RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP250 (Homo sapiens)

Ensembl gene IDs: ENSG00000126001

Ensembl transcript IDs: ENST00000397524.5, ENST00000397527.6, ENST00000420564.5, ENST00000422671.1, ENST00000425096.1, ENST00000425525.1, ENST00000425934.5, ENST00000446710.5, ENST00000461386.5, ENST00000465987.1, ENST00000474829.1, ENST00000476146.5, ENST00000487467.1, ENST00000621352.1

Found 1166 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCAGCACCCGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTaGCCAGCCTCTGACGACTCTTGTCCCCTCCTGCTTTCAGGCCTT +
Preference number: 1 (lower is better)
Translates to: GQHPPDLSTPRKQEH*PASDDSCPLLLSGL
Trigger: AAGGCCTGAAAGCAGGAGGGGACAAGAGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCGGGTGCTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp GGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGATCCTTaGGAGAACAGGGGCAGCACCCGCCGGACCTCAGCACTCCCCGGA +
Preference number: 1 (lower is better)
Translates to: GGDGHCSNTQSTWDP*ENRGSTRRTSALPG
Trigger: TCCGGGGAGTGCTGAGGTCCGGCGGGTGCTGCCCCTGTTCTCTCAAGGATCCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp TCTGCCTGGTTTGATCAGCACTTCAGATGGGCCCTGAAGCCCCGATaGAACTGGAGACCACGCCATCTCCAGAGGCCGGTGGATGCTCGG +
Preference number: 1 (lower is better)
Translates to: SAWFDQHFRWALKPR*NWRPRHLQRPVDAR
Trigger: CCGAGCATCCACCGGCCTCTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAACCAGGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GGCGGTATGACCAGTGGGGGCCCCAGACCTGGCGCAGACAGCCTTTaGCACTTTGGTGTCAACATTGATCTTGCCCTCCCTGTGCAGCCT +
Preference number: 1 (lower is better)
Translates to: GGMTSGGPRPGADSL*HFGVNIDLALPVQP
Trigger: AGGCTGCACAGGGAGGGCAAGATCAATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCCAGGTCTGGGGCCCCCACTGGTCATACCGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp TGGTTTGATCAGCACTTCAGATGGGCCCTGAAGCCCCGATGCAACTaGAGACCACGCCATCTCCAGAGGCCGGTGGATGCTCGGTCCTGG +
Preference number: 1 (lower is better)
Translates to: WFDQHFRWALKPRCN*RPRHLQRPVDARSW
Trigger: CCAGGACCGAGCATCCACCGGCCTCTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp AGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTaGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTC +
Preference number: 1 (lower is better)
Translates to: RVWVRRAKFSCRAFP*ATFSSPCSCRAWAL
Trigger: GAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR TCA 90 bp AGCATGGTGTGTCTGCCTGGTTTGATCAGCACTTCAGATGGGCCCTaGAGCCCCGATGCAACTGGAGACCACGCCATCTCCAGAGGCCGG +
Preference number: 1 (lower is better)
Translates to: SMVCLPGLISTSDGP*SPDATGDHAISRGR
Trigger: CCGGCCTCTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAACCAGGCAGACACACCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACTTGCCTaGGCCCTGGCTTCTACGACAGCTGCTTGCAGGTGTTCCACCTGG +
Preference number: 1 (lower is better)
Translates to: RAVLRSSSRMPAALA*ALASTTAACRCSTW
Trigger: CCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAACGGCTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 90 bp CTCTTCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTaGTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCC +
Preference number: 1 (lower is better)
Translates to: LFSASARSTCKAFLA*SAASILLHTDWFSS
Trigger: GGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGAAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
3UTR TCA 90 bp GCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTaGCGACTCTTGTCCCCTCCTGCTTTCAGGCCTTTCCAGCCAGTA +
Preference number: 1 (lower is better)
Translates to: AGPQHSPETRTLPSL*RLLSPPAFRPFQPV
Trigger: TACTGGCTGGAAAGGCCTGAAAGCAGGAGGGGACAAGAGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp GCCAGGCTTTTCCTTTGGCAAACCTGTAGGTGTGCGGAGGGGCCATaGCCCATGACACAGTCTTCTGTCTGTGTGCTCCTGGCTGTGGCT +
Preference number: 1 (lower is better)
Translates to: ARLFLWQTCRCAEGP*PMTQSSVCVLLAVA
Trigger: AGCCACAGCCAGGAGCACACAGACAGAAGACTGTGTCATGGGTCATGGCCCCTCCGCACACCTACAGGTTTGCCAAAGGAAAAGCCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CCCCAGACCTGGCGCAGACAGCCTTTGGCACTTTGGTGTCAACATTaGTCTTGCCCTCCCTGTGCAGCCTGTAACTGTACACTCCCCACC +
Preference number: 1 (lower is better)
Translates to: PQTWRRQPLALWCQH*SCPPCAACNCTLPT
Trigger: GGTGGGGAGTGTACAGTTACAGGCTGCACAGGGAGGGCAAGATCAATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCCAGGTCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp TTACTTCCTCTTCCTGGGAACACCCGCCGACCTGGGGCTCCTGGGTaGCTAACAGAGCCAGGCTTTTCCTTTGGCAAACCTGTAGGTGTG +
Preference number: 1 (lower is better)
Translates to: LLPLPGNTRRPGAPG*LTEPGFSFGKPVGV
Trigger: CACACCTACAGGTTTGCCAAAGGAAAAGCCTGGCTCTGTTAGGCACCCAGGAGCCCCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp CAGGGTTGCAGATTTACTTCCTCTTCCTGGGAACACCCGCCGACCTaGGGCTCCTGGGTGCCTAACAGAGCCAGGCTTTTCCTTTGGCAA +
Preference number: 1 (lower is better)
Translates to: QGCRFTSSSWEHPPT*GSWVPNRARLFLWQ
Trigger: TTGCCAAAGGAAAAGCCTGGCTCTGTTAGGCACCCAGGAGCCCCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAATCTGCAACCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GGCTGGACTGCCAGGGACTCCTCCCGTCTGCTGGATTCACCATTCTaGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTCC +
Preference number: 1 (lower is better)
Translates to: GWTARDSSRLLDSPF*LYPATCDKVRKGGS
Trigger: GGAGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAATCCAGCAGACGGGAGGAGTCCCTGGCAGTCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp CCCCGCATCTACAAAGCCTGCCTTCACCAGCATGGTGTGTCTGCCTaGTTTGATCAGCACTTCAGATGGGCCCTGAAGCCCCGATGCAAC +
Preference number: 1 (lower is better)
Translates to: PRIYKACLHQHGVSA*FDQHFRWALKPRCN
Trigger: GTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAACCAGGCAGACACACCATGCTGGTGAAGGCAGGCTTTGTAGATGCGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp TTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACTTGCCTGAGCCCTaGCTTCTACGACAGCTGCTTGCAGGTGTTCCACCTGGGCTGTCA +
Preference number: 1 (lower is better)
Translates to: FSGLLPGCQQHLPEP*LLRQLLAGVPPGLS
Trigger: TGACAGCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 90 bp CTAGAAGTTCTGCCACTGGCCCCAGAGCTGCAGAGGTTCTGTGGCTaGTCAATTCAGCCCCGCATCTACAAAGCCTGCCTTCACCAGCAT +
Preference number: 1 (lower is better)
Translates to: LEVLPLAPELQRFCG*SIQPRIYKACLHQH
Trigger: ATGCTGGTGAAGGCAGGCTTTGTAGATGCGGGGCTGAATTGAGCAGCCACAGAACCTCTGCAGCTCTGGGGCCAGTGGCAGAACTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp GAGGGGAATGTAGAGTCTGTGACCATGGCTTCCCACTTTTCTCAGTaGCCGGTGTCTGAGTCAGCATGCCACTTGCCATGTGCTCTGCCC +
Preference number: 1 (lower is better)
Translates to: EGNVESVTMASHFSQ*PVSESACHLPCALP
Trigger: GGGCAGAGCACATGGCAAGTGGCATGCTGACTCAGACACCGGGCACTGAGAAAAGTGGGAAGCCATGGTCACAGACTCTACATTCCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp TCTTGCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTaGAGAGCCTGGGCTCTCTCACGCTCACTCTCTACTTCCTCATTT +
Preference number: 1 (lower is better)
Translates to: SCRAFPWATFSSPCS*RAWALSRSLSTSSF
Trigger: AAATGAGGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 90 bp AAATTCTCTTGCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTaGTCTTGCAGAGCCTGGGCTCTCTCACGCTCACTCTCTACTTCC +
Preference number: 1 (lower is better)
Translates to: KFSCRAFPWATFSSP*SCRAWALSRSLSTS
Trigger: GGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAGAATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 90 bp GGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTaGTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCT +
Preference number: 1 (lower is better)
Translates to: GRPAKHFSPALRPPF*CTQTGSPPLTGEAA
Trigger: AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
3UTR CCA 90 bp AGATTTACTTCCTCTTCCTGGGAACACCCGCCGACCTGGGGCTCCTaGGTGCCTAACAGAGCCAGGCTTTTCCTTTGGCAAACCTGTAGG +
Preference number: 1 (lower is better)
Translates to: RFTSSSWEHPPTWGS*VPNRARLFLWQTCR
Trigger: CCTACAGGTTTGCCAAAGGAAAAGCCTGGCTCTGTTAGGCACCCAGGAGCCCCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp TGGTGGCCAATTGCACCTTCCTCAAGTACATCCACGAGAACTGGCTaGACTGCCAGGGACTCCTCCCGTCTGCTGGATTCACCATTCTGG +
Preference number: 1 (lower is better)
Translates to: WWPIAPSSSTSTRTG*TARDSSRLLDSPFW
Trigger: CCAGAATGGTGAATCCAGCAGACGGGAGGAGTCCCTGGCAGTCCAGCCAGTTCTCGTGGATGTACTTGAGGAAGGTGCAATTGGCCACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GCTGGCAGTCCCATGTGGGAAGCAGAGCAGCAAAGGTCCTTGGGTTaGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGATC +
Preference number: 1 (lower is better)
Translates to: AGSPMWEAEQQRSLG*EVMVTALTHKARGI
Trigger: GATCCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCTTTGCTGCTCTGCTTCCCACATGGGACTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTaGGCTCTCTCACGCTCACTCTCTACTTCCTCATTTTTCAGCTTC +
Preference number: 1 (lower is better)
Translates to: AFPWATFSSPCSCRA*ALSRSLSTSSFFSF
Trigger: GAAGCTGAAAAATGAGGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR TCA 90 bp AGAGGCAGTACATGTCCCTCAGCCAGGGCAAGGCACCCCTCTGGGTaGTTCCATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGG +
Preference number: 1 (lower is better)
Translates to: RGSTCPSARARHPSG*FHREQANAICLIPR
Trigger: CCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTATGGAATCACCCAGAGGGGTGCCTTGCCCTGGCTGAGGGACATGTACTGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CTCCCGTCTGCTGGATTCACCATTCTGGTTATACCCTGCCACATGTaGCAAGGTCAGGAAAGGAGGCTCCGGCCTCATGCCCTTAGGCAA +
Preference number: 1 (lower is better)
Translates to: LPSAGFTILVIPCHM*QGQERRLRPHALRQ
Trigger: TTGCCTAAGGGCATGAGGCCGGAGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAATCCAGCAGACGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CATCTACAAAGCCTGCCTTCACCAGCATGGTGTGTCTGCCTGGTTTaGTCAGCACTTCAGATGGGCCCTGAAGCCCCGATGCAACTGGAG +
Preference number: 1 (lower is better)
Translates to: HLQSLPSPAWCVCLV*SALQMGPEAPMQLE
Trigger: CTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAACCAGGCAGACACACCATGCTGGTGAAGGCAGGCTTTGTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CCCTTCATCCTCCCTTGCCTGCTTCTTAAGTGTGGTGAGCAGAGTTaGGCTTGCACTCCTCCTCAGCTGTGCCCAGAATCATGTGGAGGG +
Preference number: 1 (lower is better)
Translates to: PFILPCLLLKCGEQS*ACTPPQLCPESCGG
Trigger: CCCTCCACATGATTCTGGGCACAGCTGAGGAGGAGTGCAAGCTCAACTCTGCTCACCACACTTAAGAAGCAGGCAAGGGAGGATGAAGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp GGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACATTaGATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCCTTTAGCAGG +
Preference number: 1 (lower is better)
Translates to: GHRPLNQPQGGHRTH*MPPLLLAFSPAFSR
Trigger: CCTGCTAAAGGCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR GCA 90 bp CAACAGAACTCCCCTGCACTTAAAGCACCCCGAATACTCATGGCCTaGATGAGAACACCCACATGCTGTGGGTGTCGAAGCCTCCAGACC +
Preference number: 1 (lower is better)
Translates to: QQNSPALKAPRILMA*MRTPTCCGCRSLQT
Trigger: GGTCTGGAGGCTTCGACACCCACAGCATGTGGGTGTTCTCATGCAGGCCATGAGTATTCGGGGTGCTTTAAGTGCAGGGGAGTTCTGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GGGTACATTCAGTTTTTCTGCCTTCAGGGTGCTGGCAGTCCCATGTaGGAAGCAGAGCAGCAAAGGTCCTTGGGTTGGGAGGTGATGGTC +
Preference number: 1 (lower is better)
Translates to: GYIQFFCLQGAGSPM*EAEQQRSLGWEVMV
Trigger: GACCATCACCTCCCAACCCAAGGACCTTTGCTGCTCTGCTTCCCACATGGGACTGCCAGCACCCTGAAGGCAGAAAAACTGAATGTACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp ATCATCCACAAGCTCGAGTGTGAGGGCAAGAGCACAGTCTACACTTaGACTGAAGGCCAGCCCTGCTCTGAATATCTGGTGGGGAGGGGA +
Preference number: 1 (lower is better)
Translates to: IIHKLECEGKSTVYT*TEGQPCSEYLVGRG
Trigger: TCCCCTCCCCACCAGATATTCAGAGCAGGGCTGGCCTTCAGTTCAAGTGTAGACTGTGCTCTTGCCCTCACACTCGAGCTTGTGGATGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp AGAACTCCCCTGCACTTAAAGCACCCCGAATACTCATGGCCTGCATaGGAACACCCACATGCTGTGGGTGTCGAAGCCTCCAGACCTAGT +
Preference number: 1 (lower is better)
Translates to: RTPLHLKHPEYSWPA*EHPHAVGVEASRPS
Trigger: ACTAGGTCTGGAGGCTTCGACACCCACAGCATGTGGGTGTTCTCATGCAGGCCATGAGTATTCGGGGTGCTTTAAGTGCAGGGGAGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp CTTCCCACTTTTCTCAGTGCCCGGTGTCTGAGTCAGCATGCCACTTaGCATGTGCTCTGCCCTGTGGGACAAGAATGTAGCCTTCAATGG +
Preference number: 1 (lower is better)
Translates to: LPTFLSARCLSQHAT*HVLCPVGQECSLQW
Trigger: CCATTGAAGGCTACATTCTTGTCCCACAGGGCAGAGCACATGGCAAGTGGCATGCTGACTCAGACACCGGGCACTGAGAAAAGTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp GTCTATAATCCCAGATACACAGGAGGCCGAGGCAGGAGAATTGCTTaGACCCAGGAGGTGGATGTTGCCACTGGTGAGCCGAGATTACGT +
Preference number: 1 (lower is better)
Translates to: VYNPRYTGGRGRRIA*TQEVDVATGEPRLR
Trigger: ACGTAATCTCGGCTCACCAGTGGCAACATCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCGGCCTCCTGTGTATCTGGGATTATAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp TTTGAAAGGGCCTTCAAGCCCTCTCTTTGTCCAAGATGCTCTGTTTaGCTCTCCCTGGCCTCACTGAGAGCAGCCAGTGGGTCTCTTCTG +
Preference number: 1 (lower is better)
Translates to: FERAFKPSLCPRCSV*LSLASLRAASGSLL
Trigger: CAGAAGAGACCCACTGGCTGCTCTCAGTGAGGCCAGGGAGAGTCAAACAGAGCATCTTGGACAAAGAGAGGGCTTGAAGGCCCTTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CCCCTGGACTCCACACAACCCGTGCATCCAACTGGCTTGACACTTTaGAAGGGCCTTCAAGCCCTCTCTTTGTCCAAGATGCTCTGTTTG +
Preference number: 1 (lower is better)
Translates to: PLDSTQPVHPTGLTL*KGLQALSLSKMLCL
Trigger: CAAACAGAGCATCTTGGACAAAGAGAGGGCTTGAAGGCCCTTTCAAAGTGTCAAGCCAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp TGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGGCTTaGCACTTTGAAAGGGCCTTCAAGCCCTCTCTTTGTCCAAGATGC +
Preference number: 1 (lower is better)
Translates to: WMYPWTPHNPCIQLA*HFERAFKPSLCPRC
Trigger: GCATCTTGGACAAAGAGAGGGCTTGAAGGCCCTTTCAAAGTGTCAAGCCAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp GCCAATTGCACCTTCCTCAAGTACATCCACGAGAACTGGCTGGACTaGCAGGGACTCCTCCCGTCTGCTGGATTCACCATTCTGGTTATA +
Preference number: 1 (lower is better)
Translates to: ANCTFLKYIHENWLD*QGLLPSAGFTILVI
Trigger: TATAACCAGAATGGTGAATCCAGCAGACGGGAGGAGTCCCTGGCAGTCCAGCCAGTTCTCGTGGATGTACTTGAGGAAGGTGCAATTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp AGCACCCCGAATACTCATGGCCTGCATGAGAACACCCACATGCTGTaGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTA +
Preference number: 1 (lower is better)
Translates to: STPNTHGLHENTHML*VSKPPDLVWTAMVL
Trigger: TAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGCATGTGGGTGTTCTCATGCAGGCCATGAGTATTCGGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp AGGTCAGAGTGTCCACCCTGTGACCAGGCTACTGATGTAATGAGTTaGGTGAGATCAACTGGCCAGGAGCACAGTCCAACGAAGTCTCAC +
Preference number: 1 (lower is better)
Translates to: RSECPPCDQATDVMS*VRSTGQEHSPTKSH
Trigger: GTGAGACTTCGTTGGACTGTGCTCCTGGCCAGTTGATCTCACCCAACTCATTACATCAGTAGCCTGGTCACAGGGTGGACACTCTGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTaGCTTGACACTTTGAAAGGGCCTTCAAGCCCTCTCTTTGTCCAA +
Preference number: 1 (lower is better)
Translates to: ASGCTPGLHTTRASN*LDTLKGPSSPLFVQ
Trigger: TTGGACAAAGAGAGGGCTTGAAGGCCCTTTCAAAGTGTCAAGCCAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp GGCTTGACACATGGTTGGACTACAGGCGACCAGATCAGTTCCAGCTaGTATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTA +
Preference number: 1 (lower is better)
Translates to: GLTHGWTTGDQISSS*YAQEATSQGHSPRV
Trigger: TACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTGATCTGGTCGCCTGTAGTCCAACCATGTGTCAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp TCTCTCACGCTCACTCTCTACTTCCTCATTTTTCAGCTTCAGTGCTaGGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACT +
Preference number: 1 (lower is better)
Translates to: SLTLTLYFLIFQLQC*ASRSQVFFQDASST
Trigger: AGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAATGAGGAAGTAGAGAGTGAGCGTGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 90 bp GGAAACAAGAACATTGCCCAGCCTCTGACGACTCTTGTCCCCTCCTaGTTTCAGGCCTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGA +
Preference number: 1 (lower is better)
Translates to: GNKNIAQPLTTLVPS*FQAFPASTSFYQSR
Trigger: TCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAGGCCTGAAAGCAGGAGGGGACAAGAGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp TACACCACCAGCTTCTCCTCCTTTAACGGGTACATTCAGTTTTTCTaGCTTCAGGGTGCTGGCAGTCCCATGTGGGAAGCAGAGCAGCAA +
Preference number: 1 (lower is better)
Translates to: YTTSFSSFNGYIQFF*LQGAGSPMWEAEQQ
Trigger: TTGCTGCTCTGCTTCCCACATGGGACTGCCAGCACCCTGAAGGCAGAAAAACTGAATGTACCCGTTAAAGGAGGAGAAGCTGGTGGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp TGGCTGACGTTTCTGCCGTCTGCTCAGAGGTCTAACCTGAATGAATaGATAACACCTGCCATTGCTTCTGGATGTACCCCTGGACTCCAC +
Preference number: 1 (lower is better)
Translates to: WLTFLPSAQRSNLNE*ITPAIASGCTPGLH
Trigger: GTGGAGTCCAGGGGTACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGCAGACGGCAGAAACGTCAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp GACACATGGTTGGACTACAGGCGACCAGATCAGTTCCAGCTGATATaGCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTAGAAGA +
Preference number: 1 (lower is better)
Translates to: DTWLDYRRPDQFQLI*PGSDISRTFTQSRR
Trigger: TCTTCTACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTGATCTGGTCGCCTGTAGTCCAACCATGTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp TTCCTCTTCTTCAGGTCCAGAGACAGCAATTCCAAAGCAGCCTTCTaGATTTCCCGTTGCTTCTCCAGTTCCTGGATTTGTCCCCGCAGA +
Preference number: 1 (lower is better)
Translates to: FLFFRSRDSNSKAAF*ISRCFSSSWICPRR
Trigger: TCTGCGGGGACAAATCCAGGAACTGGAGAAGCAACGGGAAATGCAGAAGGCTGCTTTGGAATTGCTGTCTCTGGACCTGAAGAAGAGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR CCA 90 bp CAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTaGAAGATCATCCACAAGCTCGAGTGTGAGGGCAAGAGCACAGTC +
Preference number: 1 (lower is better)
Translates to: QSCYWARKVYFRKPE*KIIHKLECEGKSTV
Trigger: GACTGTGCTCTTGCCCTCACACTCGAGCTTGTGGATGATCTTCCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp AAGATGCTCTGTTTGACTCTCCCTGGCCTCACTGAGAGCAGCCAGTaGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTG +
Preference number: 1 (lower is better)
Translates to: KMLCLTLPGLTESSQ*VSSAQLGHSANFHL
Trigger: CAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCACTGGCTGCTCTCAGTGAGGCCAGGGAGAGTCAAACAGAGCATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp CTCTTGCTTTTCTCTCCCTGCCTCCAGCTTGACAACCCTACACTGTaGATAGGCAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGG +
Preference number: 1 (lower is better)
Translates to: LLLFSPCLQLDNPTL*IGSSSLRYTTCQLW
Trigger: CCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTGCCTATTCACAGTGTAGGGTTGTCAAGCTGGAGGCAGGGAGAGAAAAGCAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR GCA 90 bp AGCAGTTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTaGTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGAAG +
Preference number: 1 (lower is better)
Translates to: SSCHHYWWDTPQRQS*YWARKVYFRKPEWK
Trigger: CTTCCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAACTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp CAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTCTGTGTaGCTAGAGGTGAGCTCCTTCTCAGAGATCCCTGTGGAGCTTTGT +
Preference number: 1 (lower is better)
Translates to: QLGHSANFHLCPGSV*LEVSSFSEIPVELC
Trigger: ACAAAGCTCCACAGGGATCTCTGAGAAGGAGCTCACCTCTAGGCACACAGAACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp GCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTaGCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCT +
Preference number: 1 (lower is better)
Translates to: APLSDIQHASFGTGW*PFSFLSPSPLIAKP
Trigger: AGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR CCA 90 bp TTTGGGTCTGGAGCTGATGAAAACAGCAGTTGTCACCATTATTGGTaGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGGAAAGTG +
Preference number: 1 (lower is better)
Translates to: FGSGADENSSCHHYW*DTPQRQSCYWARKV
Trigger: CACTTTCCTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAACTGCTGTTTTCATCAGCTCCAGACCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp CTCTTTGGGTCTGGAGCTGATGAAAACAGCAGTTGTCACCATTATTaGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGGAAA +
Preference number: 1 (lower is better)
Translates to: LFGSGADENSSCHHY*WDTPQRQSCYWARK
Trigger: TTTCCTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAACTGCTGTTTTCATCAGCTCCAGACCCAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GCAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTaGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAG +
Preference number: 1 (lower is better)
Translates to: AAPLSDIQHASFGTG*CPFSFLSPSPLIAK
Trigger: CTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR TCA 90 bp CAGGAAGCGACATCTCAAGGACATTCACCCAGAGTAGAAGAGGAATaGGGCCATGTGGAGCTTCTGAACTCAGAGACTCTGACTTTAGCT +
Preference number: 1 (lower is better)
Translates to: QEATSQGHSPRVEEE*GHVELLNSETLTLA
Trigger: AGCTAAAGTCAGAGTCTCTGAGTTCAGAAGCTCCACATGGCCTCATTCCTCTTCTACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp TGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTaGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGAAGATCATC +
Preference number: 1 (lower is better)
Translates to: CHHYWWDTPQRQSCY*ARKVYFRKPEWKII
Trigger: GATGATCTTCCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp CTAGAATGTGAGACTACTCCTGGCCAGCAATCTGACCTGCAGGGCTaGAATGTTCATAGATACGGGAGAGGTTTTGATAGGAAACCAAGA +
Preference number: 1 (lower is better)
Translates to: LECETTPGQQSDLQG*NVHRYGRGFDRKPR
Trigger: TCTTGGTTTCCTATCAAAACCTCTCCCGTATCTATGAACATTCCAGCCCTGCAGGTCAGATTGCTGGCCAGGAGTAGTCTCACATTCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp GAGATCCCTGTGGAGCTTTGTTTAAATGAGTATTTGCCAAATGACTaGATAGCTGGGGCAGGAGCAGCAGCTAGCCAATCTCATTCACCA +
Preference number: 1 (lower is better)
Translates to: EIPVELCLNEYLPND*IAGAGAAASQSHSP
Trigger: TGGTGAATGAGATTGGCTAGCTGCTGCTCCTGCCCCAGCTATTCAGTCATTTGGCAAATACTCATTTAAACAAAGCTCCACAGGGATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GAAGAGCAAATACAGATTAGTCTAGTCCTGAATAAAGACCCTGCTTaGCAGCCTCTAAGATGTCTTTCAGCTGCTGGAACCTCTCTGAGG +
Preference number: 1 (lower is better)
Translates to: EEQIQISLVLNKDPA*QPLRCLSAAGTSLR
Trigger: CCTCAGAGAGGTTCCAGCAGCTGAAAGACATCTTAGAGGCTGCCAAGCAGGGTCTTTATTCAGGACTAGACTAATCTGTATTTGCTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp CAATCTCATTCACCAGGTAATGGAGTCAGGCAGACAAACTTCAGATaGCCCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCAT +
Preference number: 1 (lower is better)
Translates to: QSHSPGNGVRQTNFR*PLYREESYSQRLQH
Trigger: ATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGGGCCATCTGAAGTTTGTCTGCCTGACTCCATTACCTGGTGAATGAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp ACACAACCTAACAAAATGCAAATATCCCACATAAACCGACATCCCTaGCACATTGTGGTGCACCAGGTGTCTAGGAATGAGGTAGCTCAG +
Preference number: 1 (lower is better)
Translates to: TQPNKMQISHINRHP*HIVVHQVSRNEVAQ
Trigger: CTGAGCTACCTCATTCCTAGACACCTGGTGCACCACAATGTGTCAGGGATGTCGGTTTATGTGGGATATTTGCATTTTGTTAGGTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp GTTTCTGGGGTTTCAGAAGTTTTCACTAAGCATCTGTTGCTGAGCTaGATGTGTAGGTTTCTGGAACAAAGCTCTAGTCGCTGTGAACAG +
Preference number: 1 (lower is better)
Translates to: VSGVSEVFTKHLLLS*MCRFLEQSSSRCEQ
Trigger: CTGTTCACAGCGACTAGAGCTTTGTTCCAGAAACCTACACATGCAGCTCAGCAACAGATGCTTAGTGAAAACTTCTGAAACCCCAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp TTCATAGATACGGGAGAGGTTTTGATAGGAAACCAAGACAGGAGGTaGAAGGGCAATGTGTGGATTATTAATCTGGCCTTCCCTGATTCC +
Preference number: 1 (lower is better)
Translates to: FIDTGEVLIGNQDRR*KGNVWIINLAFPDS
Trigger: GGAATCAGGGAAGGCCAGATTAATAATCCACACATTGCCCTTGCACCTCCTGTCTTGGTTTCCTATCAAAACCTCTCCCGTATCTATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GAAACCAAGACAGGAGGTGCAAGGGCAATGTGTGGATTATTAATCTaGCCTTCCCTGATTCCCTCACCTGAACAACTGGTAGTAATTAAG +
Preference number: 1 (lower is better)
Translates to: ETKTGGARAMCGLLI*PSLIPSPEQLVVIK
Trigger: CTTAATTACTACCAGTTGTTCAGGTGAGGGAATCAGGGAAGGCCAGATTAATAATCCACACATTGCCCTTGCACCTCCTGTCTTGGTTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp AGGGGCTTTGTCTTGTGTGTTCTCTGTAACCCTTCCCTATCACAGTaGATGGTGTACAATAAATGCATGCTACCTCAACAGGAATCTTTG +
Preference number: 1 (lower is better)
Translates to: RGFVLCVLCNPSLSQ*MVYNKCMLPQQESL
Trigger: CAAAGATTCCTGTTGAGGTAGCATGCATTTATTGTACACCATGCACTGTGATAGGGAAGGGTTACAGAGAACACACAAGACAAAGCCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 90 bp TACAGTTCTTCTAGTCAGTACACAGAATTGCCTCTGACTCATAAATaGGTGTTAGCCTGTTCTCATCAACTGGACTGTAGGCTGTCTGTG +
Preference number: 1 (lower is better)
Translates to: YSSSSQYTELPLTHK*VLACSHQLDCRLSV
Trigger: CACAGACAGCCTACAGTCCAGTTGATGAGAACAGGCTAACACTCATTTATGAGTCAGAGGCAATTCTGTGTACTGACTAGAAGAACTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp GTTCTCTGTAACCCTTCCCTATCACAGTGCATGGTGTACAATAAATaGATGCTACCTCAACAGGAATCTTTGGCAAGTTCTTCCCAGATA +
Preference number: 1 (lower is better)
Translates to: VLCNPSLSQCMVYNK*MLPQQESLASSSQI
Trigger: TATCTGGGAAGAACTTGCCAAAGATTCCTGTTGAGGTAGCATGCATTTATTGTACACCATGCACTGTGATAGGGAAGGGTTACAGAGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 90 bp GCTTTGTCTTGTGTGTTCTCTGTAACCCTTCCCTATCACAGTGCATaGTGTACAATAAATGCATGCTACCTCAACAGGAATCTTTGGCAA +
Preference number: 1 (lower is better)
Translates to: ALSCVFSVTLPYHSA*CTINACYLNRNLWQ
Trigger: TTGCCAAAGATTCCTGTTGAGGTAGCATGCATTTATTGTACACCATGCACTGTGATAGGGAAGGGTTACAGAGAACACACAAGACAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 90 bp AATGAGTTTCCAGTTACTGTGTATCTAAAACAAATATCCACCGCATaGTACCCCCTTGGCTGCTCAACTACCACACACAACCTAACAAAA +
Preference number: 1 (lower is better)
Translates to: NEFPVTVYLKQISTA*YPLGCSTTTHNLTK
Trigger: TTTTGTTAGGTTGTGTGTGGTAGTTGAGCAGCCAAGGGGGTAGCATGCGGTGGATATTTGTTTTAGATACACAGTAACTGGAAACTCATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGAGCAGCACCACTCTGTaGGCCCCAGTGCCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQSSTTL*APVPSY
Trigger: ATAGGAAGGCACTGGGGCTCACAGAGTGGTGCTGCT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp CTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCTTTCAGCTTCAGTGCTaGGCGAGCCGTTCTCAGGTC +
Preference number: 2 (lower is better)
Translates to: LPLGHLQFALLLQSLGSLFQLQC*ASRSQV
Trigger: GACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAA...GAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATACTCCCTTGATGTGGTaGTGCCACCCAGCTGCACAA +
Preference number: 2 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYTPLMW*CHPAAQ
Trigger: TTGTGCAGCTGGGTGGCAGCACCACATCAAGGGAGT...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCCACAAGCTCGAGTGTaGGGGCAAGAGCACAGTCTA +
Preference number: 2 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTPQARV*GQEHSL
Trigger: TAGACTGTGCTCTTGCCCTCACACTCGAGCTTGTGG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp CAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTGGGAGTTCGCCCTGCTCTTaGAGAGCCTGGGCTCTCTCA +
Preference number: 2 (lower is better)
Translates to: QLGSGSGGPNSLAEPSLGSSPCS*RAWALS
Trigger: TGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACT...CCCAAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR CCA 90 bp CTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTCCTCCTCTAACTaGAGAAGCTGCTGGTTCAGC +
Preference number: 2 (lower is better)
Translates to: LPPPGRPAKHFSPALRPPFSSSN*RSCWFS
Trigger: GCTGAACCAGCAGCTTCTCCAGTTAGAGGAGGAGAA...TGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
3UTR CAA 90 bp ATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCCCAGGGTaGCAGATTTACTTCCTCTTCCTGGGAACACCCGCCGACCTGGGG +
Preference number: 2 (lower is better)
Translates to: MQFASFPGELGSSPG*QIYFLFLGTPADLG
Trigger: CCCCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp CTCTTGCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTaGCAGAGCCTGGGCTCTCTCACGCTCACTCTCTACTTCCTCATT +
Preference number: 2 (lower is better)
Translates to: LLQSLPLGHLQFALL*QSLGSLTLTLYFLI
Trigger: AATGAGGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGGCCCTGAAGCCCCGATaGAACTGGAGACCACGCCAT +
Preference number: 2 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLALKPR*NWRPRH
Trigger: ATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGC...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGGAACACCCGCCGACCTaGGGCTCCTGGGTGCCTAAC +
Preference number: 2 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWEHPPT*GSWVPN
Trigger: GTTAGGCACCCAGGAGCCCCAGGTCGGCGGGTGTTC...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTCCTGCATGTTCTGGTaGCCAATTGCACCTTCCTCA +
Preference number: 2 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYSCMFW*PIAPSS
Trigger: TGAGGAAGGTGCAATTGGCCACCAGAACATGCAGGA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp CAGGGTGCTGGCAGTCCCATGTGGGAAGCAGAGCAGCAAAGGTCCTaGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGT +
Preference number: 2 (lower is better)
Translates to: QGAGSPMWEAEQQRS*GWEVMVTALTHKAR
Trigger: ACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCTTTGCTGCTCTGCTTCCCACATGGGACTGCCAGCACCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCAGGGGCCATGACCCATaGCACAGTCTTCTGTCTGTG +
Preference number: 2 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGRGHDP*HSLLSV
Trigger: CACAGACAGAAGACTGTGTCATGGGTCATGGCCCCT...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACGGTCCTCCCCAGGGTTaGAGATTTACTTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNGPPQG*RFTSSS
Trigger: GGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACC...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp GGATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGGGGGCTTCTACGACAGCTaGTTGCAGGTGTTCCACCTG +
Preference number: 2 (lower is better)
Translates to: GFVPAESPPPLLFQLGSGGFYDS*LQVFHL
Trigger: CAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCC...CCCAGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAATCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR GCA 90 bp CCTGGATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGATGCCAGCAGCACTTaGCTGAGCCCTGGCTTCTAC +
Preference number: 2 (lower is better)
Translates to: PGFVPAESPPPLLFQLGSDASST*LSPGFY
Trigger: GTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATC...AGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAATCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR CCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCACTGCACTCCAGCTTaGAAGACAGGACAAAACCCT +
Preference number: 2 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTHCTPA*KTGQNP
Trigger: AGGGTTTTGTCCTGTCTTCCAAGCTGGAGTGCAGTG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTGTCACCATTATTGGTaGGACACTCCACAGAGGCAA +
Preference number: 2 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYCHHYW*DTPQRQ
Trigger: TTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGAAGCCCCGATGCAACTaGAGACCACGCCATCTCCAG +
Preference number: 2 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLKPRCN*RPRHLQ
Trigger: CTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTT...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp TGCTGGCAGTCCCATGTGGGAAGCAGAGCAGCAAAGGTCCTTGGGTaGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAT +
Preference number: 2 (lower is better)
Translates to: CWQSHVGSRAAKVLG*GGDGHCSNTQSTWD
Trigger: ATCCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCTTTGCTGCTCTGCTTCCCACATGGGACTGCCAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp CCCTTCCTCCGCTGGGCCTCCAGTTGCAATGGCTCCAGCCTTTCCTaGGTACTGGAACCAGGGGTGAGTGATAAACAGTCTGTGTTCTTC +
Preference number: 2 (lower is better)
Translates to: PFLRWASSCNGSSLS*VLEPGVSDKQSVFF
Trigger: GAAGAACACAGACTGTTTATCACTCACCCCTGGTTCCAGTACCAAGGAAAGGCTGGAGCCATTGCAACTGGAGGCCCAGCGGAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTGCCTCATTCCCAGGTaGGTTGGGGTCCTCCCCAGG +
Preference number: 2 (lower is better)
Translates to: FILISITLDCQAFPWQLDCLIPR*VGVLPR
Trigger: CCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTGACAGCAGCAGAAAATaGATGCAAAGATCCCAGGGT +
Preference number: 2 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTDSSRK*MQRSQG
Trigger: ACCCTGGGATCTTTGCATTCATTTTCTGCTGCTGTC...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp ATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGGGTCTCTACGACAGCTGCTTaGAGGTGTTCCACCTGGGCT +
Preference number: 2 (lower is better)
Translates to: ICPRRVSTSSSLSARVWVSTTAA*RCSTWA
Trigger: AGCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGA...GACCCAGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCATTCCCAGGTGAGTTaGGGTCCTCCCCAGGGTTGC +
Preference number: 2 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTHSQVS*GPPQGC
Trigger: GCAACCCTGGGGAGGACCCCAACTCACCTGGGAATG...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTTTAGAAAGCCGGAGTaGAAGATCATCCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQFRKPE*KIIHKL
Trigger: GAGCTTGTGGATGATCTTCCACTCCGGCTTTCTAAA...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTACATCCACGAGAACTaGCTGGACTGCCAGGGACTC +
Preference number: 2 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLYIHEN*LDCQGL
Trigger: GAGTCCCTGGCAGTCCAGCCAGTTCTCGTGGATGTA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTAGGCGGTATGACCAGTaGGGGCCCCAGACCTGGCGC +
Preference number: 2 (lower is better)
Translates to: AQRSNLNEWITPAIASGCRRYDQ*GPQTWR
Trigger: GCGCCAGGTCTGGGGCCCCCACTGGTCATACCGCCT...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCATCTCCAGAGGCCGGTaGATGCTCGGTCCTGGGCTC +
Preference number: 2 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGISRGR*MLGPGL
Trigger: GAGCCCAGGACCGAGCATCCACCGGCCTCTGGAGAT...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTGTGCGGAGGGGCCATaGCCCATGACACAGTCTTCT +
Preference number: 2 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFCAEGP*PMTQSS
Trigger: AGAAGACTGTGTCATGGGTCATGGCCCCTCCGCACA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp GCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCACTGAGCTTGACAGCTaGAGCCCGAAGATCAGCTAC +
Preference number: 2 (lower is better)
Translates to: ASILLHTDWFSSSNWRSCTELDS*SPKISY
Trigger: GTAGCTGATCTTCGGGCTGCAGCTGTCAAGCTCAGT...GCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
3UTR-3UTR CCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCACCGACCTGGGGCTCCTaGGTGCCTAACAGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPPTWGS*VPNRAR
Trigger: CCTGGCTCTGTTAGGCACCCAGGAGCCCCAGGTCGG...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATACGCTCTGCAGAGTACTaGGTCAGAAGGCAGGAGGTG +
Preference number: 2 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIRSAEY*VRRQEV
Trigger: CACCTCCTGCCTTCTGACCCAGTACTCTGCAGAGCG...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTAACTCTCGCTCACCCTaGGCTTCCATTCGCTGTAGC +
Preference number: 2 (lower is better)
Translates to: FQLGSGSGGPNSLAEPSLNSRSP*ASIRCS
Trigger: GCTACAGCGAATGGAAGCCCAGGGTGAGCGAGAGTT...AAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR TCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATAGGCACCCCTCTGGGTaGTTCCATAGGGAGCAAGCA +
Preference number: 2 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHRHPSG*FHREQA
Trigger: TGCTTGCTCCCTATGGAATCACCCAGAGGGGTGCCT...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCTCAACGCTGTGTTTTTaGGGCCCCAGAACTTCTTTT +
Preference number: 2 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPSTLCF*GPRTSF
Trigger: AAAAGAAGTTCTGGGGCCTCAAAAACACAGCGTTGA...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGCTTTGGTGTCAACATTaGTCTTGCCCTCCCTGTGCA +
Preference number: 2 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLLWCQH*SCPPCA
Trigger: TGCACAGGGAGGGCAAGATCAATGTTGACACCAAAG...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp GTTCCTCTTCTTCAGGTCCAGAGACAGCAATTCCAAAGCAGCCTTCTGCATTTCCCAGCAGCACTTGCCTaGGCCCTGGCTTCTACGACA +
Preference number: 2 (lower is better)
Translates to: VPLLQVQRQQFQSSLLHFPAALA*ALASTT
Trigger: TGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGG...GAAATGCAGAAGGCTGCTTTGGAATTGCTGTCTCTGGACCTGAAGAAGAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATAACTCTTGTCCCCTCCTaGTTTCAGGCCTTTCCAGCC +
Preference number: 2 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYITLVPS*FQAFPA
Trigger: GGCTGGAAAGGCCTGAAAGCAGGAGGGGACAAGAGT...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGCGAATACTCATGGCCTaGATGAGAACACCCACATGC +
Preference number: 2 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLRILMA*MRTPTC
Trigger: GCATGTGGGTGTTCTCATGCAGGCCATGAGTATTCG...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCGCTGGGCCTCCAGTTaGAATGGCTCCAGCCTTTCC +
Preference number: 2 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGRWASS*NGSSLS
Trigger: GGAAAGGCTGGAGCCATTGCAACTGGAGGCCCAGCG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp TCCATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTaGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGGA +
Preference number: 2 (lower is better)
Translates to: SIGSKQMQFASFPGE*GSSPGLQIYFLFLG
Trigger: TCCCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp ACCCCTGGACTCCACACAACCCGTGCATCCAACTGGCTTGACACTTaGAAAGGGCCTTCAAGCCCTCTCTTTGTCCAAGATGCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: TPGLHTTRASNWLDT*KGPSSPLFVQDALF
Trigger: AAACAGAGCATCTTGGACAAAGAGAGGGCTTGAAGGCCCTTTCAAAGTGTCAAGCCAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGGGCAGGAGAATTGCTTaGACCCAGGAGGTGGATGTT +
Preference number: 2 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKGRRIA*TQEVDV
Trigger: AACATCCACCTCCTGGGTTCAAGCAATTCTCCTGCC...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGGATAATCTCTGTGGCTaGGCTCTAACCTCTACTCCT +
Preference number: 2 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLDNLCG*ALTSTP
Trigger: AGGAGTAGAGGTTAGAGCTCAGCCACAGAGATTATC...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TCATTTTTCAGCTTCAGTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGTTCTCCTTGGCTGCCTaGAGTAACTCTCGCTCACCC +
Preference number: 2 (lower is better)
Translates to: SFFSFSAERAVLRSSSRMFSLAA*SNSRSP
Trigger: GGGTGAGCGAGAGTTACTTCAGGCAGCCAAGGAGAA...CATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR GCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCTGGGTGAGTGGGTGCTaGTCTTACCCCTCCCAGATT +
Preference number: 2 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGWVSGC*SYPSQI
Trigger: AATCTGGGAGGGGTAAGAGCAGCACCCACTCACCCA...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCCCCTATCACAGTGCATaGTGTACAATAAATGCATGC +
Preference number: 2 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPPYHSA*CTINAC
Trigger: GCATGCATTTATTGTACACCATGCACTGTGATAGGG...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATACAAAGGTCCTTGGGTTaGGAGGTGATGGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIQRSLG*EVMVTA
Trigger: AGCAGTGACCATCACCTCCCAACCCAAGGACCTTTG...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TCTCTTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCTGTCAGGTTCTCCTTaGCTGCCTGAAGTAACTCTC +
Preference number: 2 (lower is better)
Translates to: SLSARVWVRRAKFSCRAFLSGSP*LPEVTL
Trigger: GAGAGTTACTTCAGGCAGCCAAGGAGAACCTGACAG...GAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATACTCTGTGAGCCCCAGTaGCTTCCTATCTCTGTAGAA +
Preference number: 2 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYILCEPQ*LPISVE
Trigger: TTCTACAGAGATAGGAAGGCACTGGGGCTCACAGAG...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTCCCATTCCCCCGCTCTaGAGAGTACTGGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: AQRSNLNEWITPAIASGCPIPPL*RVLGQK
Trigger: CTTCTGACCCAGTACTCTGCAGAGCGGGGGAATGGG...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATCATCCTCCCTTGCCTaGTTCTTAAGTGTGGTGAGC +
Preference number: 2 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISSSLA*FLSVVS
Trigger: GCTCACCACACTTAAGAAGCAGGCAAGGGAGGATGA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp TCTCATCAACTGGACTGTAGGCTGTCTGTGGACAGGGGCTTTGTCTaGTGTGTTCTCTGTAACCCTTCCCTATCACAGTGCATGGTGTAC +
Preference number: 2 (lower is better)
Translates to: SHQLDCRLSVDRGFV*CVLCNPSLSQCMVY
Trigger: GTACACCATGCACTGTGATAGGGAAGGGTTACAGAGAACACACAAGACAAAGCCCCTGTCCACAGACAGCCTACAGTCCAGTTGATGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTATACCCTGCCACATGTaGCAAGGTCAGGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGIPCHM*QGQERR
Trigger: CCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTAT...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCGCATCTACAAAGCCTaGCTTCACCAGCATGGTGTG +
Preference number: 2 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGRIYKA*LHQHGV
Trigger: CACACCATGCTGGTGAAGGCAGGCTTTGTAGATGCG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCCCTTCATCCTCCCTTaGCTGCTTCTTAAGTGTGGT +
Preference number: 2 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGPFILP*LLLKCG
Trigger: ACCACACTTAAGAAGCAGGCAAGGGAGGATGAAGGG...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTTTACTTCCTCTTCCTaGGAACACCCGCCGACCTGG +
Preference number: 2 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIFTSSS*EHPPTW
Trigger: CCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAA...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCCCCTCCCAGATTCTTaGCTAGGTCTCAGTTCCATC +
Preference number: 2 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGPLPDS*LGLSSI
Trigger: GATGGAACTGAGACCTAGCCAAGAATCTGGGAGGGG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTATGTCTTTCAGCTGCTaGAACCTCTCTGAGGCCCAG +
Preference number: 2 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGMSFSC*NLSEAQ
Trigger: CTGGGCCTCAGAGAGGTTCCAGCAGCTGAAAGACAT...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp ACTGTGAATAGGCAGCTCCTCTCTCAGATATACAACATGCCAGCTTaGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCT +
Preference number: 2 (lower is better)
Translates to: TVNRQLLSQIYNMPA*AQGGAPFHSYLHHP
Trigger: AGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTGCCTATTCACAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR-3UTR TCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAGGCTGCAGTAAGATGTaGTTGTGCCACTGCACTCCA +
Preference number: 2 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKGCSKM*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCACATCTTACTGCAGCC...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCTGTGGTGAGCAGAGTTaGGCTTGCACTCCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTCGEQS*ACTPPQ
Trigger: CTGAGGAGGAGTGCAAGCTCAACTCTGCTCACCACA...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGAGGAAGGTAATGGCCTaGTTCTTTAAGGAAAACTGT +
Preference number: 2 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLRKVMA*FFKENC
Trigger: ACAGTTTTCCTTAAAGAAGCAGGCCATTACCTTCCT...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATCTAACCTCTACTCCTaGATGTTCTGGTGGCCAATT +
Preference number: 2 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISNLYS*MFWWPI
Trigger: AATTGGCCACCAGAACATGCAGGAGTAGAGGTTAGA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTTGGGGCCTAAGGCCCTaGCTCATGACCTACAGAAAA +
Preference number: 2 (lower is better)
Translates to: AQRSNLNEWITPAIASGCWGLRP*LMTYRK
Trigger: TTTTCTGTAGGTCATGAGCCAGGGCCTTAGGCCCCA...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTGTGCCCAGAATCATGTaGAGGGCTCTCTTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: AQRSNLNEWITPAIASGCVPRIM*RALLVW
Trigger: CCAAACCAAGAGAGCCCTCCACATGATTCTGGGCAC...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp AATCTGACCTGCAGGGCTGGAATGTTCATAGATACGGGAGAGGTTTaGATAGGAAACCAAGACAGGAGGTGCAAGGGCAATGTGTGGATT +
Preference number: 2 (lower is better)
Translates to: NLTCRAGMFIDTGEV*IGNQDRRCKGNVWI
Trigger: AATCCACACATTGCCCTTGCACCTCCTGTCTTGGTTTCCTATCAAAACCTCTCCCGTATCTATGAACATTCCAGCCCTGCAGGTCAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAACTAGGACCAGTCCATaGGTGAGAAGTTCCGCCATA +
Preference number: 2 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKTRTSP*VRSSAI
Trigger: TATGGCGGAACTTCTCACCCATGGACTGGTCCTAGT...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR GCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCCAGTTCCAGCTGATATaGCCAGGAAGCGACATCTCA +
Preference number: 2 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTQFQLI*PGSDIS
Trigger: TGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAGTCCATCCTTCTGATTaGCTTGACACATGGTTGGAC +
Preference number: 2 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKVHPSD*LDTWLD
Trigger: GTCCAACCATGTGTCAAGCCAATCAGAAGGATGGAC...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTAGGCAATCCTGCTACTaGGCAAGGAAAGTGTACTTT +
Preference number: 2 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGRQSCY*ARKVYF
Trigger: AAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCT...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp CAGTGCATGGTGTACAATAAATGCATGCTACCTCAACAGGAATCTTaGGCAAGTTCTTCCCAGATAAACTCCCTTGATGTGGTGCTGCCA +
Preference number: 2 (lower is better)
Translates to: QCMVYNKCMLPQQES*ASSSQINSLDVVLP
Trigger: TGGCAGCACCACATCAAGGGAGTTTATCTGGGAAGAACTTGCCAAAGATTCCTGTTGAGGTAGCATGCATTTATTGTACACCATGCACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 90 bp GATGACACATATTCCTTCCTTCACACTTCCCCACTTCAGGTCTCTTaGGGTCTGGAGCTGATGAAAACAGCAGTTGTCACCATTATTGGT +
Preference number: 2 (lower is better)
Translates to: DDTYSFLHTSPLQVS*GLELMKTAVVTIIG
Trigger: ACCAATAATGGTGACAACTGCTGTTTTCATCAGCTCCAGACCCAAAGAGACCTGAAGTGGGGAAGTGTGAAGGAAGGAATATGTGTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTAAAATTAGCCGGGCATaGTGGCACGTGTCTATAATC +
Preference number: 2 (lower is better)
Translates to: AQRSNLNEWITPAIASGCKISRA*WHVSII
Trigger: GATTATAGACACGTGCCACCATGCCCGGCTAATTTT...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR TCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAAAATAAATTCTAGATaGGAGGCAGTACATGTCCCT +
Preference number: 2 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGKINSR*EAVHVP
Trigger: AGGGACATGTACTGCCTCTCATCTAGAATTTATTTT...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCCCTCCAGACCTAGTGTaGACTGCAATGGTTTTATCA +
Preference number: 2 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTPPDLV*TAMVLS
Trigger: TGATAAAACCATTGCAGTCCACACTAGGTCTGGAGG...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp GGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTaGGAACACCCGCCGACCTGGGGCTCCTGGGTGCCT +
Preference number: 3 (lower is better)
Translates to: GPPQGCRFTSSS*EHPPTWGSWVP
Trigger: AGGCACCCAGGAGCCCCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp CAGCACTTCAGATGGGCCCTGAAGCCCCGATGCAACTaGAGACCACGCCATCTCCAGAGGCCGGTGGATGCT +
Preference number: 3 (lower is better)
Translates to: QHFRWALKPRCN*RPRHLQRPVDA
Trigger: AGCATCCACCGGCCTCTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp CCGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTaGCCAGCCTCTGACGACTCTTGTCCCCTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: PPDLSTPRKQEH*PASDDSCPLLL
Trigger: AAGCAGGAGGGGACAAGAGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp GCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTaGAGAGCCTGGGCTCTCTCACGCTCACTCTCTACT +
Preference number: 3 (lower is better)
Translates to: AFPWATFSSPCS*RAWALSRSLST
Trigger: AGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR TCA 72 bp GGCAAACCTGTAGGTGTGCGGAGGGGCCATGACCCATaGCACAGTCTTCTGTCTGTGTGCTCCTGGCTGTGG +
Preference number: 3 (lower is better)
Translates to: GKPVGVRRGHDP*HSLLSVCSWLW
Trigger: CCACAGCCAGGAGCACACAGACAGAAGACTGTGTCATGGGTCATGGCCCCTCCGCACACCTACAGGTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp CCCAGATACACAGGAGGCCGAGGCAGGAGAATTGCTTaGACCCAGGAGGTGGATGTTGCCACTGGTGAGCCG +
Preference number: 3 (lower is better)
Translates to: PRYTGGRGRRIA*TQEVDVATGEP
Trigger: CGGCTCACCAGTGGCAACATCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCGGCCTCCTGTGTATCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp GGTCACTGCTCTAACACACAAAGCACGTGGGATCCTTaGGAGAACAGGGGCAGCACCCGCCGGACCTCAGCA +
Preference number: 3 (lower is better)
Translates to: GHCSNTQSTWDP*ENRGSTRRTSA
Trigger: TGCTGAGGTCCGGCGGGTGCTGCCCCTGTTCTCTCAAGGATCCCACGTGCTTTGTGTGTTAGAGCAGTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp TTTGATCAGCACTTCAGATGGGCCCTGAAGCCCCGATaGAACTGGAGACCACGCCATCTCCAGAGGCCGGTG +
Preference number: 3 (lower is better)
Translates to: FDQHFRWALKPR*NWRPRHLQRPV
Trigger: CACCGGCCTCTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp CTGCCACTGGCCCCAGAGCTGCAGAGGTTCTGTGGCTaGTCAATTCAGCCCCGCATCTACAAAGCCTGCCTT +
Preference number: 3 (lower is better)
Translates to: LPLAPELQRFCG*SIQPRIYKACL
Trigger: AAGGCAGGCTTTGTAGATGCGGGGCTGAATTGAGCAGCCACAGAACCTCTGCAGCTCTGGGGCCAGTGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp AGCAGCACTTGCCTGAGCCCTGGCTTCTACGACAGCTaGTTGCAGGTGTTCCACCTGGGCTGTCAGGTTCTC +
Preference number: 3 (lower is better)
Translates to: SSTCLSPGFYDS*LQVFHLGCQVL
Trigger: GAGAACCTGACAGCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 72 bp CGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTaGGGCCTCCATTCTGCTGCACACAGACTGGTTCTC +
Preference number: 3 (lower is better)
Translates to: RQVDLQSISRLL*GLHSAAHRLVL
Trigger: GAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
3UTR CCA 72 bp GTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTaGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCC +
Preference number: 3 (lower is better)
Translates to: VRRAKFSCRAFP*ATFSSPCSCRA
Trigger: GGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR TCA 72 bp TGTCTGCCTGGTTTGATCAGCACTTCAGATGGGCCCTaGAGCCCCGATGCAACTGGAGACCACGCCATCTCC +
Preference number: 3 (lower is better)
Translates to: CLPGLISTSDGP*SPDATGDHAIS
Trigger: GGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATCAAACCAGGCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp TGTTCCACCTGGGCTGTCAGGTTCTCCTTGGCTGCCTaGAGTAACTCTCGCTCACCCTGGGCTTCCATTCGC +
Preference number: 3 (lower is better)
Translates to: CSTWAVRFSLAA*SNSRSPWASIR
Trigger: GCGAATGGAAGCCCAGGGTGAGCGAGAGTTACTTCAGGCAGCCAAGGAGAACCTGACAGCCCAGGTGGAACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 72 bp CGTTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACTTaGCTGAGCCCTGGCTTCTACGACAGCTGCTTGCAG +
Preference number: 3 (lower is better)
Translates to: RSQVFFQDASST*LSPGFYDSCLQ
Trigger: CTGCAAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR CCA 72 bp CCCTGCTTGGCAGCCTCTAAGATGTCTTTCAGCTGCTaGAACCTCTCTGAGGCCCAGAAGGTATGTGGGGCC +
Preference number: 3 (lower is better)
Translates to: PCLAASKMSFSC*NLSEAQKVCGA
Trigger: GGCCCCACATACCTTCTGGGCCTCAGAGAGGTTCCAGCAGCTGAAAGACATCTTAGAGGCTGCCAAGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp CTTCTTCCAGGATGCCAGCAGCACTTGCCTGAGCCCTaGCTTCTACGACAGCTGCTTGCAGGTGTTCCACCT +
Preference number: 3 (lower is better)
Translates to: LLPGCQQHLPEP*LLRQLLAGVPP
Trigger: AGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATCCTGGAAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 72 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTaGAATGGTTTTATCAGGCGGTATGACCAGTGGGGG +
Preference number: 3 (lower is better)
Translates to: AVGVEASRPSVD*NGFIRRYDQWG
Trigger: CCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp ATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTaGCAGTCCTGGGCCATGCGTATTTGGAATATAGGA +
Preference number: 3 (lower is better)
Translates to: IPRSQLDPELRL*QSWAMRIWNIG
Trigger: TCCTATATTCCAAATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp CGGTGTCTGAGTCAGCATGCCACTTGCCATGTGCTCTaGCCTGTGGGACAAGAATGTAGCCTTCAATGGGGG +
Preference number: 3 (lower is better)
Translates to: RCLSQHATCHVL*PVGQECSLQWG
Trigger: CCCCCATTGAAGGCTACATTCTTGTCCCACAGGGCAGAGCACATGGCAAGTGGCATGCTGACTCAGACACCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp CAGTTTTTCTGCCTTCAGGGTGCTGGCAGTCCCATGTaGGAAGCAGAGCAGCAAAGGTCCTTGGGTTGGGAG +
Preference number: 3 (lower is better)
Translates to: QFFCLQGAGSPM*EAEQQRSLGWE
Trigger: CTCCCAACCCAAGGACCTTTGCTGCTCTGCTTCCCACATGGGACTGCCAGCACCCTGAAGGCAGAAAAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TTTATCAGGCGGTATGACCAGTGGGGGCCCCAGACCTaGCGCAGACAGCCTTTGGCACTTTGGTGTCAACAT +
Preference number: 3 (lower is better)
Translates to: FIRRYDQWGPQT*RRQPLALWCQH
Trigger: ATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCCAGGTCTGGGGCCCCCACTGGTCATACCGCCTGATAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp AGCTTGCACTCCTCCTCAGCTGTGCCCAGAATCATGTaGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCT +
Preference number: 3 (lower is better)
Translates to: SLHSSSAVPRIM*RALLVWSTLAA
Trigger: AGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCACAGCTGAGGAGGAGTGCAAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTaGGCTCTCTCACGCTCACTCTCTACTTCCTCATTT +
Preference number: 3 (lower is better)
Translates to: WATFSSPCSCRA*ALSRSLSTSSF
Trigger: AAATGAGGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCCACTGCACTCCAGCTaGGAAGACAGGACAAAACCC +
Preference number: 3 (lower is better)
Translates to: RSLGWEVMVTALTHKARGPLHSS*EDRTKP
Trigger: GGGTTTTGTCCTGTCTTCCAAGCTGGAGTGCAGTGG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp TTCCTTTGGCAAACCTGTAGGTGTGCGGAGGGGCCATaGCCCATGACACAGTCTTCTGTCTGTGTGCTCCTG +
Preference number: 3 (lower is better)
Translates to: FLWQTCRCAEGP*PMTQSSVCVLL
Trigger: CAGGAGCACACAGACAGAAGACTGTGTCATGGGTCATGGCCCCTCCGCACACCTACAGGTTTGCCAAAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp ACATGTCCCTCAGCCAGGGCAAGGCACCCCTCTGGGTaGTTCCATAGGGAGCAAGCAAATGCAATTTGCCTC +
Preference number: 3 (lower is better)
Translates to: TCPSARARHPSG*FHREQANAICL
Trigger: GAGGCAAATTGCATTTGCTTGCTCCCTATGGAATCACCCAGAGGGGTGCCTTGCCCTGGCTGAGGGACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp GCTGGATTCACCATTCTGGTTATACCCTGCCACATGTaGCAAGGTCAGGAAAGGAGGCTCCGGCCTCATGCC +
Preference number: 3 (lower is better)
Translates to: AGFTILVIPCHM*QGQERRLRPHA
Trigger: GGCATGAGGCCGGAGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAATCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp ACCCCCTGCCACAGTCAGACCAGTCTTCTCACTGTGTaGTTGGCAACACCTCCAACCCCACTCCATCTTTCA +
Preference number: 3 (lower is better)
Translates to: TPCHSQTSLLTV*LATPPTPLHLS
Trigger: TGAAAGATGGAGTGGGGTTGGAGGTGTTGCCAAGCACACAGTGAGAAGACTGGTCTGACTGTGGCAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp AGACCCTGCTTGGCAGCCTCTAAGATGTCTTTCAGCTaGTGGAACCTCTCTGAGGCCCAGAAGGTATGTGGG +
Preference number: 3 (lower is better)
Translates to: RPCLAASKMSFS*WNLSEAQKVCG
Trigger: CCCACATACCTTCTGGGCCTCAGAGAGGTTCCAGCAGCTGAAAGACATCTTAGAGGCTGCCAAGCAGGGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp TCCCCTGCACTTAAAGCACCCCGAATACTCATGGCCTaGATGAGAACACCCACATGCTGTGGGTGTCGAAGC +
Preference number: 3 (lower is better)
Translates to: SPALKAPRILMA*MRTPTCCGCRS
Trigger: GCTTCGACACCCACAGCATGTGGGTGTTCTCATGCAGGCCATGAGTATTCGGGGTGCTTTAAGTGCAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp GCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTaGTGCACACAGACTGGTTCTCCTCCTCTAACTGGA +
Preference number: 3 (lower is better)
Translates to: AKHFSPALRPPF*CTQTGSPPLTG
Trigger: TCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
3UTR CCA 72 bp CCTCAGCTGTGCCCAGAATCATGTGGAGGGCTCTCTTaGTTTGGAGCACACTGGCAGCTCTTGCTTCTTCCT +
Preference number: 3 (lower is better)
Translates to: PQLCPESCGGLS*FGAHWQLLLLP
Trigger: AGGAAGAAGCAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCACAGCTGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CAA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTCATTCCCAGGTGAGTaGGGGTCCTCCCCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: PLFILISITLDCQAFPWQSFPGE*GSSPGL
Trigger: CAACCCTGGGGAGGACCCCAACTCACCTGGGAATGA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp CTCCCTTGCCTGCTTCTTAAGTGTGGTGAGCAGAGTTaGGCTTGCACTCCTCCTCAGCTGTGCCCAGAATCA +
Preference number: 3 (lower is better)
Translates to: LPCLLLKCGEQS*ACTPPQLCPES
Trigger: TGATTCTGGGCACAGCTGAGGAGGAGTGCAAGCTCAACTCTGCTCACCACACTTAAGAAGCAGGCAAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp AACATTGCCCAGCCTCTGACGACTCTTGTCCCCTCCTaGTTTCAGGCCTTTCCAGCCAGTACCAGCTTCTAT +
Preference number: 3 (lower is better)
Translates to: NIAQPLTTLVPS*FQAFPASTSFY
Trigger: ATAGAAGCTGGTACTGGCTGGAAAGGCCTGAAAGCAGGAGGGGACAAGAGTCGTCAGAGGCTGGGCAATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp TGTGGCTGCTCAATTCAGCCCCGCATCTACAAAGCCTaGCTTCACCAGCATGGTGTGTCTGCCTGGTTTGAT +
Preference number: 3 (lower is better)
Translates to: CGCSIQPRIYKA*LHQHGVSAWFD
Trigger: ATCAAACCAGGCAGACACACCATGCTGGTGAAGGCAGGCTTTGTAGATGCGGGGCTGAATTGAGCAGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp GTAGAGTCTGTGACCATGGCTTCCCACTTTTCTCAGTaGCCGGTGTCTGAGTCAGCATGCCACTTGCCATGT +
Preference number: 3 (lower is better)
Translates to: VESVTMASHFSQ*PVSESACHLPC
Trigger: ACATGGCAAGTGGCATGCTGACTCAGACACCGGGCACTGAGAAAAGTGGGAAGCCATGGTCACAGACTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp GGTGAGTGGGTGCTGCTCTTACCCCTCCCAGATTCTTaGCTAGGTCTCAGTTCCATCCCCAGGCTTAGTAAA +
Preference number: 3 (lower is better)
Translates to: GEWVLLLPLPDS*LGLSSIPRLSK
Trigger: TTTACTAAGCCTGGGGATGGAACTGAGACCTAGCCAAGAATCTGGGAGGGGTAAGAGCAGCACCCACTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp GCCAGGGACTCCTCCCGTCTGCTGGATTCACCATTCTaGTTATACCCTGCCACATGTGACAAGGTCAGGAAA +
Preference number: 3 (lower is better)
Translates to: ARDSSRLLDSPF*LYPATCDKVRK
Trigger: TTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAATCCAGCAGACGGGAGGAGTCCCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TGTCCACCCTGTGACCAGGCTACTGATGTAATGAGTTaGGTGAGATCAACTGGCCAGGAGCACAGTCCAACG +
Preference number: 3 (lower is better)
Translates to: CPPCDQATDVMS*VRSTGQEHSPT
Trigger: CGTTGGACTGTGCTCCTGGCCAGTTGATCTCACCCAACTCATTACATCAGTAGCCTGGTCACAGGGTGGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TGTTTGACTCTCCCTGGCCTCACTGAGAGCAGCCAGTaGGTCTCTTCTGCACAACTGGGTCATTCTGCAAAC +
Preference number: 3 (lower is better)
Translates to: CLTLPGLTESSQ*VSSAQLGHSAN
Trigger: GTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCACTGGCTGCTCTCAGTGAGGCCAGGGAGAGTCAAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp TGGCGCAGACAGCCTTTGGCACTTTGGTGTCAACATTaGTCTTGCCCTCCCTGTGCAGCCTGTAACTGTACA +
Preference number: 3 (lower is better)
Translates to: WRRQPLALWCQH*SCPPCAACNCT
Trigger: TGTACAGTTACAGGCTGCACAGGGAGGGCAAGATCAATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp TTGGACTACAGGCGACCAGATCAGTTCCAGCTGATATaGCCAGGAAGCGACATCTCAAGGACATTCACCCAG +
Preference number: 3 (lower is better)
Translates to: LDYRRPDQFQLI*PGSDISRTFTQ
Trigger: CTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTGATCTGGTCGCCTGTAGTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp CTGTGGCTGAGCTCTAACCTCTACTCCTGCATGTTCTaGTGGCCAATTGCACCTTCCTCAAGTACATCCACG +
Preference number: 3 (lower is better)
Translates to: LWLSSNLYSCMF*WPIAPSSSTST
Trigger: CGTGGATGTACTTGAGGAAGGTGCAATTGGCCACCAGAACATGCAGGAGTAGAGGTTAGAGCTCAGCCACAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CAA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGGTCAACGCTGTGTTTTaGAGGCCCCAGAACTTCTTT +
Preference number: 3 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLVNAVF*RPQNFF
Trigger: AAAGAAGTTCTGGGGCCTCAAAAACACAGCGTTGAC...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CAA 90 bp GTTCCTCTTCTTCAGGTCCAGAGACAGCAATTCCAAAGCAGCCTTCTGCATTTCTTCTACGACAGCTGCTaGCAGGTGTTCCACCTGGGC +
Preference number: 3 (lower is better)
Translates to: VPLLQVQRQQFQSSLLHFFYDSC*QVFHLG
Trigger: GCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAA...GAAATGCAGAAGGCTGCTTTGGAATTGCTGTCTCTGGACCTGAAGAAGAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR-3UTR CAA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGGCAAGCAAATGCAATTaGCCTCATTCCCAGGTGAGT +
Preference number: 3 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLASKCN*PHSQVS
Trigger: ACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGC...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp AGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTaGGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTT +
Preference number: 3 (lower is better)
Translates to: REQANAICLIPR*VGVLPRVADLL
Trigger: AAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp CATGGTTGGACTACAGGCGACCAGATCAGTTCCAGCTaGTATGCCCAGGAAGCGACATCTCAAGGACATTCA +
Preference number: 3 (lower is better)
Translates to: HGWTTGDQISSS*YAQEATSQGHS
Trigger: TGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTGATCTGGTCGCCTGTAGTCCAACCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp CCGAGCCTGAGAACCAGGGCTGGAGGATGTAACAAGTaGACAACCAAGAGAAGTCTTGTCTCTGACAACTCC +
Preference number: 3 (lower is better)
Translates to: PSLRTRAGGCNK*TTKRSLVSDNS
Trigger: GGAGTTGTCAGAGACAAGACTTCTCTTGGTTGTTCACTTGTTACATCCTCCAGCCCTGGTTCTCAGGCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp TCCACACAACCCGTGCATCCAACTGGCTTGACACTTTaGAAGGGCCTTCAAGCCCTCTCTTTGTCCAAGATG +
Preference number: 3 (lower is better)
Translates to: STQPVHPTGLTL*KGLQALSLSKM
Trigger: CATCTTGGACAAAGAGAGGGCTTGAAGGCCCTTTCAAAGTGTCAAGCCAGTTGGATGCACGGGTTGTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp CTCACTCTCTACTTCCTCATTTTTCAGCTTCAGTGCTaGGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCC +
Preference number: 3 (lower is better)
Translates to: LTLYFLIFQLQC*ASRSQVFFQDA
Trigger: GGCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAATGAGGAAGTAGAGAGTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR GCA 72 bp AGCTTCTCCTCCTTTAACGGGTACATTCAGTTTTTCTaGCTTCAGGGTGCTGGCAGTCCCATGTGGGAAGCA +
Preference number: 3 (lower is better)
Translates to: SFSSFNGYIQFF*LQGAGSPMWEA
Trigger: TGCTTCCCACATGGGACTGCCAGCACCCTGAAGGCAGAAAAACTGAATGTACCCGTTAAAGGAGGAGAAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp GCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTaGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCT +
Preference number: 3 (lower is better)
Translates to: ASKCNLPHSQVS*GPPQGCRFTSS
Trigger: AGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp CCATCCCCAGGCTTAGTAAAGAGGAATTCCAGATTATaGTGGGAGTGCCAGAGGAAGGTAATGGCCTGCTTC +
Preference number: 3 (lower is better)
Translates to: PSPGLVKRNSRL*WECQRKVMACF
Trigger: GAAGCAGGCCATTACCTTCCTCTGGCACTCCCACCATAATCTGGAATTCCTCTTTACTAAGCCTGGGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp GGAGCTGATGAAAACAGCAGTTGTCACCATTATTGGTaGGACACTCCACAGAGGCAATCCTGCTACTGGGCA +
Preference number: 3 (lower is better)
Translates to: GADENSSCHHYW*DTPQRQSCYWA
Trigger: TGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAACTGCTGTTTTCATCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TGGCTGAGCTCTAACCTCTACTCCTGCATGTTCTGGTaGCCAATTGCACCTTCCTCAAGTACATCCACGAGA +
Preference number: 3 (lower is better)
Translates to: WLSSNLYSCMFW*PIAPSSSTSTR
Trigger: TCTCGTGGATGTACTTGAGGAAGGTGCAATTGGCCACCAGAACATGCAGGAGTAGAGGTTAGAGCTCAGCCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp GGCAGCTCCTCTCTCAGATATACAACATGCCAGCTTTaGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCC +
Preference number: 3 (lower is better)
Translates to: GSSSLRYTTCQL*HRVVPLFILIS
Trigger: GGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR GCA 72 bp CACCATTATTGGTGGGACACTCCACAGAGGCAATCCTaGTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCG +
Preference number: 3 (lower is better)
Translates to: HHYWWDTPQRQS*YWARKVYFRKP
Trigger: CGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp CATTCTGCAAACTTTCATCTGTGTCCAGGTTCTGTGTaGCTAGAGGTGAGCTCCTTCTCAGAGATCCCTGTG +
Preference number: 3 (lower is better)
Translates to: HSANFHLCPGSV*LEVSSFSEIPV
Trigger: CACAGGGATCTCTGAGAAGGAGCTCACCTCTAGGCACACAGAACCTGGACACAGATGAAAGTTTGCAGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTaGAAGATCATCCACAAGCTCGAGTGTGAGGGCAAG +
Preference number: 3 (lower is better)
Translates to: YWARKVYFRKPE*KIIHKLECEGK
Trigger: CTTGCCCTCACACTCGAGCTTGTGGATGATCTTCCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TCTGGAGCTGATGAAAACAGCAGTTGTCACCATTATTaGTGGGACACTCCACAGAGGCAATCCTGCTACTGG +
Preference number: 3 (lower is better)
Translates to: SGADENSSCHHY*WDTPQRQSCYW
Trigger: CCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAACTGCTGTTTTCATCAGCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR-3UTR CAA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTCCTCAACAGGAATCTTaGGCAAGTTCTTCCCAGATA +
Preference number: 3 (lower is better)
Translates to: QFQLICPGSDISRTFTQSPQQES*ASSSQI
Trigger: TATCTGGGAAGAACTTGCCAAAGATTCCTGTTGAGG...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp TTCAGGTCCAGAGACAGCAATTCCAAAGCAGCCTTCTaGATTTCCCGTTGCTTCTCCAGTTCCTGGATTTGT +
Preference number: 3 (lower is better)
Translates to: FRSRDSNSKAAF*ISRCFSSSWIC
Trigger: ACAAATCCAGGAACTGGAGAAGCAACGGGAAATGCAGAAGGCTGCTTTGGAATTGCTGTCTCTGGACCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
3UTR CCA 72 bp ACAGGAGGTGCAAGGGCAATGTGTGGATTATTAATCTaGCCTTCCCTGATTCCCTCACCTGAACAACTGGTA +
Preference number: 3 (lower is better)
Translates to: TGGARAMCGLLI*PSLIPSPEQLV
Trigger: TACCAGTTGTTCAGGTGAGGGAATCAGGGAAGGCCAGATTAATAATCCACACATTGCCCTTGCACCTCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp ATAGGAAACCAAGACAGGAGGTGCAAGGGCAATGTGTaGATTATTAATCTGGCCTTCCCTGATTCCCTCACC +
Preference number: 3 (lower is better)
Translates to: IGNQDRRCKGNV*IINLAFPDSLT
Trigger: GGTGAGGGAATCAGGGAAGGCCAGATTAATAATCCACACATTGCCCTTGCACCTCCTGTCTTGGTTTCCTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TTTCTGCCGTCTGCTCAGAGGTCTAACCTGAATGAATaGATAACACCTGCCATTGCTTCTGGATGTACCCCT +
Preference number: 3 (lower is better)
Translates to: FLPSAQRSNLNE*ITPAIASGCTP
Trigger: AGGGGTACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGCAGACGGCAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp CTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTaGTGCCCCTTTTCATTCTTATCTCCATCACCCTTG +
Preference number: 3 (lower is better)
Translates to: LSDIQHASFGTG*CPFSFLSPSPL
Trigger: CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR GCA 72 bp ACGGGAGAGGTTTTGATAGGAAACCAAGACAGGAGGTaGAAGGGCAATGTGTGGATTATTAATCTGGCCTTC +
Preference number: 3 (lower is better)
Translates to: TGEVLIGNQDRR*KGNVWIINLAF
Trigger: GAAGGCCAGATTAATAATCCACACATTGCCCTTGCACCTCCTGTCTTGGTTTCCTATCAAAACCTCTCCCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp CCAGTTACTGTGTATCTAAAACAAATATCCACCGCATaGTACCCCCTTGGCTGCTCAACTACCACACACAAC +
Preference number: 3 (lower is better)
Translates to: PVTVYLKQISTA*YPLGCSTTTHN
Trigger: GTTGTGTGTGGTAGTTGAGCAGCCAAGGGGGTAGCATGCGGTGGATATTTGTTTTAGATACACAGTAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp GTGGAGCTTTGTTTAAATGAGTATTTGCCAAATGACTaGATAGCTGGGGCAGGAGCAGCAGCTAGCCAATCT +
Preference number: 3 (lower is better)
Translates to: VELCLNEYLPND*IAGAGAAASQS
Trigger: AGATTGGCTAGCTGCTGCTCCTGCCCCAGCTATTCAGTCATTTGGCAAATACTCATTTAAACAAAGCTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTaGCCCTTTTCATTCTTATCTCCATCACCCTTGATT +
Preference number: 3 (lower is better)
Translates to: SDIQHASFGTGW*PFSFLSPSPLI
Trigger: AATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR CCA 72 bp ATACAGATTAGTCTAGTCCTGAATAAAGACCCTGCTTaGCAGCCTCTAAGATGTCTTTCAGCTGCTGGAACC +
Preference number: 3 (lower is better)
Translates to: IQISLVLNKDPA*QPLRCLSAAGT
Trigger: GGTTCCAGCAGCTGAAAGACATCTTAGAGGCTGCCAAGCAGGGTCTTTATTCAGGACTAGACTAATCTGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp CTGGGGTTTCAGAAGTTTTCACTAAGCATCTGTTGCTaGGCTGCATGTGTAGGTTTCTGGAACAAAGCTCTA +
Preference number: 3 (lower is better)
Translates to: LGFQKFSLSICC*AACVGFWNKAL
Trigger: TAGAGCTTTGTTCCAGAAACCTACACATGCAGCTCAGCAACAGATGCTTAGTGAAAACTTCTGAAACCCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp AACAAAATGCAAATATCCCACATAAACCGACATCCCTaGCACATTGTGGTGCACCAGGTGTCTAGGAATGAG +
Preference number: 3 (lower is better)
Translates to: NKMQISHINRHP*HIVVHQVSRNE
Trigger: CTCATTCCTAGACACCTGGTGCACCACAATGTGTCAGGGATGTCGGTTTATGTGGGATATTTGCATTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp GTCTTGTGTGTTCTCTGTAACCCTTCCCTATCACAGTaGATGGTGTACAATAAATGCATGCTACCTCAACAG +
Preference number: 3 (lower is better)
Translates to: VLCVLCNPSLSQ*MVYNKCMLPQQ
Trigger: CTGTTGAGGTAGCATGCATTTATTGTACACCATGCACTGTGATAGGGAAGGGTTACAGAGAACACACAAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR GCA 72 bp GTTTCAGAAGTTTTCACTAAGCATCTGTTGCTGAGCTaGATGTGTAGGTTTCTGGAACAAAGCTCTAGTCGC +
Preference number: 3 (lower is better)
Translates to: VSEVFTKHLLLS*MCRFLEQSSSR
Trigger: GCGACTAGAGCTTTGTTCCAGAAACCTACACATGCAGCTCAGCAACAGATGCTTAGTGAAAACTTCTGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp TCTAGTCAGTACACAGAATTGCCTCTGACTCATAAATaGGTGTTAGCCTGTTCTCATCAACTGGACTGTAGG +
Preference number: 3 (lower is better)
Translates to: SSQYTELPLTHK*VLACSHQLDCR
Trigger: CCTACAGTCCAGTTGATGAGAACAGGCTAACACTCATTTATGAGTCAGAGGCAATTCTGTGTACTGACTAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CCA 72 bp TGTGTGTTCTCTGTAACCCTTCCCTATCACAGTGCATaGTGTACAATAAATGCATGCTACCTCAACAGGAAT +
Preference number: 3 (lower is better)
Translates to: CVFSVTLPYHSA*CTINACYLNRN
Trigger: ATTCCTGTTGAGGTAGCATGCATTTATTGTACACCATGCACTGTGATAGGGAAGGGTTACAGAGAACACACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR TCA 72 bp GTACAAGAACACTTGGACATTAGATTTGCGGCAATTTaGGCATCAAAAATAGCAACTGTCATGATTGAATCA +
Preference number: 3 (lower is better)
Translates to: VQEHLDIRFAAI*ASKIATVMIES
Trigger: TGATTCAATCATGACAGTTGCTATTTTTGATGCTCAAATTGCCGCAAATCTAATGTCCAAGTGTTCTTGTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATAGCTGGGCCTGGGCCTaGGCCTGGTTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYSWAWA*AWFPGC
Trigger: GCAGCCCGGGAACCAGGCCCAGGCCCAGGCCCAGCT...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGGCTGCCTTGGCTTCCTaGGCCCACAAGGAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: AEPSLGPPSVRPALAEPGAALAS*AHKEAR
Trigger: GCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGC...CCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp GTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACTTGCCTAGCTGGGCCTGGGCCTaGGCCTGGTTCCCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLSEPFSGLLPGCQQHLPSWAWA*AWFPGC
Trigger: GCAGCCCGGGAACCAGGCCCAGGCCCAGGCCCAGCT...AGGCAAGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGGCTCCTGGCTGTGGCTaGTACCTGGAGGCGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQAPGCG*YLEAAW
Trigger: CCAAGCCGCCTCCAGGTAGCAGCCACAGCCAGGAGC...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATCGCCAGGAGGCTGCCTaGTTCTCTGCCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYRQEAA*FSAICC
Trigger: GCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCG...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCGCCAGGAGGCTGCCTaGTTCTCTGCCATCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPRQEAA*FSAICC
Trigger: GCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCG...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGCAGCTGCCGACTGTGTaGCTGGCAGGCATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQQLPTV*LAGIQG
Trigger: TCCCTGGATGCCTGCCAGGCACACAGTCGGCAGCTG...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCAGAATGCAGCTGCGCCTaGAGAAGGCGGCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: LPPPGRPAKHFSPALRPPECSCA*RRRLRS
Trigger: GCTTCTCAGCCGCCTTCTCCAGGCGCAGCTGCATTC...TGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp CTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCAGAGTCCACCTCTCCCTaGAGGTCCACAGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LPPPGRPAKHFSPALRPPESTSP*RSTVCP
Trigger: AGGGCAGACTGTGGACCTCCAGGGAGAGGTGGACTC...TGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGGCTCTCGCTCCTTGCTaGGAGAGTCCACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQALAPC*ESPPLP
Trigger: AGGGAGAGGTGGACTCTCTCAGCAAGGAGCGAGAGC...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTTCCCTGAGATCTGCCTaGAGCTCAGCCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RQVDLQSISRLLCGLHSASLRSA*SSAPAS
Trigger: GGAGGCTGGGGCTGAGCTGCAGGCAGATCTCAGGGA...AGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTAGCTGGCTCTCTGTaGTGCGCAGTCGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: AEPSLGPPSVRPALAEPGLAGSL*CAVAAV
Trigger: TACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAG...CCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CCTGGATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGCCTGGTTCCCGGGCTaGTGCTCTGCGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGFVPAESPPPLLFQLGSAWFPG*CSAASA
Trigger: AGCGCTGGCCGCAGAGCAGCAGCCCGGGAACCAGGC...AGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAATCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCCTTGTGGAGGGCAGATaGTACTGCCTCAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: PWATFSSPCSCRAWALSRLVEGR*YCLSGE
Trigger: CTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAG...GCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCGATGCCAGCAGCACTTaGCTGAGCCCTGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: PWATFSSPCSCRAWALSRDASST*LSPGFY
Trigger: GTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATC...GCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATGCCTGCTCAGCACACTaGTGCTGGAGGGCCAACAGA +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYACSAH*CWRANR
Trigger: TCTGTTGGCCCTCCAGCAGCAGTGTGCTGAGCAGGC...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATCGTTCTCGCTCCACCTaGTCCAAGGTACTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYRSRST*SKVLRS
Trigger: GCTGCGGAGTACCTTGGAGCAGGTGGAGCGAGAACG...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGAGCTCCATTCTGGTCTaGCTCAAGGCCCCAGACGGA +
Preference number: 4 (lower is better)
Translates to: AEPSLGPPSVRPALAEPGSSILV*LKAPDG
Trigger: TCCGTCTGGGGCCTTGAGCCAGACCAGAATGGAGCT...CCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR TCA 90 bp TGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATCCTGGAGAAGGCGGCTaGGAAGCGATACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: CLRQVDLQSISRLLCGLHPGEGG*EAILQQ
Trigger: CTGCTGAAGTATCGCTTCTCAGCCGCCTTCTCCAGG...ATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTGGCCAGCTGTCTGGCTaGAGCATCCCGCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPGQLSG*SIPLLL
Trigger: GAGCAGGAGCGGGATGCTGCAGCCAGACAGCTGGCC...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCGCAAGGTCATCTCTGTaGTGCCGGGCTGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEAARSSL*CRAASF
Trigger: GAAGGAGGCAGCCCGGCAGCACAGAGATGACCTTGC...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTGAAGTAACTCTCGCTCACCCTGGGCTTCCATTCGCTGTAGCTCTGCTCTCCTGGTTCCCGGGCTGCTaGTCTGCGGCCAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: PEVTLAHPGLPFAVALLSWFPGC*SAASAS
Trigger: AGAAGCGCTGGCCGCAGAGCAGCAGCCCGGGAACCA...GGAGAGCAGAGCTACAGCGAATGGAAGCCCAGGGTGAGCGAGAGTTACTTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTAGTTCGCCCTGCTCTTaGAGAGCCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: PSLGPPSVRPALAEPGLSSSPCS*RAWALS
Trigger: TGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACT...AGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTGCTCAGCACACTGCTaGTGGAGGGCCAACAGAGCT +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYCSAHC*WRANRA
Trigger: AGCTCTGTTGGCCCTCCAGCAGCAGTGTGCTGAGCA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATACACTGGCCTTGGTCTaGGCTAGGGAGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYTLALV*ARESAK
Trigger: CTTGGCACTCTCCCTAGCGCAGACCAAGGCCAGTGT...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCAGCCCCAACCCCCTaGCACAGTCAGACCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQSAPTP*HSQTSL
Trigger: AAGACTGGTCTGACTGTGGCAGGGGGTTGGGGCTGA...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCGCCCTGAAGCCCCGATaGAACTGGAGACCACGCCAT +
Preference number: 4 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEAALKPR*NWRPRH
Trigger: ATGGCGTGGTCTCCAGTTGCATCGGGGCTTCAGGGC...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCTCACTCTGCCAGCGCTTCTAGCTaGCTCTCTGTGCTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: PPSVRPALAEPGLSHAHSASASS*LSVLRS
Trigger: ACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGC...AGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp CCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCTCACTCTTGCAGAGCCTTCCCTTaGGCCACCTTCAGTTCGCCC +
Preference number: 4 (lower is better)
Translates to: PPSVRPALAEPGLSHAHSCRAFP*ATFSSP
Trigger: GGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCA...AGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACTTCCTGTGCAGGCCCTaGAGCTGCTGCTCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNFLCRP*SCCSSW
Trigger: CCAGCTGGAGCAGCAGCTCCAGGGCCTGCACAGGAA...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGGTGGCCTCAGGGGCCTaGGCCACGGCAAGAAGTGAG +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWVASGA*ATARSE
Trigger: CTCACTTCTTGCCGTGGCCCAGGCCCCTGAGGCCAC...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGCCGACCTGGGGCTCCTaGGTGCCTAACAGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWPTWGS*VPNRAR
Trigger: CCTGGCTCTGTTAGGCACCCAGGAGCCCCAGGTCGG...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp GGGGCCCCAGACCTGGCGCAGACAGCCTTTGGCACTTaGGTGTCAACATTGATCTTGCCCTCCCTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GAPDLAQTAFGT*VSTLILPSLCS
Trigger: GCTGCACAGGGAGGGCAAGATCAATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCCAGGTCTGGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCCCTCCCGCCATAGACTaGGAAGGCGACCGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSPPAID*EGDRAP
Trigger: GGGAGCACGGTCGCCTTCTCAGTCTATGGCGGGAGG...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTGGTCAACAGAGACCCTaGAAGCCTCACATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPGQQRP*KPHMLS
Trigger: GCTGAGCATGTGAGGCTTTCAGGGTCTCTGTTGACC...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTGAGTCCCCCTGCAGCTaGAGCTCCACATTTACCCTT +
Preference number: 4 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPESPCS*SSTFTL
Trigger: AAGGGTAAATGTGGAGCTTCAGCTGCAGGGGGACTC...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCCCCATCAGCATCTCCTaGAGACGCTCCCTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGPISIS*RRSLSR
Trigger: CCGGGAGAGGGAGCGTCTTCAGGAGATGCTGATGGG...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCCGACAGCTCTGCAATTaGCTGCTCTGCCCTAGCCAG +
Preference number: 4 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEARQLCN*LLCPSQ
Trigger: CTGGCTAGGGCAGAGCAGTCAATTGCAGAGCTGTCG...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGCCCTGCAGGGCAGCATaGGCCTTGCCAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLPCRAA*ALPRAS
Trigger: GGAGGCCCTTGGCAAGGCTCATGCTGCCCTGCAGGG...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCCCAGAGCCCGTCTGGTaGGCTCCAGTTCATCCTGCA +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPPEPVW*APVHPA
Trigger: TGCAGGATGAACTGGAGCTCACCAGACGGGCTCTGG...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCAGCACGTGGGATCCTTaGGAGAACAGGGGCAGCACC +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPSTWDP*ENRGST
Trigger: GGTGCTGCCCCTGTTCTCTCAAGGATCCCACGTGCT...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCGGGTTCCCGAGACTGTaGTCCCACAGTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: FLACSAASILLHTDWFSSGFPRL*SHSQAQ
Trigger: CTGCGCTTGACTGTGGGAGCACAGTCTCGGGAACCC...GGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTGCTGCCTTAGGTCCTaGACAGCCTGGCGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: FLACSAASILLHTDWFSSCCLRS*TAWRLR
Trigger: TCGGAGACGCCAGGCTGTGCAGGACCTAAGGCAGCA...GGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCGGCCTCCATTCTGCTaGACACAGACTGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPRPPFC*TQTGSP
Trigger: AGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCG...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTTCCGCCAGGTCGACCTaGAAAGCATTTCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTSARST*KAFLAC
Trigger: GCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGA...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTTCCCTCCTCTTCTCTaGCTCCGCCAGGTCGACCTG +
Preference number: 4 (lower is better)
Translates to: FLACSAASILLHTDWFSSFPPLL*LRQVDL
Trigger: CAGGTCGACCTGGCGGAGGCAGAGAAGAGGAGGGAA...GGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GTAACTCTCGCTCACCCTGGGCTTCCATTCGCTGTAGCTCTGCTCTCCGCAGGCACCTTCAGTTCGCCCTaGTCTTGCAGAGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VTLAHPGLPFAVALLSAGTFSSP*SCRAWA
Trigger: AGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGT...GCCTGCGGAGAGCAGAGCTACAGCGAATGGAAGCCCAGGGTGAGCGAGAGTTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGACTGCGGCTCAATTCTaGCTGCTCGAGGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQTAAQF*LLEEML
Trigger: CAGCATCTCCTCGAGCAGGCAGAATTGAGCCGCAGT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCCCATTCCCCCGCTCTaGAGAGTACTGGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTPIPPL*RVLGQK
Trigger: CTTCTGACCCAGTACTCTGCAGAGCGGGGGAATGGG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTGCTCCAGCTGAGTCGTaGCTGCCTCCTGCTGGTGAC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPAPAES*LPPAGD
Trigger: GTCACCAGCAGGAGGCAGCCACGACTCAGCTGGAGC...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCCCTGGGCCAGCTGTCTaGCTGCAGCATCCCGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSPGPAV*LQHPAP
Trigger: AGGAGCGGGATGCTGCAGCCAGACAGCTGGCCCAGG...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCTCTTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCGGGCAGAGTAGAGGCTaGCCAGCTGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLSARVWVRRAKFSCRAFGQSRG*PAGPGP
Trigger: AGGCCCAGGCCCAGCTGGCCAGCCTCTACTCTGCCC...GAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATAACTCTCGCTCACCCTaGGCTTCCATTCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYNSRSP*ASIRCS
Trigger: GCTACAGCGAATGGAAGCCCAGGGTGAGCGAGAGTT...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTGGCCCAGAAGGTATGTaGGGCCTAAGGCCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPGPEGM*GLRPWL
Trigger: GAGCCAGGGCCTTAGGCCCCACATACCTTCTGGGCC...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGGGCCTCCAGTTGCAATaGCTCCAGCCTTTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQGLQLQ*LQPFLG
Trigger: ACCAAGGAAAGGCTGGAGCCATTGCAACTGGAGGCC...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTTCGGTCACCCGGTCCTaGAGTTCAGCCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FSPALRPPFCCTQTGSPPSVTRS*SSAFSR
Trigger: TCTGGAGAAGGCTGAACTTCAGGACCGGGTGACCGA...AGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp CGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTTCTCCGAGTCAGCACTaGACGCACCAGAGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: RQVDLQSISRLLCGLHSASPSQH*THQSKS
Trigger: GCTCTTACTCTGGTGCGTTCAGTGCTGACTCGGAGA...AGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp TCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGAAGTTCACAGCCTCTTaGCAGCCTGCAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SARSTCKAFLACSAASILKFTAS*QPASCC
Trigger: GCAGCAGCTTGCAGGCTGTCAAGAGGCTGTGAACTT...CAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTGCTGCCTCCTGCTGGTaGCGTGACTCACTTAGTTTC +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTAASCW*RDSLSF
Trigger: GAAACTAAGTGAGTCACGTCACCAGCAGGAGGCAGC...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCTGTCAGCCCGAGCCTaGGAACCAGGGCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGLSARA*EPGLED
Trigger: ATCCTCCAGCCCTGGTTCTCAGGCTCGGGCTGACAG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGATACCCTGCCACATGTaGCAAGGTCAGGAAAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQIPCHM*QGQERR
Trigger: CCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTAT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTCCCATGGGCTGAGATaGGGCCTGCAGGCAAAGCCT +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSHGLR*GLQAKP
Trigger: AGGCTTTGCCTGCAGGCCTCATCTCAGCCCATGGGA...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATAGCTCAATCCCTCTCTaGTGGTTGGAGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: CLRQVDLQSISRLLCGLHSSIPL*WLEAQI
Trigger: GATCTGTGCCTCCAACCAGCAGAGAGGGATTGAGCT...ATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCAACTCCTGCTCCATCTaGCACTGGCTCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEANSCSI*HWLSFL
Trigger: GAGGAAGGAGAGCCAGTGGCAGATGGAGCAGGAGTT...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTGCTGTCTCAAGGCTTTaGCCTCTTCCTCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPAVSRL*PLPPTD
Trigger: ATCAGTGGGAGGAAGAGGGCAAAGCCTTGAGACAGC...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATACTGAGCTTGACAGCTaGAGCCCGAAGATCAGCTAC +
Preference number: 4 (lower is better)
Translates to: CLRQVDLQSISRLLCGLHTELDS*SPKISY
Trigger: GTAGCTGATCTTCGGGCTGCAGCTGTCAAGCTCAGT...ATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTTCCGCCAGGTCGACCTaGAAAGCATTTCTCGCCTGC +
Preference number: 4 (lower is better)
Translates to: FSPALRPPFCCTQTGSPPSARST*KAFLAC
Trigger: GCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGA...AGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGTGTTCAGCGAGGTCCTaGCGGTCACGCTCCACGGCC +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLCSARS*RSRSTA
Trigger: GGCCGTGGAGCGTGACCGGCAGGACCTCGCTGAACA...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCTGGGCTGCCTTCTGCTaGTCCAAGGCAGTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPWAAFC*SKAVFP
Trigger: AGGGAAGACTGCCTTGGAGCAGCAGAAGGCAGCCCA...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACTCTGTGCTGCCGGGCTaGCTCCTTCAGCTCCCGTTG +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHSVLPG*LLQLPL
Trigger: CAACGGGAGCTGAAGGAGGCAGCCCGGCAGCACAGA...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACATCTCCCTGGGCCTCCTaGATGTCCTGGCGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTSPWAS*MSWRRA
Trigger: TGCCCTGCGCCAGGACATGCAGGAGGCCCAGGGAGA...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCTCACTCTCTACTTCCTGCTGGCTCTCTGTGCTaGGCAGTCGCAGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: VRPALAEPGLSHAHSLLPAGSLC*AVAAVV
Trigger: AACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGC...AGGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGGCCTGGTTCCCGGGCTaGTGCTCTGCGGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQAWFPG*CSAASA
Trigger: AGCGCTGGCCGCAGAGCAGCAGCCCGGGAACCAGGC...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCTCTTGCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGGAGGGCAGATGCTACTaGCTCAGCGGAGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: SLAEPSLGPPSVRPALAEEGRCY*LSGESS
Trigger: ACTGCTCTCTCCGCTGAGGCAGTAGCATCTGCCCTC...CTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCACCTTCAGTTCGCCCTaGTCTTGCAGAGCCTGGGCT +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPTFSSP*SCRAWA
Trigger: AGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGT...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATCTGGCTTCCTGCAGTTaGTGCTGCAGGACCACTATT +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYLASCS*CCRTTI
Trigger: AATAGTGGTCCTGCAGCAGCAACTGCAGGAAGCCAG...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCTCCCTGGAGGGCGTCTaGCTTTTCCTTCACCCTCTC +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPSLEGV*LFLHPL
Trigger: GAGAGGGTGAAGGAAAAGGCAGACGCCCTCCAGGGA...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTTGCCAAGGGCCTCCTaGAGAGCCTCAGCCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTLPRAS*RASARA
Trigger: GGCCCGGGCTGAGGCTCTGCAGGAGGCCCTTGGCAA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGTGGGCAAGTGCCTGCTaGAGCTGCTGCACATCCTCC +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWWASAC*SCCTSS
Trigger: GGAGGATGTGCAGCAGCTGCAGCAGGCACTTGCCCA...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTTGGGTGAGTGGGTGCTaGTCTTACCCCTCCCAGATT +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTWVSGC*SYPSQI
Trigger: AATCTGGGAGGGGTAAGAGCAGCACCCACTCACCCA...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATATGAGAACACCCACATaGTGTGGGTGTCGAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYMRTPT*CGCRSL
Trigger: GAGGCTTCGACACCCACAGCATGTGGGTGTTCTCAT...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTCCCACTTTTCTCAGTaGCCGGTGTCTGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYSHFSQ*PVSESA
Trigger: TGCTGACTCAGACACCGGGCACTGAGAAAAGTGGGA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGCCACCCAGGCTGGAGTaGAGTGACGCGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWPPRLE*SDAISA
Trigger: AGCTGAGATCGCGTCACTGCACTCCAGCCTGGGTGG...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATAAGTAGCAGCAGCAGCTaGGCCGGCTCCCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISSSSS*AGSRPS
Trigger: GGATGGGCGGGAGCCGGCCCAGCTGCTGCTGCTACT...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCAGGTCCTGCACAGCCTaGCGTCTCCGAGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSRSCTA*RLRVST
Trigger: AGTGCTGACTCGGAGACGCCAGGCTGTGCAGGACCT...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGCTGCTGCACACAGACTaGTTCTCCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQLLHTD*FSSSNW
Trigger: CCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAG...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCCGTTCTTCTTCCCTCTaGGCCTGGATGGCCTCCATT +
Preference number: 4 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEARSSSL*AWMASI
Trigger: AATGGAGGCCATCCAGGCCCAGAGGGAAGAAGAACG...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCTCTTGCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGTGCTCTTGCAGAGCCTaGGCTCTCTCACGCTCACTC +
Preference number: 4 (lower is better)
Translates to: SLAEPSLGPPSVRPALAECSCRA*ALSRSL
Trigger: GAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCA...CTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp TTGGGCCACCTTCAGTTCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCTCCTTTCAGCTAGGGTCTaGGTCAGGAGGGCCAAATTC +
Preference number: 4 (lower is better)
Translates to: LGHLQFALLLQSLGSLTLLSARV*VRRAKF
Trigger: GAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAG...GAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACTGAAGGTGGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGTTCCTGGTCCCTCTaGGCTAGGGCTCTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGSSWSL*ARALWA
Trigger: GGCCCAGAGAGCCCTAGCCCAGAGGGACCAGGAACT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCAGAGCCTCCAGTTCCTaGTCCCTCTGGGCTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGRASSS*SLWARA
Trigger: AGCCCTAGCCCAGAGGGACCAGGAACTGGAGGCTCT...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACATGGGGGCCCCAGACCTaGCGCAGACAGCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTWGPQT*RRQPLA
Trigger: TGCCAAAGGCTGTCTGCGCCAGGTCTGGGGCCCCCA...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGATCTCCAGAGGCCGGTaGATGCTCGGTCCTGGGCTC +
Preference number: 4 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLISRGR*MLGPGL
Trigger: GAGCCCAGGACCGAGCATCCACCGGCCTCTGGAGAT...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCGCCCTGCTCTTGCAGAGCCTGGGCTCTCTCACGCTCACTCTCTACTTCCTCATTCTCCTTGGCTGCCTaGAGTAACTCTCGCTCACCC +
Preference number: 4 (lower is better)
Translates to: SPCSCRAWALSRSLSTSSFSLAA*SNSRSP
Trigger: GGGTGAGCGAGAGTTACTTCAGGCAGCCAAGGAGAA...TGAGGAAGTAGAGAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR TCA 90 bp CCTGGATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTCCAGCAGCACTTGCCTaGGCCCTGGCTTCTACGACA +
Preference number: 4 (lower is better)
Translates to: PGFVPAESPPPLLFQLGSPAALA*ALASTT
Trigger: TGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGG...AGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAATCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR TCA 90 bp CAGCTGCTTGCAGGTGTTCCACCTGGGCTGTCAGGTTCTCCTTGGCTGCCTGAATTTCAGCTTCAGTGCTaGGCGAGCCGTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: QLLAGVPPGLSGSPWLPEFQLQC*ASRSQV
Trigger: GACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAA...TTCAGGCAGCCAAGGAGAACCTGACAGCCCAGGTGGAACACCTGCAAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR TCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTACTGGCTTGACACTTTaGAAGGGCCTTCAAGCCCTC +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTTGLTL*KGLQAL
Trigger: GAGGGCTTGAAGGCCCTTTCAAAGTGTCAAGCCAGT...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTGTTCTGCGGACGGTTaGGGAAGGGATGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPCSADG*GRDGGQ
Trigger: TTGGCCTCCATCCCTTCCTCAACCGTCCGCAGAACA...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGCTGGTCTCCAACTCCTaGGCTCAGGCAATCCGCCTG +
Preference number: 4 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLLVSNS*AQAIRL
Trigger: CAGGCGGATTGCCTGAGCTCAGGAGTTGGAGACCAG...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATAGGGTCTCTAACCATTaGCATGCCACTTCAACCTCC +
Preference number: 4 (lower is better)
Translates to: CLRQVDLQSISRLLCGLHRVSNH*HATSTS
Trigger: GGAGGTTGAAGTGGCATGGCAATGGTTAGAGACCCT...ATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTACTTCCTCACAAGGGTTaGTTGTCTCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SPALRPPFCCTQTGSPPLLPHKG*LSLLGL
Trigger: GAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAG...TAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGCACCAGCTTCGGTACTaGAGCACCTTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLHQLRY*STLACS
Trigger: GCTGCAGGCCAAGGTGCTGCAGTACCGAAGCTGGTG...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACCCCTTGAAGAACTCCTaGTCCATCTGCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNPLKNS*SICHWL
Trigger: GAGCCAGTGGCAGATGGAGCAGGAGTTCTTCAAGGG...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACAGAAGCGAATGCAGCTaGGCCTGGAGAAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHRSECS*AWRRRL
Trigger: CAGCCGCCTTCTCCAGGCGCAGCTGCATTCGCTTCT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCAGAAGCGAATGCAGCTaGGCCTGGAGAAGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: ASILLHTDWFSSSNWRSCRSECS*AWRRRL
Trigger: CAGCCGCCTTCTCCAGGCGCAGCTGCATTCGCTTCT...GCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCAAACCGAGAAGCGAATaGAGCTGCGCCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPKPRSE*SCAWRR
Trigger: CCTTCTCCAGGCGCAGCTGCATTCGCTTCTCGGTTT...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGGGGAAAGTAACTCGGTaGACAGCGAGTGCAAAAACC +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQGKVTR*TASAKT
Trigger: GGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCC...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGTGGAGGTCCACAGTCTaGCCTGCCAGAGTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRWRSTV*PARVSR
Trigger: GCGGGACACTCTGGCAGGGCAGACTGTGGACCTCCA...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTCTTCCCTGGCCTTCTaGAGCAGCTCTCGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSSSLAF*SSSRSL
Trigger: CAAGGAGCGAGAGCTGCTGCAGAAGGCCAGGGAAGA...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTGCGGTCACTTCCGTTTaGTCTTGCCTCAGTAACTCC +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTAVTSV*SCLSNS
Trigger: GGAGTTACTGAGGCAAGAGCAAACGGAAGTGACCGC...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGTTCCCTCCTCTTCTCTaGCTCCGCCAGGTCGACCTG +
Preference number: 4 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLFPPLL*LRQVDL
Trigger: CAGGTCGACCTGGCGGAGGCAGAGAAGAGGAGGGAA...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACCTCCTTCTCCTGGACTaGCCTGGCAAGCACTTCTTC +
Preference number: 4 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNLLLLD*PGKHFF
Trigger: GAAGAAGTGCTTGCCAGGGCAGTCCAGGAGAAGGAG...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTAGGTCATCTCTGTGCTaGCGGGCTGCCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPRSSLC*RAASFS
Trigger: GCTGAAGGAGGCAGCCCGGCAGCACAGAGATGACCT...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGGCCCTGGAGCTGCTaGTCCAGCTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGRPWSC*SSWSLS
Trigger: GCTCAAAGACCAGCTGGAGCAGCAGCTCCAGGGCCT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCAGCACTGCCTGGGCCTaGAGCCAGCTGTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSSTAWA*SQLSCR
Trigger: CCTGCAGGACAGCTGGCTGCAGGCCCAGGCAGTGCT...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGCTGGCCTCCAGACTaGGGCTCAATTCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGCWPPD*GSILPA
Trigger: AGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCA...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTAGCCGGGCCACTGCTTaGTGCAGGTGTTCAAGCCTT +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSRATA*CRCSSL
Trigger: AAGGCTTGAACACCTGCAGCAAGCAGTGGCCCGGCT...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCTGTGGCGCTGCAGCCTaGTCCTGTCAATCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSCGAAA*SCQSPA
Trigger: GGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACA...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGACCAGAGGCCGGTGGATaGTCGGTCCTGGGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGPEAGG*SVLGSG
Trigger: CCCAGAGCCCAGGACCGAGCATCCACCGGCCTCTGG...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTCTCTGCTGGGCCTCCTaGGAGTTCTTCAGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPLCWAS*EFFSFR
Trigger: GCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCAGAG...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCGTTGCTTGTCTCTGCTaGGCCTCCTGGGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: FLACSAASILLHTDWFSSVACLC*ASWEFF
Trigger: GAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAAC...GGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCCGCTTCTCCAGCTCTTaGCACCAGCTTCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSRFSSS*HQLRYC
Trigger: GCAGTACCGAAGCTGGTGCCAAGAGCTGGAGAAGCG...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTTCTCCTCCTCTAACTaGAGAAGCTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYFSSSN*RSCWFS
Trigger: GCTGAACCAGCAGCTTCTCCAGTTAGAGGAGGAGAA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGGGCCTCCTTCTCCTaGACTGCCCTGGCAAGCACT +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGRASFS*TALAST
Trigger: AGTGCTTGCCAGGGCAGTCCAGGAGAAGGAGGCCCT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTGCCAGCGCTTCTAGCTaGCTCTCTGTGCTGCGCAGT +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPASASS*LSVLRS
Trigger: ACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGC...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTAGCTCCATTCTGGTCTaGCTCAAGGCCCCAGACGGA +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSSILV*LKAPDG
Trigger: TCCGTCTGGGGCCTTGAGCCAGACCAGAATGGAGCT...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTGGGAACTCTCGCTCACCCTaGGCTTCCATTCGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QLGSGSGGPNSLAEPSLGNSRSP*ASIRCS
Trigger: GCTACAGCGAATGGAAGCCCAGGGTGAGCGAGAGTT...CCCAAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp GTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACTTGCCTCACTTGCCTGAGCCCTaGCTTCTACGACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: VLSEPFSGLLPGCQQHLPHLPEP*LLRQLL
Trigger: AAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTG...AGGCAAGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCCCTCCTCCAGGATCTTaGTCTGCCGGGTCCTCTGAT +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGPPPGS*SAGSSD
Trigger: ATCAGAGGACCCGGCAGACCAAGATCCTGGAGGAGG...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCATTTCCTGCTCTCGCTaGGACAGGAGGAGGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGISCSR*DRRRLV
Trigger: GACCAGCCTCCTCCTGTCCCAGCGAGAGCAGGAAAT...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGCCTGGGCCGCACGCATaGCCTCCCTCTTCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWPGPHA*PPSSAS
Trigger: GGAAGCTGAAGAGGGAGGCCATGCGTGCGGCCCAGG...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCGAACACCCGCCGACCTaGGGCTCCTGGGTGCCTAAC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTEHPPT*GSWVPN
Trigger: GTTAGGCACCCAGGAGCCCCAGGTCGGCGGGTGTTC...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTGGCTTGACACATGGTTaGACTACAGGCGACCAGATC +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTGLTHG*TTGDQI
Trigger: GATCTGGTCGCCTGTAGTCCAACCATGTGTCAAGCC...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACCTTAAGCCTGTGAGCTaGGTTCTGTCCAGCCTCCAC +
Preference number: 4 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNLKPVS*VLSSLH
Trigger: GTGGAGGCTGGACAGAACCCAGCTCACAGGCTTAAG...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTCCACGAGAACTGGCTaGACTGCCAGGGACTCCTCC +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLSTRTG*TARDSS
Trigger: GGAGGAGTCCCTGGCAGTCCAGCCAGTTCTCGTGGA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGGATCCCTTCCTCCGCTaGGCCTCCAGTTGCAATGGC +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLDPFLR*ASSCNG
Trigger: GCCATTGCAACTGGAGGCCCAGCGGAGGAAGGGATC...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCGATCAGCACTTCAGATaGGCCCTGAAGCCCCGATGC +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGDQHFR*ALKPRC
Trigger: GCATCGGGGCTTCAGGGCCCATCTGAAGTGCTGATC...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGCGCTCTGCAGAGTACTaGGTCAGAAGGCAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWRSAEY*VRRQEV
Trigger: CACCTCCTGCCTTCTGACCCAGTACTCTGCAGAGCG...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp AGCACTTGCCTGAGCCCTGGCTTCTACGACAGCTGCTaGCAGGTGTTCCACCTGGGCTGTCAGGTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: STCLSPGFYDSC*QVFHLGCQVLL
Trigger: AAGGAGAACCTGACAGCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR TCA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCCCAGCTGCCCCTTGGTaGCCTCTATCACAGAATTTT +
Preference number: 4 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEAPAAPW*PLSQNF
Trigger: AAAATTCTGTGATAGAGGTCACCAAGGGGCAGCTGG...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCCCTCCTGCAGACTGCTaGCACTGGCCTTGGTCTGCG +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSPPADC*HWPWSA
Trigger: CGCAGACCAAGGCCAGTGTCAGCAGTCTGCAGGAGG...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTTGCCTCATTCCCAGGTaGGTTGGGGTCCTCCCCAGG +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFCLIPR*VGVLPR
Trigger: CCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCA...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGAGCACAGTCTACACTTaGACTGAAGGCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWSTVYT*TEGQPC
Trigger: GCAGGGCTGGCCTTCAGTTCAAGTGTAGACTGTGCT...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCACATTGCCCAGCCTCTaGCGACTCTTGTCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGTLPSL*RLLSPP
Trigger: AGGAGGGGACAAGAGTCGTCAGAGGCTGGGCAATGT...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGTGGAGTGCAGTGGTATaGTCTCGGCTCACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGWSAVV*SRLTAA
Trigger: GGCTGCAGTGAGCCGAGATCATACCACTGCACTCCA...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTTCTCTGCCATCTGCTaGTGTAGTGCCAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGFSAIC*CSASTC
Trigger: GCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAA...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTCACCAGCTTCGGTACTaGAGCACCTTGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAAHQLRY*STLACS
Trigger: GCTGCAGGCCAAGGTGCTGCAGTACCGAAGCTGGTG...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAAACTCCTGCTCCATCTaGCACTGGCTCTCCTTCCTC +
Preference number: 4 (lower is better)
Translates to: STCKAFLACSAASILLHTNSCSI*HWLSFL
Trigger: GAGGAAGGAGAGCCAGTGGCAGATGGAGCAGGAGTT...TGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGGTCCACAGTCTGCCCTaGCAGAGTGTCCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQVHSLP*QSVPLP
Trigger: GGGGAGCGGGACACTCTGGCAGGGCAGACTGTGGAC...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGTGCCCTAGCCAGCGCTaGGGTCACTTCCGTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLCPSQR*GHFRLL
Trigger: GAGCAAACGGAAGTGACCGCAGCGCTGGCTAGGGCA...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCCTGCGGCCTCCATTCTaGTGCACACAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSLRPPF*CTQTGS
Trigger: AGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAG...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGGCCAGCTCCTGCTGGTaGCAGGAGCGCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQASSCW*QERSFS
Trigger: GGAGAAGGAGCGCTCCTGGCACCAGCAGGAGCTGGC...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGAGCTCCTTCTGCGTCTaGAGCAGTGTCTCCAGGAGG +
Preference number: 4 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLSSFCV*SSVSRR
Trigger: CCTCCTGGAGACACTGCTGCAGACGCAGAAGGAGCT...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTGGGCCACCTTCAGTTCGGCTTCTACGACAGCTaGTTGCAGGTGTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: GQEGQILLQSLPLGHLQFGFYDS*LQVFHL
Trigger: CAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCC...GAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACATGCACAGTCAGCTTCTaGTCTCGCTCCTGGACGGCC +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTCTVSF*SRSWTA
Trigger: GGCCGTCCAGGAGCGAGAGCAGAAGCTGACTGTGCA...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGTCACCTACCTTCCTGTaGAGGCCCTGGAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRSPTFL*RPWSCC
Trigger: GCAGCAGCTCCAGGGCCTGCACAGGAAGGTAGGTGA...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGACCGCCGTCCCTCCACTaGCAGCTCTTCCTCCAGCCT +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGPPSLH*QLFLQP
Trigger: AGGCTGGAGGAAGAGCTGGCAGTGGAGGGACGGCGG...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCTGGTCTCCACCTCATaGTCCTGTGCCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGLVSTS*SCACSA
Trigger: TGCTGAGCAGGCACAGGAGCATGAGGTGGAGACCAG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCTTGCAGGGTTGCAGTaGTGGCCTCCAGACTGCGGC +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFLAGLQ*WPPDCG
Trigger: GCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAG...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTAGTGCCTGCTGCAGCTaGTGCACATCCTCCTGGTAT +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSACCS*CTSSWY
Trigger: ATACCAGGAGGATGTGCAGCAGCTGCAGCAGGCACT...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATCAGCCTGCGGGTCTCTaGCTCCAGGACAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHQPAGL*LQDSGL
Trigger: GAGGCCACTGTCCTGGAGGCAGAGACCCGCAGGCTG...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTGGTACTGCAGCACCTTaGCCTGCAGCTTCCTCACAA +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPGTAAP*PAASSQ
Trigger: TTGTGAGGAAGCTGCAGGCCAAGGTGCTGCAGTACC...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGGATTGGTCCTCCAGTaGCTTCTAGCCGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: STCKAFLACSAASILLHTGLVLQ*LLAASP
Trigger: TGGAGAAGCGGCTAGAAGCCACTGGAGGACCAATCC...TGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp TCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGATGTGCAGTCGAAGCTaGGTGTTCACCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: SARSTCKAFLACSAASILMCSRS*VFTSAR
Trigger: TCTAGCAGAGGTGAACACCCAGCTTCGACTGCACAT...CAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp TGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTTCATTTCCAGGAAGTaGCGTCGGAATGTCACAACC +
Preference number: 4 (lower is better)
Translates to: CLRQVDLQSISRLLCGLHFISRK*RRNVTT
Trigger: GGTTGTGACATTCCGACGCCACTTCCTGGAAATGAA...ATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp AGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGAGTAGCAGCAGCAGCTaGGCCGGCTCCCGCCCATCC +
Preference number: 4 (lower is better)
Translates to: SCWFSPTLSNAKASFKALSSSSS*AGSRPS
Trigger: GGATGGGCGGGAGCCGGCCCAGCTGCTGCTGCTACT...CAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGTCGCAGCTGTAGTTaGGCTGCCTTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGSRSCS*AALASW
Trigger: CCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCTGTCAGGTTCTCCTTaGCTGCCTGAAGTAACTCTC +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTLSGSP*LPEVTL
Trigger: GAGAGTTACTTCAGGCAGCCAAGGAGAACCTGACAG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGTGCTCTTGCAGAGCCTaGGCTCTCTCACGCTCACTC +
Preference number: 4 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLCSCRA*ALSRSL
Trigger: GAGTGAGCGTGAGAGAGCCCAGGCTCTGCAAGAGCA...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCGTCAAAGCCACTCTCTaGGTTTCCCTCTGGCCCTCC +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSVKATL*VSLWPS
Trigger: GGAGGGCCAGAGGGAAACCCAGAGAGTGGCTTTGAC...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTCCAGGTCATGGATCTaGCTGCTTTGTGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGSRSWI*LLCACS
Trigger: GCTGCAGGCACAAAGCAGCCAGATCCATGACCTGGA...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTGCCAGAACGGTGCTGTaGCTCTCCAGGTCATGGATC +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPARTVL*LSRSWI
Trigger: GATCCATGACCTGGAGAGCCACAGCACCGTTCTGGC...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGCAGGGTTGCAGTGCTaGCCTCCAGACTGCGGCTCA +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFAGLQC*PPDCGS
Trigger: TGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTCTAGGGACCCTGCCTaGGCCGCACGCATGGCCTCC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGSRDPA*AARMAS
Trigger: GGAGGCCATGCGTGCGGCCCAGGCAGGGTCCCTAGA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACGTGTGCTCCTGGCTGTaGCTGCTACCTGGAGGCGGC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDVCSWL*LLPGGG
Trigger: GCCGCCTCCAGGTAGCAGCCACAGCCAGGAGCACAC...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCGCTCTGAATATCTGGTaGGGAGGGGAGACCCTAGGC +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGALNIW*GGETLG
Trigger: GCCTAGGGTCTCCCCTCCCCACCAGATATTCAGAGC...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTTCCTGCATGTTCTGGTaGCCAATTGCACCTTCCTCA +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTSCMFW*PIAPSS
Trigger: TGAGGAAGGTGCAATTGGCCACCAGAACATGCAGGA...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTAGGCGGTATGACCAGTaGGGGCCCCAGACCTGGCGC +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEARRYDQ*GPQTWR
Trigger: GCGCCAGGTCTGGGGCCCCCACTGGTCATACCGCCT...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTaGTGGCTGGGGTTTCCCACCCCACAGGTACTTCTA +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLL*WLGFPTPQVLL
Trigger: TAGAAGTACCTGTGGGGTGGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp GGCCTTCAAGCCCTCTCTTTGTCCAAGATGCTCTGTTaGACTCTCCCTGGCCTCACTGAGAGCAGCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GLQALSLSKMLC*TLPGLTESSQW
Trigger: CCACTGGCTGCTCTCAGTGAGGCCAGGGAGAGTCAAACAGAGCATCTTGGACAAAGAGAGGGCTTGAAGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCGGTCAACAGAGACCCTaGAAGCCTCACATGCTCAGC +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGGQQRP*KPHMLS
Trigger: GCTGAGCATGTGAGGCTTTCAGGGTCTCTGTTGACC...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTACTTCAGCAGGGTCCTaGAGAATGGGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPTSAGS*RMGAPE
Trigger: CTCTGGAGCTCCCATTCTTCAGGACCCTGCTGAAGT...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTGTCCCGCTCCCCAGTaGGCTTCTGCAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGCPAPQ*ASAAAV
Trigger: GACAGCGGCTGCAGAAGCTCACTGGGGAGCGGGACA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACTGGCACTCCATCTTGTaGTGGTTTTCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNWHSIL*WFSSSS
Trigger: GGAACTGGAGGAAAACCATCACAAGATGGAGTGCCA...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTCTCTCAAGGACAGCTTaGTCTGTTCCAGGTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPLSRTA*SVPGPP
Trigger: AGGAGGACCTGGAACAGATCAAGCTGTCCTTGAGAG...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCAAGCCGTGGCCTTGCTaGTCTCTAGGGACCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFKPWPC*SLGTLP
Trigger: AGGCAGGGTCCCTAGAGATCAGCAAGGCCACGGCTT...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACAATCCTGCTGTGTGGGTaGAGAAGCCGTGGCCTTGCT +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTILLCG*RSRGLA
Trigger: AGCAAGGCCACGGCTTCTTCACCCACACAGCAGGAT...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGGGCAGGAGAATTGCTTaGACCCAGGAGGTGGATGTT +
Preference number: 4 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWGRRIA*TQEVDV
Trigger: AACATCCACCTCCTGGGTTCAAGCAATTCTCCTGCC...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGCTGCATCCTCTTCTTaGTCCCTTCCTCCGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFAASSS*SLPPLG
Trigger: GCCCAGCGGAGGAAGGGATCAAGAAGAGGATGCAGC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATCAGTGCCCGGTGTCTaGGTCAGCATGCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISVPGV*VSMPLA
Trigger: GGCAAGTGGCATGCTGACTCAGACACCGGGCACTGA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTGGCACCCTTGAGGACTaGATAGGTCCAGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFGTLED*IGPEGG
Trigger: GCCTCCCTCTGGACCTATTCAGTCCTCAAGGGTGCC...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp GCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTTCTCTGCCATCTGCTaGTGTAGTGCCAGCACCTGC +
Preference number: 4 (lower is better)
Translates to: ASILLHTDWFSSSNWRSCFSAIC*CSASTC
Trigger: GCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAA...GCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGCTTCCGCCAGGAGGCTaGCTGATTCTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLLPPGG*LILCHL
Trigger: CAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAG...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTCTTCCGCCAGGAGGCTaGCTGATTCTCTGCCATCTG +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAALPPGG*LILCHL
Trigger: CAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAG...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTTCAGCTTTTTCCATGTaGAGTCGAAGCTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: RQVDLQSISRLLCGLHSASAFSM*SRSWVF
Trigger: GAACACCCAGCTTCGACTGCACATGGAAAAAGCTGA...AGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCAAAGCATTTCTCGCCTaGTCTGCGGCCTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSKAFLA*SAASIL
Trigger: CAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTT...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTCACGCTCCACGGCCTaGAGCCGCACCTCTAGAGCC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGSRSTA*SRTSRA
Trigger: GGCTCTAGAGGTGCGGCTGCAGGCCGTGGAGCGTGA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCCCTGCAGCAGGGAGCTaGTCTCTTCTTGGAGGGCAG +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFPAAGS*SLLGGQ
Trigger: CTGCCCTCCAAGAAGAGAGCAGCTCCCTGCTGCAGG...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTTGGTTCCCGGGCTGCTaGTCTGCGGCCAGCGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILWFPGC*SAASAS
Trigger: AGAAGCGCTGGCCGCAGAGCAGCAGCCCGGGAACCA...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCTCCAAAGCAGCCTTCTaGATTTCCCGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPSKAAF*ISRCFS
Trigger: GGAGAAGCAACGGGAAATGCAGAAGGCTGCTTTGGA...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCCCTTGGGTCCAAAGCAGCCTTCTaGATTTCCCGTTGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: QLGSGSGGPNSLAEPSLGSKAAF*ISRCFS
Trigger: GGAGAAGCAACGGGAAATGCAGAAGGCTGCTTTGGA...CCCAAGGGAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTCCTGCAGTTGCTGCTaGAGGACCACTATTTCCTGC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSCSCC*RTTISC
Trigger: GCAGGAAATAGTGGTCCTGCAGCAGCAACTGCAGGA...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTCCGTTCCTTGAGCACTaGCTGGGCCTGCAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPPFLEH*LGLQPA
Trigger: AGCTGGCTGCAGGCCCAGGCAGTGCTCAAGGAACGG...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGGCCTGCTCGAGGAGATaGTGCTCTTTCCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKACSRR*CSFPCR
Trigger: CCTGCAGGGGAAAGAGCAGCATCTCCTCGAGCAGGC...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGCGGCTCAATTCTGCCTaGTCGAGGAGATGCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLRLNSA*SRRCCS
Trigger: AGAGCAGCATCTCCTCGAGCAGGCAGAATTGAGCCG...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACGCATCCAGGGAGGCTTaGAGGGTTGCAGTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDASREA*RVAVLA
Trigger: GGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGC...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGCCTGCTGCAGCTGCTaGACATCCTCCTGGTATCGG +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFACCSC*TSSWYR
Trigger: CCGATACCAGGAGGATGTGCAGCAGCTGCAGCAGGC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTCATCCTGCAGCCTTTaGTGTTCTGAGTCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLSSCSL*CSESRS
Trigger: GGAGCGGGACTCAGAACAGCAAAGGCTGCAGGATGA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCCCAGCTGCACACCCTaGTCCCCTCTGGACCCCAGT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILPSCTP*SPLDPS
Trigger: ACTGGGGTCCAGAGGGGAGCAGGGTGTGCAGCTGGG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCCGGGCCACTGCTTGCTaGAGGTGTTCAAGCCTTTGT +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGRATAC*RCSSLC
Trigger: ACAAAGGCTTGAACACCTGCAGCAAGCAGTGGCCCG...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTCAAGGGCCAGTTCGTaGCTCCCTTCCTCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFSRASS*LPSSAP
Trigger: AGGGGCTGAGGAAGGGAGGCACGAACTGGCCCTTGA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTGAGAACTGGCTGGACTaGCAGGGACTCCTCCCGTCT +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSENWLD*QGLLPS
Trigger: AGACGGGAGGAGTCCCTGGCAGTCCAGCCAGTTCTC...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTACATTCAGTTTTTCTaGCTTCAGGGTGCTGGCAGT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQYIQFF*LQGAGS
Trigger: ACTGCCAGCACCCTGAAGGCAGAAAAACTGAATGTA...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACATGCCACTTGCCATGTaGTCTGCCCTGTGGGACAAG +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHMPLAM*SALWDK
Trigger: CTTGTCCCACAGGGCAGAGCACATGGCAAGTGGCAT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACTTGCTTTTCTCTCCCTaGCTCCAGCTTGACAACCCT +
Preference number: 4 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNLLFSP*LQLDNP
Trigger: AGGGTTGTCAAGCTGGAGGCAGGGAGAGAAAAGCAA...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGAGGTCCTGCACAGCCTaGCGTCTCCGAGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKRSCTA*RLRVST
Trigger: AGTGCTGACTCGGAGACGCCAGGCTGTGCAGGACCT...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTGAGTCCACCTCTCCCTaGAGGTCCACAGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSESTSP*RSTVCP
Trigger: AGGGCAGACTGTGGACCTCCAGGGAGAGGTGGACTC...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATAACTGGAGAAGCTGCTaGTTCAGCCCAACTTTATCT +
Preference number: 4 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYNWRSC*FSPTLS
Trigger: AGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTT...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGCCTTCTTGCTCAGCCTaGGCCAGCTGTCTGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWPSCSA*ASCLAA
Trigger: TGCAGCCAGACAGCTGGCCCAGGCTGAGCAAGAAGG...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTTTTGCCAGCTCCTGCTaGTGCCAGGAGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFFASSC*CQERSF
Trigger: GAAGGAGCGCTCCTGGCACCAGCAGGAGCTGGCAAA...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGAGGGCACTCTCTGCCTaGGTCCGTTCTTCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRRALSA*VRSSSL
Trigger: GAGGGAAGAAGAACGGACCCAGGCAGAGAGTGCCCT...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGCTCCTAGCTCCATTCTaGTCTGGCTCAAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLLLAPF*SGSRPQ
Trigger: CTGGGGCCTTGAGCCAGACCAGAATGGAGCTAGGAG...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTCCTGCAACTCTGTGTaGACCTGGCTCTTCTCAGCC +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLSCNSV*TWLFSA
Trigger: GGCTGAGAAGAGCCAGGTCCACACAGAGTTGCAGGA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTCACTTGCCTGAGCCCTaGCTTCTACGACAGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPHLPEP*LLRQLL
Trigger: AAGCAGCTGTCGTAGAAGCCAGGGCTCAGGCAAGTG...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGGCGCTGTGCTTTACTTaGGCCCTTCCCTTCCTCTGC +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLALCFT*ALPFLC
Trigger: GCAGAGGAAGGGAAGGGCCCAAGTAAAGCACAGCGC...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACAGCTGCTGCTCCAGCTaGTCTTTGAGCTCCTGGAGT +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHSCCSS*SLSSWS
Trigger: ACTCCAGGAGCTCAAAGACCAGCTGGAGCAGCAGCT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTAGGTTGTTCCTTTGCTaGGTCTCCCTCAGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPRLFLC*VSLSSR
Trigger: TCTGGAGCTGAGGGAGACCCAGCAAAGGAACAACCT...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCGCAGCTGGACATTGTaGCGCTGCAGCCTGCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWRSWTL*RCSLLL
Trigger: CAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCG...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTCATTCCCAGGTGAGTTaGGGTCCTCCCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSHSQVS*GPPQGC
Trigger: GCAACCCTGGGGAGGACCCCAACTCACCTGGGAATG...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTAGGAATTCCAGATTATaGTGGGAGTGCCAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTRNSRL*WECQRK
Trigger: CTTCCTCTGGCACTCCCACCATAATCTGGAATTCCT...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGGCATGTGTAGGTTTCTaGAACAAAGCTCTAGTCGCT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQACVGF*NKALVA
Trigger: AGCGACTAGAGCTTTGTTCCAGAAACCTACACATGC...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGAGGCAATCCTGCTACTaGGCAAGGAAAGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQRQSCY*ARKVYF
Trigger: AAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGCAGGAATCTGTCCCATaGGCTGAGATGAGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLQESVP*AEMRPA
Trigger: TGCAGGCCTCATCTCAGCCCATGGGACAGATTCCTG...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCAGGGCTCTCTTGGTTTaGAGCACACTGGCAGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGRALLV*STLAAL
Trigger: AAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCT...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTGTGGAGGGCTCTCTTaGTTTGGAGCACACTGGCAG +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLCGGLS*FGAHWQ
Trigger: CTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGCCTCCCGAGTAGCTaGGACTACAGGCACATCATC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGSLPSS*DYRHII
Trigger: GATGATGTGCCTGTAGTCCCAGCTACTCGGGAGGCT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp CCCTGCCACAGTCAGACCAGTCTTCTCACTGTGTGCTaGGCAACACCTCCAACCCCACTCCATCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PCHSQTSLLTVC*ATPPTPLHLSR
Trigger: CCTTGAAAGATGGAGTGGGGTTGGAGGTGTTGCCAAGCACACAGTGAGAAGACTGGTCTGACTGTGGCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTACTTCAGCAGGGTCCTaGAGAATGGGAGCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAATSAGS*RMGAPE
Trigger: CTCTGGAGCTCCCATTCTTCAGGACCCTGCTGAAGT...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCCTGGAGAAGGCGGCTaGGAAGCGATACTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFPGEGG*EAILQQ
Trigger: CTGCTGAAGTATCGCTTCTCAGCCGCCTTCTCCAGG...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTCCTGGGTTATATCCTTaGTCACCTGCTGTAAAGACA +
Preference number: 4 (lower is better)
Translates to: RQVDLQSISRLLCGLHSAPGLYP*SPAVKT
Trigger: TGTCTTTACAGCAGGTGATCAAGGATATAACCCAGG...AGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGTCTCCGAGTCAGCACTaGACGCACCAGAGTAAGAGC +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLSPSQH*THQSKS
Trigger: GCTCTTACTCTGGTGCGTTCAGTGCTGACTCGGAGA...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTATGTCCCGCTCCCCAGTaGGCTTCTGCAGCCGCTGTC +
Preference number: 4 (lower is better)
Translates to: TGEAAGSAQLYLTPKPHLCPAPQ*ASAAAV
Trigger: GACAGCGGCTGCAGAAGCTCACTGGGGAGCGGGACA...TAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTCCTGGGCCACCAGCTaGGACTTCAAGTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQSWATS*DFKSST
Trigger: GGTGGAGGACTTGAAGTCTCAGCTGGTGGCCCAGGA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCCCTGGTCCCGTTCCTTaGGCACTGCCTGGGCCTGCA +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIPGPVP*ALPGPA
Trigger: TGCAGGCCCAGGCAGTGCTCAAGGAACGGGACCAGG...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTCAGCCTTTGCTGTTCTaGGTCCCGCTCCAGGACAGA +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSQPLLF*VPLQDR
Trigger: TCTGTCCTGGAGCGGGACTCAGAACAGCAAAGGCTG...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGAGCAGCACCACTCTGTaGGCCCCAGTGCCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKSSTTL*APVPSY
Trigger: ATAGGAAGGCACTGGGGCTCACAGAGTGGTGCTGCT...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTGCAGGGTGGACAGCTaGAGGTATCATCTACCCCAA +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLCRVDS*RYHLPQ
Trigger: TTGGGGTAGATGATACCTTCAGCTGTCCACCCTGCA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTCAGTGCCCGGTGTCTaGGTCAGCATGCCACTTGCC +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPSVPGV*VSMPLA
Trigger: GGCAAGTGGCATGCTGACTCAGACACCGGGCACTGA...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTGGCACCCTTGAGGACTaGATAGGTCCAGAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPGTLED*IGPEGG
Trigger: GCCTCCCTCTGGACCTATTCAGTCCTCAAGGGTGCC...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCTGCCTCAGCCTCCTaGGTAGCTGGGACTACAAGG +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWPASAS*VAGTTR
Trigger: CCTTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTCGGTGCACAGCGAGTaGAAAAACCGAGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSSVHSE*KNREAN
Trigger: ATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGA...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTGCTGTCTCAAGGCTTTaGCCTCTTCCTCCCACTGAT +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPAVSRL*PLPPTD
Trigger: ATCAGTGGGAGGAAGAGGGCAAAGCCTTGAGACAGC...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGTCCCCAGTGAGCTTCTaGAGCCGCTGTCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWSPVSF*SRCLKA
Trigger: AGCCTTGAGACAGCGGCTGCAGAAGCTCACTGGGGA...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTGTCCACAGTCTGCCCTaGCAGAGTGTCCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NWRSCWFSPTLSNAKASFVHSLP*QSVPLP
Trigger: GGGGAGCGGGACACTCTGGCAGGGCAGACTGTGGAC...AAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCACTGAGCTTGACAGCTaGAGCCCGAAGATCAGCTAC +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSTELDS*SPKISY
Trigger: GTAGCTGATCTTCGGGCTGCAGCTGTCAAGCTCAGT...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCGCTGGCTCTCTGTGCTaGGCAGTCGCAGCTGTAGTT +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTAGSLC*AVAAVV
Trigger: AACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGC...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCCTCCTGCAGCTCTCTTaGCAGAACGGTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFLLQLS*QNGAVA
Trigger: AGCCACAGCACCGTTCTGGCAAGAGAGCTGCAGGAG...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGAGGATCAGCTTCATGTaGTCTAGGCTCCCGCGCTGT +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLRISFM*SRLPRC
Trigger: ACAGCGCGGGAGCCTAGAGCACATGAAGCTGATCCT...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGTGCAGGCCCTGGAGCTaGTGCTCCAGCTGGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWCRPWS*CSSWSL
Trigger: CAAAGACCAGCTGGAGCAGCAGCTCCAGGGCCTGCA...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCTCCTGTCCCTGGGCCTaGTGCTGTTCTTGCTGCAGA +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSSCPWA*CCSCCR
Trigger: TCTGCAGCAAGAACAGCAGCAGGCCCAGGGACAGGA...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTCACCTCATGCTCCTGTaGCTGCTCAGCACACTGCTG +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSHLMLL*LLSTLL
Trigger: CAGCAGTGTGCTGAGCAGGCACAGGAGCATGAGGTG...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATGCAGCCAGCTGTCCTaGAGGGCCCTGGTCTCCACC +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKCSQLS*RALVST
Trigger: GGTGGAGACCAGGGCCCTGCAGGACAGCTGGCTGCA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGGGAGGCTTGCAGGGTTaGAGTGCTGGCCTCCAGACT +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQGGLQG*SAGLQT
Trigger: AGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCC...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGACCCCAGTTCTGCTGTaGTGGTTGCACCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKTPVLL*WLHLGC
Trigger: ACAGCCCAGGTGCAACCAGCACAGCAGAACTGGGGT...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTCTGGACCCCAGTTCTaGTGTGCTGGTTGCACCTGG +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFSGPQF*CAGCTW
Trigger: CCAGGTGCAACCAGCACAGCAGAACTGGGGTCCAGA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACATGGACATTGTGGCGCTaGAGCCTGCTCCTGTCAATC +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTWTLWR*SLLLSI
Trigger: GATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCA...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTGGGACTCATCCAGCCTaGGGGTCTCTGCCTCCAGGA +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEAGTHPA*GSLPPG
Trigger: TCCTGGAGGCAGAGACCCGCAGGCTGGATGAGTCCC...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCCAGTTCCAGCTGATATaGCCAGGAAGCGACATCTCA +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGQFQLI*PGSDIS
Trigger: TGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGGGGACTCCTCCCGTCTaGTGGATTCACCATTCTGGT +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRGTPPV*WIHHSG
Trigger: ACCAGAATGGTGAATCCAGCAGACGGGAGGAGTCCC...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCGCATCTACAAAGCCTaGCTTCACCAGCATGGTGTG +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGRIYKA*LHQHGV
Trigger: CACACCATGCTGGTGAAGGCAGGCTTTGTAGATGCG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGACAACTGGGTCATTCTaGAAACTTTCATCTGTGTCC +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQTTGSF*KLSSVS
Trigger: GGACACAGATGAAAGTTTGCAGAATGACCCAGTTGT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCTCCATCACCCTTGATTaGCAAGCCTTCCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSSITLD*QAFPWQ
Trigger: CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CCA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCACCAGCTGCAGTGACTaGGGCTTCATGTTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: AASILLHTDWFSSSNWRSTSCSD*GFMLFN
Trigger: GTTGAACAACATGAAGCCCCAGTCACTGCAGCTGGT...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTGGTACTGCAGCACCTTaGCCTGCAGCTTCCTCACAA +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAAGTAAP*PAASSQ
Trigger: TTGTGAGGAAGCTGCAGGCCAAGGTGCTGCAGTACC...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGTTCTTCCAGATCCGTTaGGTTCCCGAGACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGFFQIR*VPETVL
Trigger: GAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAA...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGGTTTCCAGCTGCATCTaGCATAGGGCACTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLVSSCI*HRALSA
Trigger: GGCAGAGAGTGCCCTATGCCAGATGCAGCTGGAAAC...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGTCGTTCCAGTTGTTaGCTGGCATCTGCTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGSRSSC*LASASS
Trigger: GGAGCTAGCAGATGCCAGCCAACAACTGGAACGACT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTTGCTCCACCAGCCTCTaGGAGTCATCCTGGGCCACC +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEACSTSL*ESSWAT
Trigger: GGTGGCCCAGGATGACTCCCAGAGGCTGGTGGAGCA...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGCTGCCTTGGCTTCCTaGGCCCACAAGGAGGCTCGC +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPAALAS*AHKEAR
Trigger: GCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGC...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCTCTTCTCTTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAAGTCGCAGCTGTAGTTaGGCTGCCTTGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: SSSLSARVWVRRAKFSCRSRSCS*AALASW
Trigger: CCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACT...TCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAGAGAAGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCGGGCAGAGTAGAGGCTaGCCAGCTGGGCCTGGGCCT +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTGQSRG*PAGPGP
Trigger: AGGCCCAGGCCCAGCTGGCCAGCCTCTACTCTGCCC...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CATTTTTCAGCTTCAGTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCTCCTAGCTCCATTCTaGTCTGGCTCAAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: HFSASVLSEPFSGLLPGCLLAPF*SGSRPQ
Trigger: CTGGGGCCTTGAGCCAGACCAGAATGGAGCTAGGAG...GCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp GGATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGGGCTGTCAGGTTCTCCTTaGCTGCCTGAAGTAACTCTC +
Preference number: 4 (lower is better)
Translates to: GFVPAESPPPLLFQLGSGLSGSP*LPEVTL
Trigger: GAGAGTTACTTCAGGCAGCCAAGGAGAACCTGACAG...CCCAGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGTGCAGAGCCTTCCCTTaGGCCACCTTCAGTTCGCCC +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWCRAFP*ATFSSP
Trigger: GGGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCA...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCCTTTCAGCTAGGGTCTaGGTCAGGAGGGCCAAATTC +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGLSARV*VRRAKF
Trigger: GAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAG...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTTCTGCTCTCGCTCCTaGACGGCCATGGGCAGATGC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQFCSRS*TAMGRC
Trigger: GCATCTGCCCATGGCCGTCCAGGAGCGAGAGCAGAA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCCTCTGGGTTTCCCTCTaGCCCTCCAGCTCCTTGATC +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSLWVSL*PSSSLI
Trigger: GATCAAGGAGCTGGAGGGCCAGAGGGAAACCCAGAG...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTCAGCTGCCTCTGAGTaGTCAGCTCCCGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGSAASE*SAPGLA
Trigger: AGCGAGGCCGGGAGCTGACCACTCAGAGGCAGCTGA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCGGGACAGGAGGAGGCTaGTCTCACCTACCTTCCTGT +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTGTGGG*SHLPSC
Trigger: ACAGGAAGGTAGGTGAGACCAGCCTCCTCCTGTCCC...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCGCTCCCCTTGTTCCCTaGCTTCCTGCAGTTGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSAPLVP*LPAVAA
Trigger: AGCAGCAACTGCAGGAAGCCAGGGAACAAGGGGAGC...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGGAGGTTTTGTGGCTGTaGGGTAAGGCTTCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLEVLWL*GKASRL
Trigger: CAACCTGGAAGCCTTACCCCACAGCCACAAAACCTC...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACGCTCCCGCTGCAGCCTaGGCTCTAAAGAATCAAGTT +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHAPAAA*ALKNQV
Trigger: AACTTGATTCTTTAGAGCCCAGGCTGCAGCGGGAGC...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTCCCATCCTGCTGTGTaGGTGAAGAAGCCGTGGCCT +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTSHPAV*VKKPWP
Trigger: AGGCCACGGCTTCTTCACCCACACAGCAGGATGGGA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACATGTCTTTCAGCTGCTaGAACCTCTCTGAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHMSFSC*NLSEAQ
Trigger: CTGGGCCTCAGAGAGGTTCCAGCAGCTGAAAGACAT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGAATAAAGACCCTGCTTaGCAGCCTCTAAGATGTCTT +
Preference number: 4 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQNKDPA*QPLRCL
Trigger: AAGACATCTTAGAGGCTGCCAAGCAGGGTCTTTATT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTGTGGATGCTCGGTCCTaGGCTCTGGGCTGCATCCTC +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEAVDARS*ALGCIL
Trigger: GAGGATGCAGCCCAGAGCCCAGGACCGAGCATCCAC...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATCTCTGCCACCCAGGCTaGAGTGCAGTGACGCGATCT +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHLCHPG*SAVTRS
Trigger: AGATCGCGTCACTGCACTCCAGCCTGGGTGGCAGAG...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp TCCCATGTGGGAAGCAGAGCAGCAAAGGTCCTTGGGTaGGGAGGTGATGGTCACTGCTCTAACACACAAAGC +
Preference number: 4 (lower is better)
Translates to: SHVGSRAAKVLG*GGDGHCSNTQS
Trigger: GCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCTTTGCTGCTCTGCTTCCCACATGGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACCTTTCAGGTAGCCCTTaGAGAACTCCTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHLSGSP*RTPAPS
Trigger: AGATGGAGCAGGAGTTCTTCAAGGGCTACCTGAAAG...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTATTCTCCAGATCCCCTTaGCTCTTCAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: SPALRPPFCCTQTGSPPLFSRSP*LFSCIN
Trigger: GTTAATACAGCTGAAGAGTCAAGGGGATCTGGAGAA...TAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTCGGTCACCCGGTCCTaGAGTTCAGCCTTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQSVTRS*SSAFSR
Trigger: TCTGGAGAAGGCTGAACTTCAGGACCGGGTGACCGA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCAGCTCTCGCTCCTTGCTaGGAGAGTCCACCTCTCCCT +
Preference number: 4 (lower is better)
Translates to: SNWRSCWFSPTLSNAKASALAPC*ESPPLP
Trigger: AGGGAGAGGTGGACTCTCTCAGCAAGGAGCGAGAGC...TGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGAGTCCCCCTGCAGCTaGAGCTCCACATTTACCCTT +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFESPCS*SSTFTL
Trigger: AAGGGTAAATGTGGAGCTTCAGCTGCAGGGGGACTC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCCCTTCCAGGTGACTTaGCTCCAGGGCTTCCCGAAG +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILPFQVT*LQGFPK
Trigger: CTTCGGGAAGCCCTGGAGTCAAGTCACCTGGAAGGG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGCTCTCCAGCTCCTTCTaGATTCGGTTATACTCCTGG +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLLSSSF*IRLYSW
Trigger: CCAGGAGTATAACCGAATTCAGAAGGAGCTGGAGAG...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATTCTCCTTGGCTGCCTaGAGTAACTCTCGCTCACCC +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIFSLAA*SNSRSP
Trigger: GGGTGAGCGAGAGTTACTTCAGGCAGCCAAGGAGAA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTCCAAGACGTTCCTCTaGGTCTCCCGATCCTTCTCG +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFSKTFL*VSRSFS
Trigger: CGAGAAGGATCGGGAGACTCAGAGGAACGTCTTGGA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGTCTGTGCTGAGCGGGTaGTGTAGTCCTGCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKSVLSG*CSPASA
Trigger: AGCAGAAGCAGGACTACATCACCCGCTCAGCACAGA...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGGGGATGTCAGACTTTaGGTCAGGGACTCATCCAGC +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFGDVRL*VRDSSS
Trigger: GCTGGATGAGTCCCTGACTCAAAGTCTGACATCCCC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTAGGCACCCCTCTGGGTaGTTCCATAGGGAGCAAGCA +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPRHPSG*FHREQA
Trigger: TGCTTGCTCCCTATGGAATCACCCAGAGGGGTGCCT...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTGCTGGAACCTCTCTaGGGCCCAGAAGGTATGTGG +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDLLEPL*GPEGMW
Trigger: CCACATACCTTCTGGGCCTCAGAGAGGTTCCAGCAG...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCCTTTGGTGTCAACATTaGTCTTGCCCTCCCTGTGCA +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGLWCQH*SCPPCA
Trigger: TGCACAGGGAGGGCAAGATCAATGTTGACACCAAAG...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACATGTGTCTGCCTGGTTTaGTCAGCACTTCAGATGGGC +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTCVCLV*SALQMG
Trigger: GCCCATCTGAAGTGCTGATCAAACCAGGCAGACACA...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTCCTGGCCAGCAATCTaGCCTGCAGGGCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQSWPAI*PAGLEC
Trigger: ACATTCCAGCCCTGCAGGTCAGATTGCTGGCCAGGA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTATCTCCATCACCCTTaGTTGCCAAGCCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPYLHHP*LPSLPL
Trigger: CAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATA...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCAGGGTCTCTAACCATTaGCATGCCACTTCAACCTCC +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSRVSNH*HATSTS
Trigger: GGAGGTTGAAGTGGCATGGCAATGGTTAGAGACCCT...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTCAGCTTTTTCCATGTaGAGTCGAAGCTGGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGSAFSM*SRSWVF
Trigger: GAACACCCAGCTTCGACTGCACATGGAAAAAGCTGA...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTTCCCCAGTGAGCTTCTaGAGCCGCTGTCTCAAGGCT +
Preference number: 4 (lower is better)
Translates to: PLTGEAAGSAQLYLTPKPSPVSF*SRCLKA
Trigger: AGCCTTGAGACAGCGGCTGCAGAAGCTCACTGGGGA...AGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp ACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTATGGAGGTCCACAGTCTaGCCTGCCAGAGTGTCCCGC +
Preference number: 4 (lower is better)
Translates to: TGEAAGSAQLYLTPKPHLWRSTV*PARVSR
Trigger: GCGGGACACTCTGGCAGGGCAGACTGTGGACCTCCA...TAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGATCTTCCCTGGCCTTCTaGAGCAGCTCTCGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGSSLAF*SSSRSL
Trigger: CAAGGAGCGAGAGCTGCTGCAGAAGGCCAGGGAAGA...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATCTAGCACCTCCAGCTaGTGCCGCAGCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: SNWRSCWFSPTLSNAKASSSTSS*CRSSSL
Trigger: CAGGGAAGAGCTGCGGCAGCAGCTGGAGGTGCTAGA...TGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATAAGCTCTGCAATTGACTaGTCTGCCCTAGCCAGCGCT +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISSAID*SALASA
Trigger: AGCGCTGGCTAGGGCAGAGCAGTCAATTGCAGAGCT...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGCGGCCTCCATTCTaGTGCACACAGACTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTLRPPF*CTQTGS
Trigger: AGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAG...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGAAAGCATTTCTCGCCTaGTCTGCGGCCTCCATTCTG +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRKAFLA*SAASIL
Trigger: CAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTT...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCCCTGAGATCTGCCTaGAGCTCAGCCCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLSLRSA*SSAPAS
Trigger: GGAGGCTGGGGCTGAGCTGCAGGCAGATCTCAGGGA...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTCTTTCTCATGGGCTaGCTTCTGCTGCTCCAAGGC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTLFLMG*LLLLQG
Trigger: GCCTTGGAGCAGCAGAAGGCAGCCCATGAGAAAGAG...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCATCCCAGTGGTCTCCTaGTCCTTTAATTTCTGGACT +
Preference number: 4 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPIPVVS*SFNFWT
Trigger: AGTCCAGAAATTAAAGGAGCAGGAGACCACTGGGAT...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGAGGGCAGATGCTACTaGCTCAGCGGAGAGAGCAGT +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGEGRCY*LSGESS
Trigger: ACTGCTCTCTCCGCTGAGGCAGTAGCATCTGCCCTC...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCTTGTGGAGGGCAGATaGTACTGCCTCAGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGLVEGR*YCLSGE
Trigger: CTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAG...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTAGTTCGCCCTGCTCTTaGAGAGCCTGGGCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPSSPCS*RAWALS
Trigger: TGAGAGAGCCCAGGCTCTGCAAGAGCAGGGCGAACT...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTTCGAGCTCTCTGATCTaGTCCCTCTGCACAGTCAGC +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFSSSLI*SLCTVS
Trigger: GCTGACTGTGCAGAGGGAGCAGATCAGAGAGCTCGA...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCGGTCATGGATCTGGCTaGTTTGTGCCTGCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSGHGSG*FVPAAP
Trigger: AGGAGCTGCAGGCACAAAGCAGCCAGATCCATGACC...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATGCCTGCTGCTGTTCTTaGTGCAGAGCCTCCAGTTCC +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHACCCS*CRASSS
Trigger: GGAACTGGAGGCTCTGCAGCAAGAACAGCAGCAGGC...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTGCTCGAGGAGATGCTaGTCTTTCCCCTGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDCSRRC*SFPCRA
Trigger: TGCCCTGCAGGGGAAAGAGCAGCATCTCCTCGAGCA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAAGAGCCTCCTCCAGCTaGCGACTGTGTGCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKRASSS*RLCAWQ
Trigger: CTGCCAGGCACACAGTCGGCAGCTGGAGGAGGCTCT...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGGACCACCTCTTTCTaGAGTTCAGCCACACACTTG +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGRTTSF*SSATHL
Trigger: CAAGTGTGTGGCTGAACTGCAGAAAGAGGTGGTCCT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGAGTCTTCTCACTGTGTaGTTGGCAACACCTCCAACC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGSLLTV*LATPPT
Trigger: GGTTGGAGGTGTTGCCAAGCACACAGTGAGAAGACT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTTTCTGCCTTCAGGGTaGTGGCAGTCCCATGTGGGA +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTFLPSG*WQSHVG
Trigger: TCCCACATGGGACTGCCAGCACCCTGAAGGCAGAAA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTCGCTGGGCCTCCAGTTaGAATGGCTCCAGCCTTTCC +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEARWASS*NGSSLS
Trigger: GGAAAGGCTGGAGCCATTGCAACTGGAGGCCCAGCG...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCTCATCCTCCCTTGCCTaGTTCTTAAGTGTGGTGAGC +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGSSSLA*FLSVVS
Trigger: GCTCACCACACTTAAGAAGCAGGCAAGGGAGGATGA...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCGCCAGCAATCTGACCTaGAGGGCTGGAATGTTCATA +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSASNLT*RAGMFI
Trigger: TATGAACATTCCAGCCCTGCAGGTCAGATTGCTGGC...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGGATAACACCTGCCATTaGTTCTGGATGTACCCCTGG +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLDNTCH*FWMYPW
Trigger: CCAGGGGTACATCCAGAAGCAATGGCAGGTGTTATC...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTACTTGCCATGTGCTCTaGCCTGTGGGACAAGAATGT +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPTCHVL*PVGQEC
Trigger: ACATTCTTGTCCCACAGGGCAGAGCACATGGCAAGT...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCAGGCAGGAGCTAAGGTaGTGGAAGGAGGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTRQELR*WKEVFC
Trigger: GCAGAACACCTCCTTCCAGCACCTTAGCTCCTGCCT...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGTTGCTTTTCTCTCCCTaGCTCCAGCTTGACAACCCT +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGLLFSP*LQLDNP
Trigger: AGGGTTGTCAAGCTGGAGGCAGGGAGAGAAAAGCAA...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTACTTGCCATGTGCTCTaGCCTCTTTCTGCAGTTCAG +
Preference number: 4 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPTCHVL*PLSAVQ
Trigger: CTGAACTGCAGAAAGAGGGCAGAGCACATGGCAAGT...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000621352.1
CDS-3UTR CCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGACATTTTCCCACCTCTaGGGGATTGGTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLTFSHL*GIGPPV
Trigger: CACTGGAGGACCAATCCCCCAGAGGTGGGAAAATGT...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCATGTGCAGTCGAAGCTaGGTGTTCACCTCTGCTAGA +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSMCSRS*VFTSAR
Trigger: TCTAGCAGAGGTGAACACCCAGCTTCGACTGCACAT...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTTCATTTCCAGGAAGTaGCGTCGGAATGTCACAACC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPFISRK*RRNVTT
Trigger: GGTTGTGACATTCCGACGCCACTTCCTGGAAATGAA...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTAGCTGTATTAACTCCTaGCTCCTTTCATGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSCINS*LLSWAS
Trigger: GGAAGCCCATGAAAGGAGCCAGGAGTTAATACAGCT...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTGAATGCAGCTGCGCCTaGAGAAGGCGGCTGAGAAGC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGECSCA*RRRLRS
Trigger: GCTTCTCAGCCGCCTTCTCCAGGCGCAGCTGCATTC...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCGTGATTCTGACTGTTTaGCTTCCAGGCCCATCAGCA +
Preference number: 4 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGVILTV*LPGPSA
Trigger: TGCTGATGGGCCTGGAAGCCAAACAGTCAGAATCAC...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATCCCTCTGGGCCTGGATaGCCTCCATTTCTGTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHPSGPG*PPFLSA
Trigger: AGCAGACAGAAATGGAGGCCATCCAGGCCCAGAGGG...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTCTTCCCTCTGGGCCTaGATGGCCTCCATTTCTGTC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTSSLWA*MASISV
Trigger: GACAGAAATGGAGGCCATCCAGGCCCAGAGGGAAGA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCGCCTCCTGCATGTCCTaGCGCAGGGCACTCAGCTCT +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIASCMS*RRALSS
Trigger: AGAGCTGAGTGCCCTGCGCCAGGACATGCAGGAGGC...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATCTTTCTGTTCTCCCTaGGCCTCCTGCATGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISFCSP*ASCMSW
Trigger: CCAGGACATGCAGGAGGCCCAGGGAGAACAGAAAGA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CATTTTTCAGCTTCAGTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCTGCAGGTGTTCCACCTaGGCTGTCAGGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: HFSASVLSEPFSGLLPGCCRCST*AVRFSL
Trigger: CAAGGAGAACCTGACAGCCCAGGTGGAACACCTGCA...GCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTTGTGCCTGCAGCTCCTaGCTCCTTTCTTCTAGGTCC +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSCACSS*LLSSRS
Trigger: GGACCTAGAAGAAAGGAGCCAGGAGCTGCAGGCACA...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGTGCTGCACATCCTCCTaGTATCGGAGATCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKCCTSS*YRRSWS
Trigger: GGACCAGGATCTCCGATACCAGGAGGATGTGCAGCA...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTGTTCAGCCACACACTTaGCATCTGAGTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPVQPHT*HLSSSV
Trigger: GACAGAAGAACTCAGATGCCAAGTGTGTGGCTGAAC...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCGAGTGTGAGAGGCTGTaGTGCAGGCCTGCTAGCTCA +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGECERL*CRPASS
Trigger: TGAGCTAGCAGGCCTGCACCACAGCCTCTCACACTC...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGTTTACTTCCTCTTCCTaGGAACACCCGCCGACCTGG +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWFTSSS*EHPPTW
Trigger: CCAGGTCGGCGGGTGTTCCCAGGAAGAGGAAGTAAA...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGGTGCCCAGAATCATGTaGAGGGCTCTCTTGGTTTGG +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRVPRIM*RALLVW
Trigger: CCAAACCAAGAGAGCCCTCCACATGATTCTGGGCAC...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCACATCACACAGCCTTaGCAGAGACTCATCTCTCCT +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGHITQP*QRLISP
Trigger: AGGAGAGATGAGTCTCTGCCAAGGCTGTGTGATGTG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTTTCTGGATGTACCCCTaGACTCCACACAACCCGTGC +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSFWMYP*TPHNPC
Trigger: GCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAA...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACAAGTTCACAGCCTCTTaGCAGCCTGCAAGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDKFTAS*QPASCC
Trigger: GCAGCAGCTTGCAGGCTGTCAAGAGGCTGTGAACTT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGACCCTCTTCCTCCCACTaGTCATGCTGCTGTTGCAAC +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGPSSSH*SCCCCN
Trigger: GTTGCAACAGCAGCATGATCAGTGGGAGGAAGAGGG...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTCTTCTTGGATGTCCCTaGGATCTGCCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPLLGCP*DLPAAQ
Trigger: CTGAGCTGCAGGCAGATCTCAGGGACATCCAAGAAG...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTTCCTTTTCCATCAGTaGGAGAGTCAGGCTGGCTTT +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLFLFHQ*ESQAGF
Trigger: AAAGCCAGCCTGACTCTCTCACTGATGGAAAAGGAA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTGCTGCTCCGTGATATaGGACGCCTCCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILICCSVI*DASSSS
Trigger: GGAGGAGCTGGAGGCGTCTCATATCACGGAGCAGCA...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTCCAGCAGCACTTGCCTaGGCCCTGGCTTCTACGACA +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCPAALA*ALASTT
Trigger: TGTCGTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGG...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTCGATCTGTTCTCGCTaGGACTTCACCTCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQSICSR*DFTSWS
Trigger: GGACCAGGAGGTGAAGTCTCAGCGAGAACAGATCGA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGCTCCTCTCGAGATCCTaGGTCAGATGCTCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWLLSRS*VRCSFC
Trigger: GCAGAAAGAGCATCTGACTCAGGATCTCGAGAGGAG...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCTGCATCAGCTGCCTCTaGGTGGTCAGCTCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTCISCL*VVSSRP
Trigger: AGGCCGGGAGCTGACCACTCAGAGGCAGCTGATGCA...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAACGGCTGGTCTGTGCTaGGCGGGTGATGTAGTCCTG +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPTAGLC*AGDVVL
Trigger: CAGGACTACATCACCCGCTCAGCACAGACCAGCCGT...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCCAGATAAACTCCCTTaGTGTGGTGCTGCCACCCAG +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGPDKLP*CGAATQ
Trigger: CTGGGTGGCAGCACCACATCAAGGGAGTTTATCTGG...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTGTGGTGAGCAGAGTTaGGCTTGCACTCCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDCGEQS*ACTPPQ
Trigger: CTGAGGAGGAGTGCAAGCTCAACTCTGCTCACCACA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTCCAAGCCCATCCACCTaGGCCAAGGTTCAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELPSPST*AKVQAL
Trigger: TAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGG...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGGGACACAGGACACATTaGATGCCACCTCTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLGHRTH*MPPLLL
Trigger: TAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCC...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAGGTTCACTGCAACCTTaGCCTCCCTGGGCTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKGSLQP*PPWAQV
Trigger: CACCTGAGCCCAGGGAGGTCAAGGTTGCAGTGAACC...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGCGACAGCTCTGCAATTaGCTGCTCTGCAGACGCTCC +
Preference number: 4 (lower is better)
Translates to: SCWFSPTLSNAKASFKALRQLCN*LLCRRS
Trigger: GGAGCGTCTGCAGAGCAGTCAATTGCAGAGCTGTCG...CAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGAGCTCAATCCCTCTCTaGTGGTTGGAGGCACAGATC +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWSSIPL*WLEAQI
Trigger: GATCTGTGCCTCCAACCAGCAGAGAGGGATTGAGCT...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCTCTCACACCTCTGTTaGTCCTCCTCCAATCGGACC +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWLSHLC*SSSNRT
Trigger: GGTCCGATTGGAGGAGGAGCAACAGAGGTGTGAGAG...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAGGGTTCCCGAGACTGTaGTCCCACAGTCAAGCGCAG +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKGFPRL*SHSQAQ
Trigger: CTGCGCTTGACTGTGGGAGCACAGTCTCGGGAACCC...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTGGGAAAGTAACTCGGTaGACAGCGAGTGCAAAAACC +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAAGKVTR*TASAKT
Trigger: GGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCC...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTAGTAAGAGCCTTGTCTaGATCCTGGTAATCAAACTG +
Preference number: 4 (lower is better)
Translates to: FSPALRPPFCCTQTGSPPSKSLV*ILVIKL
Trigger: CAGTTTGATTACCAGGATGCAGACAAGGCTCTTACT...AGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTTGCTGCCTTAGGTCCTaGACAGCCTGGCGTCTCCGA +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELCCLRS*TAWRLR
Trigger: TCGGAGACGCCAGGCTGTGCAGGACCTAAGGCAGCA...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATCTAGCACCTCCAGCTaGTGCCGCAGCTCTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKSSTSS*CRSSSL
Trigger: CAGGGAAGAGCTGCGGCAGCAGCTGGAGGTGCTAGA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGGGCTTCAAACAGACTaGTCTCCAGTAGCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFGLQTD*SPVAPW
Trigger: CCAAGGAGCTACTGGAGAGCAGTCTGTTTGAAGCCC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTATCCCGCTCCTGCTCTaGCTGACTCCGTTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEAIPLLL*LTPFSV
Trigger: GACACTGAACGGAGTCAGGCAGAGCAGGAGCGGGAT...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCGCTCTCCAGAGCCTTTaGCAGCTCCTGCTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIALQSL*QLLLVP
Trigger: TGGCACCAGCAGGAGCTGGCAAAGGCTCTGGAGAGC...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTGGACTTTCATGTCCTaGCTCAGTCGTTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLWTFMS*LSRSSC
Trigger: ACAACTGGAACGACTGAGGCAGGACATGAAAGTCCA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTCTAGCTGGCTCTCTGTaGTGCGCAGTCGCAGCTGTA +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEALAGSL*CAVAAV
Trigger: TACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAG...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGTAACTCTCGCTCACCCTGGGCTTCCATTCGCTGTAGCTCTGCTCTCCGCAGGGATTCTAGGGAGTTCTaGTTTCCTTCCCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: SNSRSPWASIRCSSALRRDSREF*FPSHLD
Trigger: ATCTAAGTGGGAAGGAAAGCAGAACTCCCTAGAATC...CCTGCGGAGAGCAGAGCTACAGCGAATGGAAGCCCAGGGTGAGCGAGAGTTACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTCTTGCCAGAACGGTaGTGTGGCTCTCCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQLLPER*CGSPGH
Trigger: ATGACCTGGAGAGCCACAGCACCGTTCTGGCAAGAG...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTCCTGGTCCCTCTCCTaGAGCTCTCTTGCCAGAACG +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGSWSLS*SSLART
Trigger: CGTTCTGGCAAGAGAGCTGCAGGAGAGGGACCAGGA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTCATGCTCCTGTGCCTaGTCAGCACACTGCTGCTGG +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGSCSCA*SAHCCW
Trigger: CCAGCAGCAGTGTGCTGAGCAGGCACAGGAGCATGA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACAACATGGCTACCTCCTaGAGACTGCTGACACTGGCC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDNMATS*RLLTLA
Trigger: GGCCAGTGTCAGCAGTCTGCAGGAGGTAGCCATGTT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCCTCCAGCCGGGCCACTaGTTGCTGCAGGTGTTCAAG +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILILQPGH*LLQVFK
Trigger: CTTGAACACCTGCAGCAAGCAGTGGCCCGGCTGGAG...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTAGGAAGGTAATGGCCTaGTTCTTTAAGGAAAACTGT +
Preference number: 4 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTRKVMA*FFKENC
Trigger: ACAGTTTTCCTTAAAGAAGCAGGCCATTACCTTCCT...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGAGACCTAGTGTGGACTaGAATGGTTTTATCAGGCGG +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLRPSVD*NGFIRR
Trigger: CCGCCTGATAAAACCATTGCAGTCCACACTAGGTCT...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTCCTGGGCTCTGGGCTaGATCCTCTTCTTGATCCCT +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPSWALG*ILFLIP
Trigger: AGGGATCAAGAAGAGGATGCAGCCCAGAGCCCAGGA...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGAGGACCCCATGTTTTTaGCCTTCATCCTCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKRTPCF*PSSSLA
Trigger: GGCAAGGGAGGATGAAGGGCAAAAACATGGGGTCCT...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATGTCCAGGTTCTGTGTaGCTAGAGGTGAGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYICPGSV*LEVSSF
Trigger: GAAGGAGCTCACCTCTAGGCACACAGAACCTGGACA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGCCAGTGGGTCTCTTCTaGACAACTGGGTCATTCTGC +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKPVGLF*TTGSFC
Trigger: GCAGAATGACCCAGTTGTGCAGAAGAGACCCACTGG...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTCCCACTTTTCTCAGTaGCCGGTGTCTGAGTCAGCA +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFSHFSQ*PVSESA
Trigger: TGCTGACTCAGACACCGGGCACTGAGAAAAGTGGGA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTGCTACCCCCTTGGCTaGTCAACTACCACACACAAC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTCYPLG*STTTHN
Trigger: GTTGTGTGTGGTAGTTGAGCAGCCAAGGGGGTAGCA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCACAGGGTCCTGAAGAATaGGAGCTCCAGAGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: SNWRSCWFSPTLSNAKASQGPEE*ELQSRV
Trigger: CACCCGACTCTGGAGCTCCCATTCTTCAGGACCCTG...TGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTCTTCCACCATGACCTaGGTTATATCCTTGATCACC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPSSTMT*VISLIT
Trigger: GGTGATCAAGGATATAACCCAGGTCATGGTGGAAGA...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGAACTCTGTGTGGACCTaGCTCTTCTCAGCCTCAGTA +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRNSVWT*LFSASV
Trigger: TACTGAGGCTGAGAAGAGCCAGGTCCACACAGAGTT...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTGCAGGTGTTCCACCTaGGCTGTCAGGTTCTCCTTG +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDCRCST*AVRFSL
Trigger: CAAGGAGAACCTGACAGCCCAGGTGGAACACCTGCA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTAAGGTACTCCGCAGCTaGACATTGTGGCGCTGCAGC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGKVLRS*TLWRCS
Trigger: GCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTT...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATACCCCTCCCAGATTCTTaGCTAGGTCTCAGTTCCATC +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIPLPDS*LGLSSI
Trigger: GATGGAACTGAGACCTAGCCAAGAATCTGGGAGGGG...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCCTGCTCTGAATATCTaGTGGGGAGGGGAGACCCTA +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGPALNI*WGGETL
Trigger: TAGGGTCTCCCCTCCCCACCAGATATTCAGAGCAGG...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTCCTCCAGACCTAGTGTaGACTGCAATGGTTTTATCA +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPPPDLV*TAMVLS
Trigger: TGATAAAACCATTGCAGTCCACACTAGGTCTGGAGG...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGAACACCCACATGCTGTaGGTGTCGAAGCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWNTHML*VSKPPD
Trigger: GTCTGGAGGCTTCGACACCCACAGCATGTGGGTGTT...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGGACCCTGGGCTGAACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTGCTTTAAGAATAACGTaGACAACAGAACTCCCCTGC +
Preference number: 4 (lower is better)
Translates to: AGPWAEHQDEGLYWASTPALRIT*TTELPC
Trigger: GCAGGGGAGTTCTGTTGTCCACGTTATTCTTAAAGC...AGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTTCAGCCCAGGGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGTCTTCATTTTGCTTCTaGGACTGGGTCAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLSSFCF*DWVNRA
Trigger: TGCTCTGTTGACCCAGTCTCAGAAGCAAAATGAAGA...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACATCCATTAATTCTGTGTaGTTTGTCTCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: STCKAFLACSAASILLHTSINSV*FVSRIS
Trigger: GGAGATCCTGGAGACAAATCACACAGAATTAATGGA...TGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp AGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGCCCTCTTCCTCCCACTaGTCATGCTGCTGTTGCAAC +
Preference number: 4 (lower is better)
Translates to: SCWFSPTLSNAKASFKALPSSSH*SCCCCN
Trigger: GTTGCAACAGCAGCATGATCAGTGGGAGGAAGAGGG...CAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTTCCAGTTTCTGGACCTaGTCCCTCAGAACATCCCGG +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEASSFWT*SLRTSR
Trigger: CCGGGATGTTCTGAGGGATCAGGTCCAGAAACTGGA...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTGGATATGCTCCTGCTaGCATTCCACCTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQWICSC*HSTSFS
Trigger: GGAGAAGGAGGTGGAATGTCAGCAGGAGCATATCCA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCCGCTCCAAAGTCAGCTaGGCTTGCAGCAGGACCACC +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTRSKVS*ACSRTT
Trigger: GGTGGTCCTGCTGCAAGCTCAGCTGACTTTGGAGCG...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGGGCTGCAGTAAGATGTaGTTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWGCSKM*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCACATCTTACTGCAGCC...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCCACAAGCTCGAGTGTaGGGGCAAGAGCACAGTCTA +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGPQARV*GQEHSL
Trigger: TAGACTGTGCTCTTGCCCTCACACTCGAGCTTGTGG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTACTTCAGATGGGCCCTaGAGCCCCGATGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCTSDGP*SPDATG
Trigger: TCCAGTTGCATCGGGGCTTCAGGGCCCATCTGAAGT...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCCAAAGGCTCCAGCATaGATCATCAAACCACATACA +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGPKAPA*IIKPHT
Trigger: TGTATGTGGTTTGATGATTCATGCTGGAGCCTTTGG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCCAAGATGCTCTGTTTaGCTCTCCCTGGCCTCACTG +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILPRCSV*LSLASL
Trigger: CAGTGAGGCCAGGGAGAGTCAAACAGAGCATCTTGG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCTGCATCCAACTGGCTTaGCACTTTGAAAGGGCCTTC +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSCIQLA*HFERAF
Trigger: GAAGGCCCTTTCAAAGTGTCAAGCCAGTTGGATGCA...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATGTTCTGCGGACGGTTaGGGAAGGGATGGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLCSADG*GRDGGQ
Trigger: TTGGCCTCCATCCCTTCCTCAACCGTCCGCAGAACA...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCTTAGCAGGGCACCCTTaGGGACTGAATAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGLAGHP*GLNRSR
Trigger: TCTGGACCTATTCAGTCCTCAAGGGTGCCCTGCTAA...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTTAGCAGGGCACCCTTaGGGACTGAATAGGTCCAGA +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPLAGHP*GLNRSR
Trigger: TCTGGACCTATTCAGTCCTCAAGGGTGCCCTGCTAA...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTATCTCCATCACCCTTaGTTGCCAAGCCTTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFYLHHP*LPSLPL
Trigger: CAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTCCTGAAAGCCTCACATaGTCAGCTTTTAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAAPESLT*SAFSSI
Trigger: GATGGAGCTAAAAGCTGAGCATGTGAGGCTTTCAGG...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGTCGGTGCACAGCGAGTaGAAAAACCGAGAAGCGAAT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKSVHSE*KNREAN
Trigger: ATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGA...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCGGCCTCCATTCTGCTaGACACAGACTGGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGRPPFC*TQTGSP
Trigger: AGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTAGGTCCATCTTATCCTaGAGCAGGGAGCTGCTCTCT +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPRSILS*SRELLS
Trigger: AGAGAGCAGCTCCCTGCTGCAGGATAAGATGGACCT...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTTCCTCTTCTTCAGGTCCAGAGACAGCAATTCCAAAGCAGCCTTCTGCATTTCTCTACGACAGCTGCTTaGAGGTGTTCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VPLLQVQRQQFQSSLLHFSTTAA*RCSTWA
Trigger: AGCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGA...GAAATGCAGAAGGCTGCTTTGGAATTGCTGTCTCTGGACCTGAAGAAGAGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAGATGCCAGCAGCACTTaGCTGAGCCCTGGCTTCTAC +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLDASST*LSPGFY
Trigger: GTAGAAGCCAGGGCTCAGGCAAGTGCTGCTGGCATC...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGCTTCCTGCAGTTGCTaGTGCAGGACCACTATTTCC +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGASCSC*CRTTIS
Trigger: GGAAATAGTGGTCCTGCAGCAGCAACTGCAGGAAGC...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTGCTGCTGTTCTTGCTaGAGAGCCTCCAGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGCCCSC*RASSSW
Trigger: CCAGGAACTGGAGGCTCTGCAGCAAGAACAGCAGCA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTAGTGTCATATGGGCTTaGTCCAGAGCTCCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEASVIWA*SRAPWR
Trigger: CCTCCAGGGAGCTCTGGAGCAAGCCCATATGACACT...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTTTCCTCCAGCCTTCGTaGCTGTTCCTTGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILFLQPS*LFLVVL
Trigger: CAGGACCACAAGGAACAGGCACGAAGGCTGGAGGAA...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCTTTGTCTCCATGACTaGTTCTCCATTCCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGLCLHD*FSIPSG
Trigger: TCCTGATGGAATGGAGAAGCAGTCATGGAGACAAAG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTCCCTTGATGTGGTGCTaGCACCCAGCTGCACAAGTG +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELPLMWC*HPAAQV
Trigger: CACTTGTGCAGCTGGGTGGCAGCACCACATCAAGGG...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTCGGAAACAAGAACATTaGCCAGCCTCTGACGACTCT +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSRKQEH*PASDDS
Trigger: AGAGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCG...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCCGAATACTCATGGCCTaGATGAGAACACCCACATGC +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFRILMA*MRTPTC
Trigger: GCATGTGGGTGTTCTCATGCAGGCCATGAGTATTCG...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTCTCTGTGAGCCCCAGTaGCTTCCTATCTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSLCEPQ*LPISVE
Trigger: TTCTACAGAGATAGGAAGGCACTGGGGCTCACAGAG...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCAGAGGTTCTGTGGCTaGTCAATTCAGCCCCGCATC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGQRFCG*SIQPRI
Trigger: GATGCGGGGCTGAATTGAGCAGCCACAGAACCTCTG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCCACTGGCCCCAGAGCTaGAGAGGTTCTGTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTHWPQS*RGSVAA
Trigger: AGCAGCCACAGAACCTCTGCAGCTCTGGGGCCAGTG...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTCCATCACCCTTGATTaGCAAGCCTTCCCTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPSITLD*QAFPWQ
Trigger: CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACGCTCTGCCCTCTTTCTaGAGTTCAGCCACACACTTG +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDALPSF*SSATHL
Trigger: CAAGTGTGTGGCTGAACTGCAGAAAGAGGGCAGAGC...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621352.1
CDS-3UTR CCA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCTCAATCCCTCTCTGCTaGTTGGAGGCACAGATCTTC +
Preference number: 4 (lower is better)
Translates to: IGSKQMQFASFPGELGSSSIPLC*LEAQIF
Trigger: GAAGATCTGTGCCTCCAACCAGCAGAGAGGGATTGA...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTGTTGCTTGTCTCTGCTaGGCCTCCTGGGAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILVACLC*ASWEFF
Trigger: GAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAAC...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTCGCTTCTCCAGCTCTTaGCACCAGCTTCGGTACTGC +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELRFSSS*HQLRYC
Trigger: GCAGTACCGAAGCTGGTGCCAAGAGCTGGAGAAGCG...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCTCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTTTCTTCCAGATCCGTTaGGTTCCCGAGACTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PLTGEAAGSAQLYLTPKPFFQIR*VPETVL
Trigger: GAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAA...AGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCCAGGGTCCTGAAGAATaGGAGCTCCAGAGTCGGGTG +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIQGPEE*ELQSRV
Trigger: CACCCGACTCTGGAGCTCCCATTCTTCAGGACCCTG...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTCTTCCACCATGACCTaGGTTATATCCTTGATCACC +
Preference number: 4 (lower is better)
Translates to: ASILLHTDWFSSSNWRSCSSTMT*VISLIT
Trigger: GGTGATCAAGGATATAACCCAGGTCATGGTGGAAGA...GCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp GCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCAACTGGAGAAGCTGCTaGTTCAGCCCAACTTTATCT +
Preference number: 4 (lower is better)
Translates to: ASILLHTDWFSSSNWRSCNWRSC*FSPTLS
Trigger: AGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTT...GCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTAGCAGCTGTGCTTCCTaGGCCAGAAAGTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCSSCAS*ARKSAS
Trigger: GGAGGCTGACTTTCTGGCCCAGGAAGCACAGCTGCT...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGATCCTTCAGTGTCATATaGGCTTGCTCCAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGSFSVI*ACSRAP
Trigger: GGGAGCTCTGGAGCAAGCCCATATGACACTGAAGGA...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATACGGAGATCCTGGTCCTaGATCTCACCTTCTTGTATC +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIRRSWS*ISPSCI
Trigger: GATACAAGAAGGTGAGATCCAGGACCAGGATCTCCG...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTGGTATCGGAGATCCTaGTCCTGGATCTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTWYRRS*SWISPS
Trigger: AGAAGGTGAGATCCAGGACCAGGATCTCCGATACCA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTGGATCATATTCTCTTaGACCCTCTGGGCCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTWIIFS*TLWARD
Trigger: GTCTCTGGCCCAGAGGGTCCAAGAGAATATGATCCA...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGCACTGCACTCCAGCTTaGAAGACAGGACAAAACCCT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKHCTPA*KTGQNP
Trigger: AGGGTTTTGTCCTGTCTTCCAAGCTGGAGTGCAGTG...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCATGGTGTGTCTGCCTaGTTTGATCAGCACTTCAGA +
Preference number: 4 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRHGVSA*FDQHFR
Trigger: TCTGAAGTGCTGATCAAACCAGGCAGACACACCATG...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGTGGTTTGGAGCACACTaGCAGCTCTTGCTTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWWFGAH*QLLLLP
Trigger: AGGAAGAAGCAAGAGCTGCCAGTGTGCTCCAAACCA...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTTGGGTGAGATCAACTaGCCAGGAGCACAGTCCAAC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQLGEIN*PGAQSN
Trigger: GTTGGACTGTGCTCCTGGCCAGTTGATCTCACCCAA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACACTGAGAGCAGCCAGTaGGTCTCTTCTGCACAACTG +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDTESSQ*VSSAQL
Trigger: CAGTTGTGCAGAAGAGACCCACTGGCTGCTCTCAGT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGACCCGTGCATCCAACTaGCTTGACACTTTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWTRASN*LDTLKG
Trigger: CCCTTTCAAAGTGTCAAGCCAGTTGGATGCACGGGT...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACACCTGCCATTGCTTCTaGATGTACCCCTGGACTCCA +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDTCHCF*MYPWTP
Trigger: TGGAGTCCAGGGGTACATCCAGAAGCAATGGCAGGT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTTGGCAGCTGGACCCTaGGCTGAACACCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDLAAGP*AEHQDE
Trigger: TTCATCTTGGTGTTCAGCCCAGGGTCCAGCTGCCAA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGATTGGCAGCTGGACCCTaGGCTGAACACCAAGATGAA +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGLAAGP*AEHQDE
Trigger: TTCATCTTGGTGTTCAGCCCAGGGTCCAGCTGCCAA...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
3UTR CAA 72 bp AGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTaGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTC +
Preference number: 4 (lower is better)
Translates to: SKQMQFASFPGE*GSSPGLQIYFL
Trigger: GAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCTCCATTAATTCTGTGTaGTTTGTCTCCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSSINSV*FVSRIS
Trigger: GGAGATCCTGGAGACAAATCACACAGAATTAATGGA...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTTTTCAGCTTCAGTGCTaGGCGAGCCGTTCTCAGGTC +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCFQLQC*ASRSQV
Trigger: GACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAA...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTTCAAGTTCTAGAAGCTaGTGCTCCAAGACGTTCCTC +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFSSSRS*CSKTFL
Trigger: GAGGAACGTCTTGGAGCATCAGCTTCTAGAACTTGA...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAGGCCCTCCAGCTCCTTaGTCAGTTTTTGCTGGCACT +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLGPPAP*SVFAGT
Trigger: AGTGCCAGCAAAAACTGATCAAGGAGCTGGAGGGCC...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAAGGGGCCATGACCCATaGCACAGTCTTCTGTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKRGHDP*HSLLSV
Trigger: CACAGACAGAAGACTGTGTCATGGGTCATGGCCCCT...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCTGTGCGGAGGGGCCATaGCCCATGACACAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTCAEGP*PMTQSS
Trigger: AGAAGACTGTGTCATGGGTCATGGCCCCTCCGCACA...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTCTCTGTGTGGTGCAATaGGACATAATGGGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGLCVVQ*DIMGLS
Trigger: GCTCAGCCCCATTATGTCTCATTGCACCACACAGAG...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTTCAGAAGGCAGGAGGTaGGGTATTGCAGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCSEGRR*GIAGWT
Trigger: TGTCCACCCTGCAATACCTCACCTCCTGCCTTCTGA...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACTCTCCTCCTACCCCTaGCCCATTCAATTATTTTAC +
Preference number: 4 (lower is better)
Translates to: KDSIGHRPLNQPQGGHRTLSSYP*PIQLFY
Trigger: GTAAAATAATTGAATGGGTCAGGGGTAGGAGGAGAG...TGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACATTaGATGCCACCTCTCCTCTTA +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGGHRTH*MPPLLL
Trigger: TAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCC...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR GCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCACTTCCTCACAAGGGTTaGTTGTCTCTGCTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPLPHKG*LSLLGL
Trigger: GAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAG...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGAGCTTGCTCTCACACCTCTGTTaGTCCTCCTCCAATCGGACC +
Preference number: 4 (lower is better)
Translates to: WFSPTLSNAKASFKALSLLSHLC*SSSNRT
Trigger: GGTCCGATTGGAGGAGGAGCAACAGAGGTGTGAGAG...CAAGCTCAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGAGCTTGCCCTTGAAGAACTCCTaGTCCATCTGCCACTGGCTC +
Preference number: 4 (lower is better)
Translates to: WFSPTLSNAKASFKALSLPLKNS*SICHWL
Trigger: GAGCCAGTGGCAGATGGAGCAGGAGTTCTTCAAGGG...CAAGCTCAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp AGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCAAAACCGAGAAGCGAATaGAGCTGCGCCTGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: RSCWFSPTLSNAKASFKAKPRSE*SCAWRR
Trigger: CCTTCTCCAGGCGCAGCTGCATTCGCTTCTCGGTTT...TGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACAGTAAGAGCCTTGTCTaGATCCTGGTAATCAAACTG +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHSKSLV*ILVIKL
Trigger: CAGTTTGATTACCAGGATGCAGACAAGGCTCTTACT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACACTTCCGTTTGCTCTTaGCTCAGTAACTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDTSVCS*LSNSPS
Trigger: GGAAGGGGAGTTACTGAGGCAAGAGCAAACGGAAGT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTTCTAACTGGAGAAGCTaGTGGTTCAGCCCAACTTTA +
Preference number: 4 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAASNWRS*WFSPTL
Trigger: TAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGA...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAATCTGGACCTCCAGCTaGCCCTTGGTGACCTCTATC +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLIWTSS*PLVTSI
Trigger: GATAGAGGTCACCAAGGGGCAGCTGGAGGTCCAGAT...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCGGCTTCTACGACAGCTaGTTGCAGGTGTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIGFYDS*LQVFHL
Trigger: CAGGTGGAACACCTGCAAGCAGCTGTCGTAGAAGCC...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCTCTTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGAGCCTTCTTCTGCATTTCCCGTTaGTTCTCCAGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: SLSARVWVRRAKFSCRAFFCISR*FSSSWI
Trigger: AATCCAGGAACTGGAGAAGCAACGGGAAATGCAGAA...GAAGGCTCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR GCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTAGGACCACTATTTCCTaGTCTCGCTGGGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELRTTIS*SRWDRR
Trigger: CCTCCTGTCCCAGCGAGAGCAGGAAATAGTGGTCCT...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACTCTTGCCCCAGATTCTaGTTCTCTTGGATCATATTC +
Preference number: 4 (lower is better)
Translates to: RTLLGIDPLINPREDTGHSCPRF*FSWIIF
Trigger: GAATATGATCCAAGAGAAGCAGAATCTGGGGCAAGA...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTAGCTCCAGTTCATCCTaGAGCCTTTGCTGTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPSSSSS*SLCCSE
Trigger: CTCAGAACAGCAAAGGCTGCAGGATGAACTGGAGCT...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAACTCCCTTGATGTGGTaGTGCCACCCAGCTGCACAA +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPTPLMW*CHPAAQ
Trigger: TTGTGCAGCTGGGTGGCAGCACCACATCAAGGGAGT...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAACTGAAGGCCAGCCCTaGTCTGAATATCTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKTEGQP*SEYLVG
Trigger: CCCCACCAGATATTCAGAGCAGGGCTGGCCTTCAGT...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTCCACAGAGGCAATCCTaGTACTGGGCAAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEAPQRQS*YWARKV
Trigger: CACTTTCCTTGCCCAGTAGCAGGATTGCCTCTGTGG...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCACTCCTCCTCAGCTGTaGCCAGAATCATGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILITPPQL*PESCGG
Trigger: CCCTCCACATGATTCTGGGCACAGCTGAGGAGGAGT...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGACCCTTCATCCTCCCTTaGCTGCTTCTTAAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGPFILP*LLLKCG
Trigger: ACCACACTTAAGAAGCAGGCAAGGGAGGATGAAGGG...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAAGGCAGGAGCTAAGGTaGTGGAAGGAGGTGTTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKRQELR*WKEVFC
Trigger: GCAGAACACCTCCTTCCAGCACCTTAGCTCCTGCCT...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTACCAGCTGCAGTGACTaGGGCTTCATGTTGTTCAAC +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPTSCSD*GFMLFN
Trigger: GTTGAACAACATGAAGCCCCAGTCACTGCAGCTGGT...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGGATTGGTCCTCCAGTaGCTTCTAGCCGCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPGLVLQ*LLAASP
Trigger: TGGAGAAGCGGCTAGAAGCCACTGGAGGACCAATCC...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCGTTCCAGTTGTTGGCTaGCATCTGCTAGCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGVPVVG*HLLAPS
Trigger: AGAAGGAGCTAGCAGATGCCAGCCAACAACTGGAAC...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTGAGCTGCTCTCTTCTTaGAGGGCAGCAAGGTCATCT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILELLSS*RAARSS
Trigger: AGATGACCTTGCTGCCCTCCAAGAAGAGAGCAGCTC...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTGTGAGAGAGTCAGGCTaGCTTTCTCTCTCTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILVRESG*LSLSPA
Trigger: AGCTGGAGAGAGAGAAAGCCAGCCTGACTCTCTCAC...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAAGGTCCAGCGTAAGGTaGGTCAAAGCCACTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLRSSVR*VKATLW
Trigger: CCAGAGAGTGGCTTTGACCCACCTTACGCTGGACCT...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATGCAGCATCAGCTCCTaGTCTCTCCTCTCGAGATCC +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKCSISS*SLLSRS
Trigger: GGATCTCGAGAGGAGAGACCAGGAGCTGATGCTGCA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCATCAGCACACTGCTGCTaGAGGGCCAACAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPSAHCC*RANRAF
Trigger: GAAAGCTCTGTTGGCCCTCCAGCAGCAGTGTGCTGA...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTGGGGCCTAAGGCCCTaGCTCATGACCTACAGAAAA +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGWGLRP*LMTYRK
Trigger: TTTTCTGTAGGTCATGAGCCAGGGCCTTAGGCCCCA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTACATCCACGAGAACTaGCTGGACTGCCAGGGACTC +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIYIHEN*LDCQGL
Trigger: GAGTCCCTGGCAGTCCAGCCAGTTCTCGTGGATGTA...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTCGACTCTGCCAGTCCTaGGCCATGCGTATTTGGAAT +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEARLCQS*AMRIWN
Trigger: ATTCCAAATACGCATGGCCCAGGACTGGCAGAGTCG...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCAAGCCCCGATGCAACTaGAGACCACGCCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTKPRCN*RPRHLQ
Trigger: CTGGAGATGGCGTGGTCTCCAGTTGCATCGGGGCTT...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGTGCAAGGGCAATGTGTaGATTATTAATCTGGCCTTC +
Preference number: 4 (lower is better)
Translates to: RSLGWEVMVTALTHKARGCKGNV*IINLAF
Trigger: GAAGGCCAGATTAATAATCCACACATTGCCCTTGCA...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTGACCTGCAGGGCTaGAATGTTCATAGATACGGG +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHSDLQG*NVHRYG
Trigger: CCCGTATCTATGAACATTCCAGCCCTGCAGGTCAGA...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCATACTGGACCCGTTATaGCACCACATAGACAAGTTA +
Preference number: 4 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSILDPL*HHIDKL
Trigger: TAACTTGTCTATGTGGTGCCATAACGGGTCCAGTAT...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCACGCATGCTACCCCCTTaGCTGCTCAACTACCACACA +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPRMLPP*LLNYHT
Trigger: TGTGTGGTAGTTGAGCAGCCAAGGGGGTAGCATGCG...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp GCCATAGTCCATCCTTCTGATTGGCTTGACACATGGTaGGACTACAGGCGACCAGATCAGTTCCAGCTGATA +
Preference number: 4 (lower is better)
Translates to: AIVHPSDWLDTW*DYRRPDQFQLI
Trigger: TATCAGCTGGAACTGATCTGGTCGCCTGTAGTCCAACCATGTGTCAAGCCAATCAGAAGGATGGACTATGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp AGGCAGCTCCTCTCTCAGATATACAACATGCCAGCTTaGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTC +
Preference number: 4 (lower is better)
Translates to: RQLLSQIYNMPA*AQGGAPFHSYL
Trigger: GAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR TCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTTCTCCAGATCCCCTTaGCTCTTCAGCTGTATTAAC +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFFSRSP*LFSCIN
Trigger: GTTAATACAGCTGAAGAGTCAAGGGGATCTGGAGAA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATGCTTTTTCAGGTCCTaGACCTGTCCTCTCTGGGAC +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLCFFRS*TCPLWD
Trigger: GTCCCAGAGAGGACAGGTTCAGGACCTGAAAAAGCA...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCTAAGCATCTGTTGCTaGGCTGCATGTGTAGGTTTC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDLSICC*AACVGF
Trigger: GAAACCTACACATGCAGCTCAGCAACAGATGCTTAG...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTAAGCTACAGGGAATCTaGCTGGAAATAGGGACCAGG +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEAKLQGI*LEIGTR
Trigger: CCTGGTCCCTATTTCCAGTCAGATTCCCTGTAGCTT...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGGATAATCTCTGTGGCTaGGCTCTAACCTCTACTCCT +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQDNLCG*ALTSTP
Trigger: AGGAGTAGAGGTTAGAGCTCAGCCACAGAGATTATC...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTATTTGCCAAATGACTaGATAGCTGGGGCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDYLPND*IAGAGA
Trigger: TGCTCCTGCCCCAGCTATTCAGTCATTTGGCAAATA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCCTGAAAGCCTCACATaGTCAGCTTTTAGCTCCATC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQPESLT*SAFSSI
Trigger: GATGGAGCTAAAAGCTGAGCATGTGAGGCTTTCAGG...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGGCCTCCATTTCTGTCTaGTGCTCCTTTAGCCTCATT +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQASISV*CSFSLI
Trigger: AATGAGGCTAAAGGAGCAGCAGACAGAAATGGAGGC...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTTCAAGTCCTCCACCTaGTTCTGCAGGTCCATCTTA +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQFKSST*FCRSIL
Trigger: TAAGATGGACCTGCAGAAGCAGGTGGAGGACTTGAA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTTGTCTCTGCAGATCCTaGAACTCTGTGTGGACCTGG +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELCLCRS*NSVWTW
Trigger: CCAGGTCCACACAGAGTTGCAGGATCTGCAGAGACA...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCTCTACGACAGCTGCTTaGAGGTGTTCCACCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTSTTAA*RCSTWA
Trigger: AGCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGA...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGTTCTGCATTTCCCGTTaGTTCTCCAGTTCCTGGATT +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWFCISR*FSSSWI
Trigger: AATCCAGGAACTGGAGAAGCAACGGGAAATGCAGAA...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAGGTCCTCCCCAGGGTTaGAGATTTACTTCCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLGPPQG*RFTSSS
Trigger: GGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACC...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCACTCTTGTCCCCTCCTaGTTTCAGGCCTTTCCAGCC +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTTLVPS*FQAFPA
Trigger: GGCTGGAAAGGCCTGAAAGCAGGAGGGGACAAGAGT...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAACCAAGACAGGAGGTaGAAGGGCAATGTGTGGATT +
Preference number: 4 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGNQDRR*KGNVWI
Trigger: AATCCACACATTGCCCTTGCACCTCCTGTCTTGGTT...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAGGGGGTTTGAGCTTATaGTCACCTGTGGCTGACGTT +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKGGLSL*SPVADV
Trigger: AACGTCAGCCACAGGTGAGCATAAGCTCAAACCCCC...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAATGATCTCGGCTCACTaGAGCCTTGACCTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLMISAH*SLDLPG
Trigger: ACCTGGAAGGTCAAGGCTGCAGTGAGCCGAGATCAT...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAACAAATATCCACCGCATaGTACCCCCTTGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKQISTA*YPLGCS
Trigger: TGAGCAGCCAAGGGGGTAGCATGCGGTGGATATTTG...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAATGCCACTTGCCATGTaGTCTGCCCTCTTTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLMPLAM*SALFLQ
Trigger: CTGCAGAAAGAGGGCAGAGCACATGGCAAGTGGCAT...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000621352.1
CDS-3UTR CCA 90 bp AGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCAACATTTTCCCACCTCTaGGGGATTGGTCCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: RSCWFSPTLSNAKASFKATFSHL*GIGPPV
Trigger: CACTGGAGGACCAATCCCCCAGAGGTGGGAAAATGT...TGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp TGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGAGCTTGCTGCTGCACACAGACTaGTTCTCCTCCTCTAACTGG +
Preference number: 4 (lower is better)
Translates to: WFSPTLSNAKASFKALSLLLHTD*FSSSNW
Trigger: CCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAG...CAAGCTCAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGATTCGGTTATACTCCTaGGTCTCTCTCAGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWIRLYS*VSLSFS
Trigger: GGAGAAGCTGAGAGAGACCCAGGAGTATAACCGAAT...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCTGGCTCTCCAGGTCATaGATCTGGCTGCTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTWLSRS*IWLLCA
Trigger: GGCACAAAGCAGCCAGATCCATGACCTGGAGAGCCA...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGAGATTGTTCCTCCATTaGGGAGGTTTTGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQRLFLH*GGFVAV
Trigger: CACAGCCACAAAACCTCCCCAATGGAGGAACAATCT...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGTTCAGCCACACACTTaGCATCTGAGTTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGVQPHT*HLSSSV
Trigger: GACAGAAGAACTCAGATGCCAAGTGTGTGGCTGAAC...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCCTTCCTCAGCCCCTaGAATTTCTACAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWPFLSP*NFYSSS
Trigger: AGAAGAACTGTAGAAATTCCAGGGGCTGAGGAAGGG...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTACTAGGACCAGTCCATaGGTGAGAAGTTCCGCCATA +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGTRTSP*VRSSAI
Trigger: TATGGCGGAACTTCTCACCCATGGACTGGTCCTAGT...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCTTTAGAAAGCCGGAGTaGAAGATCATCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFFRKPE*KIIHKL
Trigger: GAGCTTGTGGATGATCTTCCACTCCGGCTTTCTAAA...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACAGTTGTCACCATTATTaGTGGGACACTCCACAGAGG +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDSCHHY*WDTPQR
Trigger: CCTCTGTGGAGTGTCCCACCAATAATGGTGACAACT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGCTGGATTCACCATTCTaGTTATACCCTGCCACATGT +
Preference number: 4 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKLDSPF*LYPATC
Trigger: ACATGTGGCAGGGTATAACCAGAATGGTGAATCCAG...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTACAAAGGTCCTTGGGTTaGGAGGTGATGGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLQRSLG*EVMVTA
Trigger: AGCAGTGACCATCACCTCCCAACCCAAGGACCTTTG...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCAGACAAACTTCAGATaGCCCTTATACAGGGAAGAG +
Preference number: 4 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTQTNFR*PLYREE
Trigger: CTCTTCCCTGTATAAGGGCCATCTGAAGTTTGTCTG...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTCTCGTGTCCAGATACTaGACCCGTTATGGCACCACA +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCLVSRY*TRYGTT
Trigger: TGTGGTGCCATAACGGGTCCAGTATCTGGACACGAG...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATAAGAGAAAGGGAAAACTaGCGGTGGCTATTACCTCAA +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIREREN*RWLLPQ
Trigger: TTGAGGTAATAGCCACCGCCAGTTTTCCCTTTCTCT...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTTTCAGGTAGCCCTTaGAGAACTCCTGCTCCATCT +
Preference number: 4 (lower is better)
Translates to: RSCWFSPTLSNAKASFKALSGSP*RTPAPS
Trigger: AGATGGAGCAGGAGTTCTTCAAGGGCTACCTGAAAG...TGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACTTAGATTTCTCTTCCTaGTTCTGGGAGAGCTGTCTC +
Preference number: 4 (lower is better)
Translates to: FILISITLDCQAFPWQLDLDFSS*FWESCL
Trigger: GAGACAGCTCTCCCAGAATCAGGAAGAGAAATCTAA...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTCAACGCTGTGTTTTTaGGGCCCCAGAACTTCTTTT +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPSTLCF*GPRTSF
Trigger: AAAAGAAGTTCTGGGGCCTCAAAAACACAGCGTTGA...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCCAGATCAGTTCCAGCTaGTATGCCCAGGAAGCGACA +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTQISSS*YAQEAT
Trigger: TGTCGCTTCCTGGGCATATCAGCTGGAACTGATCTG...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTTACTGGAACCAGGGGTaGGTGATAAACAGTCTGTGT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILYWNQG*VINSLC
Trigger: ACACAGACTGTTTATCACTCACCCCTGGTTCCAGTA...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCATAAACCGACATCCCTaGCACATTGTGGTGCACCAG +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIINRHP*HIVVHQ
Trigger: CTGGTGCACCACAATGTGTCAGGGATGTCGGTTTAT...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATTATCCCAGGATTTCTaGCAACAACTCTACCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYILSQDF*QQLYLP
Trigger: AGGAAGGTAGAGTTGTTGGCAGAAATCCTGGGATAA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGTCTAACTGGAGAAGCTaGTGGTTCAGCCCAACTTTA +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWSNWRS*WFSPTL
Trigger: TAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGA...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTACGGCCATGGGCAGATaGTCTAAAACAGACCTACAC +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELTAMGR*SKTDLH
Trigger: GTGTAGGTCTGTTTTAGAGCATCTGCCCATGGCCGT...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTGGAGGTGATGGTCACTaGTCTAACACACAAAGCACG +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCGGDGH*SNTQST
Trigger: CGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCC...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTTGGAAGTCAGCTCACTaGTTTTGTGGCTGGGGTTTC +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELWKSAH*FCGWGF
Trigger: GAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCA...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTTTATCCCAGGATTTCTaGCAACAACTCTACGGTGTC +
Preference number: 4 (lower is better)
Translates to: PLTGEAAGSAQLYLTPKPLSQDF*QQLYGV
Trigger: GACACCGTAGAGTTGTTGGCAGAAATCCTGGGATAA...AGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp AGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCATCAATCCCTCTCTGCTaGTTGGAGGCACAGATCTTC +
Preference number: 4 (lower is better)
Translates to: RSCWFSPTLSNAKASFKASIPLC*LEAQIF
Trigger: GAAGATCTGTGCCTCCAACCAGCAGAGAGGGATTGA...TGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTCAGCTCATCCAGGTTTaGCTCCTCCACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCQLIQV*LLHIFP
Trigger: TGGGAAAATGTGGAGGAGCCAAACCTGGATGAGCTG...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTCAGCTCATCCAGGTTTaGCTCCTCCACATTTTCCCA +
Preference number: 4 (lower is better)
Translates to: NWRSCWFSPTLSNAKASFQLIQV*LLHIFP
Trigger: TGGGAAAATGTGGAGGAGCCAAACCTGGATGAGCTG...AAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp TGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGAGCTTGTTCTCCTCCTCTAACTaGAGAAGCTGCTGGTTCAGC +
Preference number: 4 (lower is better)
Translates to: WFSPTLSNAKASFKALSLFSSSN*RSCWFS
Trigger: GCTGAACCAGCAGCTTCTCCAGTTAGAGGAGGAGAA...CAAGCTCAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTACCTGTTCTCATCAACTaGACTGTAGGCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLPVLIN*TVGCLW
Trigger: CCACAGACAGCCTACAGTCCAGTTGATGAGAACAGG...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTAGATTGGCTTGACACATaGTTGGACTACAGGCGACCA +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLDWLDT*LDYRRP
Trigger: TGGTCGCCTGTAGTCCAACCATGTGTCAAGCCAATC...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTGTCCATCCTTCTGATTaGCTTGACACATGGTTGGAC +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGVHPSD*LDTWLD
Trigger: GTCCAACCATGTGTCAAGCCAATCAGAAGGATGGAC...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTAAAATTAGCCGGGCATaGTGGCACGTGTCTATAATC +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPKISRA*WHVSII
Trigger: GATTATAGACACGTGCCACCATGCCCGGCTAATTTT...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTACTCCTCCCGTCTGCTaGATTCACCATTCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGTPPVC*IHHSGY
Trigger: ATAACCAGAATGGTGAATCCAGCAGACGGGAGGAGT...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATACTCCTGCATGTTCTaGTGGCCAATTGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKYSCMF*WPIAPS
Trigger: GGAAGGTGCAATTGGCCACCAGAACATGCAGGAGTA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTGGCGCAGACAGCCTTTaGCACTTTGGTGTCAACATT +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCGADSL*HFGVNI
Trigger: AATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCC...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGTCTTCATTTTGCTTCTaGGACTGGGTCAACAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCWFSPTLSNAKASFKALSSFCF*DWVNRA
Trigger: TGCTCTGTTGACCCAGTCTCAGAAGCAAAATGAAGA...CAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR TCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTGACAGCAGCAGAAAATaGATGCAAAGATCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELDSSRK*MQRSQG
Trigger: ACCCTGGGATCTTTGCATTCATTTTCTGCTGCTGTC...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCTCCCTCTGTCATCTaGACAGCCATAACACTCCAT +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILISPSVI*TAITLH
Trigger: ATGGAGTGTTATGGCTGTTCAGATGACAGAGGGAGA...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATCCTTCCCTATCACAGTaGATGGTGTACAATAAATGC +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHPSLSQ*MVYNKC
Trigger: GCATTTATTGTACACCATGCACTGTGATAGGGAAGG...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGTTCTGGTGGCCAATTaGACCTTCCTCAAGTACATC +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPVLVAN*TFLKYI
Trigger: GATGTACTTGAGGAAGGTGCAATTGGCCACCAGAAC...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTTCTAACCTCTACTCCTaGATGTTCTGGTGGCCAATT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILSNLYS*MFWWPI
Trigger: AATTGGCCACCAGAACATGCAGGAGTAGAGGTTAGA...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCCCTGACACATTGTGGTaGACCAGGTGTCTAGGAATG +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTPDTLW*TRCLGM
Trigger: CATTCCTAGACACCTGGTGCACCACAATGTGTCAGG...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAGCTGTATTAACTCCTaGCTCCTTTCATGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NWRSCWFSPTLSNAKASFSCINS*LLSWAS
Trigger: GGAAGCCCATGAAAGGAGCCAGGAGTTAATACAGCT...AAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCCCTATCACAGTGCATaGTGTACAATAAATGCATGC +
Preference number: 4 (lower is better)
Translates to: PLFILISITLDCQAFPWQPYHSA*CTINAC
Trigger: GCATGCATTTATTGTACACCATGCACTGTGATAGGG...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTGTCACCATTATTGGTaGGACACTCCACAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILICHHYW*DTPQRQ
Trigger: TTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACA...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTACTGATGTAATGAGTTaGGTGAGATCAACTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILTDVMS*VRSTGQ
Trigger: CTGGCCAGTTGATCTCACCCAACTCATTACATCAGT...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGTGGATTATTAATCTaGCCTTCCCTGATTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VVPLFILISITLDCQAFPCGLLI*PSLIPS
Trigger: TGAGGGAATCAGGGAAGGCCAGATTAATAATCCACA...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATCTAACCTGAATGAATaGATAACACCTGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISNLNE*ITPAIA
Trigger: AGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CCTTATACAGGGAAGAGAGTTATAGCCAAAGGCTCCAGCATGAATCATCAAACCATCCCTGACACATTGTaGTGCACCAGGTGTCTAGGA +
Preference number: 4 (lower is better)
Translates to: PYTGKRVIAKGSSMNHQTIPDTL*CTRCLG
Trigger: TCCTAGACACCTGGTGCACCACAATGTGTCAGGGAT...GGTTTGATGATTCATGCTGGAGCCTTTGGCTATAACTCTCTTCCCTGTATAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAACCTGGGTTATATCCTTaGTCACCTGCTGTAAAGACA +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKPGLYP*SPAVKT
Trigger: TGTCTTTACAGCAGGTGATCAAGGATATAACCCAGG...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCTTAGTAATTCCATCTaGGCACTGAGCTCTTTCTGT +
Preference number: 4 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILLSNSI*ALSSFC
Trigger: ACAGAAAGAGCTCAGTGCTCAGATGGAATTACTAAG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGCTCAACCCCTTACTCTaGAAATTGGTAATTAAAGGT +
Preference number: 4 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWLNPLL*KLVIKG
Trigger: ACCTTTAATTACCAATTTTCAGAGTAAGGGGTTGAG...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATATATCCTTGATCACCTaGTGTAAAGACAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHISLIT*CKDNFS
Trigger: GGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATAT...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CCTCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTATATCCTTGATCACCTaGTGTAAAGACAACTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLTGEAAGSAQLYLTPKPISLIT*CKDNFS
Trigger: GGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATAT...AGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTGATTCTAGGGAGTTCTaGTTTCCTTCCCACTTAGAT +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGDSREF*FPSHLD
Trigger: ATCTAAGTGGGAAGGAAAGCAGAACTCCCTAGAATC...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTATGGTGTACAATAAATaGATGCTACCTCAACAGGAA +
Preference number: 4 (lower is better)
Translates to: STPGRTQDTLNATSPLSFMVYNK*MLPQQE
Trigger: TTCCTGTTGAGGTAGCATGCATTTATTGTACACCAT...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTGGAAAAAGAAATAAATaGCCTAAAAGCCAGGTAAGG +
Preference number: 4 (lower is better)
Translates to: QFQLICPGSDISRTFTQSGKRNK*PKSQVR
Trigger: CCTTACCTGGCTTTTAGGCCATTTATTTCTTTTTCC...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGAATAGCCTCAGTAAATaGGTTTCCAGTTACTGTGTA +
Preference number: 4 (lower is better)
Translates to: VPLFILISITLDCQAFPWNSLSK*VSSYCV
Trigger: TACACAGTAACTGGAAACTCATTTACTGAGGCTATT...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGACAACTTCTCCTCTTaGGCATTCCTACTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPDNFSS*AFLLRD
Trigger: ATCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTC...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp AGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCAGACAACTTCTCCTCTTaGGCATTCCTACTAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RSCWFSPTLSNAKASFKADNFSS*AFLLRD
Trigger: ATCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTC...TGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CCA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTGTAGTATCCCAGTaGTCTCCTGCTCCTTTAATT +
Preference number: 4 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLSVVSQ*SPAPLI
Trigger: AATTAAAGGAGCAGGAGACCACTGGGATACTACAGA...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTAAACAGGGCCTATTCTaGGCTTTAAGAATAACGTGG +
Preference number: 4 (lower is better)
Translates to: AQRSNLNEWITPAIASGCKQGLF*ALRITW
Trigger: CCACGTTATTCTTAAAGCCCAGAATAGGCCCTGTTT...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTTGAGAAGAATGAGGTaGGAAACTGCTATCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHLRRMR*ETAIFF
Trigger: AAAGAAGATAGCAGTTTCCCACCTCATTCTTCTCAA...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp GTTTCTGGGGTTTCAGAAGTTTTCACTAAGCATCTGTaGCTGAGCTGCATGTGTAGGTTTCTGGAACAAAGC +
Preference number: 4 (lower is better)
Translates to: VSGVSEVFTKHL*LSCMCRFLEQS
Trigger: GCTTTGTTCCAGAAACCTACACATGCAGCTCAGCAACAGATGCTTAGTGAAAACTTCTGAAACCCCAGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTAGATTTGCGGCAATTTaGGCATCAAAAATAGCAACT +
Preference number: 4 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEARFAAI*ASKIAT
Trigger: AGTTGCTATTTTTGATGCTCAAATTGCCGCAAATCT...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAGCAGCAGAAAATGAATaGAAAGATCCCAGGGTTTAT +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKAAENE*KDPRVY
Trigger: ATAAACCCTGGGATCTTTGCATTCATTTTCTGCTGC...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCACAGAATTTTGTTGTTaGGCTTCAAACAGACTGCTC +
Preference number: 4 (lower is better)
Translates to: RYTTCQLWHRVVPLFILITEFCC*ASNRLL
Trigger: GAGCAGTCTGTTTGAAGCCCAACAACAAAATTCTGT...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR TCA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAAAAAATAAATTCTAGATaGGAGGCAGTACATGTCCCT +
Preference number: 4 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKKINSR*EAVHVP
Trigger: AGGGACATGTACTGCCTCTCATCTAGAATTTATTTT...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
42% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR GCA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTGTACAATAAATGCATaGTACCTCAACAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGCTINA*YLNRNL
Trigger: AAGATTCCTGTTGAGGTAGCATGCATTTATTGTACA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CCA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTAAGTACAAGAACACTTaGACATTAGATTTGCGGCAA +
Preference number: 4 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELKYKNT*TLDLRQ
Trigger: TTGCCGCAAATCTAATGTCCAAGTGTTCTTGTACTT...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
3UTR CAA 72 bp GTGTACAATAAATGCATGCTACCTCAACAGGAATCTTaGGCAAGTTCTTCCCAGATAAACTCCCTTGATGTG +
Preference number: 4 (lower is better)
Translates to: VYNKCMLPQQES*ASSSQINSLDV
Trigger: CACATCAAGGGAGTTTATCTGGGAAGAACTTGCCAAAGATTCCTGTTGAGGTAGCATGCATTTATTGTACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 90 bp CTTCGGCGCCGACTGGAGCTTAGCGTGCTGGCGGCAGCAAGAAGCTaGGGCAAGCGGGCCCCGGGCCCTAACGACGCGTCCCAGCCCCTC +
Preference number: 5 (lower is better)
Translates to: LRRRLELSVLAAARS*GKRAPGPNDASQPL
Trigger: GAGGGGCTGGGACGCGTCGTTAGGGCCCGGGGCCCGCTTGCCTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCGGCGCCGAAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS GCA 90 bp ACGAGGGTCGGGAAGCTCTCCTTCGGCGCCGACTGGAGCTTAGCGTaGTGGCGGCAGCAAGAAGCTGAGGCAAGCGGGCCCCGGGCCCTA +
Preference number: 5 (lower is better)
Translates to: TRVGKLSFGADWSLA*WRQQEAEASGPRAL
Trigger: TAGGGCCCGGGGCCCGCTTGCCTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCGGCGCCGAAGGAGAGCTTCCCGACCCTCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS CCA 90 bp AGGGTCGGGAAGCTCTCCTTCGGCGCCGACTGGAGCTTAGCGTGCTaGCGGCAGCAAGAAGCTGAGGCAAGCGGGCCCCGGGCCCTAACG +
Preference number: 5 (lower is better)
Translates to: RVGKLSFGADWSLAC*RQQEAEASGPRALT
Trigger: CGTTAGGGCCCGGGGCCCGCTTGCCTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCGGCGCCGAAGGAGAGCTTCCCGACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS TCA 90 bp TCTGCCTGCTCGAGGAGATGCTGCTCTTTCCCCTGCAGGGCAGCATaGGCCTTGCCAAGGGCCTCCTGCAGAGCCTCAGCCCGGGCCCGG +
Preference number: 5 (lower is better)
Translates to: SACSRRCCSFPCRAA*ALPRASCRASARAR
Trigger: CCGGGCCCGGGCTGAGGCTCTGCAGGAGGCCCTTGGCAAGGCTCATGCTGCCCTGCAGGGGAAAGAGCAGCATCTCCTCGAGCAGGCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CGGGCTGCTGCTCTGCGGCCAGCGCTTCTAGCTGGCTCTCTGTGCTaGGCAGTCGCAGCTGTAGTTGGGCTGCCTTGGCTTCCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RAAALRPALLAGSLC*AVAAVVGLPWLPGP
Trigger: GGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGCCGCAGAGCAGCAGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS GCA 90 bp TCCCGGGCTGCTGCTCTGCGGCCAGCGCTTCTAGCTGGCTCTCTGTaGTGCGCAGTCGCAGCTGTAGTTGGGCTGCCTTGGCTTCCTGGG +
Preference number: 5 (lower is better)
Translates to: SRAAALRPALLAGSL*CAVAAVVGLPWLPG
Trigger: CCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGCCGCAGAGCAGCAGCCCGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CCA 90 bp TGGGCCTGGTTCCCGGGCTGCTGCTCTGCGGCCAGCGCTTCTAGCTaGCTCTCTGTGCTGCGCAGTCGCAGCTGTAGTTGGGCTGCCTTG +
Preference number: 5 (lower is better)
Translates to: WAWFPGCCSAASASS*LSVLRSRSCSWAAL
Trigger: CAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGCCGCAGAGCAGCAGCCCGGGAACCAGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CCA 90 bp CGGCTACTGGACACGAGGGTCGGGAAGCTCTCCTTCGGCGCCGACTaGAGCTTAGCGTGCTGGCGGCAGCAAGAAGCTGAGGCAAGCGGG +
Preference number: 5 (lower is better)
Translates to: RLLDTRVGKLSFGAD*SLACWRQQEAEASG
Trigger: CCCGCTTGCCTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCGGCGCCGAAGGAGAGCTTCCCGACCCTCGTGTCCAGTAGCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS GCA 90 bp AGCTCCTTGGCTGAGCTGAGCCCCTGTAGTTGTTCAGCGAGGTCCTaGCGGTCACGCTCCACGGCCTGCAGCCGCACCTCTAGAGCCGCT +
Preference number: 5 (lower is better)
Translates to: SSLAELSPCSCSARS*RSRSTACSRTSRAA
Trigger: AGCGGCTCTAGAGGTGCGGCTGCAGGCCGTGGAGCGTGACCGGCAGGACCTCGCTGAACAACTACAGGGGCTCAGCTCAGCCAAGGAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp AGAGCTTCCAGCTCCTGGTCCCGTTCCTTGAGCACTGCCTGGGCCTaGAGCCAGCTGTCCTGCAGGGCCCTGGTCTCCACCTCATGCTCC +
Preference number: 5 (lower is better)
Translates to: RASSSWSRSLSTAWA*SQLSCRALVSTSCS
Trigger: GGAGCATGAGGTGGAGACCAGGGCCCTGCAGGACAGCTGGCTGCAGGCCCAGGCAGTGCTCAAGGAACGGGACCAGGAGCTGGAAGCTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp CCAGCTGCACACCCTGCTCCCCTCTGGACCCCAGTTCTGCTGTGCTaGTTGCACCTGGGCTGTGTAGCCGCTCCTTCTCCAGAGCCCGTC +
Preference number: 5 (lower is better)
Translates to: PAAHPAPLWTPVLLC*LHLGCVAAPSPEPV
Trigger: GACGGGCTCTGGAGAAGGAGCGGCTACACAGCCCAGGTGCAACCAGCACAGCAGAACTGGGGTCCAGAGGGGAGCAGGGTGTGCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CTGCCGACTGTGTGCCTGGCAGGCATCCAGGGAGGCTTGCAGGGTTaGAGTGCTGGCCTCCAGACTGCGGCTCAATTCTGCCTGCTCGAG +
Preference number: 5 (lower is better)
Translates to: LPTVCLAGIQGGLQG*SAGLQTAAQFCLLE
Trigger: CTCGAGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTCGGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp TCCTCCAGCTGCCGACTGTGTGCCTGGCAGGCATCCAGGGAGGCTTaGAGGGTTGCAGTGCTGGCCTCCAGACTGCGGCTCAATTCTGCC +
Preference number: 5 (lower is better)
Translates to: SSSCRLCAWQASREA*RVAVLASRLRLNSA
Trigger: GGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTCGGCAGCTGGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CGCTCCACCTGCTCCAAGGTACTCCGCAGCTGGACATTGTGGCGCTaGAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACTGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RSTCSKVLRSWTLWR*SLLLSISSRATACC
Trigger: GCAGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp AGCGCTTCTAGCTGGCTCTCTGTGCTGCGCAGTCGCAGCTGTAGTTaGGCTGCCTTGGCTTCCTGGGCCCACAAGGAGGCTCGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: SASSWLSVLRSRSCS*AALASWAHKEARSC
Trigger: GCAGCTGCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CCA 90 bp GTGGGTGAAGAAGCCGTGGCCTTGCTGATCTCTAGGGACCCTGCCTaGGCCGCACGCATGGCCTCCCTCTTCAGCTTCCTCCGTTCTCGC +
Preference number: 5 (lower is better)
Translates to: VGEEAVALLISRDPA*AARMASLFSFLRSR
Trigger: GCGAGAACGGAGGAAGCTGAAGAGGGAGGCCATGCGTGCGGCCCAGGCAGGGTCCCTAGAGATCAGCAAGGCCACGGCTTCTTCACCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp CTTGCTGAGAGAGTCCACCTCTCCCTGGAGGTCCACAGTCTGCCCTaGCAGAGTGTCCCGCTCCCCAGTGAGCTTCTGCAGCCGCTGTCT +
Preference number: 5 (lower is better)
Translates to: LAERVHLSLEVHSLP*QSVPLPSELLQPLS
Trigger: AGACAGCGGCTGCAGAAGCTCACTGGGGAGCGGGACACTCTGGCAGGGCAGACTGTGGACCTCCAGGGAGAGGTGGACTCTCTCAGCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS GCA 90 bp AGGACCACCTGCTCCAAGGTACTCCGCAGCTGGACATTGTGGCGCTaGAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACTGCTTGCTGC +
Preference number: 5 (lower is better)
Translates to: RTTCSKVLRSWTLWR*SLLLSISSRATACC
Trigger: GCAGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422671.1
CDS CCA 90 bp GCAGCAGCTGGGCCGGCTCCCGCCCATCCATTCTTCCAGATCCGTTaGGTTCCCGAGACTGTGCTCCCACAGTCAAGCGCAGACAACAGG +
Preference number: 5 (lower is better)
Translates to: AAAGPAPAHPFFQIR*VPETVLPQSSADNR
Trigger: CCTGTTGTCTGCGCTTGACTGTGGGAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAATGGATGGGCGGGAGCCGGCCCAGCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS CCA 90 bp TTCTGCAGCAGCTCTCGCTCCTTGCTGAGAGAGTCCACCTCTCCCTaGAGGTCCACAGTCTGCCCTGCCAGAGTGTCCCGCTCCCCAGTG +
Preference number: 5 (lower is better)
Translates to: FCSSSRSLLRESTSP*RSTVCPARVSRSPV
Trigger: CACTGGGGAGCGGGACACTCTGGCAGGGCAGACTGTGGACCTCCAGGGAGAGGTGGACTCTCTCAGCAAGGAGCGAGAGCTGCTGCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS CCA 90 bp GGGAGAGTGCCAAGTCCTGGGCCTTCTCCCTCCACTCAATCTCCCTaGCTTCTGTCTGTCTCAGGGCTGCCTGTAGCCGCTCCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: GRVPSPGPSPSTQSP*LLSVSGLPVAAPAP
Trigger: GGGAGCTGGAGCGGCTACAGGCAGCCCTGAGACAGACAGAAGCCAGGGAGATTGAGTGGAGGGAGAAGGCCCAGGACTTGGCACTCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp CGTTCTCGCTCCACCTGCTCCAAGGTACTCCGCAGCTGGACATTGTaGCGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: RSRSTCSKVLRSWTL*RCSLLLSISSRATA
Trigger: AGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGAGCGAGAACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp TGCAGCAGGACCACCTGCTCCAAGGTACTCCGCAGCTGGACATTGTaGCGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: CSRTTCSKVLRSWTL*RCSLLLSISSRATA
Trigger: AGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGTCCTGCTGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422671.1
CDS TCA 90 bp GCAAGGTCATCTCTGTGCTGCCGGGCTGCCTCCTTCAGCTCCCGTTaGGCCTCCTGGAGCTGGGTCTGTAGTATCCCAGTGGTCTCCTGC +
Preference number: 5 (lower is better)
Translates to: ARSSLCCRAASFSSR*ASWSWVCSIPVVSC
Trigger: GCAGGAGACCACTGGGATACTACAGACCCAGCTCCAGGAGGCTCAACGGGAGCTGAAGGAGGCAGCCCGGCAGCACAGAGATGACCTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 90 bp CTTGGGCCCTTCCCTTCCTCTGCCCGTTCCTGCATCAGCTGCCTCTaGGTGGTCAGCTCCCGGCCTCGCTCTCTCAAGGACAGCTTGATC +
Preference number: 5 (lower is better)
Translates to: LGPFPSSARSCISCL*VVSSRPRSLKDSLI
Trigger: GATCAAGCTGTCCTTGAGAGAGCGAGGCCGGGAGCTGACCACTCAGAGGCAGCTGATGCAGGAACGGGCAGAGGAAGGGAAGGGCCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CTGGACCCGCCGTCCCTCCACTGCCAGCTCTTCCTCCAGCCTTCGTaGCTGTTCCTTGTGGTCCTGAAGCTCTCCATGACGCTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: LDPPSLHCQLFLQPS*LFLVVLKLSMTLLQ
Trigger: CTGAAGGAGCGTCATGGAGAGCTTCAGGACCACAAGGAACAGGCACGAAGGCTGGAGGAAGAGCTGGCAGTGGAGGGACGGCGGGTCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp GCCCTGGTCTCCACCTCATGCTCCTGTGCCTGCTCAGCACACTGCTaGTGGAGGGCCAACAGAGCTTTCTCCTGTTCCCGAGACTCAGCC +
Preference number: 5 (lower is better)
Translates to: ALVSTSCSCACSAHC*WRANRAFSCSRDSA
Trigger: GGCTGAGTCTCGGGAACAGGAGAAAGCTCTGTTGGCCCTCCAGCAGCAGTGTGCTGAGCAGGCACAGGAGCATGAGGTGGAGACCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp GGCTTGCAGGGTTGCAGTGCTGGCCTCCAGACTGCGGCTCAATTCTaGCTGCTCGAGGAGATGCTGCTCTTTCCCCTGCAGGGCAGCATG +
Preference number: 5 (lower is better)
Translates to: GLQGCSAGLQTAAQF*LLEEMLLFPLQGSM
Trigger: CATGCTGCCCTGCAGGGGAAAGAGCAGCATCTCCTCGAGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp GACTGTGTGCCTGGCAGGCATCCAGGGAGGCTTGCAGGGTTGCAGTaGTGGCCTCCAGACTGCGGCTCAATTCTGCCTGCTCGAGGAGAT +
Preference number: 5 (lower is better)
Translates to: DCVPGRHPGRLAGLQ*WPPDCGSILPARGD
Trigger: ATCTCCTCGAGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CTCACCTTCTTGTATCCTCAGAGCCTCCTCCAGCTGCCGACTGTGTaGCTGGCAGGCATCCAGGGAGGCTTGCAGGGTTGCAGTGCTGGC +
Preference number: 5 (lower is better)
Translates to: LTFLYPQSLLQLPTV*LAGIQGGLQGCSAG
Trigger: GCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTCGGCAGCTGGAGGAGGCTCTGAGGATACAAGAAGGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CCTGCTCCAAGGTACTCCGCAGCTGGACATTGTGGCGCTGCAGCCTaGTCCTGTCAATCTCCAGCCGGGCCACTGCTTGCTGCAGGTGTT +
Preference number: 5 (lower is better)
Translates to: PAPRYSAAGHCGAAA*SCQSPAGPLLAAGV
Trigger: AACACCTGCAGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp GCTTCCTTCTCCAGCTCCTGGGTCTTGGCTAGTAGCAGCAGCAGCTaGGCCGGCTCCCGCCCATCCATTCTTCCAGATCCGTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: ASFSSSWVLASSSSS*AGSRPSILPDPLGS
Trigger: GGAACCCAACGGATCTGGAAGAATGGATGGGCGGGAGCCGGCCCAGCTGCTGCTGCTACTAGCCAAGACCCAGGAGCTGGAGAAGGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS-3UTR CAA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGCCCACCTCTGGGGGATaGGTCCTCCAGTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQPTSGG*VLQWLL
Trigger: TAGAAGCCACTGGAGGACCAATCCCCCAGAGGTGGG...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTTCCAGCTCCTGGGTCTaGGCTAGTAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPSSSWV*ASSSSS
Trigger: GCTGCTGCTGCTACTAGCCAAGACCCAGGAGCTGGA...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTGTAGTTGGGCTGCCTaGGCTTCCTGGGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYCSWAA*ASWAHK
Trigger: CTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 90 bp TGCTGGGCCTCCTGGGAGTTCTTCAGCTTCCGCCAGGAGGCTGCCTaGTTCTCTGCCATCTGCTGCTGTAGTGCCAGCACCTGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CWASWEFFSFRQEAA*FSAICCCSASTCSS
Trigger: GGAAGAGCAGGTGCTGGCACTACAGCAGCAGATGGCAGAGAATCAGGCAGCCTCCTGGCGGAAGCTGAAGAACTCCCAGGAGGCCCAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000420564.5
ENST00000425934.5
ENST00000446710.5
ENST00000461386.5
CDS GCA 90 bp ACGGTGTCAACGAGGGGCCGGGAAAGTAACTCGGTGCACAGCGAGTaGAAAAACCGAGAAGCGAATGCAGCTGCGCCTGGAGAAGGCGGC +
Preference number: 5 (lower is better)
Translates to: TVSTRGRESNSVHSE*KNREANAAAPGEGG
Trigger: GCCGCCTTCTCCAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCCGGCCCCTCGTTGACACCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000461386.5
CDS GCA 90 bp AGGGCCCTGGTCTCCACCTCATGCTCCTGTGCCTGCTCAGCACACTaGTGCTGGAGGGCCAACAGAGCTTTCTCCTGTTCCCGAGACTCA +
Preference number: 5 (lower is better)
Translates to: RALVSTSCSCACSAH*CWRANRAFSCSRDS
Trigger: TGAGTCTCGGGAACAGGAGAAAGCTCTGTTGGCCCTCCAGCAGCAGTGTGCTGAGCAGGCACAGGAGCATGAGGTGGAGACCAGGGCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp AGGCATCCAGGGAGGCTTGCAGGGTTGCAGTGCTGGCCTCCAGACTaGGGCTCAATTCTGCCTGCTCGAGGAGATGCTGCTCTTTCCCCT +
Preference number: 5 (lower is better)
Translates to: RHPGRLAGLQCWPPD*GSILPARGDAALSP
Trigger: AGGGGAAAGAGCAGCATCTCCTCGAGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp GCTTCCTGCAGTTGCTGCTGCAGGACCACTATTTCCTGCTCTCGCTaGGACAGGAGGAGGCTGGTCTCACCTACCTTCCTGTGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: ASCSCCCRTTISCSR*DRRRLVSPTFLCRP
Trigger: GGGCCTGCACAGGAAGGTAGGTGAGACCAGCCTCCTCCTGTCCCAGCGAGAGCAGGAAATAGTGGTCCTGCAGCAGCAACTGCAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACCTCCTTCAGCTCCCGTaGAGCCTCCTGGAGCTGGGT +
Preference number: 5 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNLLQLP*SLLELG
Trigger: ACCCAGCTCCAGGAGGCTCAACGGGAGCTGAAGGAG...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTTCTCCTGCAGCTCTCTaGCCAGAACGGTGCTGTGGC +
Preference number: 5 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTSPAAL*PERCCG
Trigger: GCCACAGCACCGTTCTGGCAAGAGAGCTGCAGGAGA...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATGCAAAGGTCCTTGGGTaGGGAGGTGATGGTCACTGC +
Preference number: 5 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYAKVLG*GGDGHC
Trigger: GCAGTGACCATCACCTCCCAACCCAAGGACCTTTGC...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTGGTTCACTGCAACCTaGACCTCCCTGGGCTCAGGT +
Preference number: 5 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYWFTAT*TSLGSG
Trigger: ACCTGAGCCCAGGGAGGTCAAGGTTGCAGTGAACCA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp GCCACCTGTGAACGGTGTCAACGAGGGGCCGGGAAAGTAACTCGGTaGACAGCGAGTGCAAAAACCGAGAAGCGAATGCAGCTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: ATCERCQRGAGKVTR*TASAKTEKRMQLRL
Trigger: CAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCCGGCCCCTCGTTGACACCGTTCACAGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp AGGAACATGGCTACCTCCTGCAGACTGCTGACACTGGCCTTGGTCTaGGCTAGGGAGAGTGCCAAGTCCTGGGCCTTCTCCCTCCACTCA +
Preference number: 5 (lower is better)
Translates to: RNMATSCRLLTLALV*ARESAKSWAFSLHS
Trigger: TGAGTGGAGGGAGAAGGCCCAGGACTTGGCACTCTCCCTAGCGCAGACCAAGGCCAGTGTCAGCAGTCTGCAGGAGGTAGCCATGTTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp TGTGCCTGCAGCTCCTGGCTCCTTTCTTCTAGGTCCAGCGTAAGGTaGGTCAAAGCCACTCTCTGGGTTTCCCTCTGGCCCTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: CACSSWLLSSRSSVR*VKATLWVSLWPSSS
Trigger: GGAGCTGGAGGGCCAGAGGGAAACCCAGAGAGTGGCTTTGACCCACCTTACGCTGGACCTAGAAGAAAGGAGCCAGGAGCTGCAGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp CTGGTCTCCACCTCATGCTCCTGTGCCTGCTCAGCACACTGCTGCTaGAGGGCCAACAGAGCTTTCTCCTGTTCCCGAGACTCAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LVSTSCSCACSAHCC*RANRAFSCSRDSAL
Trigger: AAGGGCTGAGTCTCGGGAACAGGAGAAAGCTCTGTTGGCCCTCCAGCAGCAGTGTGCTGAGCAGGCACAGGAGCATGAGGTGGAGACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCAGTGTCATATGGGCTaGCTCCAGAGCTCCCTGGAG +
Preference number: 5 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTQCHMG*LQSSLE
Trigger: CTCCAGGGAGCTCTGGAGCAAGCCCATATGACACTG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCGTGTTCTGCGGACGGTaGAGGAAGGGATGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPVFCGR*RKGWRP
Trigger: TGGCCTCCATCCCTTCCTCAACCGTCCGCAGAACAC...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 90 bp TGTGGTGCAGGCCTGCTAGCTCACGGCTGGTCTGTGCTGAGCGGGTaGTGTAGTCCTGCTTCTGCTTCCGCTCCAAAGTCAGCTGAGCTT +
Preference number: 5 (lower is better)
Translates to: CGAGLLAHGWSVLSG*CSPASASAPKSAEL
Trigger: AAGCTCAGCTGACTTTGGAGCGGAAGCAGAAGCAGGACTACATCACCCGCTCAGCACAGACCAGCCGTGAGCTAGCAGGCCTGCACCACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CTCTTGCCAGAACGGTGCTGTGGCTCTCCAGGTCATGGATCTGGCTaGTTTGTGCCTGCAGCTCCTGGCTCCTTTCTTCTAGGTCCAGCG +
Preference number: 5 (lower is better)
Translates to: LLPERCCGSPGHGSG*FVPAAPGSFLLGPA
Trigger: CGCTGGACCTAGAAGAAAGGAGCCAGGAGCTGCAGGCACAAAGCAGCCAGATCCATGACCTGGAGAGCCACAGCACCGTTCTGGCAAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp AGGAGGAGGCTGGTCTCACCTACCTTCCTGTGCAGGCCCTGGAGCTaGTGCTCCAGCTGGTCTTTGAGCTCCTGGAGTTCATGGATATGC +
Preference number: 5 (lower is better)
Translates to: RRRLVSPTFLCRPWS*CSSWSLSSWSSWIC
Trigger: GCATATCCATGAACTCCAGGAGCTCAAAGACCAGCTGGAGCAGCAGCTCCAGGGCCTGCACAGGAAGGTAGGTGAGACCAGCCTCCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp GCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCCCCACCTCTGGGGGATaGGTCCTCCAGTGGCTTCTA +
Preference number: 5 (lower is better)
Translates to: AASILLHTDWFSSSNWRSPTSGG*VLQWLL
Trigger: TAGAAGCCACTGGAGGACCAATCCCCCAGAGGTGGG...GCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CTACTCCAACCGATCCCCAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGATTCTTCCAGATCCGTaGGGTTCCCGAGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: LLQPIPRSQLDPELRLCQILPDP*GSRDCA
Trigger: AGCACAGTCTCGGGAACCCAACGGATCTGGAAGAAT...CTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTGGGGATCGGTTGGAGTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCTCTGCCTCCGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTATTCTTCCAGATCCGTaGGGTTCCCGAGACTGTGCT +
Preference number: 5 (lower is better)
Translates to: SLPPPGRPAKHFSPALRPILPDP*GSRDCA
Trigger: AGCACAGTCTCGGGAACCCAACGGATCTGGAAGAAT...AGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCGGAGGCAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATTGGGGATGTCAGACTTaGAGTCAGGGACTCATCCAG +
Preference number: 5 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYWGCQT*SQGLIQ
Trigger: CTGGATGAGTCCCTGACTCAAAGTCTGACATCCCCA...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGCCGCTGGGCCTCCAGTaGCAATGGCTCCAGCCTTTC +
Preference number: 5 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLPLGLQ*QWLQPF
Trigger: GAAAGGCTGGAGCCATTGCAACTGGAGGCCCAGCGG...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCGTCAGCTCACTGCTTTaGTGGCTGGGGTTTCCCACC +
Preference number: 5 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPVSSLL*WLGFPT
Trigger: GGTGGGAAACCCCAGCCACAAAAGCAGTGAGCTGAC...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACTACAACATGCCAGCTTaGGCACAGGGTGGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNYNMPA*AQGGAP
Trigger: AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTA...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS TCA 90 bp GCTCCAAGACGTTCCTCTGAGTCTCCCGATCCTTCTCGAGCTCTCTaGTCTGCTCCCTCTGCACAGTCAGCTTCTGCTCTCGCTCCTGGA +
Preference number: 5 (lower is better)
Translates to: APRRSSESPDPSRAL*SAPSAQSASALAPG
Trigger: TCCAGGAGCGAGAGCAGAAGCTGACTGTGCAGAGGGAGCAGATCAGAGAGCTCGAGAAGGATCGGGAGACTCAGAGGAACGTCTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp CGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACTGCTTGCTaGAGGTGTTCAAGCCTTTGTCTCCATGACTGCTTCTCCATTCCA +
Preference number: 5 (lower is better)
Translates to: RCSLLLSISSRATAC*RCSSLCLHDCFSIP
Trigger: TGGAATGGAGAAGCAGTCATGGAGACAAAGGCTTGAACACCTGCAGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp TGGCGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACTGCTTaGTGCAGGTGTTCAAGCCTTTGTCTCCATGACTGCTTCTCCATT +
Preference number: 5 (lower is better)
Translates to: WRCSLLLSISSRATA*CRCSSLCLHDCFSI
Trigger: AATGGAGAAGCAGTCATGGAGACAAAGGCTTGAACACCTGCAGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp CCAACAACTCTACGGTGTCAACGAGGGGCCGGGAAAGTAACTCGGTaGACAGCGAGTGCAAAAACCGAGAAGCGAATGCAGCTGCGCCTG +
Preference number: 5 (lower is better)
Translates to: PTTLRCQRGAGKVTR*TASAKTEKRMQLRL
Trigger: CAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCCGGCCCCTCGTTGACACCGTAGAGTTGTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS CCA 90 bp GAGCCGCTTTCTCTCGTACTAGGGCCTCCTTCTCCTGGACTGCCCTaGCAAGCACTTCTTCCTGTCGCTTTGCCTCCTGATGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: EPLSLVLGPPSPGLP*QALLPVALPPDVAA
Trigger: AGCAGCTACATCAGGAGGCAAAGCGACAGGAAGAAGTGCTTGCCAGGGCAGTCCAGGAGAAGGAGGCCCTAGTACGAGAGAAAGCGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp GGGCACTCTCTGCCTGGGTCCGTTCTTCTTCCCTCTGGGCCTGGATaGCCTCCATTTCTGTCTGCTGCTCCTTTAGCCTCATTTCCAGCT +
Preference number: 5 (lower is better)
Translates to: GHSLPGSVLLPSGPG*PPFLSAAPLASFPA
Trigger: AGCTGGAAATGAGGCTAAAGGAGCAGCAGACAGAAATGGAGGCCATCCAGGCCCAGAGGGAAGAAGAACGGACCCAGGCAGAGAGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp TGCTGCAGCTGCTGCACATCCTCCTGGTATCGGAGATCCTGGTCCTaGATCTCACCTTCTTGTATCCTCAGAGCCTCCTCCAGCTGCCGA +
Preference number: 5 (lower is better)
Translates to: CCSCCTSSWYRRSWS*ISPSCILRASSSCR
Trigger: TCGGCAGCTGGAGGAGGCTCTGAGGATACAAGAAGGTGAGATCCAGGACCAGGATCTCCGATACCAGGAGGATGTGCAGCAGCTGCAGCA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp AGTGCCTGCTGCAGCTGCTGCACATCCTCCTGGTATCGGAGATCCTaGTCCTGGATCTCACCTTCTTGTATCCTCAGAGCCTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: SACCSCCTSSWYRRS*SWISPSCILRASSS
Trigger: GCTGGAGGAGGCTCTGAGGATACAAGAAGGTGAGATCCAGGACCAGGATCTCCGATACCAGGAGGATGTGCAGCAGCTGCAGCAGGCACT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGCGGTACTGCAGCACCTaGGCCTGCAGCTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: RSLGWEVMVTALTHKARGRYCST*ACSFLT
Trigger: TGTGAGGAAGCTGCAGGCCAAGGTGCTGCAGTACCG...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCTCCAGCTCCTGGGTCTaGGCTAGTAGCAGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGSSSWV*ASSSSS
Trigger: GCTGCTGCTGCTACTAGCCAAGACCCAGGAGCTGGA...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTAGCAGCTCTCGCTCCTaGCTGAGAGAGTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: PALRPPFCCTQTGSPPLTSSSRS*LRESTS
Trigger: AGAGGTGGACTCTCTCAGCAAGGAGCGAGAGCTGCT...AGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp GGATTTGTCCCCGCAGAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGGGTTCTACGACAGCTGCTaGCAGGTGTTCCACCTGGGC +
Preference number: 5 (lower is better)
Translates to: GFVPAESPPPLLFQLGSGFYDSC*QVFHLG
Trigger: GCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAA...CCCAGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTCTGCGGGGACAAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGGTTCTGCTGTGCTGGTaGCACCTGGGCTGTGTAGCC +
Preference number: 5 (lower is better)
Translates to: RSLGWEVMVTALTHKARGVLLCW*HLGCVA
Trigger: GGCTACACAGCCCAGGTGCAACCAGCACAGCAGAAC...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTCCGCAGCTGGACATaGTGGCGCTGCAGCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTLRSWT*WRCSLL
Trigger: GAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAG...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCGTGTGTCTGCCTGGTTaGATCAGCACTTCAGATGGG +
Preference number: 5 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEAVCLPG*ISTSDG
Trigger: CCCATCTGAAGTGCTGATCAAACCAGGCAGACACAC...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCACACATCACACAGCCTaGGCAGAGACTCATCTCTCC +
Preference number: 5 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEATHHTA*AETHLS
Trigger: GGAGAGATGAGTCTCTGCCAAGGCTGTGTGATGTGT...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 90 bp TGCAAAAACCGAGAAGCGAATGCAGCTGCGCCTGGAGAAGGCGGCTaGGAAGCGATACTTCAGCAGGGTCCTGAAGAATGGGAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: CKNREANAAAPGEGG*EAILQQGPEEWELQ
Trigger: CTGGAGCTCCCATTCTTCAGGACCCTGCTGAAGTATCGCTTCTCAGCCGCCTTCTCCAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000461386.5
CDS TCA 90 bp ACCTCCTGCTCCACCAGCCTCTGGGAGTCATCCTGGGCCACCAGCTaGGACTTCAAGTCCTCCACCTGGAAAATTAAGGGCATGAAGACC +
Preference number: 5 (lower is better)
Translates to: TSCSTSLWESSWATS*DFKSSTWKIKGMKT
Trigger: GGTCTTCATGCCCTTAATTTTCCAGGTGGAGGACTTGAAGTCTCAGCTGGTGGCCCAGGATGACTCCCAGAGGCTGGTGGAGCAGGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487467.1
CDS GCA 90 bp CTGTTGAGTCTTCCACAGGTCTTGATGAAGCTTGTGGAGGGCAGATaGTACTGCCTCAGCGGAGAGAGCAGTCAGCAGGGGCCCTCTCTT +
Preference number: 5 (lower is better)
Translates to: LLSLPQVLMKLVEGR*YCLSGESSQQGPSL
Trigger: AAGAGAGGGCCCCTGCTGACTGCTCTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAGCTTCATCAAGACCTGTGGAAGACTCAACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS GCA 90 bp TCCTTCTCGAGCTCTCTGATCTGCTCCCTCTGCACAGTCAGCTTCTaGTCTCGCTCCTGGACGGCCATGGGCAGATGCTCTAAAACAGAC +
Preference number: 5 (lower is better)
Translates to: SFSSSLICSLCTVSF*SRSWTAMGRCSKTD
Trigger: GTCTGTTTTAGAGCATCTGCCCATGGCCGTCCAGGAGCGAGAGCAGAAGCTGACTGTGCAGAGGGAGCAGATCAGAGAGCTCGAGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp CGGGCCACTGCTTGCTGCAGGTGTTCAAGCCTTTGTCTCCATGACTaGTTCTCCATTCCATCAGGACTAGGCTCAGCCTCCACTCCTGAG +
Preference number: 5 (lower is better)
Translates to: RATACCRCSSLCLHD*FSIPSGLGSASTPE
Trigger: CTCAGGAGTGGAGGCTGAGCCTAGTCCTGATGGAATGGAGAAGCAGTCATGGAGACAAAGGCTTGAACACCTGCAGCAAGCAGTGGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp CATAGGGCACTCTCTGCCTGGGTCCGTTCTTCTTCCCTCTGGGCCTaGATGGCCTCCATTTCTGTCTGCTGCTCCTTTAGCCTCATTTCC +
Preference number: 5 (lower is better)
Translates to: HRALSAWVRSSSLWA*MASISVCCSFSLIS
Trigger: GGAAATGAGGCTAAAGGAGCAGCAGACAGAAATGGAGGCCATCCAGGCCCAGAGGGAAGAAGAACGGACCCAGGCAGAGAGTGCCCTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTCATGACCAGAGCCTaGGGCTATATTGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: FSPALRPPFCCTQTGSPPLMTRA*GYIVPF
Trigger: GAAGGGGACAATATAGCCCAAGGCTCTGGTCATGAG...AGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCGGCTTGAGTGACAGTTaGAATCTGGACCTCCAGCTG +
Preference number: 5 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPGLSDS*NLDLQL
Trigger: CAGCTGGAGGTCCAGATTCAAACTGTCACTCAAGCC...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCTGTGGGTGTCGAAGCCTCCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGCGCTGTGCTTTACTaGGGCCCTTCCCTTCCTCTG +
Preference number: 5 (lower is better)
Translates to: AVGVEASRPSVDCNGFIRRAVLY*GPSLPL
Trigger: CAGAGGAAGGGAAGGGCCCAAGTAAAGCACAGCGCG...CCTGATAAAACCATTGCAGTCCACACTAGGTCTGGAGGCTTCGACACCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCAACCCCAGGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCGGGCCACTGCTaGCTGCAGGTGTTCAAGCCT +
Preference number: 5 (lower is better)
Translates to: STPGRTQDTLNATSPLSFQPGHC*LQVFKP
Trigger: AGGCTTGAACACCTGCAGCAAGCAGTGGCCCGGCTG...AAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCCTGGGGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GGCAAAGCCTCAGGCCTGGAAGTCAGCTCACTGCTTTTGTGGCTGGGGTTTCCCTGGCTTGACACATGGTaGGACTACAGGCGACCAGAT +
Preference number: 5 (lower is better)
Translates to: GKASGLEVSSLLLWLGFPWLDTW*DYRRPD
Trigger: ATCTGGTCGCCTGTAGTCCAACCATGTGTCAAGCCA...GGGAAACCCCAGCCACAAAAGCAGTGAGCTGACTTCCAGGCCTGAGGCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGGTCACAGCTAGACCCCGAGCTCCGACTCTGCCAGTCCTGGGCCATGCGTATCAACCAAGAGAAGTCTaGTCTCTGACAACTCCTAGC +
Preference number: 5 (lower is better)
Translates to: QVTARPRAPTLPVLGHAYQPREV*SLTTPS
Trigger: GCTAGGAGTTGTCAGAGACAAGACTTCTCTTGGTTG...ATACGCATGGCCCAGGACTGGCAGAGTCGGAGCTCGGGGTCTAGCTGTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTGAGCAGCAAAGGTCCTaGGGTTGGGAGGTGATGGTC +
Preference number: 5 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPEQQRS*GWEVMV
Trigger: GACCATCACCTCCCAACCCAAGGACCTTTGCTGCTC...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCGTGTCAACATTGATCTaGCCCTCCCTGTGCAGCCTG +
Preference number: 5 (lower is better)
Translates to: LSPSPLIAKPSLGSWTLGVSTLI*PSLCSL
Trigger: CAGGCTGCACAGGGAGGGCAAGATCAATGTTGACAC...GCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACTGGCGCAGACAGCCTTaGGCACTTTGGTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNWRRQP*ALWCQH
Trigger: ATGTTGACACCAAAGTGCCAAAGGCTGTCTGCGCCA...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGGCAGGAGGTGAGGTATaGCAGGGTGGACAGCTGAAG +
Preference number: 5 (lower is better)
Translates to: RSLGWEVMVTALTHKARGAGGEV*QGGQLK
Trigger: CTTCAGCTGTCCACCCTGCAATACCTCACCTCCTGC...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGGAGTCAGCATGCCACTaGCCATGTGCTCTGCCCTGT +
Preference number: 5 (lower is better)
Translates to: RSLGWEVMVTALTHKARGESACH*PCALPC
Trigger: ACAGGGCAGAGCACATGGCAAGTGGCATGCTGACTC...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCGAGTCAGCATGCCACTaGCCATGTGCTCTGCCCTCT +
Preference number: 5 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSESACH*PCALPS
Trigger: AGAGGGCAGAGCACATGGCAAGTGGCATGCTGACTC...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000621352.1
CDS TCA 90 bp TTTTCCTTTGGCAAACCTGTAGGTGTGCGGAGGGGCCATGACCCATaGCACAGTCTTCTGTCTGTGTGCTCCTGGCTGTGGCTGCTACCT +
Preference number: 5 (lower is better)
Translates to: FSFGKPVGVRRGHDP*HSLLSVCSWLWLLP
Trigger: AGGTAGCAGCCACAGCCAGGAGCACACAGACAGAAGACTGTGTCATGGGTCATGGCCCCTCCGCACACCTACAGGTTTGCCAAAGGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp TGCCTCAGTCGTTCCAGTTGTTGGCTGGCATCTGCTAGCTCCTTCTaGGTCTGCAGCAGTGTCTCCAGGAGGGATACTCTCTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: CLSRSSCWLASASSF*VCSSVSRRDTLSFS
Trigger: AGAGAAGGAGAGAGTATCCCTCCTGGAGACACTGCTGCAGACGCAGAAGGAGCTAGCAGATGCCAGCCAACAACTGGAACGACTGAGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp AGTCTTCCACAGGTCTTGATGAAGCTTGTGGAGGGCAGATGCTACTaGCTCAGCGGAGAGAGCAGTCAGCAGGGGCCCTCTCTTAAAGAG +
Preference number: 5 (lower is better)
Translates to: SLPQVLMKLVEGRCY*LSGESSQQGPSLKE
Trigger: CTCTTTAAGAGAGGGCCCCTGCTGACTGCTCTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAGCTTCATCAAGACCTGTGGAAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CCA 90 bp TGCTGTAGTGCCAGCACCTGCTCTTCCAGTACCAGCTGCAGTGACTaGGGCTTCATGTTGTTCAACCCAGGGCTTCTTGTCTCCATGAGG +
Preference number: 5 (lower is better)
Translates to: CCSASTCSSSTSCSD*GFMLFNPGLLVSMR
Trigger: CCTCATGGAGACAAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTCACTGCAGCTGGTACTGGAAGAGCAGGTGCTGGCACTACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000420564.5
ENST00000425934.5
ENST00000446710.5
ENST00000461386.5
CDS CCA 90 bp AGGTCCAGCGTAAGGTGGGTCAAAGCCACTCTCTGGGTTTCCCTCTaGCCCTCCAGCTCCTTGATCAGTTTTTGCTGGCACTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: RSSVRWVKATLWVSL*PSSSLISFCWHSIL
Trigger: CAAGATGGAGTGCCAGCAAAAACTGATCAAGGAGCTGGAGGGCCAGAGGGAAACCCAGAGAGTGGCTTTGACCCACCTTACGCTGGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp CCAGTTGACTCTGAAGTGACTGCTCCTTCAGCTCCCCTTGTTCCCTaGCTTCCTGCAGTTGCTGCTGCAGGACCACTATTTCCTGCTCTC +
Preference number: 5 (lower is better)
Translates to: PVDSEVTAPSAPLVP*LPAVAAAGPLFPAL
Trigger: GAGAGCAGGAAATAGTGGTCCTGCAGCAGCAACTGCAGGAAGCCAGGGAACAAGGGGAGCTGAAGGAGCAGTCACTTCAGAGTCAACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp TCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGGGCTTCATGTaGTTCAACCCAGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: STCKAFLACSAASILLHTDWGFM*FNPGLL
Trigger: AAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTC...TGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACAGCTCTCCAGAGCCTTaGCCAGCTCCTGCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: FILISITLDCQAFPWQLDSSPEP*PAPAGA
Trigger: GGCACCAGCAGGAGCTGGCAAAGGCTCTGGAGAGCT...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TTTTTCAGCTTCAGTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCATTGCAGAGCCTTCCCTaGGGCCACCTTCAGTTCGCC +
Preference number: 5 (lower is better)
Translates to: FFSFSAERAVLRSSSRMPLQSLP*GHLQFA
Trigger: GGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAA...TGGCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CAA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCTCCTGAATCTGTTCTaGCTGCAGATCTACCTCTTG +
Preference number: 5 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTLLNLF*LQIYLL
Trigger: CAAGAGGTAGATCTGCAGCAAGAACAGATTCAGGAG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCTTCCAGGTTGTTCCTTaGCTGGGTCTCCCTCAGCTC +
Preference number: 5 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGFQVVP*LGLPQL
Trigger: GAGCTGAGGGAGACCCAGCAAAGGAACAACCTGGAA...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGTCCATTGGGGAGGTTTaGTGGCTGTGGGGTAAGGCT +
Preference number: 5 (lower is better)
Translates to: RSLGWEVMVTALTHKARGSIGEV*WLWGKA
Trigger: AGCCTTACCCCACAGCCACAAAACCTCCCCAATGGA...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCTAAGGTGCTGGAAGGAGGTGTTCTGCGGACGGTTGAGGAAGGGATGGAGGCCGCAAGCAAATGCAATTaGCCTCATTCCCAGGTGAGT +
Preference number: 5 (lower is better)
Translates to: AKVLEGGVLRTVEEGMEAASKCN*PHSQVS
Trigger: ACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGC...GGCCTCCATCCCTTCCTCAACCGTCCGCAGAACACCTCCTTCCAGCACCTTAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGGGCTCCAGCCTTTCCTaGGTACTGGAACCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWGSSLS*VLEPGV
Trigger: CACCCCTGGTTCCAGTACCAAGGAAAGGCTGGAGCC...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATAGGCTGCATCCTCTTCTaGATCCCTTCCTCCGCTGGG +
Preference number: 5 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIGCILF*IPSSAG
Trigger: CCCAGCGGAGGAAGGGATCAAGAAGAGGATGCAGCC...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACATGTGGAGGGCTCTCTaGGTTTGGAGCACACTGGCA +
Preference number: 5 (lower is better)
Translates to: RTLLGIDPLINPREDTGHMWRAL*VWSTLA
Trigger: TGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACAT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AACACCAAGATGAAGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGATTGCCAAGCCTTCCCTaGGCAGCTGGACCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: NTKMKDSIGHRPLNQPQGLPSLP*AAGPWA
Trigger: AGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAA...TCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCTTCATCTTGGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CAA 90 bp CAGAGGCAATCCTGCTACTGGGCAAGGAAAGTGTACTTTAGAAAGCCGGAGTGGCGGCTCACTGCAGCCTaGACCTTCCAGGTTCAAGCG +
Preference number: 5 (lower is better)
Translates to: QRQSCYWARKVYFRKPEWRLTAA*TFQVQA
Trigger: CGCTTGAACCTGGAAGGTCAAGGCTGCAGTGAGCCG...CCACTCCGGCTTTCTAAAGTACACTTTCCTTGCCCAGTAGCAGGATTGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGGACATCCCTGACACATaGTGGTGCACCAGGTGTCTA +
Preference number: 5 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWDIPDT*WCTRCL
Trigger: TAGACACCTGGTGCACCACAATGTGTCAGGGATGTC...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGCCAGCAGCACTTGCCTATTTCTCCGGGTCTGTaGAGTCTTCCACAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: VLSEPFSGLLPGCQQHLPISPGL*SLPQVL
Trigger: CAAGACCTGTGGAAGACTCAACAGACCCGGAGAAAT...AGGCAAGTGCTGCTGGCATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS TCA 90 bp GCGGTCACTTCCGTTTGCTCTTGCCTCAGTAACTCCCCTTCCAGGTaGCTTGACTCCAGGGCTTCCCGAAGAGTGATCAGTTCACTGAGT +
Preference number: 5 (lower is better)
Translates to: AVTSVCSCLSNSPSR*LDSRASRRVISSLS
Trigger: ACTCAGTGAACTGATCACTCTTCGGGAAGCCCTGGAGTCAAGTCACCTGGAAGGGGAGTTACTGAGGCAAGAGCAAACGGAAGTGACCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397527.6
ENST00000425096.1
ENST00000425934.5
CDS GCA 90 bp AGTCGTTCCAGTTGTTGGCTGGCATCTGCTAGCTCCTTCTGCGTCTaGAGCAGTGTCTCCAGGAGGGATACTCTCTCCTTCTCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: SRSSCWLASASSFCV*SSVSRRDTLSFSVS
Trigger: GGAAACAGAGAAGGAGAGAGTATCCCTCCTGGAGACACTGCTGCAGACGCAGAAGGAGCTAGCAGATGCCAGCCAACAACTGGAACGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp TCTCTGATCTGCTCCCTCTGCACAGTCAGCTTCTGCTCTCGCTCCTaGACGGCCATGGGCAGATGCTCTAAAACAGACCTACACTTCTCT +
Preference number: 5 (lower is better)
Translates to: SLICSLCTVSFCSRS*TAMGRCSKTDLHFS
Trigger: AGAGAAGTGTAGGTCTGTTTTAGAGCATCTGCCCATGGCCGTCCAGGAGCGAGAGCAGAAGCTGACTGTGCAGAGGGAGCAGATCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp CTCCTTTCTTCTAGGTCCAGCGTAAGGTGGGTCAAAGCCACTCTCTaGGTTTCCCTCTGGCCCTCCAGCTCCTTGATCAGTTTTTGCTGG +
Preference number: 5 (lower is better)
Translates to: LLSSRSSVRWVKATL*VSLWPSSSLISFCW
Trigger: CCAGCAAAAACTGATCAAGGAGCTGGAGGGCCAGAGGGAAACCCAGAGAGTGGCTTTGACCCACCTTACGCTGGACCTAGAAGAAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 90 bp TCTCTCTCTTGCCCCAGATTCTGCTTCTCTTGGATCATATTCTCTTaGACCCTCTGGGCCAGAGACTTCTCCAGCAGCTGCTCCCGTTCC +
Preference number: 5 (lower is better)
Translates to: SLSCPRFCFSWIIFS*TLWARDFSSSCSRS
Trigger: GGAACGGGAGCAGCTGCTGGAGAAGTCTCTGGCCCAGAGGGTCCAAGAGAATATGATCCAAGAGAAGCAGAATCTGGGGCAAGAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTAGACAACTTCTCCTCTaGCGCATTCCTACTAAGAGA +
Preference number: 5 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTRQLLL*RIPTKR
Trigger: TCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTCT...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CGCCAGGTCGACCTGCAAAGCATTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTACCTGGGTTATATCCTaGATCACCTGCTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: RQVDLQSISRLLCGLHSATWVIS*ITCCKD
Trigger: GTCTTTACAGCAGGTGATCAAGGATATAACCCAGGT...AGCAGAATGGAGGCCGCAGAGCAGGCGAGAAATGCTTTGCAGGTCGACCTGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTAACTGGAGAAGCTGCTCAAGTTCACAGCCTCTaGACAGCCTGCAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PPFCCTQTGSPPLTGEAAQVHSL*TACKLL
Trigger: CAGCAGCTTGCAGGCTGTCAAGAGGCTGTGAACTTG...AGCAGCTTCTCCAGTTAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCAGCAGCTCTCGCTCCTaGCTGAGAGAGTCCACCTCT +
Preference number: 5 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTSSSRS*LRESTS
Trigger: AGAGGTGGACTCTCTCAGCAAGGAGCGAGAGCTGCT...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGAGTGATTCTGACTGTTaGGCTTCCAGGCCCATCAGC +
Preference number: 5 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLSDSDC*ASRPIS
Trigger: GCTGATGGGCCTGGAAGCCAAACAGTCAGAATCACT...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTCTCTCCAGTAGCTCCTaGGCTGAGCTGAGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: VVPLFILISITLDCQAFPLSSSS*AELSPC
Trigger: ACAGGGGCTCAGCTCAGCCAAGGAGCTACTGGAGAG...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCATTTTTCAGCTTCAGTGCTGAGCGAGCCGTTCTCAGGTCTTCTTCCAGGATGTGTAGTTGGGCTGCCTaGGCTTCCTGGGCCCACAAG +
Preference number: 5 (lower is better)
Translates to: SFFSFSAERAVLRSSSRMCSWAA*ASWAHK
Trigger: CTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACA...CATCCTGGAAGAAGACCTGAGAACGGCTCGCTCAGCACTGAAGCTGAAAAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CAA 90 bp GAGTCTCCACCTCCTCTTCTCTTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATAGTCTTCCACAGGTCTaGATGAAGCTTGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: ESPPPLLFQLGSGSGGPNSLPQV*MKLVEG
Trigger: GCCCTCCACAAGCTTCATCAAGACCTGTGGAAGACT...ATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAGAGAAGAGGAGGTGGAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CAA 90 bp TCCTCTTCTCTTTCAGCTAGGGTCTGGGTCAGGAGGGCCAAATTCTCTTGCAGACTCCAGTTCCTGGATTaGTCCCCGCAGAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: SSSLSARVWVRRAKFSCRLQFLD*SPQSLH
Trigger: GTGGAGACTCTGCGGGGACAAATCCAGGAACTGGAG...TCTGCAAGAGAATTTGGCCCTCCTGACCCAGACCCTAGCTGAAAGAGAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CAA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCATGGATCTGGCTGCTTaGTGCCTGCAGCTCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTMDLAA*CLQLLA
Trigger: AGCCAGGAGCTGCAGGCACAAAGCAGCCAGATCCAT...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTCTGCTGACACTGGCCTaGGTCTGCGCTAGGGAGAGT +
Preference number: 5 (lower is better)
Translates to: VVPLFILISITLDCQAFPLLTLA*VCARES
Trigger: ACTCTCCCTAGCGCAGACCAAGGCCAGTGTCAGCAG...AGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CGCCGGACCTCAGCACTCCCCGGAAACAAGAACATTGCCCAGCCTCTGACGACTCCTCAACAGGAATCTTaGGCAAGTTCTTCCCAGATA +
Preference number: 5 (lower is better)
Translates to: RRTSALPGNKNIAQPLTTPQQES*ASSSQI
Trigger: TATCTGGGAAGAACTTGCCAAAGATTCCTGTTGAGG...AGTCGTCAGAGGCTGGGCAATGTTCTTGTTTCCGGGGAGTGCTGAGGTCCGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATACGTAATCCCAACATTTaGGGAGGCCGAGGTGGGTGG +
Preference number: 5 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIRNPNI*GGRGGW
Trigger: CCACCCACCTCGGCCTCCCAAAATGTTGGGATTACG...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATAGAGGGCTCTCTTGGTTaGGAGCACACTGGCAGCTCT +
Preference number: 5 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYIEGSLG*EHTGSS
Trigger: AGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTC...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACGTGTTCTGCGGACGGTaGAGGAAGGGATGGAGGCCA +
Preference number: 5 (lower is better)
Translates to: FILISITLDCQAFPWQLDVFCGR*RKGWRP
Trigger: TGGCCTCCATCCCTTCCTCAACCGTCCGCAGAACAC...GTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CAA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACTTATCTCCATCACCCTaGATTGCCAAGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNLSPSP*IAKPSL
Trigger: AAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CAA 90 bp TCCCAGGTGAGTTGGGGTCCTCCCCAGGGTTGCAGATTTACTTCCTCTTCCTGGGGAACCAAAAAGCTCTaGCTTTTCTCTCCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: SQVSWGPPQGCRFTSSSWGTKKL*LFSPCL
Trigger: GAGGCAGGGAGAGAAAAGCAAGAGCTTTTTGGTTCC...CCAGGAAGAGGAAGTAAATCTGCAACCCTGGGGAGGACCCCAACTCACCTGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp TCTCCTGACATATGCCAGGTTCTATGCTGGCGTTTTCCAAAACATTaGTCTCATCTTCCCAGCAACCAGACGCTCCCTCTCCCGGACAGC +
Preference number: 5 (lower is better)
Translates to: SPDICQVLCWRFPKH*SHLPSNQTLPLPDS
Trigger: GCTGTCCGGGAGAGGGAGCGTCTGGTTGCTGGGAAGATGAGAGCAATGTTTTGGAAAACGCCAGCATAGAACCTGGCATATGTCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425096.1
CDS CCA 90 bp CTTCCTGTCGCTTTGCCTCCTGATGTAGCTGCTCCAGCTGAGTCGTaGCTGCCTCCTGCTGGTGACGTGACTCACTTAGTTTCTTTTGAA +
Preference number: 5 (lower is better)
Translates to: LPVALPPDVAAPAES*LPPAGDVTHLVSFE
Trigger: TTCAAAAGAAACTAAGTGAGTCACGTCACCAGCAGGAGGCAGCCACGACTCAGCTGGAGCAGCTACATCAGGAGGCAAAGCGACAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCACGGTACTGCAGCACCTaGGCCTGCAGCTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: SNWRSCWFSPTLSNAKASRYCST*ACSFLT
Trigger: TGTGAGGAAGCTGCAGGCCAAGGTGCTGCAGTACCG...TGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp TTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTAGACAACTTCTCCTCTaGCGCATTCCTACTAAGAGA +
Preference number: 5 (lower is better)
Translates to: FSPALRPPFCCTQTGSPPRQLLL*RIPTKR
Trigger: TCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTCT...AGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCCCCTTCCAGGTGACTaGACTCCAGGGCTTCCCGAA +
Preference number: 5 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILPLPGD*TPGLPE
Trigger: TTCGGGAAGCCCTGGAGTCAAGTCACCTGGAAGGGG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCCAGAATCATGTGGAGGGCTCTCTTGGTTTGGAGCACACTGGCAGCTCTTGGGCACTCAGCTCTTGTaGTCGAATAGAGTCAGCTTC +
Preference number: 5 (lower is better)
Translates to: CPESCGGLSWFGAHWQLLGTQLL*SNRVSF
Trigger: GAAGCTGACTCTATTCGACAACAAGAGCTGAGTGCC...CAAGAGCTGCCAGTGTGCTCCAAACCAAGAGAGCCCTCCACATGATTCTGGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCTCCATCACCCTTGCAGGGCACTCAGCTCTaGTTGTCGAATAGAGTCAGC +
Preference number: 5 (lower is better)
Translates to: ASFGTGWCPFSFLSPSPLQGTQL*LSNRVS
Trigger: GCTGACTCTATTCGACAACAAGAGCTGAGTGCCCTG...CAAGGGTGATGGAGATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGTTCTACGACAGCTGCTaGCAGGTGTTCCACCTGGGC +
Preference number: 5 (lower is better)
Translates to: VPLFILISITLDCQAFPWFYDSC*QVFHLG
Trigger: GCCCAGGTGGAACACCTGCAAGCAGCTGTCGTAGAA...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATCTCCAGTTCCTGGATTaGTCCCCGCAGAGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHLQFLD*SPQSLH
Trigger: GTGGAGACTCTGCGGGGACAAATCCAGGAACTGGAG...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGCAGTTGTCACCATTATaGGTGGGACACTCCACAGAG +
Preference number: 5 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLQLSPL*VGHSTE
Trigger: CTCTGTGGAGTGTCCCACCAATAATGGTGACAACTG...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCATTGCTTCTGGATGTACCCCTGGACTCCACACAACCCGTGCATCCAACTGACTTTGGTGTCAACATaGATCTTGCCCTCCCTGTGC +
Preference number: 5 (lower is better)
Translates to: CHCFWMYPWTPHNPCIQLTLVST*ILPSLC
Trigger: GCACAGGGAGGGCAAGATCAATGTTGACACCAAAGT...CAGTTGGATGCACGGGTTGTGTGGAGTCCAGGGGTACATCCAGAAGCAATGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACAGGACACAGGACACATaGAATGCCACCTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RTLLGIDPLINPREDTGHRTQDT*NATSPL
Trigger: AAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCT...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CAA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATTGCCAAGCCTTCCCTaGGCAGCTGGACCCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKLPSLP*AAGPWA
Trigger: AGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTACAACATGCCAGCTTaGGCACAGGGTGGTGCCCCT +
Preference number: 5 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHYNMPA*AQGGAP
Trigger: AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTA...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS-3UTR CAA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCCGCATGCTACCCCCTaGGCTGCTCAACTACCACAC +
Preference number: 5 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILPHATP*AAQLPH
Trigger: GTGTGGTAGTTGAGCAGCCAAGGGGGTAGCATGCGG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp AGCTCCATCAGATCTCTGTCAGTAGCTGACTTCATTTCCAGGAAGTaGCGTCGGAATGTCACAACCTCCCGCCATAGACTGAGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: SSIRSLSVADFISRK*RRNVTTSRHRLRRR
Trigger: TCGCCTTCTCAGTCTATGGCGGGAGGTTGTGACATTCCGACGCCACTTCCTGGAAATGAAGTCAGCTACTGACAGAGATCTGATGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS CCA 90 bp AAACAGCAGACTCCACTGTCAGTAGCTGACTTCATTTCCAGGAAGTaGCGTCGGAATGTCACAACCTCCCGCCATAGACTGAGAAGGCGA +
Preference number: 5 (lower is better)
Translates to: KQQTPLSVADFISRK*RRNVTTSRHRLRRR
Trigger: TCGCCTTCTCAGTCTATGGCGGGAGGTTGTGACATTCCGACGCCACTTCCTGGAAATGAAGTCAGCTACTGACAGTGGAGTCTGCTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465987.1
CDS-3UTR CAA 90 bp TCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTCTATGGTGCTATGAAATGTaGGCTCTGTTGAGTTCAATG +
Preference number: 5 (lower is better)
Translates to: SPALRPPFCCTQTGSPPLWCYEM*ALLSSM
Trigger: CATTGAACTCAACAGAGCCAACATTTCATAGCACCA...TAGAGGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp TTTCTCGCCTGCTCTGCGGCCTCCATTCTGCTGCACACAGACTGGTTCTCCTCCTTAATTCTGTGTGATTaGTCTCCAGGATCTCCACTG +
Preference number: 5 (lower is better)
Translates to: FLACSAASILLHTDWFSSLILCD*SPGSPL
Trigger: CAGTGGAGATCCTGGAGACAAATCACACAGAATTAA...GGAGGAGAACCAGTCTGTGTGCAGCAGAATGGAGGCCGCAGAGCAGGCGAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCAAGTTCACAGCCTCTaGACAGCCTGCAAGCTGCTG +
Preference number: 5 (lower is better)
Translates to: PLFILISITLDCQAFPWQQVHSL*TACKLL
Trigger: CAGCAGCTTGCAGGCTGTCAAGAGGCTGTGAACTTG...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCGCACCTCACTTCCCCTaGGATTACTTCCTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: SSLRYTTCQLWHRVVPLFAPHFP*DYFLGL
Trigger: CAAGCCAAGGAAGTAATCCAAGGGGAAGTGAGGTGC...GAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCAACATCCCGGGTCTGTaGAGTCTTCCACAGGTCTTG +
Preference number: 5 (lower is better)
Translates to: SFLSPSPLIAKPSLGSWTNIPGL*SLPQVL
Trigger: CAAGACCTGTGGAAGACTCAACAGACCCGGGATGTT...GGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATTGCAGAGCCTTCCCTaGGGCCACCTTCAGTTCGCC +
Preference number: 5 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKLQSLP*GHLQFA
Trigger: GGCGAACTGAAGGTGGCCCAAGGGAAGGCTCTGCAA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGCTGGACCCTGGGCTGAACCTGGGACTCAATCATTaGGTCTTTCTTCTCAAGTTC +
Preference number: 5 (lower is better)
Translates to: SITLDCQAFPWQLDPGLNLGLNH*VFLLKF
Trigger: GAACTTGAGAAGAAAGACCAAATGATTGAGTCCCAG...GTTCAGCCCAGGGTCCAGCTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGACTCTATTGGGCATCGACCCCTTAATCAACCCCAGGGAGGACACAGGACACCTCCTTGATCAGTTTTaGCTGGCACTCCATCTTGTG +
Preference number: 5 (lower is better)
Translates to: RTLLGIDPLINPREDTGHLLDQF*LALHLV
Trigger: CACAAGATGGAGTGCCAGCAAAAACTGATCAAGGAG...GTGTCCTGTGTCCTCCCTGGGGTTGATTAAGGGGTCGATGCCCAATAGAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ACCTCCAAGCCCATCCACCTGAGCCAAGGTTCAGGCCCTATAAGGGCATATATATCTCTCAAGGACAGCTaGATCTGTTCCAGGTCCTCC +
Preference number: 5 (lower is better)
Translates to: TSKPIHLSQGSGPIRAYISLKDS*ICSRSS
Trigger: GGAGGACCTGGAACAGATCAAGCTGTCCTTGAGAGA...TATATATGCCCTTATAGGGCCTGAACCTTGGCTCAGGTGGATGGGCTTGGAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTGAAGAAGCCGTGGCCTaGCTGATCTCTAGGGACCCT +
Preference number: 5 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILEEAVA*LISRDP
Trigger: AGGGTCCCTAGAGATCAGCAAGGCCACGGCTTCTTC...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCATTCCCAGGTGAGTaGGGGTCCTCCCCAGGGTTG +
Preference number: 5 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLSFPGE*GSSPGL
Trigger: CAACCCTGGGGAGGACCCCAACTCACCTGGGAATGA...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCTTCTCACTGTGTGCTaGGCAACACCTCCAACCCCA +
Preference number: 5 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGLLTVC*ATPPTP
Trigger: TGGGGTTGGAGGTGTTGCCAAGCACACAGTGAGAAG...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCCAGCACTTTGAGAGGTaGAGGTGGGAGGATCACTTG +
Preference number: 5 (lower is better)
Translates to: IGSKQMQFASFPGELGSSQHFER*RWEDHL
Trigger: CAAGTGATCCTCCCACCTCAACCTCTCAAAGTGCTG...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTATCTCCATCACCCTaGATTGCCAAGCCTTCCCTT +
Preference number: 5 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPLSPSP*IAKPSL
Trigger: AAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAA...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS TCA 90 bp TCCAGCTGGTCTTTGAGCTCCTGGAGTTCATGGATATGCTCCTGCTaGCATTCCACCTCCTTCTCCTTATCACGCAGGATCAGCTTCATG +
Preference number: 5 (lower is better)
Translates to: SSWSLSSWSSWICSC*HSTSFSLSRRISFM
Trigger: CATGAAGCTGATCCTGCGTGATAAGGAGAAGGAGGTGGAATGTCAGCAGGAGCATATCCATGAACTCCAGGAGCTCAAAGACCAGCTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 90 bp ATCCCAGTGGTCTCCTGCTCCTTTAATTTCTGGACTTTCATGTCCTaGCTCAGTCGTTCCAGTTGTTGGCTGGCATCTGCTAGCTCCTTC +
Preference number: 5 (lower is better)
Translates to: IPVVSCSFNFWTFMS*LSRSSCWLASASSF
Trigger: GAAGGAGCTAGCAGATGCCAGCCAACAACTGGAACGACTGAGGCAGGACATGAAAGTCCAGAAATTAAAGGAGCAGGAGACCACTGGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 90 bp TTTAATTTCTGGACTTTCATGTCCTGCCTCAGTCGTTCCAGTTGTTaGCTGGCATCTGCTAGCTCCTTCTGCGTCTGCAGCAGTGTCTCC +
Preference number: 5 (lower is better)
Translates to: FNFWTFMSCLSRSSC*LASASSFCVCSSVS
Trigger: GGAGACACTGCTGCAGACGCAGAAGGAGCTAGCAGATGCCAGCCAACAACTGGAACGACTGAGGCAGGACATGAAAGTCCAGAAATTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GGGAGGACACAGGACACATTGAATGCCACCTCTCCTCTTAGCTTTCAGCCCAGCTCTACCTTCCTACTTTaGCTAAGGATCAGACAGGGA +
Preference number: 5 (lower is better)
Translates to: GRTQDTLNATSPLSFQPSSTFLL*LRIRQG
Trigger: TCCCTGTCTGATCCTTAGCAAAAGTAGGAAGGTAGA...GCTGGGCTGAAAGCTAAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGGACTGGGGCTTCATGTaGTTCAACCCAGGGCTTCTT +
Preference number: 5 (lower is better)
Translates to: VPLFILISITLDCQAFPWDWGFM*FNPGLL
Trigger: AAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTC...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGGTCCTTGGGTTGGGAGGTGATGGTCACTGCTCTAACACACAAAGCACGTGGGACCTGGGTTATATCCTaGATCACCTGCTGTAAAGAC +
Preference number: 5 (lower is better)
Translates to: RSLGWEVMVTALTHKARGTWVIS*ITCCKD
Trigger: GTCTTTACAGCAGGTGATCAAGGATATAACCCAGGT...CCCACGTGCTTTGTGTGTTAGAGCAGTGACCATCACCTCCCAACCCAAGGACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCTTCTTCCTGTCGCTTaGCCTCCTGATGTAGCTGCT +
Preference number: 5 (lower is better)
Translates to: VPLFILISITLDCQAFPWLLPVA*PPDVAA
Trigger: AGCAGCTACATCAGGAGGCAAAGCGACAGGAAGAAG...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGAGTCTTCCACAGGTCTaGATGAAGCTTGTGGAGGGC +
Preference number: 5 (lower is better)
Translates to: VPLFILISITLDCQAFPWSLPQV*MKLVEG
Trigger: GCCCTCCACAAGCTTCATCAAGACCTGTGGAAGACT...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTTGCTCCAGCTGGTCTTaGAGCTCCTGGAGTTCATGG +
Preference number: 5 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILCSSWS*SSWSSW
Trigger: CCATGAACTCCAGGAGCTCAAAGACCAGCTGGAGCA...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TTGTCACCATTATTGGTGGGACACTCCACAGAGGCAATCCTGCTACTGGGCAAGCTGTGGACAGGGGCTTaGTCTTGTGTGTTCTCTGTA +
Preference number: 5 (lower is better)
Translates to: LSPLLVGHSTEAILLLGKLWTGA*SCVFSV
Trigger: TACAGAGAACACACAAGACAAAGCCCCTGTCCACAG...CTTGCCCAGTAGCAGGATTGCCTCTGTGGAGTGTCCCACCAATAATGGTGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTCCACTGCACTCCAGCTaGGAAGACAGGACAAAACCC +
Preference number: 5 (lower is better)
Translates to: LRYTTCQLWHRVVPLFILPLHSS*EDRTKP
Trigger: GGGTTTTGTCCTGTCTTCCAAGCTGGAGTGCAGTGG...AAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAGTCCAAGATGCTCTGTTaGACTCTCCCTGGCCTCACT +
Preference number: 5 (lower is better)
Translates to: PLFILISITLDCQAFPWQSKMLC*TLPGLT
Trigger: AGTGAGGCCAGGGAGAGTCAAACAGAGCATCTTGGA...CTGCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTCATTTAAGGCACTGTCGACAGCTCTGCAATaGACTGCTCTGCAGACGCTC +
Preference number: 5 (lower is better)
Translates to: SCWFSPTLSNAKASFKALSTALQ*TALQTL
Trigger: GAGCGTCTGCAGAGCAGTCAATTGCAGAGCTGTCGA...CAGTGCCTTAAATGAGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp CAGCTCCTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTCACAGAATTTTGTTGTaGGGCTTCAAACAGACTGCT +
Preference number: 5 (lower is better)
Translates to: QLLSQIYNMPALAQGGAPHRILL*GFKQTA
Trigger: AGCAGTCTGTTTGAAGCCCAACAACAAAATTCTGTG...AGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAGGAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AACTCAGAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAACCTCCAGCTGCCCCTaGGTGACCTCTATCACAGAA +
Preference number: 5 (lower is better)
Translates to: NSETLTLAKGQRCVFEAPTSSCP*VTSITE
Trigger: TTCTGTGATAGAGGTCACCAAGGGGCAGCTGGAGGT...TGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTCTGAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATGGCCCTCCAGCTCCTaGATCAGTTTTTGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: SDIQHASFGTGWCPFSFLWPSSS*ISFCWH
Trigger: GTGCCAGCAAAAACTGATCAAGGAGCTGGAGGGCCA...TAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTCAGGACCCCATGTTTTaGCCCTTCATCCTCCCTTGC +
Preference number: 5 (lower is better)
Translates to: AQRSNLNEWITPAIASGCQDPMF*PFILPC
Trigger: GCAAGGGAGGATGAAGGGCAAAAACATGGGGTCCTG...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATGGAACCAAAAAGCTCTaGCTTTTCTCTCCCTGCCTC +
Preference number: 5 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHGTKKL*LFSPCL
Trigger: GAGGCAGGGAGAGAAAAGCAAGAGCTTTTTGGTTCC...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS TCA 90 bp TCCAGGGCCAGGCATTCCAGAGTAACCAACTGCTTTTTCAGGTCCTaGACCTGTCCTCTCTGGGACTCAATCATTTGGTCTTTCTTCTCA +
Preference number: 5 (lower is better)
Translates to: SRARHSRVTNCFFRS*TCPLWDSIIWSFFS
Trigger: TGAGAAGAAAGACCAAATGATTGAGTCCCAGAGAGGACAGGTTCAGGACCTGAAAAAGCAGTTGGTTACTCTGGAATGCCTGGCCCTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS-3UTR CAA 90 bp CCAGACCTAGTGTGGACTGCAATGGTTTTATCAGGCGGTATGACCAGTGGGGGCGAAATGTTGGCTCTGTaGAGTTCAATGAAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PDLVWTAMVLSGGMTSGGEMLAL*SSMKLN
Trigger: ATTGAGCTTCATTGAACTCAACAGAGCCAACATTTC...GCCCCCACTGGTCATACCGCCTGATAAAACCATTGCAGTCCACACTAGGTCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GCTCAGAGGTCTAACCTGAATGAATGGATAACACCTGCCATTGCTTCTGGATGTCTCATGACCAGAGCCTaGGGCTATATTGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: AQRSNLNEWITPAIASGCLMTRA*GYIVPF
Trigger: GAAGGGGACAATATAGCCCAAGGCTCTGGTCATGAG...ACATCCAGAAGCAATGGCAGGTGTTATCCATTCATTCAGGTTAGACCTCTGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ATTCACCATTCTGGTTATACCCTGCCACATGTGACAAGGTCAGGAAAGGAGGCTTTGGATCATATTCTCTaGGACCCTCTGGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: IHHSGYTLPHVTRSGKEALDHIL*DPLGQR
Trigger: TCTCTGGCCCAGAGGGTCCAAGAGAATATGATCCAA...AGCCTCCTTTCCTGACCTTGTCACATGTGGCAGGGTATAACCAGAATGGTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCGTCAACGCTGTGTTTTaGAGGCCCCAGAACTTCTTT +
Preference number: 5 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGVNAVF*RPQNFF
Trigger: AAAGAAGTTCTGGGGCCTCAAAAACACAGCGTTGAC...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGTTCACTAAGCATCTGTaGCTGAGCTGCATGTGTAGG +
Preference number: 5 (lower is better)
Translates to: VPLFILISITLDCQAFPWFTKHL*LSCMCR
Trigger: CCTACACATGCAGCTCAGCAACAGATGCTTAGTGAA...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CAGTTCCAGCTGATATGCCCAGGAAGCGACATCTCAAGGACATTCACCCAGAGTACAGCCTTTGGCACTTaGGTGTCAACATTGATCTTG +
Preference number: 5 (lower is better)
Translates to: QFQLICPGSDISRTFTQSTAFGT*VSTLIL
Trigger: CAAGATCAATGTTGACACCAAAGTGCCAAAGGCTGT...ACTCTGGGTGAATGTCCTTGAGATGTCGCTTCCTGGGCATATCAGCTGGAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTCTCTCAGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATCCTCTGAAGAGGAGTTaGAGAAGAATGAGGTGGGAA +
Preference number: 5 (lower is better)
Translates to: LSQIYNMPALAQGGAPFHPLKRS*RRMRWE
Trigger: TTCCCACCTCATTCTTCTCAAACTCCTCTTCAGAGG...ATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCTGAGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 90 bp GCCATGGGCAGATGCTCTAAAACAGACCTACACTTCTCTAGCTCCTaGATCTGTTCTTGCTGCAGATCTACCTCTTGGTTCCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: AMGRCSKTDLHFSSS*ICSCCRSTSWFLFF
Trigger: GAAGAAGAGGAACCAAGAGGTAGATCTGCAGCAAGAACAGATTCAGGAGCTAGAGAAGTGTAGGTCTGTTTTAGAGCATCTGCCCATGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp ATAGGGAGCAAGCAAATGCAATTTGCCTCATTCCCAGGTGAGTTGGGGTCCTCCTGGTGCTATGAAATGTaGGCTCTGTTGAGTTCAATG +
Preference number: 5 (lower is better)
Translates to: IGSKQMQFASFPGELGSSWCYEM*ALLSSM
Trigger: CATTGAACTCAACAGAGCCAACATTTCATAGCACCA...GGAGGACCCCAACTCACCTGGGAATGAGGCAAATTGCATTTGCTTGCTCCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTTCTTCCTTCTCTTCTaGGATGTCCCTGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGFFLLF*DVPEIC
Trigger: GCAGATCTCAGGGACATCCAAGAAGAGAAGGAAGAA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GAGACTCTGACTTTAGCTAAAGGTCAACGCTGTGTTTTTGAGGCCCCAGAACTTGAGATTGTTCCTCCATaGGGGAGGTTTTGTGGCTGT +
Preference number: 5 (lower is better)
Translates to: ETLTLAKGQRCVFEAPELEIVPP*GRFCGC
Trigger: ACAGCCACAAAACCTCCCCAATGGAGGAACAATCTC...AAGTTCTGGGGCCTCAAAAACACAGCGTTGACCTTTAGCTAAAGTCAGAGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCGACAGGGGCTTTGTCTaGTGTGTTCTCTGTAACCCT +
Preference number: 5 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIDRGFV*CVLCNP
Trigger: AGGGTTACAGAGAACACACAAGACAAAGCCCCTGTC...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCAGGACACAGGACACATaGAATGCCACCTCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIRTQDT*NATSPL
Trigger: AAGAGGAGAGGTGGCATTCAATGTGTCCTGTGTCCT...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000621352.1
CDS GCA 90 bp GCCATAGTTTCATGTAGTTCCATCAGCTCAGATTCTAGGGAGTTCTaGTTTCCTTCCCACTTAGATTTCTCCGGGTCTGTTGAGTCTTCC +
Preference number: 5 (lower is better)
Translates to: AIVSCSSISSDSREF*FPSHLDFSGSVESS
Trigger: GGAAGACTCAACAGACCCGGAGAAATCTAAGTGGGAAGGAAAGCAGAACTCCCTAGAATCTGAGCTGATGGAACTACATGAAACTATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425525.1
CDS-3UTR CAA 90 bp TGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCCAGATTCTGCTTCTCTaGGATCATATTCTCTTGGAC +
Preference number: 5 (lower is better)
Translates to: CPFSFLSPSPLIAKPSLGQILLL*DHILLD
Trigger: GTCCAAGAGAATATGATCCAAGAGAAGCAGAATCTG...GCCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp GTGCCCCTTTTCATTCTTATCTCCATCACCCTTGATTGCCAAGCCTTCCCTTGGCAAGTACAAGAACACTaGGACATTAGATTTGCGGCA +
Preference number: 5 (lower is better)
Translates to: VPLFILISITLDCQAFPWQVQEH*DIRFAA
Trigger: TGCCGCAAATCTAATGTCCAAGTGTTCTTGTACTTG...CCAAGGGAAGGCTTGGCAATCAAGGGTGATGGAGATAAGAATGAAAAGGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp TTGTCCCCTTCTTCCACCATGACCTGGGTTATATCCTTGATCACCTaGTGTAAAGACAACTTCTCCTCTTGCGCATTCCTACTAAGAGAT +
Preference number: 5 (lower is better)
Translates to: LSPSSTMTWVISLIT*CKDNFSSCAFLLRD
Trigger: ATCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATATAACCCAGGTCATGGTGGAAGAAGGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS-3UTR CAA 90 bp CCTCTAACTGGAGAAGCTGCTGGTTCAGCCCAACTTTATCTAACGCCAAAGCCTGAAATGTTGGCTCTGTaGAGTTCAATGAAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PLTGEAAGSAQLYLTPKPEMLAL*SSMKLN
Trigger: ATTGAGCTTCATTGAACTCAACAGAGCCAACATTTC...AGGCTTTGGCGTTAGATAAAGTTGGGCTGAACCAGCAGCTTCTCCAGTTAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS-3UTR CAA 90 bp AGATATACAACATGCCAGCTTTGGCACAGGGTGGTGCCCCTTTTCATTCTTATCATCCTTCTGATTGGCTaGACACATGGTTGGACTACA +
Preference number: 5 (lower is better)
Translates to: RYTTCQLWHRVVPLFILIILLIG*THGWTT
Trigger: TGTAGTCCAACCATGTGTCAAGCCAATCAGAAGGAT...GATAAGAATGAAAAGGGGCACCACCCTGTGCCAAAGCTGGCATGTTGTATATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAACTGGGCCATGCGTATTaGGAATATAGGATAACCATC +
Preference number: 5 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKLGHAY*EYRITI
Trigger: GATGGTTATCCTATATTCCAAATACGCATGGCCCAG...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp CTTTCCAGCCAGTACCAGCTTCTATCAAAGCAGACAAGATTAGGAAGGGGGAAATTAATTCTGTGTGATTaGTCTCCAGGATCTCCACTG +
Preference number: 5 (lower is better)
Translates to: LSSQYQLLSKQTRLGRGKLILCD*SPGSPL
Trigger: CAGTGGAGATCCTGGAGACAAATCACACAGAATTAA...TTTCCCCCTTCCTAATCTTGTCTGCTTTGATAGAAGCTGGTACTGGCTGGAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS-3UTR CAA 90 bp TGGGTCTCTTCTGCACAACTGGGTCATTCTGCAAACTTTCATCTGTGTCCAGGTTATCACAGAATTTTGTaGTTGGGCTTCAAACAGACT +
Preference number: 5 (lower is better)
Translates to: WVSSAQLGHSANFHLCPGYHRIL*LGFKQT
Trigger: AGTCTGTTTGAAGCCCAACAACAAAATTCTGTGATA...ACCTGGACACAGATGAAAGTTTGCAGAATGACCCAGTTGTGCAGAAGAGACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 90 bp TGGGTTATATCCTTGATCACCTGCTGTAAAGACAACTTCTCCTCTTaGGCATTCCTACTAAGAGATGCTTCATGTTCCATTAATTCTGTG +
Preference number: 5 (lower is better)
Translates to: WVISLITCCKDNFSS*AFLLRDASCSINSV
Trigger: CACAGAATTAATGGAACATGAAGCATCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATATAACCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS TCA 72 bp CGACTGGAGCTTAGCGTGCTGGCGGCAGCAAGAAGCTaGGGCAAGCGGGCCCCGGGCCCTAACGACGCGTCC +
Preference number: 6 (lower is better)
Translates to: RLELSVLAAARS*GKRAPGPNDAS
Trigger: GGACGCGTCGTTAGGGCCCGGGGCCCGCTTGCCTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS GCA 72 bp CTCACCACGCTCGGCTCCCGCAGACGCCCGGCTAGTTaGTCCGCGATTGAGCTGCGGCAGCCGCTGCTAAGG +
Preference number: 6 (lower is better)
Translates to: LTTLGSRRRPAS*SAIELRQPLLR
Trigger: CCTTAGCAGCGGCTGCCGCAGCTCAATCGCGGAGCAACTAGCCGGGCGTCTGCGGGAGCCGAGCGTGGTGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446710.5
CDS GCA 72 bp TGGGCCTCGGGTTCCTCCCGGGTAACAAGAGGCCGCTaGCCGAACGGGATTCCCTCAGGCGCCCTAGACGGG +
Preference number: 6 (lower is better)
Translates to: WASGSSRVTRGR*PNGIPSGALDG
Trigger: CCCGTCTAGGGCGCCTGAGGGAATCCCGTTCGGGCAGCGGCCTCTTGTTACCCGGGAGGAACCCGAGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS CCA 72 bp AAGCTCTCCTTCGGCGCCGACTGGAGCTTAGCGTGCTaGCGGCAGCAAGAAGCTGAGGCAAGCGGGCCCCGG +
Preference number: 6 (lower is better)
Translates to: KLSFGADWSLAC*RQQEAEASGPR
Trigger: CCGGGGCCCGCTTGCCTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCGGCGCCGAAGGAGAGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS GCA 72 bp GCTGAGCTGAGCCCCTGTAGTTGTTCAGCGAGGTCCTaGCGGTCACGCTCCACGGCCTGCAGCCGCACCTCT +
Preference number: 6 (lower is better)
Translates to: AELSPCSCSARS*RSRSTACSRTS
Trigger: AGAGGTGCGGCTGCAGGCCGTGGAGCGTGACCGGCAGGACCTCGCTGAACAACTACAGGGGCTCAGCTCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp CGCAGTCGCAGCTGTAGTTGGGCTGCCTTGGCTTCCTaGGCCCACAAGGAGGCTCGCAGCTGCTGCTCCGTG +
Preference number: 6 (lower is better)
Translates to: RSRSCSWAALAS*AHKEARSCCSV
Trigger: CACGGAGCAGCAGCTGCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CAA 90 bp AGCTGGCTCTCTGTGCTGCGCAGTCGCAGCTGTAGTTGGGCTGCCTaGGCTTCCTGGGCCCACAAGGAGGCTCGCAGCTGCTGCTCCGTG +
Preference number: 6 (lower is better)
Translates to: SWLSVLRSRSCSWAA*ASWAHKEARSCCSV
Trigger: CACGGAGCAGCAGCTGCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CAA 90 bp GCTGCACACCCTGCTCCCCTCTGGACCCCAGTTCTGCTGTGCTGGTaGCACCTGGGCTGTGTAGCCGCTCCTTCTCCAGAGCCCGTCTGG +
Preference number: 6 (lower is better)
Translates to: AAHPAPLWTPVLLCW*HLGCVAAPSPEPVW
Trigger: CCAGACGGGCTCTGGAGAAGGAGCGGCTACACAGCCCAGGTGCAACCAGCACAGCAGAACTGGGGTCCAGAGGGGAGCAGGGTGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp CTGTGCTGCGCAGTCGCAGCTGTAGTTGGGCTGCCTTaGCTTCCTGGGCCCACAAGGAGGCTCGCAGCTGCT +
Preference number: 6 (lower is better)
Translates to: LCCAVAAVVGLP*LPGPTRRLAAA
Trigger: AGCAGCTGCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CCA 72 bp TTCCCGGGCTGCTGCTCTGCGGCCAGCGCTTCTAGCTaGCTCTCTGTGCTGCGCAGTCGCAGCTGTAGTTGG +
Preference number: 6 (lower is better)
Translates to: FPGCCSAASASS*LSVLRSRSCSW
Trigger: CCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGCCGCAGAGCAGCAGCCCGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CCA 72 bp GACACGAGGGTCGGGAAGCTCTCCTTCGGCGCCGACTaGAGCTTAGCGTGCTGGCGGCAGCAAGAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: DTRVGKLSFGAD*SLACWRQQEAE
Trigger: CTCAGCTTCTTGCTGCCGCCAGCACGCTAAGCTCCAGTCGGCGCCGAAGGAGAGCTTCCCGACCCTCGTGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS CAA 72 bp TCTGTGCTGCGCAGTCGCAGCTGTAGTTGGGCTGCCTaGGCTTCCTGGGCCCACAAGGAGGCTCGCAGCTGC +
Preference number: 6 (lower is better)
Translates to: SVLRSRSCSWAA*ASWAHKEARSC
Trigger: GCAGCTGCGAGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CAA 72 bp CTCCCATCCTGCTGTGTGGGTGAAGAAGCCGTGGCCTaGCTGATCTCTAGGGACCCTGCCTGGGCCGCACGC +
Preference number: 6 (lower is better)
Translates to: LPSCCVGEEAVA*LISRDPAWAAR
Trigger: GCGTGCGGCCCAGGCAGGGTCCCTAGAGATCAGCAAGGCCACGGCTTCTTCACCCACACAGCAGGATGGGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 90 bp GCTGCCGACTGTGTGCCTGGCAGGCATCCAGGGAGGCTTGCAGGGTaGCAGTGCTGGCCTCCAGACTGCGGCTCAATTCTGCCTGCTCGA +
Preference number: 6 (lower is better)
Translates to: AADCVPGRHPGRLAG*QCWPPDCGSILPAR
Trigger: TCGAGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTCGGCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 90 bp CTCCTCCAGCTGCCGACTGTGTGCCTGGCAGGCATCCAGGGAGGCTaGCAGGGTTGCAGTGCTGGCCTCCAGACTGCGGCTCAATTCTGC +
Preference number: 6 (lower is better)
Translates to: LLQLPTVCLAGIQGG*QGCSAGLQTAAQFC
Trigger: GCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTCGGCAGCTGGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS TCA 72 bp GCCCACAAGGAGGCTCGCAGCTGCTGCTCCGTGATATaGGACGCCTCCAGCTCCTCCAGCAGCTGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: AHKEARSCCSVI*DASSSSSSCAS
Trigger: GGAAGCACAGCTGCTGGAGGAGCTGGAGGCGTCTCATATCACGGAGCAGCAGCTGCGAGCCTCCTTGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 72 bp CATCCTGCTGTGTGGGTGAAGAAGCCGTGGCCTTGCTaGTCTCTAGGGACCCTGCCTGGGCCGCACGCATGG +
Preference number: 6 (lower is better)
Translates to: HPAVWVKKPWPC*SLGTLPGPHAW
Trigger: CCATGCGTGCGGCCCAGGCAGGGTCCCTAGAGATCAGCAAGGCCACGGCTTCTTCACCCACACAGCAGGATG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 72 bp TGCCCTGCCAGAGTGTCCCGCTCCCCAGTGAGCTTCTaGAGCCGCTGTCTCAAGGCTTTGCCCTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: CPARVSRSPVSF*SRCLKALPSSS
Trigger: GGAGGAAGAGGGCAAAGCCTTGAGACAGCGGCTGCAGAAGCTCACTGGGGAGCGGGACACTCTGGCAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS GCA 72 bp AGAGTCCACCTCTCCCTGGAGGTCCACAGTCTGCCCTaGCAGAGTGTCCCGCTCCCCAGTGAGCTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: RVHLSLEVHSLP*QSVPLPSELLQ
Trigger: CTGCAGAAGCTCACTGGGGAGCGGGACACTCTGGCAGGGCAGACTGTGGACCTCCAGGGAGAGGTGGACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS GCA 72 bp TTGGAGGGCAGCAAGGTCATCTCTGTGCTGCCGGGCTaGCTCCTTCAGCTCCCGTTGAGCCTCCTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: LEGSKVISVLPG*LLQLPLSLLEL
Trigger: CAGCTCCAGGAGGCTCAACGGGAGCTGAAGGAGGCAGCCCGGCAGCACAGAGATGACCTTGCTGCCCTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 72 bp GCTCTGCGGCCAGCGCTTCTAGCTGGCTCTCTGTGCTaGGCAGTCGCAGCTGTAGTTGGGCTGCCTTGGCTT +
Preference number: 6 (lower is better)
Translates to: ALRPALLAGSLC*AVAAVVGLPWL
Trigger: AAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCTAGAAGCGCTGGCCGCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS GCA 72 bp CCTGGCAGGCATCCAGGGAGGCTTGCAGGGTTGCAGTaGTGGCCTCCAGACTGCGGCTCAATTCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: PGRHPGRLAGLQ*WPPDCGSILPA
Trigger: AGCAGGCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp GTGTGCCTGGCAGGCATCCAGGGAGGCTTGCAGGGTTaGAGTGCTGGCCTCCAGACTGCGGCTCAATTCTGC +
Preference number: 6 (lower is better)
Translates to: VCLAGIQGGLQG*SAGLQTAAQFC
Trigger: GCAGAATTGAGCCGCAGTCTGGAGGCCAGCACTGCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp GGGCCGGCTCCCGCCCATCCATTCTTCCAGATCCGTTaGGTTCCCGAGACTGTGCTCCCACAGTCAAGCGCA +
Preference number: 6 (lower is better)
Translates to: GPAPAHPFFQIR*VPETVLPQSSA
Trigger: TGCGCTTGACTGTGGGAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAATGGATGGGCGGGAGCCGGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS CCA 72 bp AGCTCTCGCTCCTTGCTGAGAGAGTCCACCTCTCCCTaGAGGTCCACAGTCTGCCCTGCCAGAGTGTCCCGC +
Preference number: 6 (lower is better)
Translates to: SSRSLLRESTSP*RSTVCPARVSR
Trigger: GCGGGACACTCTGGCAGGGCAGACTGTGGACCTCCAGGGAGAGGTGGACTCTCTCAGCAAGGAGCGAGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS CCA 72 bp AGCTGGCTCTCTGTGCTGCGCAGTCGCAGCTGTAGTTaGGCTGCCTTGGCTTCCTGGGCCCACAAGGAGGCT +
Preference number: 6 (lower is better)
Translates to: SWLSVLRSRSCS*AALASWAHKEA
Trigger: AGCCTCCTTGTGGGCCCAGGAAGCCAAGGCAGCCCAACTACAGCTGCGACTGCGCAGCACAGAGAGCCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS CAA 72 bp TGGGCCGGCTCCCGCCCATCCATTCTTCCAGATCCGTaGGGTTCCCGAGACTGTGCTCCCACAGTCAAGCGC +
Preference number: 6 (lower is better)
Translates to: WAGSRPSILPDP*GSRDCAPTVKR
Trigger: GCGCTTGACTGTGGGAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAATGGATGGGCGGGAGCCGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS CAA 72 bp CCTGCTCCCCTCTGGACCCCAGTTCTGCTGTGCTGGTaGCACCTGGGCTGTGTAGCCGCTCCTTCTCCAGAG +
Preference number: 6 (lower is better)
Translates to: PAPLWTPVLLCW*HLGCVAAPSPE
Trigger: CTCTGGAGAAGGAGCGGCTACACAGCCCAGGTGCAACCAGCACAGCAGAACTGGGGTCCAGAGGGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 72 bp GACCAACAGCCACCTGTGAACCCTCCCAGCCTGGGATaGCGGCTACTGGACACGAGGGTCGGGAAGCTCTCC +
Preference number: 6 (lower is better)
Translates to: DQQPPVNPPSLG*RLLDTRVGKLS
Trigger: GGAGAGCTTCCCGACCCTCGTGTCCAGTAGCCGCAATCCCAGGCTGGGAGGGTTCACAGGTGGCTGTTGGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476146.5
CDS CAA 90 bp GCTTGCAGCAGGACCACCTGCTCCAAGGTACTCCGCAGCTGGACATaGTGGCGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACT +
Preference number: 6 (lower is better)
Translates to: ACSRTTCSKVLRSWT*WRCSLLLSISSRAT
Trigger: AGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGTCCTGCTGCAAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422671.1
CDS CAA 90 bp AGCAGCAGCTGGGCCGGCTCCCGCCCATCCATTCTTCCAGATCCGTaGGGTTCCCGAGACTGTGCTCCCACAGTCAAGCGCAGACAACAG +
Preference number: 6 (lower is better)
Translates to: SSSWAGSRPSILPDP*GSRDCAPTVKRRQQ
Trigger: CTGTTGTCTGCGCTTGACTGTGGGAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAATGGATGGGCGGGAGCCGGCCCAGCTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS TCA 72 bp TCTCTGTGCTGCCGGGCTGCCTCCTTCAGCTCCCGTTaGGCCTCCTGGAGCTGGGTCTGTAGTATCCCAGTG +
Preference number: 6 (lower is better)
Translates to: SLCCRAASFSSR*ASWSWVCSIPV
Trigger: CACTGGGATACTACAGACCCAGCTCCAGGAGGCTCAACGGGAGCTGAAGGAGGCAGCCCGGCAGCACAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS TCA 72 bp TTCCCTTCCTCTGCCCGTTCCTGCATCAGCTGCCTCTaGGTGGTCAGCTCCCGGCCTCGCTCTCTCAAGGAC +
Preference number: 6 (lower is better)
Translates to: FPSSARSCISCL*VVSSRPRSLKD
Trigger: GTCCTTGAGAGAGCGAGGCCGGGAGCTGACCACTCAGAGGCAGCTGATGCAGGAACGGGCAGAGGAAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS TCA 72 bp GGGTGTAGCAGGACTGGCCCTGGGGATGTCAGACTTTaGGTCAGGGACTCATCCAGCCTGCGGGTCTCTGCC +
Preference number: 6 (lower is better)
Translates to: GCSRTGPGDVRL*VRDSSSLRVSA
Trigger: GGCAGAGACCCGCAGGCTGGATGAGTCCCTGACTCAAAGTCTGACATCCCCAGGGCCAGTCCTGCTACACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp TTGTATCCTCAGAGCCTCCTCCAGCTGCCGACTGTGTaGCTGGCAGGCATCCAGGGAGGCTTGCAGGGTTGC +
Preference number: 6 (lower is better)
Translates to: LYPQSLLQLPTV*LAGIQGGLQGC
Trigger: GCAACCCTGCAAGCCTCCCTGGATGCCTGCCAGGCACACAGTCGGCAGCTGGAGGAGGCTCTGAGGATACAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp AGGTACTCCGCAGCTGGACATTGTGGCGCTGCAGCCTaGTCCTGTCAATCTCCAGCCGGGCCACTGCTTGCT +
Preference number: 6 (lower is better)
Translates to: RYSAAGHCGAAA*SCQSPAGPLLA
Trigger: AGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp TGCTCCAAGGTACTCCGCAGCTGGACATTGTGGCGCTaGAGCCTGCTCCTGTCAATCTCCAGCCGGGCCACT +
Preference number: 6 (lower is better)
Translates to: CSKVLRSWTLWR*SLLLSISSRAT
Trigger: AGTGGCCCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp GGTCCTCCAGTGGCTTCTAGCCGCTTCTCCAGCTCTTaGCACCAGCTTCGGTACTGCAGCACCTTGGCCTGC +
Preference number: 6 (lower is better)
Translates to: GPPVASSRFSSS*HQLRYCSTLAC
Trigger: GCAGGCCAAGGTGCTGCAGTACCGAAGCTGGTGCCAAGAGCTGGAGAAGCGGCTAGAAGCCACTGGAGGACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000420564.5
ENST00000425934.5
ENST00000446710.5
ENST00000461386.5
CDS CCA 72 bp CTTCCTCTGCCCGTTCCTGCATCAGCTGCCTCTGAGTaGTCAGCTCCCGGCCTCGCTCTCTCAAGGACAGCT +
Preference number: 6 (lower is better)
Translates to: LPLPVPASAASE*SAPGLALSRTA
Trigger: AGCTGTCCTTGAGAGAGCGAGGCCGGGAGCTGACCACTCAGAGGCAGCTGATGCAGGAACGGGCAGAGGAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp TCCACCTGCTCCAAGGTACTCCGCAGCTGGACATTGTaGCGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: STCSKVLRSWTL*RCSLLLSISSR
Trigger: CCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp ACCACCTGCTCCAAGGTACTCCGCAGCTGGACATTGTaGCGCTGCAGCCTGCTCCTGTCAATCTCCAGCCGG +
Preference number: 6 (lower is better)
Translates to: TTCSKVLRSWTL*RCSLLLSISSR
Trigger: CCGGCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422671.1
CDS CAA 72 bp CGCTCCACCTGCTCCAAGGTACTCCGCAGCTGGACATaGTGGCGCTGCAGCCTGCTCCTGTCAATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RSTCSKVLRSWT*WRCSLLLSISS
Trigger: GCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGAGCG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 90 bp AACTCCTGGCTCCTTTCATGGGCTTCCTTCTCCAGCTCCTGGGTCTaGGCTAGTAGCAGCAGCAGCTGGGCCGGCTCCCGCCCATCCATT +
Preference number: 6 (lower is better)
Translates to: NSWLLSWASFSSSWV*ASSSSSWAGSRPSI
Trigger: AATGGATGGGCGGGAGCCGGCCCAGCTGCTGCTGCTACTAGCCAAGACCCAGGAGCTGGAGAAGGAAGCCCATGAAAGGAGCCAGGAGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS TCA 72 bp AGAAGGCGGCTGAGAAGCGATACTTCAGCAGGGTCCTaGAGAATGGGAGCTCCAGAGTCGGGTGGCGGGTGG +
Preference number: 6 (lower is better)
Translates to: RRRLRSDTSAGS*RMGAPESGGGW
Trigger: CCACCCGCCACCCGACTCTGGAGCTCCCATTCTTCAGGACCCTGCTGAAGTATCGCTTCTCAGCCGCCTTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000461386.5
CDS CCA 72 bp CCACTATTTCCTGCTCTCGCTGGGACAGGAGGAGGCTaGTCTCACCTACCTTCCTGTGCAGGCCCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: PLFPALAGTGGG*SHLPSCAGPGA
Trigger: AGCTCCAGGGCCTGCACAGGAAGGTAGGTGAGACCAGCCTCCTCCTGTCCCAGCGAGAGCAGGAAATAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp CGTTCTCGCTCCACCTGCTCCAAGGTACTCCGCAGCTaGACATTGTGGCGCTGCAGCCTGCTCCTGTCAATC +
Preference number: 6 (lower is better)
Translates to: RSRSTCSKVLRS*TLWRCSLLLSI
Trigger: GATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGAGCGAGAACG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 72 bp AACATGGCTACCTCCTGCAGACTGCTGACACTGGCCTaGGTCTGCGCTAGGGAGAGTGCCAAGTCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: NMATSCRLLTLA*VCARESAKSWA
Trigger: GGCCCAGGACTTGGCACTCTCCCTAGCGCAGACCAAGGCCAGTGTCAGCAGTCTGCAGGAGGTAGCCATGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 72 bp AGGACCACCTGCTCCAAGGTACTCCGCAGCTGGACATaGTGGCGCTGCAGCCTGCTCCTGTCAATCTCCAGC +
Preference number: 6 (lower is better)
Translates to: RTTCSKVLRSWT*WRCSLLLSISS
Trigger: GCTGGAGATTGACAGGAGCAGGCTGCAGCGCCACAATGTCCAGCTGCGGAGTACCTTGGAGCAGGTGGTCCT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000422671.1
CDS CAA 90 bp CCTCCTTCTCCTGGACTGCCCTGGCAAGCACTTCTTCCTGTCGCTTaGCCTCCTGATGTAGCTGCTCCAGCTGAGTCGTGGCTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: PPSPGLPWQALLPVA*PPDVAAPAESWLPP
Trigger: AGGAGGCAGCCACGACTCAGCTGGAGCAGCTACATCAGGAGGCAAAGCGACAGGAAGAAGTGCTTGCCAGGGCAGTCCAGGAGAAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 90 bp GCAGGATCAGCTTCATGTGCTCTAGGCTCCCGCGCTGTGCTTTACTaGGGCCCTTCCCTTCCTCTGCCCGTTCCTGCATCAGCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: AGSASCALGSRAVLY*GPSLPLPVPASAAS
Trigger: AGAGGCAGCTGATGCAGGAACGGGCAGAGGAAGGGAAGGGCCCAAGTAAAGCACAGCGCGGGAGCCTAGAGCACATGAAGCTGATCCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS TCA 72 bp AGTGGCGTCGGAATGTCACAACCTCCCGCCATAGACTaGGAAGGCGACCGTGCTCCCCTTTCAGGTAGCCCT +
Preference number: 6 (lower is better)
Translates to: SGVGMSQPPAID*EGDRAPLSGSP
Trigger: AGGGCTACCTGAAAGGGGAGCACGGTCGCCTTCTCAGTCTATGGCGGGAGGTTGTGACATTCCGACGCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000465987.1
CDS TCA 72 bp GGCCTGCTAGCTCACGGCTGGTCTGTGCTGAGCGGGTaGTGTAGTCCTGCTTCTGCTTCCGCTCCAAAGTCA +
Preference number: 6 (lower is better)
Translates to: GLLAHGWSVLSG*CSPASASAPKS
Trigger: TGACTTTGGAGCGGAAGCAGAAGCAGGACTACATCACCCGCTCAGCACAGACCAGCCGTGAGCTAGCAGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp CTGCAGCACCTTGGCCTGCAGCTTCCTCACAAGGGTTaGTTGTCTCTGCTGGGCCTCCTGGGAGTTCTTCAG +
Preference number: 6 (lower is better)
Translates to: LQHLGLQLPHKG*LSLLGLLGVLQ
Trigger: CTGAAGAACTCCCAGGAGGCCCAGCAGAGACAAGCAACCCTTGTGAGGAAGCTGCAGGCCAAGGTGCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000420564.5
ENST00000425934.5
ENST00000446710.5
ENST00000461386.5
CDS GCA 72 bp CTCGGTGCACAGCGAGTGCAAAAACCGAGAAGCGAATaGAGCTGCGCCTGGAGAAGGCGGCTGAGAAGCGAT +
Preference number: 6 (lower is better)
Translates to: LGAQRVQKPRSE*SCAWRRRLRSD
Trigger: ATCGCTTCTCAGCCGCCTTCTCCAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000461386.5
CDS GCA 72 bp ACGAGGGGCCGGGAAAGTAACTCGGTGCACAGCGAGTaGAAAAACCGAGAAGCGAATGCAGCTGCGCCTGGA +
Preference number: 6 (lower is better)
Translates to: TRGRESNSVHSE*KNREANAAAPG
Trigger: TCCAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCCGGCCCCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000461386.5
CDS GCA 72 bp CAGGTCTTGATGAAGCTTGTGGAGGGCAGATGCTACTaGCTCAGCGGAGAGAGCAGTCAGCAGGGGCCCTCT +
Preference number: 6 (lower is better)
Translates to: QVLMKLVEGRCY*LSGESSQQGPS
Trigger: AGAGGGCCCCTGCTGACTGCTCTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAGCTTCATCAAGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS GCA 72 bp AGCTCTCTGATCTGCTCCCTCTGCACAGTCAGCTTCTaGTCTCGCTCCTGGACGGCCATGGGCAGATGCTCT +
Preference number: 6 (lower is better)
Translates to: SSLICSLCTVSF*SRSWTAMGRCS
Trigger: AGAGCATCTGCCCATGGCCGTCCAGGAGCGAGAGCAGAAGCTGACTGTGCAGAGGGAGCAGATCAGAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 72 bp AGCTCTTCATCCCTCTGGGCAAGTGCCTGCTGCAGCTaGTGCACATCCTCCTGGTATCGGAGATCCTGGTCC +
Preference number: 6 (lower is better)
Translates to: SSSSLWASACCS*CTSSWYRRSWS
Trigger: GGACCAGGATCTCCGATACCAGGAGGATGTGCAGCAGCTGCAGCAGGCACTTGCCCAGAGGGATGAAGAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp TCCCTCTCCTGCAGCTCTCTTGCCAGAACGGTGCTGTaGCTCTCCAGGTCATGGATCTGGCTGCTTTGTGCC +
Preference number: 6 (lower is better)
Translates to: SLSCSSLARTVL*LSRSWIWLLCA
Trigger: GGCACAAAGCAGCCAGATCCATGACCTGGAGAGCCACAGCACCGTTCTGGCAAGAGAGCTGCAGGAGAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 72 bp CCTGGACTGCCCTGGCAAGCACTTCTTCCTGTCGCTTaGCCTCCTGATGTAGCTGCTCCAGCTGAGTCGTGG +
Preference number: 6 (lower is better)
Translates to: PGLPWQALLPVA*PPDVAAPAESW
Trigger: CCACGACTCAGCTGGAGCAGCTACATCAGGAGGCAAAGCGACAGGAAGAAGTGCTTGCCAGGGCAGTCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 72 bp GCTTCATGTGCTCTAGGCTCCCGCGCTGTGCTTTACTaGGGCCCTTCCCTTCCTCTGCCCGTTCCTGCATCA +
Preference number: 6 (lower is better)
Translates to: ASCALGSRAVLY*GPSLPLPVPAS
Trigger: TGATGCAGGAACGGGCAGAGGAAGGGAAGGGCCCAAGTAAAGCACAGCGCGGGAGCCTAGAGCACATGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS TCA 72 bp GCTTCATGTTGTTCAACCCAGGGCTTCTTGTCTCCATaGGGGCACCAGGTGGTAGGCCCACAGGTCCCTAGG +
Preference number: 6 (lower is better)
Translates to: ASCCSTQGFLSP*GHQVVGPQVPR
Trigger: CCTAGGGACCTGTGGGCCTACCACCTGGTGCCCTCATGGAGACAAGAAGCCCTGGGTTGAACAACATGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000420564.5
ENST00000425934.5
ENST00000446710.5
ENST00000461386.5
CDS TCA 72 bp TGGTCAGCTCCCGGCCTCGCTCTCTCAAGGACAGCTTaGTCTGTTCCAGGTCCTCCTCCAGGATCTTGGTCT +
Preference number: 6 (lower is better)
Translates to: WSAPGLALSRTA*SVPGPPPGSWS
Trigger: AGACCAAGATCCTGGAGGAGGACCTGGAACAGATCAAGCTGTCCTTGAGAGAGCGAGGCCGGGAGCTGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp CTTCCACAGGTCTTGATGAAGCTTGTGGAGGGCAGATaGTACTGCCTCAGCGGAGAGAGCAGTCAGCAGGGG +
Preference number: 6 (lower is better)
Translates to: LPQVLMKLVEGR*YCLSGESSQQG
Trigger: CCCCTGCTGACTGCTCTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAGCTTCATCAAGACCTGTGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000425525.1
CDS GCA 72 bp TGTCTCAGCTCTTCATCCCTCTGGGCAAGTGCCTGCTaGAGCTGCTGCACATCCTCCTGGTATCGGAGATCC +
Preference number: 6 (lower is better)
Translates to: CLSSSSLWASAC*SCCTSSWYRRS
Trigger: GGATCTCCGATACCAGGAGGATGTGCAGCAGCTGCAGCAGGCACTTGCCCAGAGGGATGAAGAGCTGAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp CGAGTGCAAAAACCGAGAAGCGAATGCAGCTGCGCCTaGAGAAGGCGGCTGAGAAGCGATACTTCAGCAGGG +
Preference number: 6 (lower is better)
Translates to: RVQKPRSECSCA*RRRLRSDTSAG
Trigger: CCCTGCTGAAGTATCGCTTCTCAGCCGCCTTCTCCAGGCGCAGCTGCATTCGCTTCTCGGTTTTTGCACTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000461386.5
CDS CCA 72 bp CTCTCTGCCTGGGTCCGTTCTTCTTCCCTCTGGGCCTaGATGGCCTCCATTTCTGTCTGCTGCTCCTTTAGC +
Preference number: 6 (lower is better)
Translates to: LSAWVRSSSLWA*MASISVCCSFS
Trigger: GCTAAAGGAGCAGCAGACAGAAATGGAGGCCATCCAGGCCCAGAGGGAAGAAGAACGGACCCAGGCAGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp AGCTCCTGGCTCCTTTCTTCTAGGTCCAGCGTAAGGTaGGTCAAAGCCACTCTCTGGGTTTCCCTCTGGCCC +
Preference number: 6 (lower is better)
Translates to: SSWLLSSRSSVR*VKATLWVSLWP
Trigger: GGGCCAGAGGGAAACCCAGAGAGTGGCTTTGACCCACCTTACGCTGGACCTAGAAGAAAGGAGCCAGGAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp AGTTGCTGCTGCAGGACCACTATTTCCTGCTCTCGCTaGGACAGGAGGAGGCTGGTCTCACCTACCTTCCTG +
Preference number: 6 (lower is better)
Translates to: SCCCRTTISCSR*DRRRLVSPTFL
Trigger: CAGGAAGGTAGGTGAGACCAGCCTCCTCCTGTCCCAGCGAGAGCAGGAAATAGTGGTCCTGCAGCAGCAACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp TGGGCAAGTGCCTGCTGCAGCTGCTGCACATCCTCCTaGTATCGGAGATCCTGGTCCTGGATCTCACCTTCT +
Preference number: 6 (lower is better)
Translates to: WASACCSCCTSS*YRRSWSWISPS
Trigger: AGAAGGTGAGATCCAGGACCAGGATCTCCGATACCAGGAGGATGTGCAGCAGCTGCAGCAGGCACTTGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS TCA 72 bp TCCACCAGCCTCTGGGAGTCATCCTGGGCCACCAGCTaGGACTTCAAGTCCTCCACCTGGAAAATTAAGGGC +
Preference number: 6 (lower is better)
Translates to: STSLWESSWATS*DFKSSTWKIKG
Trigger: GCCCTTAATTTTCCAGGTGGAGGACTTGAAGTCTCAGCTGGTGGCCCAGGATGACTCCCAGAGGCTGGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487467.1
CDS GCA 72 bp GAACGGTGTCAACGAGGGGCCGGGAAAGTAACTCGGTaGACAGCGAGTGCAAAAACCGAGAAGCGAATGCAG +
Preference number: 6 (lower is better)
Translates to: ERCQRGAGKVTR*TASAKTEKRMQ
Trigger: CTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCCGGCCCCTCGTTGACACCGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 72 bp CTGCTCCTGTCAATCTCCAGCCGGGCCACTGCTTGCTaGAGGTGTTCAAGCCTTTGTCTCCATGACTGCTTC +
Preference number: 6 (lower is better)
Translates to: LLLSISSRATAC*RCSSLCLHDCF
Trigger: GAAGCAGTCATGGAGACAAAGGCTTGAACACCTGCAGCAAGCAGTGGCCCGGCTGGAGATTGACAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp CTACGGTGTCAACGAGGGGCCGGGAAAGTAACTCGGTaGACAGCGAGTGCAAAAACCGAGAAGCGAATGCAG +
Preference number: 6 (lower is better)
Translates to: LRCQRGAGKVTR*TASAKTEKRMQ
Trigger: CTGCATTCGCTTCTCGGTTTTTGCACTCGCTGTGCACCGAGTTACTTTCCCGGCCCCTCGTTGACACCGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS CCA 72 bp GCCAGCACCTGCTCTTCCAGTACCAGCTGCAGTGACTaGGGCTTCATGTTGTTCAACCCAGGGCTTCTTGTC +
Preference number: 6 (lower is better)
Translates to: ASTCSSSTSCSD*GFMLFNPGLLV
Trigger: GACAAGAAGCCCTGGGTTGAACAACATGAAGCCCCAGTCACTGCAGCTGGTACTGGAAGAGCAGGTGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000420564.5
ENST00000425934.5
ENST00000446710.5
ENST00000461386.5
CDS CCA 72 bp GCTTTGCCTCCTGATGTAGCTGCTCCAGCTGAGTCGTaGCTGCCTCCTGCTGGTGACGTGACTCACTTAGTT +
Preference number: 6 (lower is better)
Translates to: ALPPDVAAPAES*LPPAGDVTHLV
Trigger: AACTAAGTGAGTCACGTCACCAGCAGGAGGCAGCCACGACTCAGCTGGAGCAGCTACATCAGGAGGCAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp AGAGCCGCTTTCTCTCGTACTAGGGCCTCCTTCTCCTaGACTGCCCTGGCAAGCACTTCTTCCTGTCGCTTT +
Preference number: 6 (lower is better)
Translates to: RAAFSRTRASFS*TALASTSSCRF
Trigger: AAAGCGACAGGAAGAAGTGCTTGCCAGGGCAGTCCAGGAGAAGGAGGCCCTAGTACGAGAGAAAGCGGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 72 bp AAGCTCTCCATGACGCTCCTTCAGTGTCATATGGGCTaGCTCCAGAGCTCCCTGGAGGGCGTCTGCCTTTTC +
Preference number: 6 (lower is better)
Translates to: KLSMTLLQCHMG*LQSSLEGVCLF
Trigger: GAAAAGGCAGACGCCCTCCAGGGAGCTCTGGAGCAAGCCCATATGACACTGAAGGAGCGTCATGGAGAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 72 bp CTGGTATCGGAGATCCTGGTCCTGGATCTCACCTTCTaGTATCCTCAGAGCCTCCTCCAGCTGCCGACTGTG +
Preference number: 6 (lower is better)
Translates to: LVSEILVLDLTF*YPQSLLQLPTV
Trigger: CACAGTCGGCAGCTGGAGGAGGCTCTGAGGATACAAGAAGGTGAGATCCAGGACCAGGATCTCCGATACCAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 90 bp CTGATCCCTCAGAACATCCCGGGTCTGTTGAGTCTTCCACAGGTCTaGATGAAGCTTGTGGAGGGCAGATGCTACTGCCTCAGCGGAGAG +
Preference number: 6 (lower is better)
Translates to: LIPQNIPGLLSLPQV*MKLVEGRCYCLSGE
Trigger: CTCTCCGCTGAGGCAGTAGCATCTGCCCTCCACAAGCTTCATCAAGACCTGTGGAAGACTCAACAGACCCGGGATGTTCTGAGGGATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 72 bp AGTTGTTGGCTGGCATCTGCTAGCTCCTTCTGCGTCTaGAGCAGTGTCTCCAGGAGGGATACTCTCTCCTTC +
Preference number: 6 (lower is better)
Translates to: SCWLASASSFCV*SSVSRRDTLSF
Trigger: GAAGGAGAGAGTATCCCTCCTGGAGACACTGCTGCAGACGCAGAAGGAGCTAGCAGATGCCAGCCAACAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp CTTTCATGTCCTGCCTCAGTCGTTCCAGTTGTTGGCTaGCATCTGCTAGCTCCTTCTGCGTCTGCAGCAGTG +
Preference number: 6 (lower is better)
Translates to: LSCPASVVPVVG*HLLAPSASAAV
Trigger: CACTGCTGCAGACGCAGAAGGAGCTAGCAGATGCCAGCCAACAACTGGAACGACTGAGGCAGGACATGAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp TGGACTTTCATGTCCTGCCTCAGTCGTTCCAGTTGTTaGCTGGCATCTGCTAGCTCCTTCTGCGTCTGCAGC +
Preference number: 6 (lower is better)
Translates to: WTFMSCLSRSSC*LASASSFCVCS
Trigger: GCTGCAGACGCAGAAGGAGCTAGCAGATGCCAGCCAACAACTGGAACGACTGAGGCAGGACATGAAAGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp GTAAGGTGGGTCAAAGCCACTCTCTGGGTTTCCCTCTaGCCCTCCAGCTCCTTGATCAGTTTTTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: VRWVKATLWVSL*PSSSLISFCWH
Trigger: GTGCCAGCAAAAACTGATCAAGGAGCTGGAGGGCCAGAGGGAAACCCAGAGAGTGGCTTTGACCCACCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp TGCTGCACATCCTCCTGGTATCGGAGATCCTGGTCCTaGATCTCACCTTCTTGTATCCTCAGAGCCTCCTCC +
Preference number: 6 (lower is better)
Translates to: CCTSSWYRRSWS*ISPSCILRASS
Trigger: GGAGGAGGCTCTGAGGATACAAGAAGGTGAGATCCAGGACCAGGATCTCCGATACCAGGAGGATGTGCAGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp ATCCATTCTTCCAGATCCGTTGGGTTCCCGAGACTGTaGTCCCACAGTCAAGCGCAGACAACAGGTCAACAG +
Preference number: 6 (lower is better)
Translates to: IHSSRSVGFPRL*SHSQAQTTGQQ
Trigger: CTGTTGACCTGTTGTCTGCGCTTGACTGTGGGAGCACAGTCTCGGGAACCCAACGGATCTGGAAGAATGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS GCA 72 bp GCTTGCTGCAGGTGTTCAAGCCTTTGTCTCCATGACTaGTTCTCCATTCCATCAGGACTAGGCTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: ACCRCSSLCLHD*FSIPSGLGSAS
Trigger: GGAGGCTGAGCCTAGTCCTGATGGAATGGAGAAGCAGTCATGGAGACAAAGGCTTGAACACCTGCAGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 72 bp CAGAACATCCCGGGTCTGTTGAGTCTTCCACAGGTCTaGATGAAGCTTGTGGAGGGCAGATGCTACTGCCTC +
Preference number: 6 (lower is better)
Translates to: QNIPGLLSLPQV*MKLVEGRCYCL
Trigger: GAGGCAGTAGCATCTGCCCTCCACAAGCTTCATCAAGACCTGTGGAAGACTCAACAGACCCGGGATGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 90 bp TTCTCTCTCTTGCCCCAGATTCTGCTTCTCTTGGATCATATTCTCTaGGACCCTCTGGGCCAGAGACTTCTCCAGCAGCTGCTCCCGTTC +
Preference number: 6 (lower is better)
Translates to: FSLLPQILLLLDHIL*DPLGQRLLQQLLPF
Trigger: GAACGGGAGCAGCTGCTGGAGAAGTCTCTGGCCCAGAGGGTCCAAGAGAATATGATCCAAGAGAAGCAGAATCTGGGGCAAGAGAGAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS TCA 72 bp ACCTCACTTCCCCTTGGATTACTTCCTTGGCTTGAGTaGCAGTTTGAATCTGGACCTCCAGCTGCCCCTTGG +
Preference number: 6 (lower is better)
Translates to: TSLPLGLLPWLE*QFESGPPAAPW
Trigger: CCAAGGGGCAGCTGGAGGTCCAGATTCAAACTGTCACTCAAGCCAAGGAAGTAATCCAAGGGGAAGTGAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp AGCTGTCTCTGCAGATCCTGCAACTCTGTGTGGACCTaGCTCTTCTCAGCCTCAGTATCAGTTAGACGCTCT +
Preference number: 6 (lower is better)
Translates to: SCLCRSCNSVWT*LFSASVSVRRS
Trigger: AGAGCGTCTAACTGATACTGAGGCTGAGAAGAGCCAGGTCCACACAGAGTTGCAGGATCTGCAGAGACAGCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp AGAGATTGTTCCTCCATTGGGGAGGTTTTGTGGCTGTaGGGTAAGGCTTCCAGGTTGTTCCTTTGCTGGGTC +
Preference number: 6 (lower is better)
Translates to: RDCSSIGEVLWL*GKASRLFLCWV
Trigger: GACCCAGCAAAGGAACAACCTGGAAGCCTTACCCCACAGCCACAAAACCTCCCCAATGGAGGAACAATCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 72 bp TTCCCCTTGGATTACTTCCTTGGCTTGAGTGACAGTTaGAATCTGGACCTCCAGCTGCCCCTTGGTGACCTC +
Preference number: 6 (lower is better)
Translates to: FPLDYFLGLSDS*NLDLQLPLGDL
Trigger: GAGGTCACCAAGGGGCAGCTGGAGGTCCAGATTCAAACTGTCACTCAAGCCAAGGAAGTAATCCAAGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CAA 72 bp TTGCCCCAGATTCTGCTTCTCTTGGATCATATTCTCTaGGACCCTCTGGGCCAGAGACTTCTCCAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: LPQILLLLDHIL*DPLGQRLLQQL
Trigger: CAGCTGCTGGAGAAGTCTCTGGCCCAGAGGGTCCAAGAGAATATGATCCAAGAGAAGCAGAATCTGGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CAA 90 bp GCACCTCACTTCCCCTTGGATTACTTCCTTGGCTTGAGTGACAGTTaGAATCTGGACCTCCAGCTGCCCCTTGGTGACCTCTATCACAGA +
Preference number: 6 (lower is better)
Translates to: APHFPLDYFLGLSDS*NLDLQLPLGDLYHR
Trigger: TCTGTGATAGAGGTCACCAAGGGGCAGCTGGAGGTCCAGATTCAAACTGTCACTCAAGCCAAGGAAGTAATCCAAGGGGAAGTGAGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS CCA 72 bp AGATCTCTGTCAGTAGCTGACTTCATTTCCAGGAAGTaGCGTCGGAATGTCACAACCTCCCGCCATAGACTG +
Preference number: 6 (lower is better)
Translates to: RSLSVADFISRK*RRNVTTSRHRL
Trigger: CAGTCTATGGCGGGAGGTTGTGACATTCCGACGCCACTTCCTGGAAATGAAGTCAGCTACTGACAGAGATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397524.5
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
CDS TCA 72 bp TCTTTGAGCTCCTGGAGTTCATGGATATGCTCCTGCTaGCATTCCACCTCCTTCTCCTTATCACGCAGGATC +
Preference number: 6 (lower is better)
Translates to: SLSSWSSWICSC*HSTSFSLSRRI
Trigger: GATCCTGCGTGATAAGGAGAAGGAGGTGGAATGTCAGCAGGAGCATATCCATGAACTCCAGGAGCTCAAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS GCA 72 bp ATCTTCCAGGAAACTATTCTCTTATCCCAGGATTTCTaGCAACAACTCTACGGTGTCAACGAGGGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: IFQETILLSQDF*QQLYGVNEGPG
Trigger: TCCCGGCCCCTCGTTGACACCGTAGAGTTGTTGGCAGAAATCCTGGGATAAGAGAATAGTTTCCTGGAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461386.5
CDS CCA 72 bp AGGGCTTCAGGGTCCTTCGAGGTTTACCATAGTCAGTaGCCATTTCCAATGCTCTGGCGATTCTACCAATTC +
Preference number: 6 (lower is better)
Translates to: RASGSFEVYHSQ*PFPMLWRFYQF
Trigger: GAATTGGTAGAATCGCCAGAGCATTGGAAATGGCCACTGACTATGGTAAACCTCGAAGGACCCTGAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487467.1
CDS CAA 72 bp CATATGCCAGGTTCTATGCTGGCGTTTTCCAAAACATaGCTCTCATCTTCCCAGCAACCAGACGCTCCCTCT +
Preference number: 6 (lower is better)
Translates to: HMPGSMLAFSKT*LSSSQQPDAPS
Trigger: AGAGGGAGCGTCTGGTTGCTGGGAAGATGAGAGCAATGTTTTGGAAAACGCCAGCATAGAACCTGGCATATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425096.1
CDS CCA 72 bp CCATCAGCATCTCCTGACATATGCCAGGTTCTATGCTaGCGTTTTCCAAAACATTGCTCTCATCTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: PSASPDICQVLC*RFPKHCSHLPS
Trigger: GCTGGGAAGATGAGAGCAATGTTTTGGAAAACGCCAGCATAGAACCTGGCATATGTCAGGAGATGCTGATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425096.1
CDS CAA 72 bp AGAGTCCAATTCCAAAGAGTTCTCATGACCAGAGCCTaGGGCTATATTGTCCCCTTCTTCCACCATGACCTG +
Preference number: 6 (lower is better)
Translates to: RVQFQRVLMTRA*GYIVPFFHHDL
Trigger: CAGGTCATGGTGGAAGAAGGGGACAATATAGCCCAAGGCTCTGGTCATGAGAACTCTTTGGAATTGGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS CAA 90 bp TGGGCTATATTGTCCCCTTCTTCCACCATGACCTGGGTTATATCCTaGATCACCTGCTGTAAAGACAACTTCTCCTCTTGCGCATTCCTA +
Preference number: 6 (lower is better)
Translates to: WAILSPSSTMTWVIS*ITCCKDNFSSCAFL
Trigger: TAGGAATGCGCAAGAGGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATATAACCCAGGTCATGGTGGAAGAAGGGGACAATATAGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS TCA 72 bp AGGCATTCCAGAGTAACCAACTGCTTTTTCAGGTCCTaGACCTGTCCTCTCTGGGACTCAATCATTTGGTCT +
Preference number: 6 (lower is better)
Translates to: RHSRVTNCFFRS*TCPLWDSIIWS
Trigger: AGACCAAATGATTGAGTCCCAGAGAGGACAGGTTCAGGACCTGAAAAAGCAGTTGGTTACTCTGGAATGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000397527.6
ENST00000422671.1
CDS CCA 72 bp CCTTGGGCTATATTGTCCCCTTCTTCCACCATGACCTaGGTTATATCCTTGATCACCTGCTGTAAAGACAAC +
Preference number: 6 (lower is better)
Translates to: PWAILSPSSTMT*VISLITCCKDN
Trigger: GTTGTCTTTACAGCAGGTGATCAAGGATATAACCCAGGTCATGGTGGAAGAAGGGGACAATATAGCCCAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS CAA 72 bp TTGTCCCCTTCTTCCACCATGACCTGGGTTATATCCTaGATCACCTGCTGTAAAGACAACTTCTCCTCTTGC +
Preference number: 6 (lower is better)
Translates to: LSPSSTMTWVIS*ITCCKDNFSSC
Trigger: GCAAGAGGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATATAACCCAGGTCATGGTGGAAGAAGGGGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS TCA 72 bp GAGAAGATACTAGAGTCCAATTCCAAAGAGTTCTCATaGCCAGAGCCTTGGGCTATATTGTCCCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: EKILESNSKEFS*PEPWAILSPSS
Trigger: GGAAGAAGGGGACAATATAGCCCAAGGCTCTGGTCATGAGAACTCTTTGGAATTGGACTCTAGTATCTTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS GCA 72 bp TCTTCCACCATGACCTGGGTTATATCCTTGATCACCTaGTGTAAAGACAACTTCTCCTCTTGCGCATTCCTA +
Preference number: 6 (lower is better)
Translates to: SSTMTWVISLIT*CKDNFSSCAFL
Trigger: TAGGAATGCGCAAGAGGAGAAGTTGTCTTTACAGCAGGTGATCAAGGATATAACCCAGGTCATGGTGGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1
CDS TCA 72 bp AGATGCTCTAAAACAGACCTACACTTCTCTAGCTCCTaGATCTGTTCTTGCTGCAGATCTACCTCTTGGTTC +
Preference number: 6 (lower is better)
Translates to: RCSKTDLHFSSS*ICSCCRSTSWF
Trigger: GAACCAAGAGGTAGATCTGCAGCAAGAACAGATTCAGGAGCTAGAGAAGTGTAGGTCTGTTTTAGAGCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397527.6
CDS GCA 72 bp TCCTTGATCACCTGCTGTAAAGACAACTTCTCCTCTTaGGCATTCCTACTAAGAGATGCTTCATGTTCCATT +
Preference number: 6 (lower is better)
Translates to: SLITCCKDNFSS*AFLLRDASCSI
Trigger: AATGGAACATGAAGCATCTCTTAGTAGGAATGCGCAAGAGGAGAAGTTGTCTTTACAGCAGGTGATCAAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000397527.6
ENST00000425934.5
ENST00000461386.5
ENST00000474829.1