RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP20 (Homo sapiens)

Ensembl gene IDs: ENSG00000133393

Ensembl transcript IDs: ENST00000255759.11, ENST00000572415.5, ENST00000573087.5, ENST00000573396.5, ENST00000573429.5, ENST00000573968.5, ENST00000575073.5, ENST00000575938.1, ENST00000622266.2, ENST00000631896.1, ENST00000631974.1, ENST00000632623.1, ENST00000633954.1, ENST00000633985.1, ENST00000634146.1, ENST00000634203.1

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGTAAGAGTTTCGGAGCCCAAACAAGTAGGGGGCTGGCCCTCTTCTaGCTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAA +
Preference number: 1 (lower is better)
Translates to: GKSFGAQTSRGLALF*LICDCTTEGHTEIK
Trigger: TTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTGGGCTCCGAAACTCTTACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR TCA 90 bp GGCTTTCTTCTACTAGGTTGTCTGCCAAGACTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTA +
Preference number: 1 (lower is better)
Translates to: GFLLLGCLPRLGSEG*SEGPFRNAFWMPSL
Trigger: TAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
3UTR TCA 90 bp GATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTaGAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCAT +
Preference number: 1 (lower is better)
Translates to: DCTTEGHTEIKQCHL*KIPFWYFSQSLSLH
Trigger: ATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATAAACAAGTAGGGGGCTaGCCCTCTTCTGGCTCATCT +
Preference number: 2 (lower is better)
Translates to: TKCPLPTSLDENQVPRENKQVGG*PSSGSS
Trigger: AGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR TCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTGGCACACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLGTQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTGTGCC...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR TCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATCTTCTGGCTCATCTGTaGTTGCACAACCGAGGGCCA +
Preference number: 2 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYLLAHL*LHNRGP
Trigger: TGGCCCTCGGTTGTGCAATCACAGATGAGCCAGAAG...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATACTACTCCGGTGTGGTaGCACAGGCCTGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYTTPVW*HRPVFP
Trigger: TGGGAAAACAGGCCTGTGCCACCACACCGGAGTAGT...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGACTACTCCGGTGTGGTaGCACAGGCCTGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: AIFEKSLSGISPKACLFMTTPVW*HRPVFP
Trigger: TGGGAAAACAGGCCTGTGCCACCACACCGGAGTAGT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGGGCACACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKGTQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTGTGCC...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR GCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGAAGCCTGTCTCTTCATaGTTACTTCACATTCTTTAT +
Preference number: 2 (lower is better)
Translates to: QTSRGLALFWLICDCTTEKPVSS*LLHILY
Trigger: ATAAAGAATGTGAAGTAAGCATGAAGAGACAGGCTT...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGACTACTCCGGTGTGGTaGCACAGGCCTGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKTTPVW*HRPVFP
Trigger: TGGGAAAACAGGCCTGTGCCACCACACCGGAGTAGT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACTACTCCGGTGTGGTaGCACAGGCCTGTTTTCCCA +
Preference number: 2 (lower is better)
Translates to: KEDANFANYSSYHSSPWKTTPVW*HRPVFP
Trigger: TGGGAAAACAGGCCTGTGCCACCACACCGGAGTAGT...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR TCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTGGCACACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: IYHRTFANQELSIIIVSCGTQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTGTGCC...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR TCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTTGTTTTCAATGAAATaGGCCTGTGGACACTACATT +
Preference number: 2 (lower is better)
Translates to: TKCPLPTSLDENQVPRENLFSMK*ACGHYI
Trigger: AATGTAGTGTCCACAGGCTCATTTCATTGAAAACAA...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR GCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTTGGCTCATCTGTGATTaGACAACCGAGGGCCACACG +
Preference number: 2 (lower is better)
Translates to: IYHRTFANQELSIIIVSCWLICD*TTEGHT
Trigger: CGTGTGGCCCTCGGTTGTGCAATCACAGATGAGCCA...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGAAACAAGTAGGGGGCTaGCCCTCTTCTGGCTCATCT +
Preference number: 2 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKKQVGG*PSSGSS
Trigger: AGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR GCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATAAGCCTGTCTCTTCATaGTTACTTCACATTCTTTAT +
Preference number: 2 (lower is better)
Translates to: TKCPLPTSLDENQVPRENKPVSS*LLHILY
Trigger: ATAAAGAATGTGAAGTAAGCATGAAGAGACAGGCTT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR TCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATGTCAGTTGTTTTCAATaGAATGAGCCTGTGGACACT +
Preference number: 2 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYVSCFQ*NEPVDT
Trigger: AGTGTCCACAGGCTCATTTCATTGAAAACAACTGAC...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGATAATACTTCCTAAATaGCTGGGCTCAGTGGCTCAC +
Preference number: 2 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKIILPK*LGSVAH
Trigger: GTGAGCCACTGAGCCCAGCCATTTAGGAAGTATTAT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR CAA 90 bp TTTGCAAAGCAGCACAGAATTGACACCCTAAAGAGGATGCCAATTTaGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTA +
Preference number: 2 (lower is better)
Translates to: FAKQHRIDTLKRMPI*LTTALTTLLHGKPL
Trigger: TAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTTAGGGTGTCAATTCTGTGCTGCTTTGCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR GCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGATACCATCGAACTTTTaGCAATCAGGAGCTGTCTAT +
Preference number: 2 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKIPSNF*QSGAVY
Trigger: ATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTAT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR GCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTAAGCCTGTCTCTTCATaGTTACTTCACATTCTTTAT +
Preference number: 2 (lower is better)
Translates to: IYHRTFANQELSIIIVSCKPVSS*LLHILY
Trigger: ATAAAGAATGTGAAGTAAGCATGAAGAGACAGGCTT...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR CCA 72 bp TTCGGAGCCCAAACAAGTAGGGGGCTGGCCCTCTTCTaGCTCATCTGTGATTGCACAACCGAGGGCCACACG +
Preference number: 3 (lower is better)
Translates to: FGAQTSRGLALF*LICDCTTEGHT
Trigger: CGTGTGGCCCTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTGGGCTCCGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR GCA 72 bp AGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTaGACAACCGAGGGCCACACGGAGATTAAACAATGC +
Preference number: 3 (lower is better)
Translates to: SRGLALFWLICD*TTEGHTEIKQC
Trigger: GCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR CCA 72 bp TTGGTAAGAGTTTCGGAGCCCAAACAAGTAGGGGGCTaGCCCTCTTCTGGCTCATCTGTGATTGCACAACCG +
Preference number: 3 (lower is better)
Translates to: LVRVSEPKQVGG*PSSGSSVIAQP
Trigger: CGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTGGGCTCCGAAACTCTTACCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR TCA 72 bp CTACTAGGTTGTCTGCCAAGACTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGAAATGCATTCTGGATG +
Preference number: 3 (lower is better)
Translates to: LLGCLPRLGSEG*SEGPFRNAFWM
Trigger: CATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAACCTAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
3UTR-3UTR CAA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATAAGAGGATGCCAATTTaGCTAACTACAGCTCTTACC +
Preference number: 3 (lower is better)
Translates to: TKCPLPTSLDENQVPRENKRMPI*LTTALT
Trigger: GGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CAA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATATGGAAAATGGACTCTaGCAATACTTCTGCATCCAT +
Preference number: 3 (lower is better)
Translates to: TKCPLPTSLDENQVPRENMENGL*QYFCIH
Trigger: ATGGATGCAGAAGTATTGCAAGAGTCCATTTTCCAT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CAA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATGGGCCTCCCAAAATGTaGTGTAAGTATAGTTTAAAT +
Preference number: 3 (lower is better)
Translates to: TKCPLPTSLDENQVPRENGPPKM*CKYSLN
Trigger: ATTTAAACTATACTTACACAACATTTTGGGAGGCCC...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR TCA 72 bp ACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTaGAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTG +
Preference number: 3 (lower is better)
Translates to: TEGHTEIKQCHL*KIPFWYFSQSL
Trigger: CAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATAAGAGGATGCCAATTTaGCTAACTACAGCTCTTACC +
Preference number: 3 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYKRMPI*LTTALT
Trigger: GGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTT...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CAA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTGTTGTCTGCCAAGACTaGGGTCTGAAGGCTGAAGTG +
Preference number: 3 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSVVCQD*GLKAEV
Trigger: CACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAAC...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
3UTR-3UTR CAA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGTATACCATCGAACTTTaGCCAATCAGGAGCTGTCTA +
Preference number: 3 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKYTIEL*PIRSCL
Trigger: TAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATA...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR-3UTR CAA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAATATACCATCGAACTTTaGCCAATCAGGAGCTGTCTA +
Preference number: 3 (lower is better)
Translates to: KEDANFANYSSYHSSPWKYTIEL*PIRSCL
Trigger: TAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATA...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR TCA 72 bp CAGGAGCTGTCTATCATCATAGTCAGTTGTTTTCAATaGAATGAGCCTGTGGACACTACATTAAAAATACTT +
Preference number: 3 (lower is better)
Translates to: QELSIIIVSCFQ*NEPVDTTLKIL
Trigger: AAGTATTTTTAATGTAGTGTCCACAGGCTCATTTCATTGAAAACAACTGACTATGATGATAGACAGCTCCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR GCA 72 bp AGGCAAAATTTAATTCTGAATATACCATCGAACTTTTaGCAATCAGGAGCTGTCTATCATCATAGTCAGTTG +
Preference number: 3 (lower is better)
Translates to: RQNLILNIPSNF*QSGAVYHHSQL
Trigger: CAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATATTCAGAATTAAATTTTGCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
3UTR TCA 72 bp CAGAATAATGCATATAAAAGCGCTATGGACTACACGTaGCAATTCTGCTTAACTTCCATCTTGATGATTTTA +
Preference number: 3 (lower is better)
Translates to: QNNAYKSAMDYT*QFCLTSILMIL
Trigger: TAAAATCATCAAGATGGAAGTTAAGCAGAATTGTCACGTGTAGTCCATAGCGCTTTTATATGCATTATTCTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGCTTCTGGCTCATCTGTaGTTGCACAACCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTELLAHL*LHNRGP
Trigger: TGGCCCTCGGTTGTGCAATCACAGATGAGCCAGAAG...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGAAACAAGTAGGGGGCTaGCCCTCTTCTGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEKQVGG*PSSGSS
Trigger: AGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTT...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATGGCACACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENGTQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTGTGCC...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATCTTCTGGCTCATCTGTaGTTGCACAACCGAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENLLAHL*LHNRGP
Trigger: TGGCCCTCGGTTGTGCAATCACAGATGAGCCAGAAG...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATACTACTCCGGTGTGGTaGCACAGGCCTGTTTTCCCA +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENTTPVW*HRPVFP
Trigger: TGGGAAAACAGGCCTGTGCCACCACACCGGAGTAGT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGGGTGGTCATCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEGGHLL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGATGACCACC...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573968.5
ENST00000631974.1
CDS-3UTR TCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGGACCAGATTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEDQILL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGAATCTGGTC...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTCTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPLGSEG*SEGPFR
Trigger: TCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAG...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR GCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTGGCTCATCTGTGATTaGACAACCGAGGGCCACACG +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLWLICD*TTEGHT
Trigger: CGTGTGGCCCTCGGTTGTGCAATCACAGATGAGCCA...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGATAATACTTCCTAAATaGCTGGGCTCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEIILPK*LGSVAH
Trigger: GTGAGCCACTGAGCCCAGCCATTTAGGAAGTATTAT...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATCATCATCTAGGGCATTaGAAACTTCAGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENHHLGH*KLQLGS
Trigger: GGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATG...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTCTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLLGSEG*SEGPFR
Trigger: TCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAG...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGCTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWLGSEG*SEGPFR
Trigger: TCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAG...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR TCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGGTCAGTTGTTTTCAATaGAATGAGCCTGTGGACACT +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEVSCFQ*NEPVDT
Trigger: AGTGTCCACAGGCTCATTTCATTGAAAACAACTGAC...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTCATCATCTAGGGCATTaGAAACTTCAGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPHHLGH*KLQLGS
Trigger: GGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATG...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR TCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATGACCAGATTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENDQILL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGAATCTGGTC...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp TCTTCAATGTTAGTACTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCGGCAGGAGAACTGCTTaGACCCAGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: SSMLVLFCSSFLRWSSIGGRRTA*TQEAED
Trigger: ATCCTCCGCCTCCTGGGTTCAAGCAGTTCTCCTGCC...GCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAGTACTAACATTGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR GCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATAGGTTGACCAGATTCTaGTATGAGGACAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENRLTRF*YEDRCC
Trigger: ACAGCATCTGTCCTCATAGCAGAATCTGGTCAACCT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCTAAAATCCCACTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: NAFWMPSLVPRKKWAKIPLGSEG*SEGPFR
Trigger: TCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAG...TGGGATTTTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATCTTGGGTCTGAAGGCTaGAGTGAAGGCCCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYLGSEG*SEGPFR
Trigger: TCTGAAAGGGCCTTCACTTCAGCCTTCAGACCCAAG...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp CCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCAGACTCCGTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: PFQKCILDAILSSTQEMGRLRLL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGACGGAGTCT...GCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGAGATCACAATAGAGTaGGACTCCGTCTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWEITIE*DSVCYE
Trigger: CTCATAGCAGACGGAGTCTCACTCTATTGTGATCTC...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR GCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTAACAGCCTTCAACTCTaGCACAGTCGCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPNSLQL*HSRHFS
Trigger: TGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTT...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR GCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGTGGCTCATCTGTGATTaGACAACCGAGGGCCACACG +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMWLICD*TTEGHT
Trigger: CGTGTGGCCCTCGGTTGTGCAATCACAGATGAGCCA...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGTGGAAAATGGACTCTTaGAATACTTCTGCATCCATA +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEWKMDS*NTSASI
Trigger: TATGGATGCAGAAGTATTGCAAGAGTCCATTTTCCA...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp TTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCTAAACCAGGAGGCGGAGGATaGAGTGAGCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: FRNAFWMPSLVPRKKWAKPGGGG*SELRSQ
Trigger: TTGTGATCTCAGCTCACTGCATCCTCCGCCTCCTGG...TTTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTCATTTAGTTCATGGATaGGAAACTGTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPHLVHG*ETVCPT
Trigger: CGTTGGACAGACAGTTTCTCATCCATGAACTAAATG...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAGGCACACAGATCACCTaGGGTCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKGTQIT*GQEFKT
Trigger: GGTCTTGAACTCCTGACCTCAGGTGATCTGTGTGCC...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACGGCAGGAGAACTGCTTaGACCCAGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNGRRTA*TQEAED
Trigger: ATCCTCCGCCTCCTGGGTTCAAGCAGTTCTCCTGCC...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000633954.1
ENST00000634146.1
CDS-3UTR GCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTCCTCCTTTCTTAGGTaGTCATCCATTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPSSFLR*SSIGFL
Trigger: AAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGA...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTATAATACTTCCTAAATaGCTGGGCTCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLIILPK*LGSVAH
Trigger: GTGAGCCACTGAGCCCAGCCATTTAGGAAGTATTAT...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGAAACAAGTAGGGGGCTaGCCCTCTTCTGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMKQVGG*PSSGSS
Trigger: AGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGTACCACTCTTCTCCATaGAAAACCTTTAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: QTSRGLALFWLICDCTTEYHSSP*KTFKLN
Trigger: ATTTAGCTTAAAGGTTTTCCATGGAGAAGAGTGGTA...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGCACTGCCAACATCCTTaGACGAAAACCAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMHCQHP*TKTKSP
Trigger: GGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTG...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR TCA 90 bp CCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCCATTTAGTTCATGGATaGGAAACTGTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: PFQKCILDAILSSTQEMGHLVHG*ETVCPT
Trigger: CGTTGGACAGACAGTTTCTCATCCATGAACTAAATG...GCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATAAAGCAGCACAGAATTaGCACCCTAAAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYKAAQN*HPKEDA
Trigger: GGCATCCTCTTTAGGGTGTCAATTCTGTGCTGCTTT...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTGGGCAGGAGAACTGCTTaGACCCAGGAGGCGGAGGAT +
Preference number: 4 (lower is better)
Translates to: HARNGLKSHIKEVLYYPLGRRTA*TQEAED
Trigger: ATCCTCCGCCTCCTGGGTTCAAGCAGTTCTCCTGCC...CAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR GCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTTCAGAAATGCATTCTaGATGCCATCCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPFRNAF*MPSLVP
Trigger: TGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAAAACAAGTAGGGGGCTaGCCCTCTTCTGGCTCATCT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKKQVGG*PSSGSS
Trigger: AGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTT...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAACACTGCCAACATCCTTaGACGAAAACCAAGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKHCQHP*TKTKSP
Trigger: GGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTG...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATCATATAAAAGCGCTATaGACTACACGTGACAATTCT +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENHIKAL*TTRDNS
Trigger: AGAATTGTCACGTGTAGTCCATAGCGCTTTTATATG...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTTTCTTCTACTAGGTCATCATCTAGGGCATTaGAAACTTCAGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: LFCSSFLRWSSIGFLLLGHHLGH*KLQLGS
Trigger: GGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATG...ACCTAGTAGAAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGCATCATCTAGGGCATTaGAAACTTCAGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMHHLGH*KLQLGS
Trigger: GGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATG...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGAACGGAACTACAGGTTaGCCAGATTCTGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMNGTTG*PDSAMR
Trigger: CCTCATAGCAGAATCTGGTCAACCTGTAGTTCCGTT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: PFQKCILDAILSSTQEMGQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...GCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGAAAGCAGCACAGAATTaGCACCCTAAAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMKAAQN*HPKEDA
Trigger: GGCATCCTCTTTAGGGTGTCAATTCTGTGCTGCTTT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTTTCTTCTACTAGGTGAGATCACAATAGAGTaGGACTCCGTCTGCTATGAG +
Preference number: 4 (lower is better)
Translates to: LFCSSFLRWSSIGFLLLGEITIE*DSVCYE
Trigger: CTCATAGCAGACGGAGTCTCACTCTATTGTGATCTC...ACCTAGTAGAAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGGGTGGTCATCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMGGHLL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGATGACCACC...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000573968.5
ENST00000631974.1
CDS-3UTR GCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR GCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTATACCATCGAACTTTTaGCAATCAGGAGCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLIPSNF*QSGAVY
Trigger: ATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTAT...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGCATATAAAAGAGGTCTaGTATGAGGACAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWHIKEV*YEDRCC
Trigger: ACAGCATCTGTCCTCATAGCAGACCTCTTTTATATG...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000573087.5
ENST00000631896.1
CDS-3UTR CCA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTGTTCCACGCAAGAAATaGGCTAAAATCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPVPRKK*AKIPYK
Trigger: TTTATATGGGATTTTAGCCCATTTCTTGCGTGGAAC...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTTCAGAAATGCATTCTaGATGCCATCCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLFRNAF*MPSLVP
Trigger: TGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGTTCAGAAATGCATTCTaGATGCCATCCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWFRNAF*MPSLVP
Trigger: TGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTACCACTCTTCTCCATaGAAAACCTTTAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: TKCPLPTSLDENQVPRENYHSSP*KTFKLN
Trigger: ATTTAGCTTAAAGGTTTTCCATGGAGAAGAGTGGTA...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGAACGGAACTACAGGTTaGCCAGATTCTGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKNGTTG*PDSAMR
Trigger: CCTCATAGCAGAATCTGGTCAACCTGTAGTTCCGTT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTTGTTTTCAATGAAATaGGCCTGTGGACACTACATT +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLLFSMK*ACGHYI
Trigger: AATGTAGTGTCCACAGGCTCATTTCATTGAAAACAA...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAAAAGCAGCACAGAATTaGCACCCTAAAGAGGATGCC +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKKAAQN*HPKEDA
Trigger: GGCATCCTCTTTAGGGTGTCAATTCTGTGCTGCTTT...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp TTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCTAAAAACGGAACTACAGGTTaGCCAGATTCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FRNAFWMPSLVPRKKWAKNGTTG*PDSVVP
Trigger: TGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTT...TTTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR GCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTGGAAAATGGACTCTTaGAATACTTCTGCATCCATA +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLWKMDS*NTSASI
Trigger: TATGGATGCAGAAGTATTGCAAGAGTCCATTTTCCA...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp CCACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTCCAGGAGGCGGAGGATaGAGTGAGCTGAGATCACAA +
Preference number: 4 (lower is better)
Translates to: PRKKWAKIPYKRGIVLSFPGGGG*SELRSQ
Trigger: TTGTGATCTCAGCTCACTGCATCCTCCGCCTCCTGG...AAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR CCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTGTTCCACGCAAGAAATaGGCTAAAATCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLVPRKK*AKIPYK
Trigger: TTTATATGGGATTTTAGCCCATTTCTTGCGTGGAAC...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CCA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGTTCCACGCAAGAAATaGGCTAAAATCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWVPRKK*AKIPYK
Trigger: TTTATATGGGATTTTAGCCCATTTCTTGCGTGGAAC...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTCATATAAAAGCGCTATaGACTACACGTGACAATTCT +
Preference number: 4 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLHIKAL*TTRDNS
Trigger: AGAATTGTCACGTGTAGTCCATAGCGCTTTTATATG...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGCATTTAGTTCATGGATaGGAAACTGTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMHLVHG*ETVCPT
Trigger: CGTTGGACAGACAGTTTCTCATCCATGAACTAAATG...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp CTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTTTCTTCTACTAGGTAAAAGAGGTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: LFCSSFLRWSSIGFLLLGKRGLL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGACCTCTTTT...ACCTAGTAGAAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573087.5
ENST00000631896.1
CDS-3UTR GCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAAACAGCCTTCAACTCTaGCACAGTCGCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKNSLQL*HSRHFS
Trigger: TGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTT...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGAACAGCCTTCAACTCTaGCACAGTCGCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKNSLQL*HSRHFS
Trigger: TGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACAACGGAACTACAGGTTaGCCAGATTCTGCTATGAGG +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNNGTTG*PDSAMR
Trigger: CCTCATAGCAGAATCTGGTCAACCTGTAGTTCCGTT...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575073.5
ENST00000632623.1
CDS-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGCATTTAGTTCATGGATaGGAAACTGTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKHLVHG*ETVCPT
Trigger: CGTTGGACAGACAGTTTCTCATCCATGAACTAAATG...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAGTCAGTTGTTTTCAATaGAATGAGCCTGTGGACACT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKVSCFQ*NEPVDT
Trigger: AGTGTCCACAGGCTCATTTCATTGAAAACAACTGAC...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGGTAAGAAGTGAACACTaGCTAGCATTGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKVRSEH*LALPNR
Trigger: TCTGTTTGGCAATGCTAGTCAGTGTTCACTTCTTAC...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAGTAAGAAGTGAACACTaGCTAGCATTGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKVRSEH*LALPNR
Trigger: TCTGTTTGGCAATGCTAGTCAGTGTTCACTTCTTAC...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAACATGATTGCAATTCCTaGGGTAAACTAAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKHDCNS*GKLSVH
Trigger: GTGGACACTTAGTTTACCTCAGGAATTGCAATCATG...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGCATGATTGCAATTCCTaGGGTAAACTAAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKHDCNS*GKLSVH
Trigger: GTGGACACTTAGTTTACCTCAGGAATTGCAATCATG...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACTGCAGTGAGCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNCSELL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGCTCACTGCA...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573396.5
ENST00000634146.1
CDS-3UTR GCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTAGGTTGACCAGATTCTaGTATGAGGACAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: IYHRTFANQELSIIIVSCRLTRF*YEDRCC
Trigger: ACAGCATCTGTCCTCATAGCAGAATCTGGTCAACCT...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR GCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp CTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTTTCTTCTACTAGGTCATATAAAAGAGGTCTaGTATGAGGACAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LFCSSFLRWSSIGFLLLGHIKEV*YEDRCC
Trigger: ACAGCATCTGTCCTCATAGCAGACCTCTTTTATATG...ACCTAGTAGAAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000573087.5
ENST00000631896.1
CDS-3UTR CCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAATCCTCCTTTCTTAGGTaGTCATCCATTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKSSFLR*SSIGFL
Trigger: AAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGA...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CCA 90 bp TCTTCAATGTTAGTACTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTCCTCCTTTCTTAGGTaGTCATCCATTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: SSMLVLFCSSFLRWSSIGSSFLR*SSIGFL
Trigger: AAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGA...GCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAGTACTAACATTGAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGTCCTCCTTTCTTAGGTaGTCATCCATTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKSSFLR*SSIGFL
Trigger: AAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGA...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTCATCATCTAGGGCATTaGAAACTTCAGCTCGGATCC +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSHHLGH*KLQLGS
Trigger: GGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATG...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp TCTTCAATGTTAGTACTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: SSMLVLFCSSFLRWSSIGQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...GCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAGTACTAACATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR TCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGTTGTTTTCAATGAAATaGGCCTGTGGACACTACATT +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMLFSMK*ACGHYI
Trigger: AATGTAGTGTCCACAGGCTCATTTCATTGAAAACAA...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTGTAAGAAGTGAACACTaGCTAGCATTGCCAAACAGA +
Preference number: 4 (lower is better)
Translates to: IYHRTFANQELSIIIVSCVRSEH*LALPNR
Trigger: TCTGTTTGGCAATGCTAGTCAGTGTTCACTTCTTAC...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTCATGATTGCAATTCCTaGGGTAAACTAAGTGTCCAC +
Preference number: 4 (lower is better)
Translates to: IYHRTFANQELSIIIVSCHDCNS*GKLSVH
Trigger: GTGGACACTTAGTTTACCTCAGGAATTGCAATCATG...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTTGCAGTGAGCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSCSELL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGCTCACTGCA...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000573396.5
ENST00000634146.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACAACGGAACTACAGGTTaGCCAGATTCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNNGTTG*PDSVVP
Trigger: TGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTT...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTAGACTCCGTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSRLRLL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGACGGAGTCT...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR GCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACAACAGCCTTCAACTCTaGCACAGTCGCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNNSLQL*HSRHFS
Trigger: TGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTT...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR GCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACAGGTTGACCAGATTCTaGTATGAGGACAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNRLTRF*YEDRCC
Trigger: ACAGCATCTGTCCTCATAGCAGAATCTGGTCAACCT...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575073.5
ENST00000632623.1
CDS-3UTR GCA 90 bp TCTTCAATGTTAGTACTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: SSMLVLFCSSFLRWSSIGALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...GCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAGTACTAACATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR GCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAATACCATCGAACTTTTaGCAATCAGGAGCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKIPSNF*QSGAVY
Trigger: ATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTAT...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGTGGAAAATGGACTCTTaGAATACTTCTGCATCCATA +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMWKMDS*NTSASI
Trigger: TATGGATGCAGAAGTATTGCAAGAGTCCATTTTCCA...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp TCTTCAATGTTAGTACTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTTCAGAAATGCATTCTaGATGCCATCCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: SSMLVLFCSSFLRWSSIGFRNAF*MPSLVP
Trigger: TGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA...GCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAGTACTAACATTGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATTACCACTCTTCTCCATaGAAAACCTTTAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYYHSSP*KTFKLN
Trigger: ATTTAGCTTAAAGGTTTTCCATGGAGAAGAGTGGTA...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGCATATAAAAGCGCTATaGACTACACGTGACAATTCT +
Preference number: 4 (lower is better)
Translates to: AIFEKSLSGISPKACLFMHIKAL*TTRDNS
Trigger: AGAATTGTCACGTGTAGTCCATAGCGCTTTTATATG...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTGACCAGATTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSDQILL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGAATCTGGTC...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575073.5
ENST00000632623.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACCATTTAGTTCATGGATaGGAAACTGTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNHLVHG*ETVCPT
Trigger: CGTTGGACAGACAGTTTCTCATCCATGAACTAAATG...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000575073.5
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp CCACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTAACGGAACTACAGGTTaGCCAGATTCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRKKWAKIPYKRGIVLSFNGTTG*PDSVVP
Trigger: TGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTT...AAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTAACGGAACTACAGGTTaGCCAGATTCTGTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSNGTTG*PDSVVP
Trigger: TGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTT...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACAAAAGAGGTCTGCTATaGGGACAGATGCTGTATACT +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNKRGLL*GQMLYT
Trigger: AGTATACAGCATCTGTCCTCATAGCAGACCTCTTTT...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000573087.5
ENST00000631896.1
CDS-3UTR GCA 90 bp CCACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTAACAGCCTTCAACTCTaGCACAGTCGCCATTTTTCA +
Preference number: 4 (lower is better)
Translates to: PRKKWAKIPYKRGIVLSFNSLQL*HSRHFS
Trigger: TGAAAAATGGCGACTGTGGCAGAGTTGAAGGCTGTT...AAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR GCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTAGGTTGACCAGATTCTaGTATGAGGACAGATGCTGT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSRLTRF*YEDRCC
Trigger: ACAGCATCTGTCCTCATAGCAGAATCTGGTCAACCT...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575073.5
ENST00000632623.1
CDS-3UTR GCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTATACCATCGAACTTTTaGCAATCAGGAGCTGTCTAT +
Preference number: 4 (lower is better)
Translates to: IYHRTFANQELSIIIVSCIPSNF*QSGAVY
Trigger: ATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTAT...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTTTCAGAAATGCATTCTaGATGCCATCCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: IYHRTFANQELSIIIVSCFRNAF*MPSLVP
Trigger: TGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAACATATAAAAGCGCTATaGACTACACGTGACAATTCT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKHIKAL*TTRDNS
Trigger: AGAATTGTCACGTGTAGTCCATAGCGCTTTTATATG...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp CACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTGATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGT +
Preference number: 4 (lower is better)
Translates to: HARNGLKSHIKEVLYYPLIRRFS*DNDGRG
Trigger: ACCCCGACCATCATTGTCTCATGAAAACCTTCTAAT...CAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTCATTTAGTTCATGGATaGGAAACTGTCTGTCCAACG +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSHLVHG*ETVCPT
Trigger: CGTTGGACAGACAGTTTCTCATCCATGAACTAAATG...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000575073.5
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR TCA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTTTGTTTTCAATGAAATaGGCCTGTGGACACTACATT +
Preference number: 4 (lower is better)
Translates to: IYHRTFANQELSIIIVSCLFSMK*ACGHYI
Trigger: AATGTAGTGTCCACAGGCTCATTTCATTGAAAACAA...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR GCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAAAGCCTGTCTCTTCATaGTTACTTCACATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKKPVSS*LLHILY
Trigger: ATAAAGAATGTGAAGTAAGCATGAAGAGACAGGCTT...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR GCA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGAAGCCTGTCTCTTCATaGTTACTTCACATTCTTTAT +
Preference number: 4 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKKPVSS*LLHILY
Trigger: ATAAAGAATGTGAAGTAAGCATGAAGAGACAGGCTT...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACTTCAGAAATGCATTCTaGATGCCATCCTTAGTTCCA +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNFRNAF*MPSLVP
Trigger: TGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTTCCTCCTTTCTTAGGTaGTCATCCATTGGCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSSSFLR*SSIGFL
Trigger: AAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGA...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAATACCACTCTTCTCCATaGAAAACCTTTAAGCTAAAT +
Preference number: 4 (lower is better)
Translates to: KEDANFANYSSYHSSPWKYHSSP*KTFKLN
Trigger: ATTTAGCTTAAAGGTTTTCCATGGAGAAGAGTGGTA...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR TCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTCAAAGCATTATCTGTTaGCTGCCTGAGAAACATGAA +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSQSIIC*LPEKHE
Trigger: TTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTG...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR GCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTGCATTATCTGTTGACTaGCTGAGAAACATGAAGATC +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSALSVD*LRNMKI
Trigger: GATCTTCATGTTTCTCAGGCAGTCAACAGATAATGC...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR CCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACGTTCCACGCAAGAAATaGGCTAAAATCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNVPRKK*AKIPYK
Trigger: TTTATATGGGATTTTAGCCCATTTCTTGCGTGGAAC...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTGTTCCACGCAAGAAATaGGCTAAAATCCCATATAAA +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSVPRKK*AKIPYK
Trigger: TTTATATGGGATTTTAGCCCATTTCTTGCGTGGAAC...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CCA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACTCCTCCTTTCTTAGGTaGTCATATTGTATTATCCTT +
Preference number: 4 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNSSFLR*SYCIIL
Trigger: AAGGATAATACAATATGACCACCTAAGAAAGGAGGA...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000573396.5
ENST00000575073.5
ENST00000632623.1
ENST00000634146.1
CDS-3UTR CCA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTTCCTCCTTTCTTAGGTaGTCATATTGTATTATCCTT +
Preference number: 4 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSSSFLR*SYCIIL
Trigger: AAGGATAATACAATATGACCACCTAAGAAAGGAGGA...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000573396.5
ENST00000575073.5
ENST00000632623.1
ENST00000634146.1
CDS-3UTR CAA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATCCACTGCCAACATCCTaGGACGAAAACCAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: TKCPLPTSLDENQVPRENPLPTS*DENQVP
Trigger: GGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGG...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGCAACGGAACTACAGGTaGACCAGATTCTGCTATGAG +
Preference number: 5 (lower is better)
Translates to: QTSRGLALFWLICDCTTEQRNYR*TRFCYE
Trigger: CTCATAGCAGAATCTGGTCAACCTGTAGTTCCGTTG...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CAA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGCTTTCTTCTACTAGGTaGTCTGCCAAGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: QTSRGLALFWLICDCTTELSSTR*SAKTWV
Trigger: GACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAG...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CAA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: QTSRGLALFWLICDCTTESSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp ACTAAGTGTCCACTGCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATCTTTCTTCTACTAGGTaGTCTGCCAAGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: TKCPLPTSLDENQVPRENLSSTR*SAKTWV
Trigger: GACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAG...ATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGGACACTTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CAA 90 bp CAAACAAGTAGGGGGCTGGCCCTCTTCTGGCTCATCTGTGATTGCACAACCGAGAAGAGGATGCCAATTTaGCTAACTACAGCTCTTACC +
Preference number: 5 (lower is better)
Translates to: QTSRGLALFWLICDCTTEKRMPI*LTTALT
Trigger: GGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTT...CTCGGTTGTGCAATCACAGATGAGCCAGAAGAGGGCCAGCCCCCTACTTGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTCTTTCTTCTACTAGGTaGTCTGCCAAGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPLSSTR*SAKTWV
Trigger: GACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAG...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATCCACTGCCAACATCCTaGGACGAAAACCAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYPLPTS*DENQVP
Trigger: GGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGG...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGCTTTCTTCTACTAGGTaGTCTGCCAAGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWLSSTR*SAKTWV
Trigger: GACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAG...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGCCACTGCCAACATCCTaGGACGAAAACCAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: AIFEKSLSGISPKACLFMPLPTS*DENQVP
Trigger: GGGGACTTGGTTTTCGTCCAAGGATGTTGGCAGTGG...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS TCA 90 bp CATGAGACAATGATGGTCGGGGTTCACGGTCATCATCTAGGGCATTaGAAACTTCAGCTCGGATCCTTGCTTTTAAATGCCCTAATACCC +
Preference number: 5 (lower is better)
Translates to: HETMMVGVHGHHLGH*KLQLGSLLLNALIP
Trigger: GGGTATTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGACCGTGAACCCCGACCATCATTGTCTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000255759.11
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000573429.5
ENST00000573968.5
ENST00000575073.5
ENST00000622266.2
ENST00000631896.1
ENST00000631974.1
ENST00000632623.1
ENST00000633954.1
ENST00000633985.1
ENST00000634146.1
CDS-3UTR CAA 90 bp GGTCTGAAGGCTGAAGTGAAGGCCCTTTCAGAAATGCATTCTGGATGCCATCCTCTTCAGCTCGGATCCTaGCTTTTAAATGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: GLKAEVKALSEMHSGCHPLQLGS*LLNALI
Trigger: TATTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAG...AGGATGGCATCCAGAATGCATTTCTGAAAGGGCCTTCACTTCAGCCTTCAGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GGCCCTTTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: GPFRNAFWMPSLVPRKKWSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...CCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAAAGGGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATCAACGGAACTACAGGTaGACCAGATTCTGCTATGAG +
Preference number: 5 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYQRNYR*TRFCYE
Trigger: CTCATAGCAGAATCTGGTCAACCTGTAGTTCCGTTG...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CAA 90 bp TCTTCAATGTTAGTACTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCGTTGTCTGCCAAGACTaGGGTCTGAAGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: SSMLVLFCSSFLRWSSIGVVCQD*GLKAEV
Trigger: CACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAAC...GCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAGTACTAACATTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGGTTGTCTGCCAAGACTaGGGTCTGAAGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKVVCQD*GLKAEV
Trigger: CACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAAC...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CAA 90 bp CTCATCTGTGATTGCACAACCGAGGGCCACACGGAGATTAAACAATGCCATCTTTATACCATCGAACTTTaGCCAATCAGGAGCTGTCTA +
Preference number: 5 (lower is better)
Translates to: LICDCTTEGHTEIKQCHLYTIEL*PIRSCL
Trigger: TAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATA...AAGATGGCATTGTTTAATCTCCGTGTGGCCCTCGGTTGTGCAATCACAGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp AATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCTAAAATCCCACAACGGAACTACAGGTaGACCAGATTCTGTAGTTCC +
Preference number: 5 (lower is better)
Translates to: NAFWMPSLVPRKKWAKIPQRNYR*TRFCSS
Trigger: GGAACTACAGAATCTGGTCAACCTGTAGTTCCGTTG...TGGGATTTTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp ATATACCATCGAACTTTTGCCAATCAGGAGCTGTCTATCATCATAGTCAGTTGTGTTGTCTGCCAAGACTaGGGTCTGAAGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: IYHRTFANQELSIIIVSCVVCQD*GLKAEV
Trigger: CACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAAC...ACAACTGACTATGATGATAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000255759.11
ENST00000622266.2
CDS-3UTR CAA 90 bp TTCAGAAATGCATTCTGGATGCCATCCTTAGTTCCACGCAAGAAATGGGCTAAACTTTCTTCTACTAGGTaGTCTGCCAAGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: FRNAFWMPSLVPRKKWAKLSSTR*SAKTWV
Trigger: GACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAG...TTTAGCCCATTTCTTGCGTGGAACTAAGGATGGCATCCAGAATGCATTTCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR CAA 90 bp CTTTTCTGTTCCTCCTTTCTTAGGTGGTCATCCATTGGCTTTCTTCTACTAGGTCTTTCTTCTACTAGGTaGTCTGCCAAGACTTGGGTC +
Preference number: 5 (lower is better)
Translates to: LFCSSFLRWSSIGFLLLGLSSTR*SAKTWV
Trigger: GACCCAAGTCTTGGCAGACAACCTAGTAGAAGAAAG...ACCTAGTAGAAGAAAGCCAATGGATGACCACCTAAGAAAGGAGGAACAGAAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATCTTCAGCTCGGATCCTaGCTTTTAAATGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYLQLGS*LLNALI
Trigger: TATTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAG...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACGTTGTCTGCCAAGACTaGGGTCTGAAGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNVVCQD*GLKAEV
Trigger: CACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAAC...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000631896.1
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATTATACCATCGAACTTTaGCCAATCAGGAGCTGTCTA +
Preference number: 5 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYYTIEL*PIRSCL
Trigger: TAGACAGCTCCTGATTGGCAAAAGTTCGATGGTATA...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp AAAGAGGATGCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAATCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: KEDANFANYSSYHSSPWKSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...TTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp CCACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTGTTGTCTGCCAAGACTaGGGTCTGAAGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: PRKKWAKIPYKRGIVLSFVVCQD*GLKAEV
Trigger: CACTTCAGCCTTCAGACCCAAGTCTTGGCAGACAAC...AAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR CAA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGAAGAGGATGCCAATTTaGCTAACTACAGCTCTTACC +
Preference number: 5 (lower is better)
Translates to: AIFEKSLSGISPKACLFMKRMPI*LTTALT
Trigger: GGTAAGAGCTGTAGTTAGCAAAATTGGCATCCTCTT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp GCCAACATCCTTGGACGAAAACCAAGTCCCCCGGGAGAATTCAGATATTTATATATGGAAAATGGACTCTaGCAATACTTCTGCATCCAT +
Preference number: 5 (lower is better)
Translates to: ANILGRKPSPPGEFRYLYMENGL*QYFCIH
Trigger: ATGGATGCAGAAGTATTGCAAGAGTCCATTTTCCAT...ATATAAATATCTGAATTCTCCCGGGGGACTTGGTTTTCGTCCAAGGATGTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGCTTCAGCTCGGATCCTaGCTTTTAAATGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKLQLGS*LLNALI
Trigger: TATTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAG...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACCAACGGAACTACAGGTaGACCAGATTCTGCTATGAG +
Preference number: 5 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNQRNYR*TRFCYE
Trigger: CTCATAGCAGAATCTGGTCAACCTGTAGTTCCGTTG...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575073.5
ENST00000632623.1
CDS-3UTR CAA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGATGGAAAATGGACTCTaGCAATACTTCTGCATCCAT +
Preference number: 5 (lower is better)
Translates to: AIFEKSLSGISPKACLFMMENGL*QYFCIH
Trigger: ATGGATGCAGAAGTATTGCAAGAGTCCATTTTCCAT...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR CAA 90 bp GCCATCTTTGAAAAATCCCTTTCTGGTATTTCTCCCAAAGCCTGTCTCTTCATGGGGCCTCCCAAAATGTaGTGTAAGTATAGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: AIFEKSLSGISPKACLFMGPPKM*CKYSLN
Trigger: ATTTAAACTATACTTACACAACATTTTGGGAGGCCC...CATGAAGAGACAGGCTTTGGGAGAAATACCAGAAAGGGATTTTTCAAAGATGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTCAACGGAACTACAGGTaGACCAGATTCTGTAGTTCC +
Preference number: 5 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSQRNYR*TRFCSS
Trigger: GGAACTACAGAATCTGGTCAACCTGTAGTTCCGTTG...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000633954.1
ENST00000634146.1
CDS-3UTR CAA 90 bp TTTAAGACAAAAGATACCCCAAACAAAGCATTATCTGTTGACTGCCTGAGAAACCTTCAGCTCGGATCCTaGCTTTTAAATGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: FKTKDTPNKALSVDCLRNLQLGS*LLNALI
Trigger: TATTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAG...GTTTCTCAGGCAGTCAACAGATAATGCTTTGTTTGGGGTATCTTTTGTCTTAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR CAA 90 bp CACGCAAGAAATGGGCTAAAATCCCATATAAAAGAGGTATTGTATTATCCTTTGTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: HARNGLKSHIKEVLYYPLSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...CAAAGGATAATACAATACCTCTTTTATATGGGATTTTAGCCCATTTCTTGCGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000572415.5
ENST00000633954.1
CDS-3UTR CAA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTTCATCATCTAGGGCATaGAAAACTTCAGCTCGGATC +
Preference number: 5 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSSSSRA*KTSARI
Trigger: GATCCGAGCTGAAGTTTTCAATGCCCTAGATGATGA...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS-3UTR CAA 90 bp GCCAATTTTGCTAACTACAGCTCTTACCACTCTTCTCCATGGAAAACCTTTAAGGGGCCTCCCAAAATGTaGTGTAAGTATAGTTTAAAT +
Preference number: 5 (lower is better)
Translates to: ANFANYSSYHSSPWKTFKGPPKM*CKYSLN
Trigger: ATTTAAACTATACTTACACAACATTTTGGGAGGCCC...CTTAAAGGTTTTCCATGGAGAAGAGTGGTAAGAGCTGTAGTTAGCAAAATTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000255759.11
ENST00000573968.5
ENST00000622266.2
ENST00000631974.1
CDS-3UTR CAA 90 bp AACAAAGCATTATCTGTTGACTGCCTGAGAAACATGAAGATCTTCAATGTTAGTCTTCAGCTCGGATCCTaGCTTTTAAATGCCCTAATA +
Preference number: 5 (lower is better)
Translates to: NKALSVDCLRNMKIFNVSLQLGS*LLNALI
Trigger: TATTAGGGCATTTAAAAGCAAGGATCCGAGCTGAAG...ACTAACATTGAAGATCTTCATGTTTCTCAGGCAGTCAACAGATAATGCTTTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000575073.5
ENST00000631896.1
ENST00000632623.1
ENST00000633954.1
ENST00000634146.1
CDS TCA 90 bp AATTCTAAATACTCTCGAATTAATTCATTAATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGTTCACGGTCATCATCTAGGGCATTG +
Preference number: 5 (lower is better)
Translates to: NSKYSRINSLIRRFS*DNDGRGSRSSSRAL
Trigger: CAATGCCCTAGATGATGACCGTGAACCCCGACCATCATTGTCTCATGAAAACCTTCTAATTAATGAATTAATTCGAGAGTATTTAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 14 transcripts:
ENST00000255759.11
ENST00000572415.5
ENST00000573087.5
ENST00000573396.5
ENST00000573429.5
ENST00000573968.5
ENST00000575073.5
ENST00000622266.2
ENST00000631896.1
ENST00000631974.1
ENST00000632623.1
ENST00000633954.1
ENST00000633985.1
ENST00000634146.1
CDS TCA 90 bp AATTCTAAATACTCTCGAATTAATTCATTAATTAGAAGGTTTTCATaGGACAATGATGGTCGGGGTTCACGGTCATCATCAGCCTTCAAC +
Preference number: 5 (lower is better)
Translates to: NSKYSRINSLIRRFS*DNDGRGSRSSSAFN
Trigger: GTTGAAGGCTGATGATGACCGTGAACCCCGACCATCATTGTCTCATGAAAACCTTCTAATTAATGAATTAATTCGAGAGTATTTAGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000575938.1
ENST00000634203.1
CDS TCA 72 bp TGGATGAGAAACTGTCTGTCCAACGGAACTACAGGTTaGCCAGATTCTGTAGTTCCAGGTACTCGGGAGGCT +
Preference number: 6 (lower is better)
Translates to: WMRNCLSNGTTG*PDSVVPGTREA
Trigger: AGCCTCCCGAGTACCTGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTTGGACAGACAGTTTCTCATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000573429.5
ENST00000633954.1
ENST00000633985.1
ENST00000634146.1
CDS CAA 72 bp ATGGATGAGAAACTGTCTGTCCAACGGAACTACAGGTaGACCAGATTCTGTAGTTCCAGGTACTCGGGAGGC +
Preference number: 6 (lower is better)
Translates to: MDEKLSVQRNYR*TRFCSSRYSGG
Trigger: GCCTCCCGAGTACCTGGAACTACAGAATCTGGTCAACCTGTAGTTCCGTTGGACAGACAGTTTCTCATCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000572415.5
ENST00000573396.5
ENST00000573429.5
ENST00000633954.1
ENST00000633985.1
ENST00000634146.1