGTGAAAGAATTCAAGATGCCACCTAATAT...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGATATTAGGTGGCATCTaGAATTCTTTCACTGTGCTC +
Preference number: 5 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNEILGGI*NSFTVL
Trigger: GAGCACAGTGAAAGAATTCAAGATGCCACCTAATAT...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATATATTAGGTGGCATCTaGAATTCTTTCACTGTGCTC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYILGGI*NSFTVL
Trigger: GAGCACAGTGAAAGAATTCAAGATGCCACCTAATAT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATATTAGGTGGCATCTaGAATTCTTTCACTGTGCTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMILGGI*NSFTVL
Trigger: GAGCACAGTGAAAGAATTCAAGATGCCACCTAATAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GGGCCAGAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: GPEVIFRNFQILGCDLIVCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...GACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTCTGGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCACLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTAGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CAA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETRVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSRVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCAGCATCTTGTTGGACTaGATCCTCAAGTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRSILLD*ILKFSL
Trigger: AAGAGAAAACTTGAGGATCAAGTCCAACAAGATGCT...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATAGCATCTTGTTGGACTaGATCCTCAAGTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSILLD*ILKFSL
Trigger: AAGAGAAAACTTGAGGATCAAGTCCAACAAGATGCT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCTACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCAGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 5 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTCTGTGCATCCAAATaGATTTTGGTAAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFCASK*ILVSSA
Trigger: TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTCTGTGCATCCAAATaGATTTTGGTAAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFCASK*ILVSSA
Trigger: TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GAGACATTATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: ETLCWCNLAMSDFSSDCAFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...GGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAATGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGTTGGTGCAACTTGGCAATGAGCGACTTTTCATCAGACTGTGCCTGATAGTCTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: MLVQLGNERLFIRLCLIVFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...GACTATCAGGCACAGTCTGATGAAAAGTCGCTCATTGCCAAGTTGCACCAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: SEGLYFLVPRLLLCIQNFRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...GAAATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTAAGAGAGACATTATGTaGGTGCAACTTGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSKRDIM*VQLGNE
Trigger: CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTT...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAAAGAGAGACATTATGTaGGTGCAACTTGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVKRDIM*VQLGNE
Trigger: CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTT...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTTGCTGACGGTCAAAAATGTCTAGTTGGCGTTCCAGGTCAACTTCTCTTTGATAGTAGCCTCACTCAGTaGAAGAGAGACATTATGTTG +
Preference number: 5 (lower is better)
Translates to: FADGQKCLVGVPGQLLFDSSLTQ*KRDIML
Trigger: CAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT...ATCAAAGAGAAGTTGACCTGGAACGCCAACTAGACATTTTTGACCGTCAGCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTTTTGGCGCAGATGTTTaGCTCTGTTTCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFFGADV*LCFFPP
Trigger: TGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAA...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATTTTCATATGCCAGTaGATTACCTTTTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMIFICQ*ITFWAP
Trigger: AGGAGCCCAAAAGGTAATCAACTGGCATATGAAAAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTAGTGATTTGCAAGTaGCCCGTGTTTCTAGAATTA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLVICK*PVFLEL
Trigger: TAATTCTAGAAACACGGGCAACTTGCAAATCACTAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTAGTGATTTGCAAGTaGCCCGTGTTTCTAGAATTA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLVICK*PVFLEL
Trigger: TAATTCTAGAAACACGGGCAACTTGCAAATCACTAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AAGAGCAGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCCTTTTTGATTTAACCTaGCTTGCATGTTTGCAATGG +
Preference number: 5 (lower is better)
Translates to: KSSSLTQLKRDIMLVQLGLFDLT*LACLQW
Trigger: CCATTGCAAACATGCAAGCAAGGTTAAATCAAAAAG...GCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACTGCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCCTTCACAATTTCTCTTaGCTCCTCTCTGGCTTTTTC +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLLHNFS*LLSGFF
Trigger: GAAAAAGCCAGAGAGGAGCAAAGAGAAATTGTGAAG...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCACGAATAAAATGCTTGTaGGTAGGAACTGGAGTGGGA +
Preference number: 5 (lower is better)
Translates to: LNICSTFCASKLILVSSARIKCL*VGTGVG
Trigger: TCCCACTCCAGTTCCTACCAACAAGCATTTTATTCG...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCGGAAAGAGAGTCATCTaGTTCTGCTACTGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLGKRVI*FCYCLF
Trigger: GAACAGACAGTAGCAGAACAAGATGACTCTCTTTCC...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTGGAGCTCTTGAATTaGCTTCTTTTTGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLELLN*LLFEPE
Trigger: TTCAGGCTCAAAAAGAAGCAAATTCAAGAGCTCCAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTGGAGCTCTTGAATTaGCTTCTTTTTGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLELLN*LLFEPE
Trigger: TTCAGGCTCAAAAAGAAGCAAATTCAAGAGCTCCAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTTATCTGTCAGGGGTTaGCCCTGTAATCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFLSVRG*PCNPLV
Trigger: AACCAGTGGATTACAGGGCAAACCCCTGACAGATAA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTTTATCTGTCAGGGGTTaGCCCTGTAATCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFLSVRG*PCNPLV
Trigger: AACCAGTGGATTACAGGGCAAACCCCTGACAGATAA...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCCTTCTATTTTGGCTaGCCACTTTTTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSFYFG*PLFTFF
Trigger: GAAGAAGGTAAAAAGTGGCAAGCCAAAATAGAAGGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTTCCTTCTATTTTGGCTaGCCACTTTTTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCISFYFG*PLFTFF
Trigger: GAAGAAGGTAAAAAGTGGCAAGCCAAAATAGAAGGA...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGCAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTCTTTATCGGCTTaGGCAAAAAGATCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SSCILRDSTSLSLDCCCAFSLSA*AKRSFK
Trigger: TTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGAA...TGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTACAACAGTCATGCCAGTaGTTTTTAGTTTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVQQSCQ*FLVSSA
Trigger: TGCAGAGGAAACTAAAAACAACTGGCATGACTGTTG...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCATCTCGAGGAAGAGCTaGGTGGGCCCTCATATACAA +
Preference number: 5 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFISRKS*VGPHIQ
Trigger: TTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGAT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTAGCCTCACTCAGTTGAAGAGAGACATTATGTTGGTGCAACTTGGCAATGAGTCTAGATCTGACATTTaGAGCTGTGTCTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: SSLTQLKRDIMLVQLGNESRSDI*SCVSRS
Trigger: AGATCTAGAGACACAGCTCAAAATGTCAGATCTAGA...CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTCTAGATCTGACATTTaGAGCTGTGTCTCTAGATCT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMSRSDI*SCVSRS
Trigger: AGATCTAGAGACACAGCTCAAAATGTCAGATCTAGA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAATCAATCATTGTCTTaGGTTCAAGGCCTAGACGGG +
Preference number: 5 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARNQSLS*VQGLDG
Trigger: CCCGTCTAGGCCTTGAACCAAAGACAATGATTGATT...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS TCA 90 bp TCCACCTTGGATAAGGAAATCAATAAATTATCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGGTCAACTTTCATTATTTCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: STLDKEINKLSASSS*RGRSSGSTFIISFQ
Trigger: CTGGAAAGAAATAATGAAAGTTGACCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGATAATTTATTGATTTCCTTATCCAAGGTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000309041.12
ENST00000397838.8
ENST00000547926.7
ENST00000550962.6
ENST00000552770.3
ENST00000552810.6
ENST00000671822.2
ENST00000672414.2
ENST00000673058.2
ENST00000674971.1
ENST00000675230.1
ENST00000675361.1
ENST00000675408.1
ENST00000675476.1
ENST00000675559.1
ENST00000675628.1
ENST00000675794.1
ENST00000675833.1
ENST00000676074.1
ENST00000676331.1
ENST00000676351.1
ENST00000676418.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGATTTCGAAGAGCCAATaGCTCATTAACTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMISKSQ*LINFLL
Trigger: GAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAAT...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATATTTCGAAGAGCCAATaGCTCATTAACTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYISKSQ*LINFLL
Trigger: GAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAAT...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCATCAAAGATTCCTTCTGCTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: KLINLGFQMQTRIKDSFCCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...GCAGAAGGAATCTTTGATGCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000672414.2
ENST00000675794.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCCTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCCTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCATTGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: SVKSIIVFGSRPRRARSHCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...ATGACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTATGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CAA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCAGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVRVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTATCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTATCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAAAATCAATCATTGTCTTaGGTTCAAGGCCCACACGCT +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKNQSLS*VQGPHA
Trigger: AGCGTGTGGGCCTTGAACCAAAGACAATGATTGATT...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTTCATTTCTTCCGGTAAGCTGATCAACTTGGGCTTTCAAATGCAGACTCGCTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: FFISSGKLINLGFQMQTRWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...GCGAGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACCGGAAGAAATGAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000547926.7
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674971.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000674971.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATTCCTGTTCCCAGGCTaGTTCAATAGTGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCAFLFPG*FNSVKF
Trigger: AAACTTCACACTATTGAACAAGCCTGGGAACAGGAA...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTGTCACTGTTGGTTATaGATTTCTTTGCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMCHCWL*ISLPYP
Trigger: TGGATAAGGCAAAGAAATCAATAACCAACAGTGACA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTGTCACTGTTGGTTATaGATTTCTTTGCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYCHCWL*ISLPYP
Trigger: TGGATAAGGCAAAGAAATCAATAACCAACAGTGACA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGGCATCCAAATTGATTTaGGTAAGCTCAGCAAATTTG +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMASKLI*VSSANL
Trigger: CAAATTTGCTGAGCTTACCAAAATCAATTTGGATGC...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGCATCCAAATTGATTTaGGTAAGCTCAGCAAATTTG +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYASKLI*VSSANL
Trigger: CAAATTTGCTGAGCTTACCAAAATCAATTTGGATGC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTTCTGTGCATCCAAATaGATTTTGGTAAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLFCASK*ILVSSA
Trigger: TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTGCATCACTTACTGCCTaGCTCACACTATCAGCTAAT +
Preference number: 5 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFASLTA*LTLSAN
Trigger: ATTAGCTGATAGTGTGAGCAAGGCAGTAAGTGATGC...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLVPRL*LCIQNF
Trigger: GAAATTTTGAATGCACAACAACAATCTAGGGACAAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: SCILRDSTSLSLDCCCAFLVPRL*LCIQNF
Trigger: GAAATTTTGAATGCACAACAACAATCTAGGGACAAG...GAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CAGTTGCATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: QLHSEGLYFLVPRLLLCILVPRL*LCIQNF
Trigger: GAAATTTTGAATGCACAACAACAATCTAGGGACAAG...AATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAATGCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLVPRL*LCIQNF
Trigger: GAAATTTTGAATGCACAACAACAATCTAGGGACAAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTAGGGACTCTACTTCCTaGTCCCTAGATTGTTGTTGT +
Preference number: 5 (lower is better)
Translates to: ILRDSTSLSLDCCCAFKIRDSTS*SLDCCC
Trigger: ACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCT...AATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000675089.1
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCAGTAGCCTCACTCAGTaGAAGAGAGACATTATGTTG +
Preference number: 5 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLSSLTQ*KRDIML
Trigger: CAACATAATGTCTCTCTTCAACTGAGTGAGGCTACT...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCACCTTTTGGGCTCCTTaGGTATCCTTTAAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLTFWAP*VSFKVL
Trigger: AAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGT...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTATTTTCATATGCCAGTaGATTACCTTTTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETIFICQ*ITFWAP
Trigger: AGGAGCCCAAAAGGTAATCAACTGGCATATGAAAAT...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAATTTTCATATGCCAGTaGATTACCTTTTGGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVIFICQ*ITFWAP
Trigger: AGGAGCCCAAAAGGTAATCAACTGGCATATGAAAAT...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTCAGGTCAACTTCTCTTaGATCCCAGGCCATTTGTCT +
Preference number: 5 (lower is better)
Translates to: QLITFWAPLVSFKVLINSQVNFS*IPGHLS
Trigger: AGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTG...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTCTAGTGATTTGCAAGTaGCCCGTGTTTCTAGAATTA +
Preference number: 5 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSLVICK*PVFLEL
Trigger: TAATTCTAGAAACACGGGCAACTTGCAAATCACTAG...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCAATGTGTGGTGAGATTTaGGTTCCATCTCTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCAMCGEI*VPSLFC
Trigger: GCAGAAAAGAGATGGAACCAAAATCTCACCACACAT...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCAACCTTGCTTGCATGTTaGCAATGGTTTGATGAGCAA +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCATLLAC*QWFDEQ
Trigger: TTGCTCATCAAACCATTGCAAACATGCAAGCAAGGT...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTTTTTGATTTAACCTaGCTTGCATGTTTGCAATGG +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYLFDLT*LACLQW
Trigger: CCATTGCAAACATGCAAGCAAGGTTAAATCAAAAAG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGCTTTTTGATTTAACCTaGCTTGCATGTTTGCAATGG +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMLFDLT*LACLQW
Trigger: CCATTGCAAACATGCAAGCAAGGTTAAATCAAAAAG...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATGATACTTTCTTTAGTTaGACCAAGAGTGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYDTFFS*TKSEER
Trigger: TCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTATC...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTCGATCAACGATTTGTaGAACATTGAGATGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFSINDL*NIEMGL
Trigger: GAGGCCCATCTCAATGTTCAACAAATCGTTGATCGA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCAGTTCATCATTCTCTaGATCAATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYQFIIL*INFLFL
Trigger: GAGAAAGAGGAAATTGATCAAGAGAATGATGAACTG...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATCTGATGTTCTCTTTATCGGCTTaGGCAAAAAGATCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: IRYGAFSSTLVLVSFYLMFSLSA*AKRSFK
Trigger: TTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGAA...CATCAGATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp ATCAGCATCAGGTATGGTGCTTTCAGCTCCACTTTGGTCCTTGTTAGCTTCTATTTCTCTTTATCGGCTTaGGCAAAAAGATCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: ISIRYGAFSSTLVLVSFYFSLSA*AKRSFK
Trigger: TTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGAA...ATAGAAGCTAACAAGGACCAAAGTGGAGCTGAAAGCACCATACCTGATGCTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000672414.2
ENST00000674971.1
ENST00000675794.1
ENST00000676074.1
CDS-3UTR CAA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCCAACAGTCATGCCAGTaGTTTTTAGTTTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLQQSCQ*FLVSSA
Trigger: TGCAGAGGAAACTAAAAACAACTGGCATGACTGTTG...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATATCTCGAGGAAGAGCTaGGTGGGCCCTCATATACAA +
Preference number: 5 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNISRKS*VGPHIQ
Trigger: TTGTATATGAGGGCCCACCAAGCTCTTCCTCGAGAT...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS TCA 90 bp AGGAGCCTCTATTTCAGCAGAGACATGAAGTCTGGGAGCAAGCTATaGGAATATTTGGGTGAACAGTATTCTAAACAAAGGAAACAAGTA +
Preference number: 5 (lower is better)
Translates to: RSLYFSRDMKSGSKL*EYLGEQYSKQRKQV
Trigger: TACTTGTTTCCTTTGTTTAGAATACTGTTCACCCAAATATTCTCATAGCTTGCTCCCAGACTTCATGTCTCTGCTGAAATAGAGGCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS-3UTR CAA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTATATTAGGTGGCATCTaGAATTCTTTCACTGTGCTC +
Preference number: 5 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVILGGI*NSFTVL
Trigger: GAGCACAGTGAAAGAATTCAAGATGCCACCTAATAT...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCATTTCGAAGAGCCAATaGCTCATTAACTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLISKSQ*LINFLL
Trigger: GAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAAT...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCATTTCGAAGAGCCAATaGCTCATTAACTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: IQLNQSLSLVQGLDGPEVISKSQ*LINFLL
Trigger: GAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAAT...GACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAATTTCGAAGAGCCAATaGCTCATTAACTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVISKSQ*LINFLL
Trigger: GAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAAT...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAGGTTGCGCAAACTATGTAACTTAAAACATGGCTTACCCACACGCTCTCTACTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: IRLRKLCNLKHGLPTRSLLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...TAGAGAGCGTGTGGGTAAGCCATGTTTTAAGTTACATAGTTTGCGCAACCTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CAA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCTGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GTTCCAGGTCAACTTCTCTTTGATCCCAGGCCATTTGTCTTTCTTCATGAAACTTCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 5 (lower is better)
Translates to: VPGQLLFDPRPFVFLHETSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...AGTTTCATGAAGAAAGACAAATGGCCTGGGATCAAAGAGAAGTTGACCTGGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCCTCCATCTTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTATCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 5 (lower is better)
Translates to: ASIFCSLDVIDSNLPRAVSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...TACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAAGATGGAGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAGGGTTGAAGCACCTTaGTTTCTTTGGAGCTCATTT +
Preference number: 5 (lower is better)
Translates to: LMILALDGAIPSGKSIPLRVEAP*FLWSSF
Trigger: AAATGAGCTCCAAAGAAACAAAGGTGCTTCAACCCT...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTCTGTTGAGAAAGGGTaGAAGCACCTTTGTTTCTTT +
Preference number: 5 (lower is better)
Translates to: ELMILALDGAIPSGKSIPSVEKG*KHLCFF
Trigger: AAAGAAACAAAGGTGCTTCAACCCTTTCTCAACAGA...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCAATCAATCATTGTCTTaGGTTCAAGGCCCACACGCT +
Preference number: 5 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFNQSLS*VQGPHA
Trigger: AGCGTGTGGGCCTTGAACCAAAGACAATGATTGATT...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGAAGTCTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: IQLNQSLSLVQGLDGPEVWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...GACTTCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTGGTAAGCTGATCAACTaGGGCTTTCAAATGCAGACT +
Preference number: 5 (lower is better)
Translates to: VSLLVICKLPVFLELFECGKLIN*GFQMQT
Trigger: AGTCTGCATTTGAAAGCCCAAGTTGATCAGCTTACC...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCTACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTTGGAGAGCTGCAATCTaGAAAATGGCCATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFWRAAI*KMAISL
Trigger: TAAGGAAATGGCCATTTTCAAGATTGCAGCTCTCCA...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTGGAGAGCTGCAATCTaGAAAATGGCCATTTCCTTA +
Preference number: 5 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFWRAAI*KMAISL
Trigger: TAAGGAAATGGCCATTTTCAAGATTGCAGCTCTCCA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCAGTTGTCACTGTTGGTTATaGATTTCTTTGCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: CSLDVIDSNLPRAVASLSCHCWL*ISLPYP
Trigger: TGGATAAGGCAAAGAAATCAATAACCAACAGTGACA...ACTGAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCATTCTGTGCATCCAAATaGATTTTGGTAAGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPFCASK*ILVSSA
Trigger: TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAA...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAATTATGTTGGTGCAACTaGGCAATGAGCGACTTTTCA +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKLCWCN*AMSDFS
Trigger: TGAAAAGTCGCTCATTGCCAAGTTGCACCAACATAA...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTAAGAGAGACATTATGTaGGTGCAACTTGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFKRDIM*VQLGNE
Trigger: CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTT...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATTTTGGCGCAGATGTTTaGCTCTGTTTCTTCCCTCCA +
Preference number: 5 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNFGADV*LCFFPP
Trigger: TGGAGGGAAGAAACAGAGCAAAACATCTGCGCCAAA...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGTTGTTTCTCCTTCAAGGCTAATTGGCTCTTTAGCCGTTCTACTAGATTTATGTGTGGTGAGATTTaGGTTCCATCTCTTTTCTGC +
Preference number: 5 (lower is better)
Translates to: FCCFSFKANWLFSRSTRFMCGEI*VPSLFC
Trigger: GCAGAAAAGAGATGGAACCAAAATCTCACCACACAT...AAATCTAGTAGAACGGCTAAAGAGCCAATTAGCCTTGAAGGAGAAACAACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTGCAGTTTAGATGTAATTGACTCCAACTTACCAAGAGCAGTAGCCTCACTCCTTTTTGATTTAACCTaGCTTGCATGTTTGCAATGG +
Preference number: 5 (lower is better)
Translates to: FCSLDVIDSNLPRAVASLLFDLT*LACLQW
Trigger: CCATTGCAAACATGCAAGCAAGGTTAAATCAAAAAG...GAGTGAGGCTACTGCTCTTGGTAAGTTGGAGTCAATTACATCTAAACTGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATTGGAGCTCTTGAATTaGCTTCTTTTTGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCALELLN*LLFEPE
Trigger: TTCAGGCTCAAAAAGAAGCAAATTCAAGAGCTCCAA...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCTCGATCAACGATTTGTaGAACATTGAGATGGGCCTC +
Preference number: 5 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFSINDL*NIEMGL
Trigger: GAGGCCCATCTCAATGTTCAACAAATCGTTGATCGA...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAATGTCGATCAACGATTaGTTGAACATTGAGATGGGC +
Preference number: 5 (lower is better)
Translates to: LMILALDGAIPSGKSIPLMSIND*LNIEMG
Trigger: GCCCATCTCAATGTTCAACAAATCGTTGATCGACAT...TAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCTTCTATTTTGGCTaGCCACTTTTTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCASFYFG*PLFTFF
Trigger: GAAGAAGGTAAAAAGTGGCAAGCCAAAATAGAAGGA...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAACAACAGTCATGCCAGTaGTTTTTAGTTTCCTCTGCA +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKQQSCQ*FLVSSA
Trigger: TGCAGAGGAAACTAAAAACAACTGGCATGACTGTTG...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTTTTCCAGTTCTGGGATaGTCTTTCCACTTCTACCAG +
Preference number: 5 (lower is better)
Translates to: QLITFWAPLVSFKVLINSFPVLG*SFHFYQ
Trigger: CTGGTAGAAGTGGAAAGACAATCCCAGAACTGGAAA...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675794.1
CDS CCA 90 bp CCAGCTTGGAAATTATTGCAGTTATTCAGGTATAAAACAATAGCTTaGACAAGACTGGTAGTGATGTCTCAAGATACCAAGAAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: PAWKLLQLFRYKTIA*TRLVVMSQDTKKWS
Trigger: TGACCACTTCTTGGTATCTTGAGACATCACTACCAGTCTTGTCCAAGCTATTGTTTTATACCTGAATAACTGCAATAATTTCCAAGCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS-3UTR CAA 90 bp CTAAATTCAGTTAAATCAATCATTGTCTTTGGTTCAAGGCCTAGACGGGCCAGATGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LNSVKSIIVFGSRPRRARCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...TCTGGCCCGTCTAGGCCTTGAACCAAAGACAATGATTGATTTAACTGAATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675559.1
CDS-3UTR CAA 90 bp GAAGTCATCTTTAGGAACTTCCAGATTCTTGGCTGTGATCTGATAGTCCAAGTTCTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: EVIFRNFQILGCDLIVQVLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...AACTTGGACTATCAGATCACAGCCAAGAATCTGGAAGTTCCTAAAGATGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675559.1
ENST00000676351.1
CDS-3UTR CAA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGTCTTCTACTTTTGCATaGACAGCTACCATAATTGGA +
Preference number: 5 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWSSTFA*TATIIG
Trigger: TCCAATTATGGTAGCTGTCAATGCAAAAGTAGAAGA...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: VSLLVICKLPVFLELFECGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATACTTTTATAGCATCTaGTTGGACTTGATCCTCAAG +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCAYFYSI*LDLILK
Trigger: CTTGAGGATCAAGTCCAACAAGATGCTATAAAAGTA...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GAATTAATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 5 (lower is better)
Translates to: ELMILALDGAIPSGKSIPGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...AGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCATTAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATTTCCTGTTCCCAGGCTaGTTCAATAGTGTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNFLFPG*FNSVKF
Trigger: AAACTTCACACTATTGAACAAGCCTGGGAACAGGAA...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCAGCATCCAAATTGATTTaGGTAAGCTCAGCAAATTTG +
Preference number: 5 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPASKLI*VSSANL
Trigger: CAAATTTGCTGAGCTTACCAAAATCAATTTGGATGC...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATAAGAGAGACATTATGTaGGTGCAACTTGGCAATGAG +
Preference number: 5 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNKRDIM*VQLGNE
Trigger: CTCATTGCCAAGTTGCACCAACATAATGTCTCTCTT...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CAGTTGATTACCTTTTGGGCTCCTTTGGTATCCTTTAAAGTGCTTATTAACTCTACCTTTTGGGCTCCTTaGGTATCCTTTAAAGTGCTT +
Preference number: 5 (lower is better)
Translates to: QLITFWAPLVSFKVLINSTFWAP*VSFKVL
Trigger: AAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGT...AGAGTTAATAAGCACTTTAAAGGATACCAAAGGAGCCCAAAAGGTAATCAACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTTCCGAAGCCTCAGTTCATaGATTACTTTGTCTCTTGAC +
Preference number: 5 (lower is better)
Translates to: FSSSDLQVARVSRIIRMFRSLSS*ITLSLD
Trigger: GTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCG...GAACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp AGTTTCCTGTTCCCAGGCTTGTTCAATAGTGTGAAGTTTTTCCTTGGTAATCTCGATACTTTCTTTAGTTaGACCAAGAGTGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SFLFPGLFNSVKFFLGNLDTFFS*TKSEER
Trigger: TCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTATC...GAGATTACCAAGGAAAAACTTCACACTATTGAACAAGCCTGGGAACAGGAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCATCCAGATACTTTCTTTAGTTaGACCAAGAGTGAGGAAAGA +
Preference number: 5 (lower is better)
Translates to: SHYQLIHLLTSVPPSVHPDTFFS*TKSEER
Trigger: TCTTTCCTCACTCTTGGTCAAACTAAAGAAAGTATC...TGGATGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTTCAATTAGACTTTGTTTATTATCTGTCAGGGGTTTGCCCTGTAATCCACTGGCAGTTCATCATTCTCTaGATCAATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LQLDFVYYLSGVCPVIHWQFIIL*INFLFL
Trigger: GAGAAAGAGGAAATTGATCAAGAGAATGATGAACTG...CCAGTGGATTACAGGGCAAACCCCTGACAGATAATAAACAAAGTCTAATTGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCTCACACTATCAGCTAATTCATCTCTTAACATCTGTTCCACCTTCTGTGCACAGTTCATCATTCTCTaGATCAATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LLTLSANSSLNICSTFCAQFIIL*INFLFL
Trigger: GAGAAAGAGGAAATTGATCAAGAGAATGATGAACTG...TGCACAGAAGGTGGAACAGATGTTAAGAGATGAATTAGCTGATAGTGTGAGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATTCTGAGGGACTCTACTTCCTTGTCCCTAGATTGTTGTTGTGCATTCAAAATTTCCTTCTATTTTGGCTaGCCACTTTTTACCTTCTTC +
Preference number: 5 (lower is better)
Translates to: ILRDSTSLSLDCCCAFKISFYFG*PLFTFF
Trigger: GAAGAAGGTAAAAAGTGGCAAGCCAAAATAGAAGGA...AATTTTGAATGCACAACAACAATCTAGGGACAAGGAAGTAGAGTCCCTCAGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTTAACATCTGTTCCACCTTCTGTGCATCCAAATTGATTTTGGTAAGCTCAGCATTCTCTTTATCGGCTTaGGCAAAAAGATCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: LNICSTFCASKLILVSSAFSLSA*AKRSFK
Trigger: TTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGAA...TGCTGAGCTTACCAAAATCAATTTGGATGCACAGAAGGTGGAACAGATGTTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS TCA 90 bp AAATCTTCTACAACAGAATCTCGAGGAAGAGCTTGGTGGGCCCTATaGACAACAATCACAGACTCTTTACTATTCACATTTCATCTTTTT +
Preference number: 5 (lower is better)
Translates to: KSSTTESRGRAWWAL*TTITDSLLFTFHLF
Trigger: AAAAAGATGAAATGTGAATAGTAAAGAGTCTGTGATTGTTGTTCATAGGGCCCACCAAGCTCTTCCTCGAGATTCTGTTGTAGAAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676190.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAAATTTCGAAGAGCCAATaGCTCATTAACTTTCTTCTC +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKISKSQ*LINFLL
Trigger: GAGAAGAAAGTTAATGAGCAATTGGCTCTTCGAAAT...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GCAGGCAATCGAAGCCTCAGTTCATTGATTACTTTGTCTCTTGACAGTATATTTTGTCTTCCCCTCTTCTaGATAAAAGTGTTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: AGNRSLSSLITLSLDSIFCLPLF*IKVFLS
Trigger: AGAAAGAAACACTTTTATCAAGAAGAGGGGAAGACA...AAATATACTGTCAAGAGACAAAGTAATCAATGAACTGAGGCTTCGATTGCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAACTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000547926.7
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TTGCAATGGTTTGATGAGCAATTTTCAATGTGTGGTGAGATTTTGGTTCCATCTTGTAAGCTCCTGCACTaGAAGTTGATAATGATCGTT +
Preference number: 5 (lower is better)
Translates to: LQWFDEQFSMCGEILVPSCKLLH*KLIMIV
Trigger: AACGATCATTATCAACTTCAAGTGCAGGAGCTTACA...AGATGGAACCAAAATCTCACCACACATTGAAAATTGCTCATCAAACCATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATGGTGAGCATCTTAATTaGACTGTCTCGTTCCTGTAT +
Preference number: 5 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYGEHLN*TVSFLY
Trigger: ATACAGGAACGAGACAGTCAAATTAAGATGCTCACC...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGTCTAACGTTGACTGAATTTTCATATGAGTCTGTTGAGAAAGGGTTGAAGCACTGGTTAATCCTGAAGTaGCACTTCTTTTTCCTCTTT +
Preference number: 5 (lower is better)
Translates to: CLTLTEFSYESVEKGLKHWLILK*HFFFLF
Trigger: AAAGAGGAAAAAGAAGTGCAACTTCAGGATTAACCA...GTGCTTCAACCCTTTCTCAACAGACTCATATGAAAATTCAGTCAACGTTAGACA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000676351.1
CDS-3UTR CAA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTAGCATCTTGTTGGACTaGATCCTCAAGTTTTCTCTT +
Preference number: 5 (lower is better)
Translates to: VSLLVICKLPVFLELFECSILLD*ILKFSL
Trigger: AAGAGAAAACTTGAGGATCAAGTCCAACAAGATGCT...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GAGGAAGAGCTTGGTGGGCCCTCATATACAATATATCATTTTCTAAGTCAAGATTTCCTTGTCCCTAGATaGTTGTTGTGCATTCAAAAT +
Preference number: 5 (lower is better)
Translates to: EEELGGPSYTIYHFLSQDFLVPR*LLCIQN
Trigger: ATTTTGAATGCACAACAACAATCTAGGGACAAGGAA...ATCTTGACTTAGAAAATGATATATTGTATATGAGGGCCCACCAAGCTCTTCCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAACTTTTTGATTTAACCTaGCTTGCATGTTTGCAATGG +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKLFDLT*LACLQW
Trigger: CCATTGCAAACATGCAAGCAAGGTTAAATCAAAAAG...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATTTGGAGCTCTTGAATTaGCTTCTTTTTGAGCCTGAA +
Preference number: 5 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNLELLN*LLFEPE
Trigger: TTCAGGCTCAAAAAGAAGCAAATTCAAGAGCTCCAA...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATGATACTGGCACTAGATGGTGCTATCCCATCAGGTAAGTCAATTCCTTTAAAATTCTCTTTATCGGCTTaGGCAAAAAGATCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: MILALDGAIPSGKSIPLKFSLSA*AKRSFK
Trigger: TTTGAAGGATCTTTTTGCCAAAGCCGATAAAGAGAA...TTTTAAAGGAATTGACTTACCTGATGGGATAGCACCATCTAGTGCCAGTATCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp GTTTCTCTTCTAGTGATTTGCAAGTTGCCCGTGTTTCTAGAATTATTCGAATGTGGTGTTCCAAGTTACTaGTTCTTTGAACAAGCATAT +
Preference number: 5 (lower is better)
Translates to: VSLLVICKLPVFLELFECGVPSY*FFEQAY
Trigger: ATATGCTTGTTCAAAGAACAAGTAACTTGGAACACC...ACATTCGAATAATTCTAGAAACACGGGCAACTTGCAAATCACTAGAAGAGAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp ATCAACGATTTGTTGAACATTGAGATGGGCCTCTTTTTGAGAAGTTGCAGAAATTGTCACTGTTGGTTATaGATTTCTTTGCCTTATCCA +
Preference number: 5 (lower is better)
Translates to: INDLLNIEMGLFLRSCRNCHCWL*ISLPYP
Trigger: TGGATAAGGCAAAGAAATCAATAACCAACAGTGACA...ATTTCTGCAACTTCTCAAAAAGAGGCCCATCTCAATGTTCAACAAATCGTTGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATCTAGTGATTTGCAAGTaGCCCGTGTTTCTAGAATTA +
Preference number: 5 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYLVICK*PVFLEL
Trigger: TAATTCTAGAAACACGGGCAACTTGCAAATCACTAG...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATCTAGTGATTTGCAAGTaGCCCGTGTTTCTAGAATTA +
Preference number: 5 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNLVICK*PVFLEL
Trigger: TAATTCTAGAAACACGGGCAACTTGCAAATCACTAG...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS TCA 90 bp CCTTGTTTAGTGGGGAAGCACAAAGAATGTGTGTTTAATATGATATaGTGTAATATAGTGCCAGATGGTAGGAAGAGCTATCAAGAAAAA +
Preference number: 5 (lower is better)
Translates to: PCLVGKHKECVFNMI*CNIVPDGRKSYQEK
Trigger: TTTTTCTTGATAGCTCTTCCTACCATCTGGCACTATATTACATCATATCATATTAAACACACATTCTTTGTGCTTCCCCACTAAACAAGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATCTCCTGCACTTGAAGTaGATAATGATCGTTTTCTTT +
Preference number: 5 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNLLHLK*IMIVFF
Trigger: AAAGAAAACGATCATTATCAACTTCAAGTGCAGGAG...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp CTGTTGCACAATTTCTTCTTCAAGACTGCTGATTGTACGTTCATATTCAGAAATCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: LLHNFFFKTADCTFIFRNLVPRL*LCIQNF
Trigger: GAAATTTTGAATGCACAACAACAATCTAGGGACAAG...ATTTCTGAATATGAACGTACAATCAGCAGTCTTGAAGAAGAAATTGTGCAACAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATCTTGTCCCTAGATTGTaGTTGTGCATTCAAAATTTC +
Preference number: 5 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYLVPRL*LCIQNF
Trigger: GAAATTTTGAATGCACAACAACAATCTAGGGACAAG...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS-3UTR CAA 90 bp TGTTTTCACACTCCAGGTGTTCCAAGTTACTTGTTCTTTGAACAAGCATATTATCAGTTCATCATTCTCTaGATCAATTTCCTCTTTCTC +
Preference number: 5 (lower is better)
Translates to: CFHTPGVPSYLFFEQAYYQFIIL*INFLFL
Trigger: GAGAAAGAGGAAATTGATCAAGAGAATGATGAACTG...ATAATATGCTTGTTCAAAGAACAAGTAACTTGGAACACCTGGAGTGTGAAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000672414.2
ENST00000675794.1
ENST00000676448.1
CDS TCA 72 bp TACCGCAACCACCAAGCTGGACCCGGCCGCGGGCCCTaGCAGATCCCTATCGCGGTTCCACGCGGACTCTGG +
Preference number: 6 (lower is better)
Translates to: YRNHQAGPGRGP*QIPIAVPRGLW
Trigger: CCAGAGTCCGCGTGGAACCGCGATAGGGATCTGTCAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGGTA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000309041.12
ENST00000397838.8
ENST00000547926.7
ENST00000552770.3
ENST00000552810.6
ENST00000671822.2
ENST00000672414.2
ENST00000673058.2
ENST00000674971.1
ENST00000675230.1
ENST00000675408.1
ENST00000675476.1
ENST00000675559.1
ENST00000675628.1
ENST00000675794.1
ENST00000675833.1
ENST00000676074.1
ENST00000676331.1
ENST00000676351.1
ENST00000676418.1
ENST00000676448.1
CDS CCA 72 bp ACCAGCGGAGGCCTCTCACTACCGCAACCACCAAGCTaGACCCGGCCGCGGGCCCTGACAGATCCCTATCGC +
Preference number: 6 (lower is better)
Translates to: TSGGLSLPQPPS*TRPRALTDPYR
Trigger: GCGATAGGGATCTGTCAGGGCCCGCGGCCGGGTCCAGCTTGGTGGTTGCGGTAGTGAGAGGCCTCCGCTGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 21 transcripts:
ENST00000309041.12
ENST00000397838.8
ENST00000547926.7
ENST00000552770.3
ENST00000552810.6
ENST00000671822.2
ENST00000672414.2
ENST00000673058.2
ENST00000674971.1
ENST00000675230.1
ENST00000675408.1
ENST00000675476.1
ENST00000675559.1
ENST00000675628.1
ENST00000675794.1
ENST00000675833.1
ENST00000676074.1
ENST00000676331.1
ENST00000676351.1
ENST00000676418.1
ENST00000676448.1
CDS CCA 72 bp TGGAACCGAAGCAAGGCAGTATTAGGGACCCGAGGCTaGAAGGGCGGGGTAGCTATGCTGTGGCACACGGGC +
Preference number: 6 (lower is better)
Translates to: WNRSKAVLGTRG*KGGVAMLWHTG
Trigger: GCCCGTGTGCCACAGCATAGCTACCCCGCCCTTCCAGCCTCGGGTCCCTAATACTGCCTTGCTTCGGTTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675361.1
CDS TCA 72 bp GTTATACAGGCACATAGGCTGGAGATCAGTGGCACATaGTCACAGCTCACTGCAGCCCCCAACTTCCTGGGC +
Preference number: 6 (lower is better)
Translates to: VIQAHRLEISGT*SQLTAAPNFLG
Trigger: GCCCAGGAAGTTGGGGGCTGCAGTGAGCTGTGATCATGTGCCACTGATCTCCAGCCTATGTGCCTGTATAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000676363.1
CDS TCA 72 bp GCAATCTTCCTGCCCCTGCCTCCCAAAGTGATTAAATaGGTAAGCCACAGCATCCTGCCTGAGCCTAACACA +
Preference number: 6 (lower is better)
Translates to: AIFLPLPPKVIK*VSHSILPEPNT
Trigger: TGTGTTAGGCTCAGGCAGGATGCTGTGGCTTACTCATTTAATCACTTTGGGAGGCAGGGGCAGGAAGATTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS CAA 72 bp GATGTACCTAAGAACTTGAAGCTCCCGTTTAAGGCCTaGCTCTGTCTCAGCACCTTCAGGAACATGTTTAAG +
Preference number: 6 (lower is better)
Translates to: DVPKNLKLPFKA*LCLSTFRNMFK
Trigger: CTTAAACATGTTCCTGAAGGTGCTGAGACAGAGCAAGGCCTTAAACGGGAGCTTCAAGTTCTTAGGTACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS TCA 72 bp CTGATTGTGCAGAGGAAATCAACCCTGCTGATGTCTTaGTTTTGGACTTCTAGGTCTCCAGAACTAAGACCA +
Preference number: 6 (lower is better)
Translates to: LIVQRKSTLLMS*FWTSRSPELRP
Trigger: TGGTCTTAGTTCTGGAGACCTAGAAGTCCAAAATCAAGACATCAGCAGGGTTGATTTCCTCTGCACAATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS TCA 72 bp CAACTGTGTGGAGACAGCCCAGAAATAGAAATAGGGTaGAATAATCCAAGAGTGGAAGCTGAGATACCAGCT +
Preference number: 6 (lower is better)
Translates to: QLCGDSPEIEIG*NNPRVEAEIPA
Trigger: AGCTGGTATCTCAGCTTCCACTCTTGGATTATTTCACCCTATTTCTATTTCTGGGCTGTCTCCACACAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS TCA 72 bp TCTCTTCTGTCTCATTCTGATCTGACTGTGGGGTATTaGATGATGATCTCCTATGCAGCAGCTCTGCTTTAT +
Preference number: 6 (lower is better)
Translates to: SLLSHSDLTVGY*MMISYAAALLY
Trigger: ATAAAGCAGAGCTGCTGCATAGGAGATCATCATTCAATACCCCACAGTCAGATCAGAATGAGACAGAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675476.1
ENST00000675833.1
CDS CCA 72 bp ATGAAAAGAATGAAGTCGTTGATGATCCAAAGTTTCTaGCTTAAGCAAATGGGTGAATGGGGTGCCCTTCAG +
Preference number: 6 (lower is better)
Translates to: MKRMKSLMIQSF*LKQMGEWGALQ
Trigger: CTGAAGGGCACCCCATTCACCCATTTGCTTAAGCCAGAAACTTTGGATCATCAACGACTTCATTCTTTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS CAA 72 bp GCAGTAAACAAAACCAAGTCCGTGTCACCACGGAACTaGCATTCTGGCGAAGGAAAGACAGTCAATAATAAA +
Preference number: 6 (lower is better)
Translates to: AVNKTKSVSPRN*HSGEGKTVNNK
Trigger: TTTATTATTGACTGTCTTTCCTTCGCCAGAATGCAAGTTCCGTGGTGACACGGACTTGGTTTTGTTTACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675894.1
CDS CAA 90 bp ACAAACATGGCAGTAAACAAAACCAAGTCCGTGTCACCACGGAACTaGCATTCTGGCGAAGGAAAGACAGTCAATAATAAACCAGTAAGT +
Preference number: 6 (lower is better)
Translates to: TNMAVNKTKSVSPRN*HSGEGKTVNNKPVS
Trigger: ACTTACTGGTTTATTATTGACTGTCTTTCCTTCGCCAGAATGCAAGTTCCGTGGTGACACGGACTTGGTTTTGTTTACTGCCATGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675894.1
CDS TCA 72 bp ACAACAGAATCTCGAGGAAGAGCTTGGTGGGCCCTATaGACAACAATCACAGACTCTTTACTATTCACATTT +
Preference number: 6 (lower is better)
Translates to: TTESRGRAWWAL*TTITDSLLFTF
Trigger: AAATGTGAATAGTAAAGAGTCTGTGATTGTTGTTCATAGGGCCCACCAAGCTCTTCCTCGAGATTCTGTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000676190.1
CDS TCA 72 bp GATAAGGAAATCAATAAATTATCTGCCAGTTCTTCTTaGCGGGGCAGGTCATCTGGGTCAACTTTCATTATT +
Preference number: 6 (lower is better)
Translates to: DKEINKLSASSS*RGRSSGSTFII
Trigger: AATAATGAAAGTTGACCCAGATGACCTGCCCCGTCAAGAAGAACTGGCAGATAATTTATTGATTTCCTTATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 23 transcripts:
ENST00000309041.12
ENST00000397838.8
ENST00000547926.7
ENST00000550962.6
ENST00000552770.3
ENST00000552810.6
ENST00000671822.2
ENST00000672414.2
ENST00000673058.2
ENST00000674971.1
ENST00000675230.1
ENST00000675361.1
ENST00000675408.1
ENST00000675476.1
ENST00000675559.1
ENST00000675628.1
ENST00000675794.1
ENST00000675833.1
ENST00000676074.1
ENST00000676331.1
ENST00000676351.1
ENST00000676418.1
ENST00000676448.1
CDS TCA 72 bp ATTTCCCTGAGACAAAGTCATACCATAAAATCAGTCTaGAAACATCAGTTACTTAGAAGACTCCAGTCCTGG +
Preference number: 6 (lower is better)
Translates to: ISLRQSHTIKSV*KHQLLRRLQSW
Trigger: CCAGGACTGGAGTCTTCTAAGTAACTGATGTTTTCAGACTGATTTTATGGTATGACTTTGTCTCAGGGAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000676331.1
ENST00000676363.1
CDS TCA 72 bp AATGATCCTATGGTCATATTCTCTTCTGTCTCATTCTaGTCTGACTGTGGGGTATTGAATGATGATCTCCTA +
Preference number: 6 (lower is better)
Translates to: NDPMVIFSSVSF*SDCGVLNDDLL
Trigger: TAGGAGATCATCATTCAATACCCCACAGTCAGATCAGAATGAGACAGAAGAGAATATGACCATAGGATCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000675476.1
ENST00000675833.1
CDS CAA 72 bp TCTATGGTGGTTTTACTAGTCCAAAATAAAGCACGATaGTTATCTAACCGTTATGGGTTGAACTGTGTTCCC +
Preference number: 6 (lower is better)
Translates to: SMVVLLVQNKAR*LSNRYGLNCVP
Trigger: GGGAACACAGTTCAACCCATAACGGTTAGATAACAATCGTGCTTTATTTTGGACTAGTAAAACCACCATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS TCA 72 bp CTGGAATACAAAAGCCTTCACGTTTTTCTTAATATCTaGCCTGATGGCATTTGCAAGTGTGGTTTCGTTATA +
Preference number: 6 (lower is better)
Translates to: LEYKSLHVFLNI*PDGICKCGFVI
Trigger: TATAACGAAACCACACTTGCAAATGCCATCAGGTCAGATATTAAGAAAAACGTGAAGGCTTTTGTATTCCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS CAA 72 bp CAAAATAAAGCACGATTGTTATCTAACCGTTATGGGTaGAACTGTGTTCCCCTTACCCTCCACATTTATATA +
Preference number: 6 (lower is better)
Translates to: QNKARLLSNRYG*NCVPLTLHIYI
Trigger: TATATAAATGTGGAGGGTAAGGGGAACACAGTTCAACCCATAACGGTTAGATAACAATCGTGCTTTATTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS CAA 90 bp TTACTAGTCCAAAATAAAGCACGATTGTTATCTAACCGTTATGGGTaGAACTGTGTTCCCCTTACCCTCCACATTTATATATTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: LLVQNKARLLSNRYG*NCVPLTLHIYILKS
Trigger: TGACTTTAATATATAAATGTGGAGGGTAAGGGGAACACAGTTCAACCCATAACGGTTAGATAACAATCGTGCTTTATTTTGGACTAGTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS TCA 72 bp AAAATAAAGCACGATTGTTATCTAACCGTTATGGGTTaGACTGTGTTCCCCTTACCCTCCACATTTATATAT +
Preference number: 6 (lower is better)
Translates to: KIKHDCYLTVMG*TVFPLPSTFIY
Trigger: ATATATAAATGTGGAGGGTAAGGGGAACACAGTTCAACCCATAACGGTTAGATAACAATCGTGCTTTATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674889.1
CDS GCA 72 bp AAGGTGCTGACTAACGATTCTAGATTTCTTGAAGACTaGAGACATGGTGCTTTAAAAATCTCTCTTATTGTA +
Preference number: 6 (lower is better)
Translates to: KVLTNDSRFLED*RHGALKISLIV
Trigger: TACAATAAGAGAGATTTTTAAAGCACCATGTCTGCAGTCTTCAAGAAATCTAGAATCGTTAGTCAGCACCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000675476.1
ENST00000675833.1
CDS TCA 72 bp AAAGTTGGCACAACATTAAGAACTGGTGAATCTATATaGAGGGTATGTGGGTGGTTATTGTTTTTCTTTTTC +
Preference number: 6 (lower is better)
Translates to: KVGTTLRTGESI*RVCGWLLFFFF
Trigger: GAAAAAGAAAAACAATAACCACCCACATACCCTTCATATAGATTCACCAGTTCTTAATGTTGTGCCAACTTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000676363.1
CDS CCA 72 bp AAATTATTGCAGTTATTCAGGTATAAAACAATAGCTTaGACAAGACTGGTAGTGATGTCTCAAGATACCAAG +
Preference number: 6 (lower is better)
Translates to: KLLQLFRYKTIA*TRLVVMSQDTK
Trigger: CTTGGTATCTTGAGACATCACTACCAGTCTTGTCCAAGCTATTGTTTTATACCTGAATAACTGCAATAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000675628.1
ENST00000676181.1
ENST00000676190.1
CDS CAA 72 bp CAAGACAATATAAGAGTCAACTTTAAAGGACTCTCTTaGGCTAAAGTTGAGACAAAAGAATATGACTCCAAC +
Preference number: 6 (lower is better)
Translates to: QDNIRVNFKGLS*AKVETKEYDSN
Trigger: GTTGGAGTCATATTCTTTTGTCTCAACTTTAGCCAAAGAGAGTCCTTTAAAGTTGACTCTTATATTGTCTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000676363.1
CDS CAA 72 bp ACTTTACTTGGGAATGAACCTGTTCTTCTTCTAATGTaGCTACTTGTGATTTATCCATGTCAGCTCTATTTT +
Preference number: 6 (lower is better)
Translates to: TLLGNEPVLLLM*LLVIYPCQLYF
Trigger: AAAATAGAGCTGACATGGATAAATCACAAGTAGCAACATTAGAAGAAGAACAGGTTCATTCCCAAGTAAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000675476.1
ENST00000675833.1