RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP192 (Homo sapiens)

Ensembl gene IDs: ENSG00000101639

Ensembl transcript IDs: ENST00000325971.12, ENST00000430049.6, ENST00000506447.5, ENST00000507064.2, ENST00000508150.2, ENST00000510237.5, ENST00000511820.6, ENST00000513183.1, ENST00000513432.5, ENST00000585938.1, ENST00000589596.5, ENST00000589993.5

Found 683 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTaGTCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCC +
Preference number: 1 (lower is better)
Translates to: IKCSGRTVHGSSEAS*SRGGRAARERRGEP
Trigger: GGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR GCA 90 bp CCGCTGAGCAAAAGGAGCAGCGCTGAGAGAGGGTTGTGTCAAGAGTaGGTGCACAGCAGCAGGCATGTTCTGCATGTCAGCCACAGAGCT +
Preference number: 1 (lower is better)
Translates to: PLSKRSSAERGLCQE*VHSSRHVLHVSHRA
Trigger: AGCTCTGTGGCTGACATGCAGAACATGCCTGCTGCTGTGCACGCACTCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTGCTCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 90 bp GCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAG +
Preference number: 1 (lower is better)
Translates to: AGEPPVREEENPEDL*LVKHPKRRCHHVSQ
Trigger: CTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR GCA 90 bp CTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGCAATaGGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTA +
Preference number: 1 (lower is better)
Translates to: LSGATHPCCGVTVRQ*AGQHSSNLSNLTEL
Trigger: TAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR GCA 90 bp ACTCTCGGCAATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTaGCTGTACGATGGTCTCAGCATCTGTCGAACATGGCCAAGAAGC +
Preference number: 1 (lower is better)
Translates to: TLGNGSESDGAGQSF*LYDGLSICRTWPRS
Trigger: GCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCGTACAGGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGCCGAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 90 bp TGTGCTTGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTaGAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTGGTCCTGCT +
Preference number: 1 (lower is better)
Translates to: CACSSGEALLKRSWP*KDSVAPAGSSSGPA
Trigger: AGCAGGACCAGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACAAGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR GCA 90 bp CTCACAAGAATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTaGGGCGTGACTGTGAGGCAATGCGCTGGCCAGCACAGCTCAAAT +
Preference number: 1 (lower is better)
Translates to: LTRICSLLSGATHPC*GVTVRQCAGQHSSN
Trigger: ATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAATTCTTGTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR TCA 90 bp GCTGCACCAAGGCTGTCTCCCCAGTCCACCTCCAAGCAAGCACATTaGCCCTTACACTCACTTGTCTTAAAAAGGACACTGACAAAGGTC +
Preference number: 1 (lower is better)
Translates to: AAPRLSPQSTSKQAH*PLHSLVLKRTLTKV
Trigger: GACCTTTGTCAGTGTCCTTTTTAAGACAAGTGAGTGTAAGGGTCAATGTGCTTGCTTGGAGGTGGACTGGGGAGACAGCCTTGGTGCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 90 bp TCCTGGAAGCTAAGCTGTAACCTCTCTCTTGGTTCAGCATCACTCTaGCTTCCGGGAGATGACCCGGATGGAACTGAAAATCTCCCTTCT +
Preference number: 1 (lower is better)
Translates to: SWKLSCNLSLGSASL*LPGDDPDGTENLPS
Trigger: AGAAGGGAGATTTTCAGTTCCATCCGGGTCATCTCCCGGAAGCCAGAGTGATGCTGAACCAAGAGAGAGGTTACAGCTTAGCTTCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR TCA 90 bp GCACACCCTGATGAACTCGTTCCAGAAATTTCACTAGGAGAAGAATaGCTCAGTGGTGACGTGGAAGGTCTGAAGCTCTCCTGCTCATCC +
Preference number: 1 (lower is better)
Translates to: AHPDELVPEISLGEE*LSGDVEGLKLSCSS
Trigger: GGATGAGCAGGAGAGCTTCAGACCTTCCACGTCACCACTGAGTCATTCTTCTCCTAGTGAAATTTCTGGAACGAGTTCATCAGGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 90 bp GGTGGCGCTAAAGATGACAGATGCCATTTCACGTCTGTGGTGCCATaGTTCTCGAGTTCTAGACAGCTCTCTGAAGTTTCACCAGGTTCT +
Preference number: 1 (lower is better)
Translates to: GGAKDDRCHFTSVVP*FSSSRQLSEVSPGS
Trigger: AGAACCTGGTGAAACTTCAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAGCGCCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR TCA 90 bp TCATTTATGGTCTCTGAAGTACAACGAGTCAAATGCTTCCTGAGTTaGATGTTCTTGCTGCACCAAGGCTGTCTCCCCAGTCCACCTCCA +
Preference number: 1 (lower is better)
Translates to: SFMVSEVQRVKCFLS*MFLLHQGCLPSPPP
Trigger: TGGAGGTGGACTGGGGAGACAGCCTTGGTGCAGCAAGAACATTCAACTCAGGAAGCATTTGACTCGTTGTACTTCAGAGACCATAAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 90 bp CCTTGTCATTTATGGTCTCTGAAGTACAACGAGTCAAATGCTTCCTaGGTTGAATGTTCTTGCTGCACCAAGGCTGTCTCCCCAGTCCAC +
Preference number: 1 (lower is better)
Translates to: PCHLWSLKYNESNAS*VECSCCTKAVSPVH
Trigger: GTGGACTGGGGAGACAGCCTTGGTGCAGCAAGAACATTCAACTCAGGAAGCATTTGACTCGTTGTACTTCAGAGACCATAAATGACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 90 bp CATAAGGTGGCGCTAAAGATGACAGATGCCATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTAGACAGCTCTCTGAAGTTTCACCAG +
Preference number: 1 (lower is better)
Translates to: HKVALKMTDAISRLW*HDSRVLDSSLKFHQ
Trigger: CTGGTGAAACTTCAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAGCGCCACCTTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR GCA 90 bp GAAGGTCTGAAGCTCTCCTGCTCATCCTCTGAGCCACGTCCACCATaGTCAGGAGAGGTATTTTTCAAATCACTATTTTTAGGTGAGACT +
Preference number: 1 (lower is better)
Translates to: EGLKLSCSSSEPRPP*SGEVFFKSLFLGET
Trigger: AGTCTCACCTAAAAATAGTGATTTGAAAAATACCTCTCCTGAGCATGGTGGACGTGGCTCAGAGGATGAGCAGGAGAGCTTCAGACCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 90 bp GTGTTCTACCTAGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTaGACAAAATCGATGGAATATCTAAGCAAGGTCCAGGTGACAGAG +
Preference number: 1 (lower is better)
Translates to: VFYLEGLLPKPEIVC*TKSMEYLSKVQVTE
Trigger: CTCTGTCACCTGGACCTTGCTTAGATATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCTAGGTAGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 90 bp GTGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGG +
Preference number: 1 (lower is better)
Translates to: VCNKRIISQIDFKCP*FPHTSRPEPVHILW
Trigger: CCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR GCA 90 bp CTTGCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTG +
Preference number: 1 (lower is better)
Translates to: LAFICLNDKQSFKFA*GLRFELHGHVDVML
Trigger: CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR GCA 90 bp GCTACAGCGTTAGCATTAATAATCAGTCTAATTGGCACAGTGGCATaGGTTCGGTTTATCAATTTTAGTGGGAGGGCTTTCCAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: ATALALIISLIGTVA*VRFINFSGRAFQPP
Trigger: TGGAGGCTGGAAAGCCCTCCCACTAAAATTGATAAACCGAACGCATGCCACTGTGCCAATTAGACTGATTATTAATGCTAACGCTGTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 90 bp GCTTCACCAATTAGTCGAATAGCAATACTCTTGCCTTCATCTGTTTaGATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTG +
Preference number: 1 (lower is better)
Translates to: ASPISRIAILLPSSV*MTSKASNLPADFGL
Trigger: CAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAAGAGTATTGCTATTCGACTAATTGGTGAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR TCA 90 bp ACATCATTTTCATCCACTTGTGAAGTACTCTCTACTGCTTCAACCTaGAGTGTAATTGATCCTTCACTTAGCTGTGCCTGGGACTGTTCA +
Preference number: 1 (lower is better)
Translates to: TSFSSTCEVLSTAST*SVIDPSLSCAWDCS
Trigger: TGAACAGTCCCAGGCACAGCTAAGTGAAGGATCAATTACACTTCAGGTTGAAGCAGTAGAGAGTACTTCACAAGTGGATGAAAATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 90 bp TTGTCTCTGGTTTTATTTGAAAGTGCCTTGATCATTGCAGCAAGTTaGGAAGGATCAGTATTAACTGATGCCTCTGCAATGGCTGAAGCA +
Preference number: 1 (lower is better)
Translates to: LSLVLFESALIIAAS*EGSVLTDASAMAEA
Trigger: TGCTTCAGCCATTGCAGAGGCATCAGTTAATACTGATCCTTCCCAACTTGCTGCAATGATCAAGGCACTTTCAAATAAAACCAGAGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 90 bp CTCGTATTTCTTCACAGTCTTTTAACAGACAAAGGGATGTTATTCTaGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTG +
Preference number: 1 (lower is better)
Translates to: LVFLHSLLTDKGMLF*GSSLMNNYQMEWKL
Trigger: CAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAACATCCCTTTGTCTGTTAAAAGACTGTGAAGAAATACGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGCGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 2 (lower is better)
Translates to: SSARVGQSTALRRPADPERASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR-3UTR TCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCCGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 2 (lower is better)
Translates to: GATRIKCSGRTVHGSSEARASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR-3UTR TCA 90 bp ACAGGACTCTCGGCAATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTGCCGGTGGTGCTTCCAGTTaGAGGGAGTGTTCCCAAATA +
Preference number: 2 (lower is better)
Translates to: TGLSAMAVRVTVLAKASAGGASS*RECSQI
Trigger: TATTTGGGAACACTCCCTTCAACTGGAAGCACCACC...GGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGCCGAGAGTCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR GCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTCATCCAAAGAGACGTTaGCACCATGTTTCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: LPESSARVGQSTALRRPAHPKRR*HHVSQK
Trigger: CTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATG...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR-3UTR CCA 90 bp TGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGGTTCAGCATCACTCTaGCTTCCGGGAGATGACCCG +
Preference number: 2 (lower is better)
Translates to: CSSGEALLKRSWPCKDSVGSASL*LPGDDP
Trigger: CGGGTCATCTCCCGGAAGCCAGAGTGATGCTGAACC...TACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR-3UTR GCA 90 bp CTGTACGATGGTCTCAGCATCTGTCGAACATGGCCAAGAAGCAACACTGAATGTAAGGGAGACAACTCCTaGTCACAGGGAGGCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LYDGLSICRTWPRSNTECKGDNS*SQGGCC
Trigger: GCAGCAGCCTCCCTGTGAGCAGGAGTTGTCTCCCTT...ACATTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR GCA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCAC +
Preference number: 2 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLATRIK*SGRTVH
Trigger: GTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGC...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR CCA 90 bp CCCAGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTCCACCAGGCAGACGATaGCCACTAAGAGGCACGAGG +
Preference number: 2 (lower is better)
Translates to: PRTGWYKKHFYLFCGMRSPPGRR*PLRGTR
Trigger: CCTCGTGCCTCTTAGTGGCCATCGTCTGCCTGGTGG...AGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585938.1
3UTR CAA 90 bp TACCTTTTCACCATTAACACTAATGCTGAGGACCCCAATGCTGACTaGCAGCCAGCGGTCAGTTGGATTAAGCACACTGAGGAGGGTCTG +
Preference number: 2 (lower is better)
Translates to: YLFTINTNAEDPNAD*QPAVSWIKHTEEGL
Trigger: CAGACCCTCCTCAGTGTGCTTAATCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTCCTCAGCATTAGTGTTAATGGTGAAAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CAA 90 bp TGCTGCACCAAGGCTGTCTCCCCAGTCCACCTCCAAGCAAGCACATaGACCCTTACACTCACTTGTCTTAAAAAGGACACTGACAAAGGT +
Preference number: 2 (lower is better)
Translates to: CCTKAVSPVHLQAST*TLTLTCLKKDTDKG
Trigger: ACCTTTGTCAGTGTCCTTTTTAAGACAAGTGAGTGTAAGGGTCAATGTGCTTGCTTGGAGGTGGACTGGGGAGACAGCCTTGGTGCAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp ACAGGACTCTCGGCAATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTGCCGTTCTAAATGACTCTTaGTTCTCACTCTCTCCATTT +
Preference number: 2 (lower is better)
Translates to: TGLSAMAVRVTVLAKASAVLNDS*FSLSPF
Trigger: AAATGGAGAGAGTGAGAATCAAGAGTCATTTAGAAC...GGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGCCGAGAGTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTACATCATTAGGTCGTTaGGGAAGATCATATACTTCA +
Preference number: 2 (lower is better)
Translates to: LPESSARVGQSTALRRPATSLGR*GRSYTS
Trigger: TGAAGTATATGATCTTCCCCAACGACCTAATGATGT...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR-3UTR CCA 90 bp CTAAAGATGACAGATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAACACAGGGTGTGATGTaGCTGACCCCACCTGACAGC +
Preference number: 2 (lower is better)
Translates to: LKMTDAISRLWCHDSRVLTQGVM*LTPPDS
Trigger: GCTGTCAGGTGGGGTCAGCCACATCACACCCTGTGT...TAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp AGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTGGACAAAATCGATGGAATAGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGG +
Preference number: 2 (lower is better)
Translates to: RGTPPQARNCLLDKIDGIDFKCP*FPHTSR
Trigger: CCGACTAGTGTGGGGGAATCACGGACACTTAAAGTC...TATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp TCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTTTTGCTGAGAGCATTTaGCAAACGTTGACTTTCCAC +
Preference number: 2 (lower is better)
Translates to: SSGEALLKRSWPCKDSVAFAESI*QTLTFH
Trigger: GTGGAAAGTCAACGTTTGTCAAATGCTCTCAGCAAA...AGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR-3UTR TCA 90 bp TCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTAAGCTGACTGTTTGCTaGGAGCATTTGACAAACGTT +
Preference number: 2 (lower is better)
Translates to: SSGEALLKRSWPCKDSVAKLTVC*EHLTNV
Trigger: AACGTTTGTCAAATGCTCTCAGCAAACAGTCAGCTT...AGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR-3UTR GCA 90 bp TTTGTTGTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTGGCGCGACACATCCATaGTGCGGCGTGACTGTGAGG +
Preference number: 2 (lower is better)
Translates to: FVVNGTCLHINYCTVILSGATHP*CGVTVR
Trigger: CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCC...AGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGACAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp TGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTATGGACCAGAAACTCATaGGATATCAAGAGACAGTTC +
Preference number: 2 (lower is better)
Translates to: CSSGEALLKRSWPCKDSVWTRNS*DIKRQF
Trigger: GAACTGTCTCTTGATATCTCATGAGTTTCTGGTCCA...TACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR-3UTR TCA 90 bp TGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAAACTCTAGTCACAGGTaGCTGTATTTGGAACAGACA +
Preference number: 2 (lower is better)
Translates to: CSSGEALLKRSWPCKDSVNSSHR*LYLEQT
Trigger: TGTCTGTTCCAAATACAGTCACCTGTGACTAGAGTT...TACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR-3UTR GCA 90 bp CTGAAGGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGGAAACGTCCAGTTTTTaGCATGTCACAAGGAGAAGG +
Preference number: 2 (lower is better)
Translates to: LKAQILGKEFQMVWRSNEETSSF*HVTRRR
Trigger: CCTTCTCCTTGTGACATGGCAAAAACTGGACGTTTC...CTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR GCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTA +
Preference number: 2 (lower is better)
Translates to: SFKFACGLRFELHGHVDVISRLW*HDSRVL
Trigger: TAGAACTCGAGAATCATGGCACCACAGACGTGAAAT...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR TCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGTCTACTGCTTCAACCTaGAGTGTAATTGATCCTTCA +
Preference number: 2 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMSTAST*SVIDPS
Trigger: TGAAGGATCAATTACACTTCAGGTTGAAGCAGTAGA...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR GCA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTAGCGACACATCCATGCTaGGGCGTGACTGTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: KEFQMVWRSNELKVPLELATHPC*GVTVRQ
Trigger: TTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGC...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR GCA 90 bp AGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTGGACAAAATCGATGGAATAAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTG +
Preference number: 2 (lower is better)
Translates to: RGTPPQARNCLLDKIDGISFKFA*GLRFEL
Trigger: CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT...TATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CAA 90 bp GCAATGGTGCTGATCCTAAGCATAGAATCACCACTATCTGGTAGCTaGTCTTTGTATCTTTGGGGTTTGTTGCTCATGAAGAAAGTGTCC +
Preference number: 2 (lower is better)
Translates to: AMVLILSIESPLSGS*SLYLWGLLLMKKVS
Trigger: GGACACTTTCTTCATGAGCAACAAACCCCAAAGATACAAAGACAAGCTACCAGATAGTGGTGATTCTATGCTTAGGATCAGCACCATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAACATCATTAGGTCGTTaGGGAAGATCATATACTTCA +
Preference number: 2 (lower is better)
Translates to: SFKFACGLRFELHGHVDVTSLGR*GRSYTS
Trigger: TGAAGTATATGATCTTCCCCAACGACCTAATGATGT...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR CCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTCACTTAGCTGTGCCTaGGACTGTTCATTTAAATCT +
Preference number: 2 (lower is better)
Translates to: AFICLNDKQSFKFACGLRSLSCA*DCSFKS
Trigger: AGATTTAAATGAACAGTCCCAGGCACAGCTAAGTGA...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CAA 90 bp GTGCTGATCCTAAGCATAGAATCACCACTATCTGGTAGCTTGTCTTaGTATCTTTGGGGTTTGTTGCTCATGAAGAAAGTGTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: VLILSIESPLSGSLS*YLWGLLLMKKVSSV
Trigger: AACAGAGGACACTTTCTTCATGAGCAACAAACCCCAAAGATACAAAGACAAGCTACCAGATAGTGGTGATTCTATGCTTAGGATCAGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp CTGCACAAATATTTTCAAGATCCTTTCCTCGCAGGCTTCAGGATCCTTTGGAGTTTAATGGCTTCACACTaGAAATCAAGTAGAATCACC +
Preference number: 2 (lower is better)
Translates to: LHKYFQDPFLAGFRILWSLMASH*KSSRIT
Trigger: GGTGATTCTACTTGATTTTCAGTGTGAAGCCATTAA...ACTCCAAAGGATCCTGAAGCCTGCGAGGAAAGGATCTTGAAAATATTTGTGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR GCA 90 bp GATTCCTTGGAAAACGTGAAACAGCGCCAGGCTACAGCGTTAGCATTAATAATCAGAACATCTGAATGCTaGATAGGTAGCTCTAAAAAC +
Preference number: 2 (lower is better)
Translates to: DSLENVKQRQATALALIIRTSEC*IGSSKN
Trigger: GTTTTTAGAGCTACCTATGCAGCATTCAGATGTTCT...GATTATTAATGCTAACGCTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CAA 90 bp GGTATTGTGAACTTAATGCCTGGTTGTGATCGATTTCCAAGTTGTTaGATTTCTAGTCTAGCCAACATGCAAGATAATCGAGTAGGTGCA +
Preference number: 2 (lower is better)
Translates to: GIVNLMPGCDRFPSC*ISSLANMQDNRVGA
Trigger: TGCACCTACTCGATTATCTTGCATGTTGGCTAGACTAGAAATCAAACAACTTGGAAATCGATCACAACCAGGCATTAAGTTCACAATACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR TCA 90 bp CTTGTTTCTTATTTCAACTTTTGTGGAAGGCGGTTTTGTCATTGGTTTGACCAAGGGGTTTGTTGCTCATaGAGAAAGTGTCCTCTGTTT +
Preference number: 2 (lower is better)
Translates to: LVSYFNFCGRRFCHWFDQGVCCS*RKCPLF
Trigger: AAACAGAGGACACTTTCTTCATGAGCAACAAACCCC...TTGGTCAAACCAATGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAAACAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CCA 90 bp CTAAAGATGACAGATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGAAAAGTCTTGTCTCTaGTTTTATTTGAAAGTGCCT +
Preference number: 2 (lower is better)
Translates to: LKMTDAISRLWCHDSRVLEKSCL*FYLKVP
Trigger: AGGCACTTTCAAATAAAACCAGAGACAAGACTTTTC...TAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR GCA 90 bp GTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTATTTGTAAGTGTCCTCTGTTTTaGCTTTATCAGCCGTTAACG +
Preference number: 2 (lower is better)
Translates to: VNGTCLHINYCTVILSICKCPLF*LYQPLT
Trigger: CGTTAACGGCTGATAAAGGCAAAACAGAGGACACTT...ACAAATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR GCA 90 bp TTATTCTGGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTGAGGCTTCACATCAACTACTaGACTGTTATTCTCTCTATT +
Preference number: 2 (lower is better)
Translates to: LFWGSSLMNNYQMEWKLRLHINY*TVILSI
Trigger: AATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAG...CCTCAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CAA 90 bp GTGGAAATTGAGGTAGCTTTTTCATCGTTACCAACATCTTGTAATTaGTTGTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTA +
Preference number: 2 (lower is better)
Translates to: VEIEVAFSSLPTSCN*LSMEHVFTSTTALL
Trigger: TAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGACAACAAATTACAAGATGTTGGTAACGATGAAAAAGCTACCTCAATTTCCAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp GCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCC +
Preference number: 3 (lower is better)
Translates to: AMSQGEGATRIK*SGRTVHGSSEA
Trigger: GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR GCA 72 bp GCGACACATCCATGCTGCGGCGTGACTGTGAGGCAATaGGCTGGCCAGCACAGCTCAAATCTCAGTAACCTC +
Preference number: 3 (lower is better)
Translates to: ATHPCCGVTVRQ*AGQHSSNLSNL
Trigger: GAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR GCA 72 bp GATAGGAGCTCTCTGGTTCAGACACATACGTCAGCCTaGTCACCCCAGCAGGCGAGCACACCAAGGGAGACA +
Preference number: 3 (lower is better)
Translates to: DRSSLVQTHTSA*SPQQASTPRET
Trigger: TGTCTCCCTTGGTGTGCTCGCCTGCTGGGGTGAGCAGGCTGACGTATGTGTCTGAACCAGAGAGCTCCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTaGGGCGTGACTGTGAGGCAATGCGCTGGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: ICSLLSGATHPC*GVTVRQCAGQH
Trigger: GTGCTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR CCA 72 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTaGGGCATAAACTCCACGAGCAGTCACATCAAGCTG +
Preference number: 3 (lower is better)
Translates to: PHTSRPEPVHIL*GINSTSSHIKL
Trigger: CAGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
3UTR CCA 72 bp GCTTGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTaGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCC +
Preference number: 3 (lower is better)
Translates to: ACSSGEALLKRS*PCKDSVAPAGS
Trigger: GGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR TCA 72 bp GTGTTCCCAAATACCGCTGAGCAAAAGGAGCAGCGCTaGGAGAGGGTTGTGTCAAGAGTGCGTGCACAGCAG +
Preference number: 3 (lower is better)
Translates to: VFPNTAEQKEQR*ERVVSRVRAQQ
Trigger: CTGCTGTGCACGCACTCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTGCTCAGCGGTATTTGGGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp AGAATTTGTAGTTTACTCTCTGGCGCGACACATCCATaGTGCGGCGTGACTGTGAGGCAATGCGCTGGCCAG +
Preference number: 3 (lower is better)
Translates to: RICSLLSGATHP*CGVTVRQCAGQ
Trigger: CTGGCCAGCGCATTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR GCA 72 bp AAAAGGAGCAGCGCTGAGAGAGGGTTGTGTCAAGAGTaGGTGCACAGCAGCAGGCATGTTCTGCATGTCAGC +
Preference number: 3 (lower is better)
Translates to: KRSSAERGLCQE*VHSSRHVLHVS
Trigger: GCTGACATGCAGAACATGCCTGCTGCTGTGCACGCACTCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp TCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTaGAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCT +
Preference number: 3 (lower is better)
Translates to: SSGEALLKRSWP*KDSVAPAGSSS
Trigger: AGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR-3UTR CAA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTACATCCAAAGAGACGTaGCCACCATGTTTCCCAGAA +
Preference number: 3 (lower is better)
Translates to: LPESSARVGQSTALRRPATSKET*PPCFPE
Trigger: TTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGT...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR GCA 72 bp AATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTaGCTGTACGATGGTCTCAGCATCTGTCGAACATGG +
Preference number: 3 (lower is better)
Translates to: NGSESDGAGQSF*LYDGLSICRTW
Trigger: CCATGTTCGACAGATGCTGAGACCATCGTACAGGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp CCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAGAGACGTTGCCACCAT +
Preference number: 3 (lower is better)
Translates to: PPVREEENPEDL*LVKHPKRRCHH
Trigger: ATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
3UTR GCA 72 bp CCATTAACACTAATGCTGAGGACCCCAATGCTGACTTaGAGCCAGCGGTCAGTTGGATTAAGCACACTGAGG +
Preference number: 3 (lower is better)
Translates to: PLTLMLRTPMLT*SQRSVGLSTLR
Trigger: CCTCAGTGTGCTTAATCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTCCTCAGCATTAGTGTTAATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CAA 90 bp GCAAAAGGAGCAGCGCTGAGAGAGGGTTGTGTCAAGAGTGCGTGCACAGCAGCACTTGTCTTTGTATCTTaGGGGTTTGTTGCTCATGAA +
Preference number: 3 (lower is better)
Translates to: AKGAALREGCVKSACTAALVFVS*GFVAHE
Trigger: TTCATGAGCAACAAACCCCAAAGATACAAAGACAAG...TGCTGCTGTGCACGCACTCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp TCCATAGCCCGTTCCTCCAATGCGGCTGGACTGCCTTaGATAATTGTGGTACTCAACTCGCTGGTGATATCA +
Preference number: 3 (lower is better)
Translates to: SIARSSNAAGLP*IIVVLNSLVIS
Trigger: TGATATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAGGAACGGGCTATGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp AGGCTGTCTCCCCAGTCCACCTCCAAGCAAGCACATTaGCCCTTACACTCACTTGTCTTAAAAAGGACACTG +
Preference number: 3 (lower is better)
Translates to: RLSPQSTSKQAH*PLHSLVLKRTL
Trigger: CAGTGTCCTTTTTAAGACAAGTGAGTGTAAGGGTCAATGTGCTTGCTTGGAGGTGGACTGGGGAGACAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 72 bp GTGGCGCTAAAGATGACAGATGCCATTTCACGTCTGTaGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTG +
Preference number: 3 (lower is better)
Translates to: VALKMTDAISRL*CHDSRVLDSSL
Trigger: CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAGCGCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR CCA 72 bp CTAAGCTGTAACCTCTCTCTTGGTTCAGCATCACTCTaGCTTCCGGGAGATGACCCGGATGGAACTGAAAAT +
Preference number: 3 (lower is better)
Translates to: LSCNLSLGSASL*LPGDDPDGTEN
Trigger: ATTTTCAGTTCCATCCGGGTCATCTCCCGGAAGCCAGAGTGATGCTGAACCAAGAGAGAGGTTACAGCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507064.2
3UTR TCA 72 bp GTCTCTGAAGTACAACGAGTCAAATGCTTCCTGAGTTaGATGTTCTTGCTGCACCAAGGCTGTCTCCCCAGT +
Preference number: 3 (lower is better)
Translates to: VSEVQRVKCFLS*MFLLHQGCLPS
Trigger: ACTGGGGAGACAGCCTTGGTGCAGCAAGAACATTCAACTCAGGAAGCATTTGACTCGTTGTACTTCAGAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp GCGCTAAAGATGACAGATGCCATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTAGACAGCTCTCTGAAG +
Preference number: 3 (lower is better)
Translates to: ALKMTDAISRLW*HDSRVLDSSLK
Trigger: CTTCAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR CAA 90 bp CTGTACGATGGTCTCAGCATCTGTCGAACATGGCCAAGAAGCAACACTGAATGTCACTCCACGGGAACATaGACTGTTTTGTGGATAAGG +
Preference number: 3 (lower is better)
Translates to: LYDGLSICRTWPRSNTECHSTGT*TVLWIR
Trigger: CCTTATCCACAAAACAGTCAATGTTCCCGTGGAGTG...ACATTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp GATGAACTCGTTCCAGAAATTTCACTAGGAGAAGAATaGCTCAGTGGTGACGTGGAAGGTCTGAAGCTCTCC +
Preference number: 3 (lower is better)
Translates to: DELVPEISLGEE*LSGDVEGLKLS
Trigger: GGAGAGCTTCAGACCTTCCACGTCACCACTGAGTCATTCTTCTCCTAGTGAAATTTCTGGAACGAGTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp AAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGGCCGGAACCTGTACAC +
Preference number: 3 (lower is better)
Translates to: KRIISQIDFKCP*FPHTSRPEPVH
Trigger: GTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR TCA 72 bp TTATGGTCTCTGAAGTACAACGAGTCAAATGCTTCCTaGGTTGAATGTTCTTGCTGCACCAAGGCTGTCTCC +
Preference number: 3 (lower is better)
Translates to: LWSLKYNESNAS*VECSCCTKAVS
Trigger: GGAGACAGCCTTGGTGCAGCAAGAACATTCAACTCAGGAAGCATTTGACTCGTTGTACTTCAGAGACCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp ATCCGTGGAAAGGCATGCGTTTTCAGGCTCATTTTCTaGTTCGATGCTTTGTCCAGAGAGTTGGAATCTCAA +
Preference number: 3 (lower is better)
Translates to: IRGKACVFRLIF*FDALSRELESQ
Trigger: TTGAGATTCCAACTCTCTGGACAAAGCATCGAAGCAGAAAATGAGCCTGAAAACGCATGCCTTTCCACGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 72 bp CTAGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTaGACAAAATCGATGGAATATCTAAGCAAGGTCCAG +
Preference number: 3 (lower is better)
Translates to: LEGLLPKPEIVC*TKSMEYLSKVQ
Trigger: CTGGACCTTGCTTAGATATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 72 bp CTGGGCAAAAATGTGATGGAGACTTTTTGGATCCCATaGCTTTCCAGCAGACCAGAAATAGGAGAACATCTG +
Preference number: 3 (lower is better)
Translates to: LGKNVMETFWIP*LSSRPEIGEHL
Trigger: CAGATGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAAGTCTCCATCACATTTTTGCCCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CAA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGTTCTTATTTCAACTTTaGTGGAAGGCGGTTTTGTCA +
Preference number: 3 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLFLFQL*WKAVLS
Trigger: TGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAA...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR-3UTR CAA 90 bp CTGAAGGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGAAAGTGTCCTCTGTTTaGCCTTTATCAGCCGTTAAC +
Preference number: 3 (lower is better)
Translates to: LKAQILGKEFQMVWRSNEKVSSV*PLSAVN
Trigger: GTTAACGGCTGATAAAGGCAAAACAGAGGACACTTT...CTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp AAAGATGACAGATGCCATTTCACGTCTGTGGTGCCATaGTTCTCGAGTTCTAGACAGCTCTCTGAAGTTTCA +
Preference number: 3 (lower is better)
Translates to: KDDRCHFTSVVP*FSSSRQLSEVS
Trigger: TGAAACTTCAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR TCA 72 bp TCATCCACTTGTGAAGTACTCTCTACTGCTTCAACCTaGAGTGTAATTGATCCTTCACTTAGCTGTGCCTGG +
Preference number: 3 (lower is better)
Translates to: SSTCEVLSTAST*SVIDPSLSCAW
Trigger: CCAGGCACAGCTAAGTGAAGGATCAATTACACTTCAGGTTGAAGCAGTAGAGAGTACTTCACAAGTGGATGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp ATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTGCACGGGCATGTTGAT +
Preference number: 3 (lower is better)
Translates to: ICLNDKQSFKFA*GLRFELHGHVD
Trigger: ATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR GCA 72 bp AAGCTCTCCTGCTCATCCTCTGAGCCACGTCCACCATaGTCAGGAGAGGTATTTTTCAAATCACTATTTTTA +
Preference number: 3 (lower is better)
Translates to: KLSCSSSEPRPP*SGEVFFKSLFL
Trigger: TAAAAATAGTGATTTGAAAAATACCTCTCCTGAGCATGGTGGACGTGGCTCAGAGGATGAGCAGGAGAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGAATTATTTCGCAGATaGACTTTAAGTGTCCGTGAT +
Preference number: 3 (lower is better)
Translates to: SFKFACGLRFELHGHVDVELFRR*TLSVRD
Trigger: ATCACGGACACTTAAAGTCAATCTGCGAAATAATTC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR-3UTR CAA 90 bp AGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTGGACAAAATCGATGGAATAGATCATTGCAGCAAGTaGGGAAGGATCAGTATTAAC +
Preference number: 3 (lower is better)
Translates to: RGTPPQARNCLLDKIDGIDHCSK*GRISIN
Trigger: GTTAATACTGATCCTTCCCAACTTGCTGCAATGATC...TATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR TCA 72 bp AGGCGGTTTTGTCATTGGTTTGACCAAATGACTAACTaGAGGCTCAGATACTGGGGAAAGAATTCCAAATGG +
Preference number: 3 (lower is better)
Translates to: RRFCHWFDQMTN*RLRYWGKNSKW
Trigger: CCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAGTTAGTCATTTGGTCAAACCAATGACAAAACCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR TCA 72 bp GTAGCTTGTCTTTGTATCTTTGGGGTTTGTTGCTCATaGAGAAAGTGTCCTCTGTTTTGCCTTTATCAGCCG +
Preference number: 3 (lower is better)
Translates to: VACLCIFGVCCS*RKCPLFCLYQP
Trigger: CGGCTGATAAAGGCAAAACAGAGGACACTTTCTTCATGAGCAACAAACCCCAAAGATACAAAGACAAGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR-3UTR CAA 90 bp AGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTGGACAAAATCGATGGAATAAACATCATTAGGTCGTaGGGGAAGATCATATACTTC +
Preference number: 3 (lower is better)
Translates to: RGTPPQARNCLLDKIDGINIIRS*GKIIYF
Trigger: GAAGTATATGATCTTCCCCAACGACCTAATGATGTT...TATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR GCA 72 bp TTAGCATTAATAATCAGTCTAATTGGCACAGTGGCATaGGTTCGGTTTATCAATTTTAGTGGGAGGGCTTTC +
Preference number: 3 (lower is better)
Translates to: LALIISLIGTVA*VRFINFSGRAF
Trigger: GAAAGCCCTCCCACTAAAATTGATAAACCGAACGCATGCCACTGTGCCAATTAGACTGATTATTAATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 72 bp GTTTTATTTGAAAGTGCCTTGATCATTGCAGCAAGTTaGGAAGGATCAGTATTAACTGATGCCTCTGCAATG +
Preference number: 3 (lower is better)
Translates to: VLFESALIIAAS*EGSVLTDASAM
Trigger: CATTGCAGAGGCATCAGTTAATACTGATCCTTCCCAACTTGCTGCAATGATCAAGGCACTTTCAAATAAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 72 bp CTTCACAGTCTTTTAACAGACAAAGGGATGTTATTCTaGGGTTCCTCACTGATGAATAACTATCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: LHSLLTDKGMLF*GSSLMNNYQME
Trigger: CTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAACATCCCTTTGTCTGTTAAAAGACTGTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CCA 72 bp TTTCATCGTTACCAACATCTTGTAATTTGTTGTCAATaGAACATGTCTTCACATCAACTACTGCACTGTTAT +
Preference number: 3 (lower is better)
Translates to: FHRYQHLVICCQ*NMSSHQLLHCY
Trigger: ATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGACAACAAATTACAAGATGTTGGTAACGATGAAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACTCTTCGGAGGCCAGCTaGTCCAGAGGCGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: ADPEAGEPPVREEENPEDSSEAS*SRGGRA
Trigger: GGCTCGCCCGCCTCTGGATCAGCTGGCCTCCGAAGA...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp GCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGCGGGCCCGACACAGCAAGCATaGGGAAGCTTCAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: ARVGQSTALRRPADPEAGPTQQA*GSFNSS
Trigger: CGAGGAGTTGAAGCTTCCTCATGCTTGCTGTGTCGG...GCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGTCTTCGGAGGCCAGCTaGTCCAGAGGCGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTSSEAS*SRGGRA
Trigger: GGCTCGCCCGCCTCTGGATCAGCTGGCCTCCGAAGA...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACTCTTCGGAGGCCAGCTaGTCCAGAGGCGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHSSEAS*SRGGRA
Trigger: GGCTCGCCCGCCTCTGGATCAGCTGGCCTCCGAAGA...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCACCAGGAGAGCCAGCCTaGTCGGGTCCAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAPGEPA*SGPIPQ
Trigger: CTGAGGAATTGGACCCGATCAGGCTGGCTCTCCTGG...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGGGCCTGCTAGCCGAGTaGCCACATCAGCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTGLLAE*PHQRKE
Trigger: CTCCTTGCGCTGATGTGGTCACTCGGCTAGCAGGCC...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACCTAGCAGGCATCATGTaGTTGACCACAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ADPEAGEPPVREEENPEDLAGIM*LTTEGP
Trigger: AGGCCCTTCTGTGGTCAACCACATGATGCCTGCTAG...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATTGCCAGCATGGCACTaGGGCAAGGTGGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGALPAWH*GKVVLP
Trigger: TGGAAGCACCACCTTGCCTCAGTGCCATGCTGGCAA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCATAGGGAAGGCCTCCTaGGAAGCCACAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEAIGKAS*EATDCG
Trigger: GCCACAGTCTGTGGCTTCTCAGGAGGCCTTCCCTAT...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAGTGACTGTGAGGCAATaGGCTGGCCAGCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAVTVRQ*AGQHSS
Trigger: TGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCAC...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACACGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTRASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTTCTTCGGAGGCCAGCTaGTCCAGAGGCGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQASSEAS*SRGGRA
Trigger: GGCTCGCCCGCCTCTGGATCAGCTGGCCTCCGAAGA...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp GCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGCGGGCGCATTAATAAAGGCGTaGAGGGAGAACCTAGCACTA +
Preference number: 4 (lower is better)
Translates to: ARVGQSTALRRPADPEAGALIKA*RENLAL
Trigger: TAGTGCTAGGTTCTCCCTTCACGCCTTTATTAATGC...GCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCGGGTTGTGTCAAGAGTaGGTGCACAGCAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEAGLCQE*VHSSRH
Trigger: ATGCCTGCTGCTGTGCACGCACTCTTGACACAACCC...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACACTTTGGCCAAGAAATaGATCGTCTGCAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ADPEAGEPPVREEENPEDTLAKK*IVCKSL
Trigger: CAGGGACTTGCAGACGATGCATTTCTTGGCCAAAGT...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTGGCGCGACACATCCATaGTGCGGCGTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSGATHP*CGVTVR
Trigger: CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCC...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGACACTGAGGAGGGTCTaGGAAGCGATCCCGACACAG +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTTLRRV*EAIPTQ
Trigger: CTGTGTCGGGATCGCTTCCCAGACCCTCCTCAGTGT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp GCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGCGGGCTTGAGGAAGCCACTTTaGCCAAGAAATGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: ARVGQSTALRRPADPEAGLRKPL*PRNASS
Trigger: AGACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAA...GCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATGCCTCTGCAATGGCTaGAGCAATGGTGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGACLCNG*SNGADP
Trigger: AGGATCAGCACCATTGCTTCAGCCATTGCAGAGGCA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCTCCTGCTCATCCTCTaGGCCACGTCCACCATGCTC +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSLLLIL*ATSTML
Trigger: GAGCATGGTGGACGTGGCTCAGAGGATGAGCAGGAG...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCCAAAAGGAGCAGCGCTaGGAGAGGGTTGTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEAQKEQR*ERVVSR
Trigger: TCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTG...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGTTCCCAAATACCGCTaGGCAAAAGGAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: LPESSARVGQSTALRRPAVPKYR*AKGAAL
Trigger: CAGCGCTGCTCCTTTTGCTCAGCGGTATTTGGGAAC...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCTCTTCGGAGGCCAGCTaGTCCAGAGGCGGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: QRDVATMFPRSSQVACRFSSEAS*SRGGRA
Trigger: GGCTCGCCCGCCTCTGGATCAGCTGGCCTCCGAAGA...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCCCGTTCCTCCAATaGGGCTGGACTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTSPFLQ*GWTALN
Trigger: ATTCAAGGCAGTCCAGCCGCATTGGAGGAACGGGCT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGGCTGGCCAAAGCTTCTaGCTGTACGATGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTAGQSF*LYDGLS
Trigger: GCTGAGACCATCGTACAGGCAGAAGCTTTGGCCAGC...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACACACAGGGTGTGATGTaGCTGACCCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHTQGVM*LTPPDS
Trigger: GCTGTCAGGTGGGGTCAGCCACATCACACCCTGTGT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTGGTCCTGTGGTGAAGCCCTGTTaGAGAGATCTTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: RSWPCKDSVAPAGSSSGPVVKPC*RDLGPA
Trigger: TGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCAC...AGGACCAGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR TCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTATAGGGAAGGCCTCCTaGGAAGCCACAGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSIGKAS*EATDCG
Trigger: GCCACAGTCTGTGGCTTCTCAGGAGGCCTTCCCTAT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGTGTGTCAAGAGTGCGTaGACAGCAGCAGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTCVKSA*TAAGMF
Trigger: GAACATGCCTGCTGCTGTGCACGCACTCTTGACACA...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACCCCAATGCTGACTTaGAGCCAGCGGTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSTPMLT*SQRSVG
Trigger: TCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGT...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAGATCCTAGCTATTCCTaGTCTTGCTCGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGADPSYS*SCSETH
Trigger: GTGAGTCTCCGAGCAAGAGCAGGAATAGCTAGGATC...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGCGGGCATGGCAATGACTGTGTaGATTAATAAAGGCGTGAAG +
Preference number: 4 (lower is better)
Translates to: ARVGQSTALRRPADPEAGMAMTV*INKGVK
Trigger: CTTCACGCCTTTATTAATGCACACAGTCATTGCCAT...GCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACAATAATCAGTCTAATTaGCACAGTGGCATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: ADPEAGEPPVREEENPEDNNQSN*HSGMRS
Trigger: CGAACGCATGCCACTGTGCCAATTAGACTGATTATT...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTCTAGCAGGCATCATGTaGTTGACCACAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPESSARVGQSTALRRPALAGIM*LTTEGP
Trigger: AGGCCCTTCTGTGGTCAACCACATGATGCCTGCTAG...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGCCTGTACACATCCTCTaGGGCATAAACTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTPVHIL*GINSTS
Trigger: GCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGG...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGTACTCAACTCGCTGGTaGTATCACTCTTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTYSTRW*YHSCGP
Trigger: AGGACCGCAAGAGTGATATCACCAGCGAGTTGAGTA...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGTGGCTGACCCCACCTaGCAGCTCAGACCTGACTTG +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAVADPT*QLRPDL
Trigger: CAAGTCAGGTCTGAGCTGTCAGGTGGGGTCAGCCAC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGACGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGRASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGCGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRRASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAAGCTATTCCTGCTCTTaGTCGGAGACTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGASYSCS*SETHTS
Trigger: AGAAGTGTGAGTCTCCGAGCAAGAGCAGGAATAGCT...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGTGCTTTAACAAAAGCTaGTCGGGAGCCAGTGTTGCG +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTCFNKS*SGASVA
Trigger: CGCAACACTGGCTCCCGAGCAGCTTTTGTTAAAGCA...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGCGACACATCCATGCTaGGGCGTGACTGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSATHPC*GVTVRQ
Trigger: TTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGC...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTTATGTAACAGGGCCCTaGCTGCGATACTGCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LPESSARVGQSTALRRPAYVTGP*LRYCCL
Trigger: AAGACAGCAGTATCGCAGGCAGGGCCCTGTTACATA...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000430049.6
CDS-3UTR CCA 90 bp CTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTGGCTGGCTCCTCTTCTaGTCCTGCTGTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: LLKRSWPCKDSVAPAGSSGWLLF*SCCLHL
Trigger: CAAATGGAGACAGCAGGACCAGAAGAGGAGCCAGCC...AGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACCAGCCAGCGGTCAGTTaGATTAAGCACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHQPAVS*IKHTEE
Trigger: CTCCTCAGTGTGCTTAATCCAACTGACCGCTGGCTG...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCCTGTACACATCCTCTaGGGCATAAACTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSPVHIL*GINSTS
Trigger: GCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATTTTCGATGGACTCGTaGCATTCACATGTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAFSMDS*HSHVRL
Trigger: AAGGCGAACATGTGAATGTCACGAGTCCATCGAAAA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGGGGTTTGTTGCTCATaGAGAAAGTGTCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: SSARVGQSTALRRPADPEGVCCS*RKCPLF
Trigger: AAACAGAGGACACTTTCTTCATGAGCAACAAACCCC...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACTACTCAACTCGCTGGTaGTATCACTCTTGCGGTCCT +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHYSTRW*YHSCGP
Trigger: AGGACCGCAAGAGTGATATCACCAGCGAGTTGAGTA...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGGCCTGCTAGCCGAGTaGCCACATCAGCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVGLLAE*PHQRKE
Trigger: CTCCTTGCGCTGATGTGGTCACTCGGCTAGCAGGCC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSARVGQSTALRRPADPENPEDL*LVKHPK
Trigger: CTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTT...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGANPEDL*LVKHPK
Trigger: CTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTT...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACCGGGGCTTAACTAAATaGTCTATTTTAATGAGGGAA +
Preference number: 4 (lower is better)
Translates to: ADPEAGEPPVREEENPEDRGLTK*SILMRE
Trigger: TTCCCTCATTAAAATAGATCATTTAGTTAAGCCCCG...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTACTGCACGGGCATGTTaGTGTAATGCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSTARAC*CNAGLS
Trigger: TGAGAGCCCAGCATTACATCAACATGCCCGTGCAGT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTGGAAGAGATCTTGGCCCTaGAAGGATTCTGTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: EEILALQGFCSSGWLLFWKRSWP*KDSVAP
Trigger: CGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTT...CCAGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR GCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAAAGGGAGACAACTCCTaGTCACAGGGAGGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTKGDNS*SQGGCC
Trigger: GCAGCAGCCTCCCTGTGAGCAGGAGTTGTCTCCCTT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGACACATACGTCAGCCTaGTCACCCCAGCAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRTHTSA*SPQQAS
Trigger: GCTCGCCTGCTGGGGTGAGCAGGCTGACGTATGTGT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCTATTCCTGCTCTTaGTCGGAGACTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTSYSCS*SETHTS
Trigger: AGAAGTGTGAGTCTCCGAGCAAGAGCAGGAATAGCT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTACTTTGGCCAAGAAATaGATCGTCTGCAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LPESSARVGQSTALRRPATLAKK*IVCKSL
Trigger: CAGGGACTTGCAGACGATGCATTTCTTGGCCAAAGT...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAGAAACGTCCAGTTTTTaGCATGTCACAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAETSSF*HVTRRR
Trigger: CCTTCTCCTTGTGACATGGCAAAAACTGGACGTTTC...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGGCGCGACACATCCATaGTGCGGCGTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVGATHP*CGVTVR
Trigger: CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGGCGCGACACATCCATaGTGCGGCGTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVGATHP*CGVTVR
Trigger: CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATGCTGTGTTTTCTTCTaGTGCCCTCACACTTACACT +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGACCVFF*CPHTYT
Trigger: AGTGTAAGTGTGAGGGCACCAGAAGAAAACACAGCA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACACATCATTAGGTCGTTaGGGAAGATCATATACTTCA +
Preference number: 4 (lower is better)
Translates to: ADPEAGEPPVREEENPEDTSLGR*GRSYTS
Trigger: TGAAGTATATGATCTTCCCCAACGACCTAATGATGT...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR CCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCCTGTACACATCCTCTaGGGCATAAACTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSPVHIL*GINSTS
Trigger: GCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGG...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp CTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTGCTTGTTCCAGTGGTaGAGCCCTGTTGAAGAGATC +
Preference number: 4 (lower is better)
Translates to: LLKRSWPCKDSVAPAGSSCLFQW*SPVEEI
Trigger: GATCTCTTCAACAGGGCTTCACCACTGGAACAAGCA...AGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR TCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTAATAGGCAAGGTCTGTaGCCCACCTACCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSNRQGL*PTYPLH
Trigger: ATGAAGAGGGTAGGTGGGTCACAGACCTTGCCTATT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGACTGGTAAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCCTCCTGCTCATCCTCTaGGCCACGTCCACCATGCTC +
Preference number: 4 (lower is better)
Translates to: LTGKTSKETLPPCFPEAPLLLIL*ATSTML
Trigger: GAGCATGGTGGACGTGGCTCAGAGGATGAGCAGGAG...GGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGACTGGTAAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCCCAGGAGAGCCAGCCTaGTCGGGTCCAATTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LTGKTSKETLPPCFPEAPPGEPA*SGPIPQ
Trigger: CTGAGGAATTGGACCCGATCAGGCTGGCTCTCCTGG...GGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGTTCCCAAATACCGCTaGGCAAAAGGAGCAGCGCTG +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAVPKYR*AKGAAL
Trigger: CAGCGCTGCTCCTTTTGCTCAGCGGTATTTGGGAAC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGGCCTGCTAGCCGAGTaGCCACATCAGCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGGLLAE*PHQRKE
Trigger: CTCCTTGCGCTGATGTGGTCACTCGGCTAGCAGGCC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACAGAAGAGGAGAACCCTaGGGACCTTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHRRGEP*GPLTGK
Trigger: TTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp ACAGGACTCTCGGCAATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTGCCCTCTGGGCAAAAATGTaGTGGAGACTTTTTGGATCC +
Preference number: 4 (lower is better)
Translates to: TGLSAMAVRVTVLAKASALWAKM*WRLFGS
Trigger: GGATCCAAAAAGTCTCCATCACATTTTTGCCCAGAG...GGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGCCGAGAGTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CTGTACGATGGTCTCAGCATCTGTCGAACATGGCCAAGAAGCAACACTGAATGTGCGAGCAGAAGCCTCTaGCACAGCTTGTCTTCGGGG +
Preference number: 4 (lower is better)
Translates to: LYDGLSICRTWPRSNTECASRSL*HSLSSG
Trigger: CCCCGAAGACAAGCTGTGTCAGAGGCTTCTGCTCGC...ACATTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAAGTACTTGGAATGTTTaGCATAGAATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGASTWNV*HRMALW
Trigger: CCAGAGAGCCATTCTATGTCAAACATTCCAAGTACT...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGGTCTGAAGCTCTCCTaGTCATCCTCTGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAGLKLS*SSSEPR
Trigger: ACGTGGCTCAGAGGATGAGCAGGAGAGCTTCAGACC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAACACATACGTCAGCCTaGTCACCCCAGCAGGCGAGC +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVTHTSA*SPQQAS
Trigger: GCTCGCCTGCTGGGGTGAGCAGGCTGACGTATGTGT...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACACTTTGGCCAAGAAATaGATCGTCTGCAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHTLAKK*IVCKSL
Trigger: CAGGGACTTGCAGACGATGCATTTCTTGGCCAAAGT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGGCTAAAGATGACAGATaGCATTTCACGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTAKDDR*HFTSVV
Trigger: CACCACAGACGTGAAATGGCATCTGTCATCTTTAGC...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TCTGGCTTCCGGGAGATGACCCGGATGGAACTGAAAATCTCCCTTCTACTAAGTGGTTCAGCATCACTCTaGCTTCCGGGAGATGACCCG +
Preference number: 4 (lower is better)
Translates to: SGFREMTRMELKISLLLSGSASL*LPGDDP
Trigger: CGGGTCATCTCCCGGAAGCCAGAGTGATGCTGAACC...ACTTAGTAGAAGGGAGATTTTCAGTTCCATCCGGGTCATCTCCCGGAAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR CCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCAGGATAGGAGCTCTCTaGTTCAGACACATACGTCAG +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSRIGAL*FRHIRQ
Trigger: CTGACGTATGTGTCTGAACCAGAGAGCTCCTATCCT...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCTTCTGCCTGTACGATaGTCTCAGCATCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSLLPVR*SQHLSN
Trigger: GTTCGACAGATGCTGAGACCATCGTACAGGCAGAAG...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAAATAATCAGTCTAATTaGCACAGTGGCATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGANNQSN*HSGMRS
Trigger: CGAACGCATGCCACTGTGCCAATTAGACTGATTATT...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp ACAGGACTCTCGGCAATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTGCCTTGAGGAAGCCACTTTaGCCAAGAAATGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: TGLSAMAVRVTVLAKASALRKPL*PRNASS
Trigger: AGACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAA...GGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGCCGAGAGTCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCACATAGAATGGCTCTCTaGGACTCAAAAACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAHRMAL*DSKTSV
Trigger: CACTGAAGTTTTTGAGTCCCAGAGAGCCATTCTATG...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCGGTCAATCGCTGTTCTaGACCAAAAGTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSGQSLF*TKSVLK
Trigger: CTTCAGAACACTTTTGGTTCAGAACAGCGATTGACC...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACCCTTTGGGTGAATTCTaGTCTCACAGTTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHPLGEF*SHSYWS
Trigger: TGACCAGTAACTGTGAGATCAGAATTCACCCAAAGG...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: EGATRIKCSGRTVHGSSENPEDL*LVKHPK
Trigger: CTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTT...CTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCATTGGTTTGACCAAATaGCTAACTGAAGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEAIGLTK*LTEGSD
Trigger: ATCTGAGCCTTCAGTTAGTCATTTGGTCAAACCAAT...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCTTTCATCAACTCCCTTaGCATAAGGTGGCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSFHQLP*HKVALK
Trigger: CTTTAGCGCCACCTTATGTCAAGGGAGTTGATGAAA...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGGGTGGGAAGATTGCTTaGGGTCAGGAGATCGAGACC +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRGGKIA*GQEIET
Trigger: GGTCTCGATCTCCTGACCTCAAGCAATCTTCCCACC...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR GCA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGAGCCCGTTCCTCCAATaGGGCTGGACTGCCTTGAAT +
Preference number: 4 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLSPFLQ*GWTALN
Trigger: ATTCAAGGCAGTCCAGCCGCATTGGAGGAACGGGCT...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTACTTTGGCCAAGAAATaGATCGTCTGCAAGTCCCTG +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSTLAKK*IVCKSL
Trigger: CAGGGACTTGCAGACGATGCATTTCTTGGCCAAAGT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGTGCTTTAACAAAAGCTaGTCGGGAGCCAGTGTTGCG +
Preference number: 4 (lower is better)
Translates to: ICSLLSGATHPCCGVTVRCFNKS*SGASVA
Trigger: CGCAACACTGGCTCCCGAGCAGCTTTTGTTAAAGCA...CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp CAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTCATCCAAAGAGACGTTaGCACCATGTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QGEGATRIKCSGRTVHGSHPKRR*HHVSQK
Trigger: CTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATG...AGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR GCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAATRIK*SGRTVH
Trigger: GTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGGTGACTGTGAGGCAATaGGCTGGCCAGCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMVTVRQ*AGQHSS
Trigger: TGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCAC...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGGCGACACATCCATGCTaGGGCGTGACTGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMATHPC*GVTVRQ
Trigger: TTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGC...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGCGACACATCCATGCTaGGGCGTGACTGTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLATHPC*GVTVRQ
Trigger: TTGCCTCACAGTCACGCCGCAGCATGGATGTGTCGC...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGATCCGTGGAAAGGCATaGGTTTTCAGGCTCATTTTC +
Preference number: 4 (lower is better)
Translates to: EGATRIKCSGRTVHGSSEIRGKA*VFRLIF
Trigger: GAAAATGAGCCTGAAAACGCATGCCTTTCCACGGAT...CTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHSFKFA*GLRFEL
Trigger: CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGGGCTGGCTCCTCTTCTaGTCCTGCTGTCTCCATTTG +
Preference number: 4 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLGWLLF*SCCLHL
Trigger: CAAATGGAGACAGCAGGACCAGAAGAGGAGCCAGCC...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGAAAGGGATGTTATTCTaGGGTTCCTCACTGATGAAT +
Preference number: 4 (lower is better)
Translates to: SSARVGQSTALRRPADPEKGMLF*GSSLMN
Trigger: ATTCATCAGTGAGGAACCCCAGAATAACATCCCTTT...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAACACAGGGTGTGATGTaGCTGACCCCACCTGACAGC +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVTQGVM*LTPPDS
Trigger: GCTGTCAGGTGGGGTCAGCCACATCACACCCTGTGT...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp CAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTGCCATTTCACGTCTGTaGTGCCATGATTCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: QGEGATRIKCSGRTVHGSAISRL*CHDSRV
Trigger: AACTCGAGAATCATGGCACCACAGACGTGAAATGGC...AGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGATTTTCATCCACTTGTaGAGTACTCTCTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTIFIHL*STLYCF
Trigger: GAAGCAGTAGAGAGTACTTCACAAGTGGATGAAAAT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGGTCTCTGGTTTTATTTaGAAGTGCCTTGATCATTGC +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTVSGFI*KCLDHC
Trigger: GCAATGATCAAGGCACTTTCAAATAAAACCAGAGAC...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCAGAATATCTGAAGAGCTaGTCTGTTTCTTTGGACTAT +
Preference number: 4 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAEYLKS*SVSLDY
Trigger: ATAGTCCAAAGAAACAGATCAGCTCTTCAGATATTC...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCCTTGTTCTGGGACCTTaGTATCCAAATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEALVLGP*YPNKLQ
Trigger: TTGAAGTTTATTTGGATATCAAGGTCCCAGAACAAG...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCAGTCGTAAATGTTaGGTTGTAGATGCAGAATTA +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEASSRKC*VVDAEL
Trigger: TAATTCTGCATCTACAACTCAACATTTACGACTGCT...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACGCGATACTGCTGTCTTaGAATTTCATCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHAILLS*NFISTK
Trigger: TTTGGTGGAGATGAAATTTCAAGACAGCAGTATCGC...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACCGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: RRLKEFSARNAISEFSNYRASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAACGTCTGTGGTGCCATaGTTCTCGAGTTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTTSVVP*FSSSRQ
Trigger: CTGTCTAGAACTCGAGAATCATGGCACCACAGACGT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCACTGCACGGGCATGTTaGTGTAATGCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: QRDVATMFPRSSQVACRFTARAC*CNAGLS
Trigger: TGAGAGCCCAGCATTACATCAACATGCCCGTGCAGT...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCGAGGTCCCACAGCCCTaGCTCCGCCTCGACTGCAGT +
Preference number: 4 (lower is better)
Translates to: EASTNTDSQVTVVKLGHFEVPQP*LRLDCS
Trigger: ACTGCAGTCGAGGCGGAGTCAGGGCTGTGGGACCTC...GAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGAGCCACGTCCACCATaGTCAGGAGAGGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAEPRPP*SGEVFF
Trigger: GAAAAATACCTCTCCTGAGCATGGTGGACGTGGCTC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGCTGGCCAAAGCTTCTaGCTGTACGATGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLAGQSF*LYDGLS
Trigger: GCTGAGACCATCGTACAGGCAGAAGCTTTGGCCAGC...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTGTACGATGGTCTCAGCATCTGTCGAACATGGCCAAGAAGCAACACTGAATGTGCTGGCCAAAGCTTCTaGCTGTACGATGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LYDGLSICRTWPRSNTECAGQSF*LYDGLS
Trigger: GCTGAGACCATCGTACAGGCAGAAGCTTTGGCCAGC...ACATTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAGATCCTAGCTATTCCTaGTCTTGCTCGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTDPSYS*SCSETH
Trigger: GTGAGTCTCCGAGCAAGAGCAGGAATAGCTAGGATC...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTAGGGCCCTGCGATACTaGTGTCTTGAAATTTCATCT +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSRALRY*CLEISS
Trigger: AGATGAAATTTCAAGACAGCAGTATCGCAGGGCCCT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTAGGGCCCTGCGATACTaGTGTCTTGAAATTTCATCT +
Preference number: 4 (lower is better)
Translates to: QGEGATRIKCSGRTVHGSRALRY*CLEISS
Trigger: AGATGAAATTTCAAGACAGCAGTATCGCAGGGCCCT...AGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRATRIK*SGRTVH
Trigger: GTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGC...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGTGACTGTGAGGCAATaGGCTGGCCAGCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRVTVRQ*AGQHSS
Trigger: TGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCAC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp CTGTTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTCTGTTGAAGAGATCTTaGCCCTGCAAGGATTCTGTA +
Preference number: 4 (lower is better)
Translates to: LLKRSWPCKDSVAPAGSSLLKRS*PCKDSV
Trigger: TACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAG...AGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR CCA 90 bp GGCACGAGGGAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGACACTGAGGAGGGTCTaGGAAGCGATCCCGACACAG +
Preference number: 4 (lower is better)
Translates to: GTREASTNTDSQVTVVKLTLRRV*EAIPTQ
Trigger: CTGTGTCGGGATCGCTTCCCAGACCCTCCTCAGTGT...CAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACAATAATCAGTCTAATTaGCACAGTGGCATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHNNQSN*HSGMRS
Trigger: CGAACGCATGCCACTGTGCCAATTAGACTGATTATT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGCTAGCAGGCATCATGTaGTTGACCACAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRLAGIM*LTTEGP
Trigger: AGGCCCTTCTGTGGTCAACCACATGATGCCTGCTAG...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGTGACTTCCTTGTTCTaGGACCTTGATATCCAAATA +
Preference number: 4 (lower is better)
Translates to: LPESSARVGQSTALRRPAVTSLF*DLDIQI
Trigger: TATTTGGATATCAAGGTCCCAGAACAAGGAAGTCAC...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp CAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTACTTTTTGGATCCCATaGCTTTCCAGCAGACCAGAA +
Preference number: 4 (lower is better)
Translates to: QGEGATRIKCSGRTVHGSTFWIP*LSSRPE
Trigger: TTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAAGT...AGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCATAGAATGGCTCTCTaGGACTCAAAAACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSHRMAL*DSKTSV
Trigger: CACTGAAGTTTTTGAGTCCCAGAGAGCCATTCTATG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTCAAGCTGCCTGTTTTTaGATCCCATGGCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAQAACF*IPWLSS
Trigger: GCTGGAAAGCCATGGGATCCAAAAACAGGCAGCTTG...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000510237.5
CDS-3UTR TCA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAAACTGTCTTATTTTGGTaGGGACACTCTGCCCCCTGT +
Preference number: 4 (lower is better)
Translates to: RRWPLRGTREASTNTDSQTVLFW*GHSAPC
Trigger: ACAGGGGGCAGAGTGTCCTCACCAAAATAAGACAGT...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCAATAGGCAAGGTCTGTaGCCCACCTACCCTCTTCAT +
Preference number: 4 (lower is better)
Translates to: QRDVATMFPRSSQVACRFNRQGL*PTYPLH
Trigger: ATGAAGAGGGTAGGTGGGTCACAGACCTTGCCTATT...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTTCACTAGGAGAAGAATaGCTCAGTGGTGACGTGGAA +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQASLGEE*LSGDVE
Trigger: TTCCACGTCACCACTGAGTCATTCTTCTCCTAGTGA...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGGCGGCTGGACTGCCTTaGATAATTGTGGTACTCAAC +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRAAGLP*IIVVLN
Trigger: GTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGC...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACACAAAAGGAGCAGCGCTaGGAGAGGGTTGTGTCAAGA +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTQKEQR*ERVVSR
Trigger: TCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTG...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGACCGACACAGCAAGCATaGGGAAGCTTCAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGPTQQA*GSFNSS
Trigger: CGAGGAGTTGAAGCTTCCTCATGCTTGCTGTGTCGG...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTATTCCTTGGAAAACGTaGAACAGCGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: NIQRDVATMFPRSSQVACIPWKT*NSARLQ
Trigger: CTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAAT...ACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGATTCCTTGGAAAACGTaGAACAGCGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRIPWKT*NSARLQ
Trigger: CTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAAT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCTTAAAGCTAGTTTCTaGAGCTGTGTTCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSLKASF*SCVLPR
Trigger: TCTAGGTAGAACACAGCTTCAGAAACTAGCTTTAAG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACCTTAATGCCTGGTTGTaGTCGATTTCCAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHLNAWL*SISKLF
Trigger: AAACAACTTGGAAATCGATCACAACCAGGCATTAAG...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TATAATTTTACACATGCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGCGGGCGAGCCGCCCGTaGGAGAAGAGGAGAACCCTG +
Preference number: 4 (lower is better)
Translates to: YNFTHASIKELNIIRSLGRASRP*EKRRTL
Trigger: CAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCG...CCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGCATGTGTAAAATTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGG +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTDFKCP*FPHTSR
Trigger: CCGACTAGTGTGGGGGAATCACGGACACTTAAAGTC...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000510237.5
CDS-3UTR TCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGG +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVDFKCP*FPHTSR
Trigger: CCGACTAGTGTGGGGGAATCACGGACACTTAAAGTC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAACTGCACGGGCATGTTaGTGTAATGCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVTARAC*CNAGLS
Trigger: TGAGAGCCCAGCATTACATCAACATGCCCGTGCAGT...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACCCGCCTCGACTGCAGTaGCAACTCCAGCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: RRLKEFSARNAISEFSNYPPRLQ*QLQPPS
Trigger: GGAGGGTGGCTGGAGTTGTCACTGCAGTCGAGGCGG...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCCAGAACATCTTTACTTaGACATTCACTGTTAAGATC +
Preference number: 4 (lower is better)
Translates to: GATRIKCSGRTVHGSSEAQNIFT*TFTVKI
Trigger: GATCTTAACAGTGAATGTGCAAGTAAAGATGTTCTG...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp CAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTGTGTTTTCTTCTGGTaGCCTCACACTTACACTAGT +
Preference number: 4 (lower is better)
Translates to: QGEGATRIKCSGRTVHGSCVFFW*PHTYTS
Trigger: ACTAGTGTAAGTGTGAGGGCACCAGAAGAAAACACA...AGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGTGTGTCAAGAGTGCGTaGACAGCAGCAGGCATGTTC +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMCVKSA*TAAGMF
Trigger: GAACATGCCTGCTGCTGTGCACGCACTCTTGACACA...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGGGTTGTGTCAAGAGTaGGTGCACAGCAGCAGGCAT +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRGLCQE*VHSSRH
Trigger: ATGCCTGCTGCTGTGCACGCACTCTTGACACAACCC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp GGCACGAGGGAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGACCCCAATGCTGACTTaGAGCCAGCGGTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: GTREASTNTDSQVTVVKLTPMLT*SQRSVG
Trigger: TCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGT...CAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR GCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGCTGGCCAAAGCTTCTaGCTGTACGATGGTCTCAGC +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGAGQSF*LYDGLS
Trigger: GCTGAGACCATCGTACAGGCAGAAGCTTTGGCCAGC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCTGCTTTAACAAAAGCTaGTCGGGAGCCAGTGTTGCG +
Preference number: 4 (lower is better)
Translates to: QRDVATMFPRSSQVACRFCFNKS*SGASVA
Trigger: CGCAACACTGGCTCCCGAGCAGCTTTTGTTAAAGCA...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGATCCTTAAAACCTACTaGTTTAACAAAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTILKTY*FNKSCS
Trigger: CGAGCAGCTTTTGTTAAAGCAGTAGGTTTTAAGGAT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AGCTCCCAAGTCGCTTGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAAGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSQVACRFQASFGRRLKEATRIK*SGRTVH
Trigger: GTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGC...TTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACAAGCGACTTGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR CCA 90 bp GAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGATAGACCACACTCTGTaGGAGATCTGTTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: EGATRIKCSGRTVHGSSEIDHTL*EICFVF
Trigger: AAAGACAAAACAGATCTCCCACAGAGTGTGGTCTAT...CTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp ACAGGACTCTCGGCAATGGCAGTGAGAGTGACGGTGCTGGCCAAAGCTTCTGCCTTGTCTTTGTATCTTTaGGGTTTGTTGCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: TGLSAMAVRVTVLAKASALSLYL*GLLLMK
Trigger: CTTCATGAGCAACAAACCCCAAAGATACAAAGACAA...GGCAGAAGCTTTGGCCAGCACCGTCACTCTCACTGCCATTGCCGAGAGTCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp GTTTTTGCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGAAGTCCCTGGGAGCATaGATCCTAGCTATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: VFAMSQGEGATRIKCSGRKSLGA*ILAIPA
Trigger: AGCAGGAATAGCTAGGATCCATGCTCCCAGGGACTT...CCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGCAAAAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAAAAGTCCCTGGGAGCATaGATCCTAGCTATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RRWPLRGTREASTNTDSQKSLGA*ILAIPA
Trigger: AGCAGGAATAGCTAGGATCCATGCTCCCAGGGACTT...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACGTGACTTCCTTGTTCTaGGACCTTGATATCCAAATA +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHVTSLF*DLDIQI
Trigger: TATTTGGATATCAAGGTCCCAGAACAAGGAAGTCAC...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGACATCATTAGGTCGTTaGGGAAGATCATATACTTCA +
Preference number: 4 (lower is better)
Translates to: PHTSRPEPVHILWGINSTTSLGR*GRSYTS
Trigger: TGAAGTATATGATCTTCCCCAACGACCTAATGATGT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACATGTGAGGCAATGCGCTaGCCAGCACAGCTCAAATCT +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTCEAMR*PAQLKS
Trigger: AGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACA...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000510237.5
CDS-3UTR CCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGTGTGAGGCAATGCGCTaGCCAGCACAGCTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLCEAMR*PAQLKS
Trigger: AGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACA...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCGGAAAGAATTCCAAATaGTTTGGAGGTCAAACGAGT +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSGKNSK*FGGQTS
Trigger: ACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCC...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACAGGCGGTTTTGTCATTaGTTTGACCAAATGACTAAC +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHRRFCH*FDQMTN
Trigger: GTTAGTCATTTGGTCAAACCAATGACAAAACCGCCT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGCCTCCTCACTGTCAATaGGGATCTTCTTTTCTACTC +
Preference number: 4 (lower is better)
Translates to: ICSLLSGATHPCCGVTVRPPHCQ*GSSFLL
Trigger: GAGTAGAAAAGAAGATCCCCATTGACAGTGAGGAGG...CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
3UTR CAA 72 bp TTCCATAGCCCGTTCCTCCAATGCGGCTGGACTGCCTaGAATAATTGTGGTACTCAACTCGCTGGTGATATC +
Preference number: 4 (lower is better)
Translates to: FHSPFLQCGWTA*NNCGTQLAGDI
Trigger: GATATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAGGAACGGGCTATGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTTTTGCTGAGAGCATTTaGCAAACGTTGACTTTCCAC +
Preference number: 4 (lower is better)
Translates to: LKRSWPCKDSVAPAGSSSFAESI*QTLTFH
Trigger: GTGGAAAGTCAACGTTTGTCAAATGCTCTCAGCAAA...AGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR TCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGGGGTTTGTTGCTCATaGAGAAAGTGTCCTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAGVCCS*RKCPLF
Trigger: AAACAGAGGACACTTTCTTCATGAGCAACAAACCCC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGGTGGTGCTTCCAGTTaGAGGGAGTGTTCCCAAATA +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVGGASS*RECSQI
Trigger: TATTTGGGAACACTCCCTTCAACTGGAAGCACCACC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATTCCTTGGAAAACGTaGAACAGCGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVIPWKT*NSARLQ
Trigger: CTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAAT...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCTTAAAGCTAGTTTCTaGAGCTGTGTTCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSLKASF*SCVLPR
Trigger: TCTAGGTAGAACACAGCTTCAGAAACTAGCTTTAAG...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGCGATACTGCTGTCTTaGAATTTCATCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSAILLS*NFISTK
Trigger: TTTGGTGGAGATGAAATTTCAAGACAGCAGTATCGC...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGG +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGDFKCP*FPHTSR
Trigger: CCGACTAGTGTGGGGGAATCACGGACACTTAAAGTC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAACTGCACGGGCATGTTaGTGTAATGCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGTARAC*CNAGLS
Trigger: TGAGAGCCCAGCATTACATCAACATGCCCGTGCAGT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTTCCAAGCAAGCACATTaGCCCTTACACTCACTTGTC +
Preference number: 4 (lower is better)
Translates to: NIQRDVATMFPRSSQVACSKQAH*PLHSLV
Trigger: GACAAGTGAGTGTAAGGGTCAATGTGCTTGCTTGGA...ACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp CTGAAGGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTGGTGAGGACACTCTaGCCCCTGTTTTACAGGGTC +
Preference number: 4 (lower is better)
Translates to: LKAQILGKEFQMVWRSNELVRTL*PLFYRV
Trigger: GACCCTGTAAAACAGGGGGCAGAGTGTCCTCACCAA...CTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAGAGCCACGTCCACCATaGTCAGGAGAGGTATTTTTC +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTEPRPP*SGEVFF
Trigger: GAAAAATACCTCTCCTGAGCATGGTGGACGTGGCTC...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR GCA 90 bp CCCAGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTGGTCTGAAGCTCTCCTaGTCATCCTCTGAGCCACGT +
Preference number: 4 (lower is better)
Translates to: PRTGWYKKHFYLFCGMRSGLKLS*SSSEPR
Trigger: ACGTGGCTCAGAGGATGAGCAGGAGAGCTTCAGACC...AGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCAGCTATTCCTGCTCTTaGTCGGAGACTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFSYSCS*SETHTS
Trigger: AGAAGTGTGAGTCTCCGAGCAAGAGCAGGAATAGCT...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TGCGGCGTGACTGTGAGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACATCCTTAAAACCTACTaGTTTAACAAAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: CGVTVRQCAGQHSSNLSNILKTY*FNKSCS
Trigger: CGAGCAGCTTTTGTTAAAGCAGTAGGTTTTAAGGAT...GTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCACGCCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCATCCTTAAAACCTACTaGTTTAACAAAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSILKTY*FNKSCS
Trigger: CGAGCAGCTTTTGTTAAAGCAGTAGGTTTTAAGGAT...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRATRIK*SGRTVH
Trigger: GTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACGGCGCGACACATCCATaGTGCGGCGTGACTGTGAGG +
Preference number: 4 (lower is better)
Translates to: RRLKEFSARNAISEFSNYGATHP*CGVTVR
Trigger: CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCC...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAGCTAAAGATGACAGATaGCATTTCACGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTAKDDR*HFTSVV
Trigger: CACCACAGACGTGAAATGGCATCTGTCATCTTTAGC...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTAGGAGAACATCTGAATaGTGCATAGGTAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSRRTSE*CIGSSK
Trigger: TTTAGAGCTACCTATGCAGCATTCAGATGTTCTCCT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTSFKFA*GLRFEL
Trigger: CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGGCAGTCACATCAAGCTaGCTGTTTTTGGATCCCATG +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRAVTSS*LFLDPM
Trigger: CATGGGATCCAAAAACAGGCAGCTTGATGTGACTGC...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCATCATTGCAGCAAGTTaGGAAGGATCAGTATTAACT +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSIIAAS*EGSVLT
Trigger: AGTTAATACTGATCCTTCCCAACTTGCTGCAATGAT...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCATTGCAGCAAGTTaGGAAGGATCAGTATTAACT +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHIIAAS*EGSVLT
Trigger: AGTTAATACTGATCCTTCCCAACTTGCTGCAATGAT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATGCTGTGTTTTCTTCTaGTGCCCTCACACTTACACT +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTCCVFF*CPHTYT
Trigger: AGTGTAAGTGTGAGGGCACCAGAAGAAAACACAGCA...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGCTTCTGCCTGTACGATaGTCTCAGCATCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMLLPVR*SQHLSN
Trigger: GTTCGACAGATGCTGAGACCATCGTACAGGCAGAAG...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGCTAGCAGGCATCATGTaGTTGACCACAGAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRLAGIM*LTTEGP
Trigger: AGGCCCTTCTGTGGTCAACCACATGATGCCTGCTAG...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGAAGTCCCTGGGAGCATaGATCCTAGCTATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMKSLGA*ILAIPA
Trigger: AGCAGGAATAGCTAGGATCCATGCTCCCAGGGACTT...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTGAGTTATTCACAATCTaGAAACGTCCAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSELFTI*KRPVFA
Trigger: GGCAAAAACTGGACGTTTCCAGATTGTGAATAACTC...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTAGGCGGTTTTGTCATTaGTTTGACCAAATGACTAAC +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSRRFCH*FDQMTN
Trigger: GTTAGTCATTTGGTCAAACCAATGACAAAACCGCCT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTCAAGCTGCCTGTTTTTaGATCCCATGGCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KTSKETLPPCFPEAPKSLQAACF*IPWLSS
Trigger: GCTGGAAAGCCATGGGATCCAAAAACAGGCAGCTTG...AAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000430049.6
CDS-3UTR CCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCAAGCTGCCTGTTTTTaGATCCCATGGCTTTCCAGC +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMQAACF*IPWLSS
Trigger: GCTGGAAAGCCATGGGATCCAAAAACAGGCAGCTTG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000589993.5
3UTR CAA 72 bp AAGGCTGTCTCCCCAGTCCACCTCCAAGCAAGCACATaGACCCTTACACTCACTTGTCTTAAAAAGGACACT +
Preference number: 4 (lower is better)
Translates to: KAVSPVHLQAST*TLTLTCLKKDT
Trigger: AGTGTCCTTTTTAAGACAAGTGAGTGTAAGGGTCAATGTGCTTGCTTGGAGGTGGACTGGGGAGACAGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACGTGGCTGACCCCACCTaGCAGCTCAGACCTGACTTG +
Preference number: 4 (lower is better)
Translates to: RRLKEFSARNAISEFSNYVADPT*QLRPDL
Trigger: CAAGTCAGGTCTGAGCTGTCAGGTGGGGTCAGCCAC...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCCTCACGGCCAGCAGTTaGCTTATCTTTAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: QRDVATMFPRSSQVACRFLTASS*LIFRTY
Trigger: ATAAGTCCTAAAGATAAGTCAACTGCTGGCCGTGAG...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTATTCTGGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTGAGGTTGCCAGCATGGCACTaGGGCAAGGTGGTGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LFWGSSLMNNYQMEWKLRLPAWH*GKVVLP
Trigger: TGGAAGCACCACCTTGCCTCAGTGCCATGCTGGCAA...CCTCAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTATTTGTGGCCTGCTAGCCGAGTaGCCACATCAGCGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: VNGTCLHINYCTVILSICGLLAE*PHQRKE
Trigger: CTCCTTGCGCTGATGTGGTCACTCGGCTAGCAGGCC...ACAAATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCCCTTTGGGTGAATTCTaGTCTCACAGTTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFPLGEF*SHSYWS
Trigger: TGACCAGTAACTGTGAGATCAGAATTCACCCAAAGG...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCGCTTTGGAAGAAGGCTaGAGGAATTCTCTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFALEEG*RNSLLE
Trigger: TTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGC...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGAGAAGAGGAGAACCCTaGGGACCTTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLRRGEP*GPLTGK
Trigger: TTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCT...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGCTCCCAAGTCGCTTGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAAAGAAGAGGAGAACCCTaGGGACCTTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: SSQVACRFQASFGRRLKERRGEP*GPLTGK
Trigger: TTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCT...TTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACAAGCGACTTGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGAGAAGAGGAGAACCCTaGGGACCTTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMRRGEP*GPLTGK
Trigger: TTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCT...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGATTGGTTTGACCAAATaGCTAACTGAAGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ICSLLSGATHPCCGVTVRIGLTK*LTEGSD
Trigger: ATCTGAGCCTTCAGTTAGTCATTTGGTCAAACCAAT...CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGACGTCTGTGGTGCCATaGTTCTCGAGTTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRTSVVP*FSSSRQ
Trigger: CTGTCTAGAACTCGAGAATCATGGCACCACAGACGT...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGTTTCATCAACTCCCTTaGCATAAGGTGGCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRFHQLP*HKVALK
Trigger: CTTTAGCGCCACCTTATGTCAAGGGAGTTGATGAAA...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTAGTACTTGGAATGTTTaGCATAGAATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQASTWNV*HRMALW
Trigger: CCAGAGAGCCATTCTATGTCAAACATTCCAAGTACT...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TGTGCTTGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTGGCCCTGCAAGGATTGGACCAGAAACTCATaGGATATCAAGAGACAGTTC +
Preference number: 4 (lower is better)
Translates to: CACSSGEALLKRSWPCKDWTRNS*DIKRQF
Trigger: GAACTGTCTCTTGATATCTCATGAGTTTCTGGTCCA...ATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACAAGCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR TCA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAAGAGTCAAATGCTTCCTaGGTTGAATGTTCTTGCTGC +
Preference number: 4 (lower is better)
Translates to: RRWPLRGTREASTNTDSQESNAS*VECSCC
Trigger: GCAGCAAGAACATTCAACTCAGGAAGCATTTGACTC...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGGTCATTTATGGTCTCTaGAGTACAACGAGTCAAATG +
Preference number: 4 (lower is better)
Translates to: ICSLLSGATHPCCGVTVRVIYGL*STTSQM
Trigger: CATTTGACTCGTTGTACTTCAGAGACCATAAATGAC...CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTAAGTGTCCTCTGTTTTaGCTTTATCAGCCGTTAACG +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAKCPLF*LYQPLT
Trigger: CGTTAACGGCTGATAAAGGCAAAACAGAGGACACTT...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCGAAAAGGTTTTGTTGTaGTTAGCAGGTTCTGATTTA +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSEKVLL*LAGSDL
Trigger: TAAATCAGAACCTGCTAAGCACAACAAAACCTTTTC...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGACCCCAATGCTGACTTaGAGCCAGCGGTCAGTTGGA +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELTPMLT*SQRSVG
Trigger: TCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGT...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGATCCTAGCTATTCCTaGTCTTGCTCGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGDPSYS*SCSETH
Trigger: GTGAGTCTCCGAGCAAGAGCAGGAATAGCTAGGATC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTATCCTTAAAACCTACTaGTTTAACAAAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TSRPEPVHILWGINSTSSILKTY*FNKSCS
Trigger: CGAGCAGCTTTTGTTAAAGCAGTAGGTTTTAAGGAT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAGGGCCCTGCGATACTaGTGTCTTGAAATTTCATCT +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRRALRY*CLEISS
Trigger: AGATGAAATTTCAAGACAGCAGTATCGCAGGGCCCT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AGCTCCCAAGTCGCTTGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAACATCCAAAGAGACGTTaGCACCATGTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: SSQVACRFQASFGRRLKEHPKRR*HHVSQK
Trigger: CTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATG...TTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACAAGCGACTTGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR GCA 90 bp AACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTGAAACGTCCAGTTTTTaGCATGTCACAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: NIQRDVATMFPRSSQVACETSSF*HVTRRR
Trigger: CCTTCTCCTTGTGACATGGCAAAAACTGGACGTTTC...ACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRSFKFA*GLRFEL
Trigger: CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTCCAATGCGGCTGGACTGCCTTGAATAATTGTGGTACTCAACTCGCTGGTGATAGCTTCAAATTTGCCTaGGGACTTCGGTTTGAACTG +
Preference number: 4 (lower is better)
Translates to: LQCGWTALNNCGTQLAGDSFKFA*GLRFEL
Trigger: CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT...ATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCCCCTGCCTGCGATACTaGTGTCTTGAAATTTCATCT +
Preference number: 4 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFPCLRY*CLEISS
Trigger: AGATGAAATTTCAAGACAGCAGTATCGCAGGCAGGG...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000430049.6
CDS-3UTR CCA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCGAAAAGTCTTGTCTCTaGTTTTATTTGAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: FPHTSRPEPVHILWGINSEKSCL*FYLKVP
Trigger: AGGCACTTTCAAATAAAACCAGAGACAAGACTTTTC...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGGGCACTGAGGCAAGGTaGTGCTTCCAGTTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELGTEAR*CFQLKG
Trigger: TCCCTTCAACTGGAAGCACCACCTTGCCTCAGTGCC...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCAGCATCTGTCGAACATaGCCAAGAAGCAACACTGAA +
Preference number: 4 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFSICRT*PRSNTE
Trigger: TTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCT...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp CTGAAGGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGCTTCTGCCTGTACGATaGTCTCAGCATCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: LKAQILGKEFQMVWRSNELLPVR*SQHLSN
Trigger: GTTCGACAGATGCTGAGACCATCGTACAGGCAGAAG...CTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACAATCATCAGAAATTCTaGATCCTGTCCATCATAACT +
Preference number: 4 (lower is better)
Translates to: SRPEPVHILWGINSTSSHNHQKF*ILSIIT
Trigger: AGTTATGATGGACAGGATCCAGAATTTCTGATGATT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAAGTCCCTGGGAGCATaGATCCTAGCTATTCCTGCT +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGKSLGA*ILAIPA
Trigger: AGCAGGAATAGCTAGGATCCATGCTCCCAGGGACTT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGAAAGAATTCCAAATaGTTTGGAGGTCAAACGAGT +
Preference number: 4 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSGKNSK*FGGQTS
Trigger: ACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCC...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGCCATTTCACGTCTGTaGTGCCATGATTCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVAISRL*CHDSRV
Trigger: AACTCGAGAATCATGGCACCACAGACGTGAAATGGC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGCCATTTCACGTCTGTaGTGCCATGATTCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVAISRL*CHDSRV
Trigger: AACTCGAGAATCATGGCACCACAGACGTGAAATGGC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTCTTTGTCCAGAGAGTTaGAATCTCAACGTGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQALCPES*NLNVCF
Trigger: GAAACACACGTTGAGATTCCAACTCTCTGGACAAAG...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACACATAGAATGGCTCTCTaGGACTCAAAAACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTHRMAL*DSKTSV
Trigger: CACTGAAGTTTTTGAGTCCCAGAGAGCCATTCTATG...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCATTACCAGGCAGACGATaGCCACTAAGAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RFQASFGRRLKEFSARNALPGRR*PLRGTR
Trigger: CCTCGTGCCTCTTAGTGGCCATCGTCTGCCTGGTAA...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp AGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTTATCCACCAGGCAGACGATaGCCACTAAGAGGCACGAGG +
Preference number: 4 (lower is better)
Translates to: RTGWYKKHFYLFCGMRSYPPGRR*PLRGTR
Trigger: CCTCGTGCCTCTTAGTGGCCATCGTCTGCCTGGTGG...ATAAGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585938.1
CDS-3UTR TCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGTGGTGAAGCCCTGTTaGAGAGATCTTGGCCCTGCA +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNVVKPC*RDLGPA
Trigger: TGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCAC...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCTACTGCTTCAACCTaGAGTGTAATTGATCCTTCA +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTSTAST*SVIDPS
Trigger: TGAAGGATCAATTACACTTCAGGTTGAAGCAGTAGA...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGTGCCTCTGCAATGGCTaGAGCAATGGTGCTGATCCT +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELCLCNG*SNGADP
Trigger: AGGATCAGCACCATTGCTTCAGCCATTGCAGAGGCA...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGCTCACGGCCAGCAGTTaGCTTATCTTTAGGACTTAT +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLLTASS*LIFRTY
Trigger: ATAAGTCCTAAAGATAAGTCAACTGCTGGCCGTGAG...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp CTAAAGATGACAGATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAATTCCTTGGAAAACGTaGAACAGCGCCAGGCTACAG +
Preference number: 4 (lower is better)
Translates to: LKMTDAISRLWCHDSRVLIPWKT*NSARLQ
Trigger: CTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAAT...TAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGGTCAATCGCTGTTCTaGACCAAAAGTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: KTSKETLPPCFPEAPKSLGQSLF*TKSVLK
Trigger: CTTCAGAACACTTTTGGTTCAGAACAGCGATTGACC...AAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACACCTTTGGGTGAATTCTaGTCTCACAGTTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTPLGEF*SHSYWS
Trigger: TGACCAGTAACTGTGAGATCAGAATTCACCCAAAGG...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000510237.5
CDS-3UTR TCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCCTTTGGGTGAATTCTaGTCTCACAGTTACTGGTCA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMPLGEF*SHSYWS
Trigger: TGACCAGTAACTGTGAGATCAGAATTCACCCAAAGG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGCTTTGGAAGAAGGCTaGAGGAATTCTCTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVALEEG*RNSLLE
Trigger: TTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGCTTTGGAAGAAGGCTaGAGGAATTCTCTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVALEEG*RNSLLE
Trigger: TTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTGACTGGTAAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: LTGKTSKETLPPCFPEAPNPEDL*LVKHPK
Trigger: CTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTT...GGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAGAAGAGGAGAACCCTaGGGACCTTTGACTGGTAAA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGRRGEP*GPLTGK
Trigger: TTTACCAGTCAAAGGTCCTCAGGGTTCTCCTCTTCT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGACCAAATGACTAACTaGAGGCTCAGATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGDQMTN*RLRYWG
Trigger: TCCCCAGTATCTGAGCCTTCAGTTAGTCATTTGGTC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAGACTTTAAGTGTCCGTaGTTCCCCCACACTAGTCGG +
Preference number: 4 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKDFKCP*FPHTSR
Trigger: CCGACTAGTGTGGGGGAATCACGGACACTTAAAGTC...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATTGCCTTCATCTGTTTaGATGACAAGCAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTLPSSV*MTSKAS
Trigger: TGAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAA...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTATGTAACAGGGCCCTaGGATACTGCTGTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMYVTGP*DTAVLK
Trigger: TTTCAAGACAGCAGTATCGCAGGGCCCTGTTACATA...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGACATCCAAAGAGACGTTaGCACCATGTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGHPKRR*HHVSQK
Trigger: CTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATG...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGAAACGTCCAGTTTTTaGCATGTCACAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVETSSF*HVTRRR
Trigger: CCTTCTCCTTGTGACATGGCAAAAACTGGACGTTTC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGCTAAAGATGACAGATaGCATTTCACGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVAKDDR*HFTSVV
Trigger: CACCACAGACGTGAAATGGCATCTGTCATCTTTAGC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTAGAACATCTGAATGCTaGATAGGTAGCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSRTSEC*IGSSKN
Trigger: GTTTTTAGAGCTACCTATGCAGCATTCAGATGTTCT...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGCAGTCACATCAAGCTaGCTGTTTTTGGATCCCATG +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRAVTSS*LFLDPM
Trigger: CATGGGATCCAAAAACAGGCAGCTTGATGTGACTGC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGCTCCCAAGTCGCTTGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAACTGTTGAAGAGATCTTaGCCCTGCAAGGATTCTGTA +
Preference number: 4 (lower is better)
Translates to: SSQVACRFQASFGRRLKELLKRS*PCKDSV
Trigger: TACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAG...TTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACAAGCGACTTGGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTATTCCTCCAATGCGGCTaGACTGCCTTGAATAATTGT +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVFLQCG*TALNNC
Trigger: ACAATTATTCAAGGCAGTCCAGCCGCATTGGAGGAA...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp GGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATGGCACTGAGGCAAGGTaGTGCTTCCAGTTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: GRRLKEFSARNAISEFSNGTEAR*CFQLKG
Trigger: TCCCTTCAACTGGAAGCACCACCTTGCCTCAGTGCC...ATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAGCTGCTGACCATATAACACTGAGGAGGGTCTaGGAAGCGATCCCGACACAG +
Preference number: 4 (lower is better)
Translates to: SQVTVVKLGHFKTAADHITLRRV*EAIPTQ
Trigger: CTGTGTCGGGATCGCTTCCCAGACCCTCCTCAGTGT...TATATGGTCAGCAGCTGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR CCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTATTGAGGAAGCCACTTTaGCCAAGAAATGCATCGTCT +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVLRKPL*PRNASS
Trigger: AGACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAA...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAGTGACTTCCTTGTTCTaGGACCTTGATATCCAAATA +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTVTSLF*DLDIQI
Trigger: TATTTGGATATCAAGGTCCCAGAACAAGGAAGTCAC...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAGAGTTATTCACAATCTaGAAACGTCCAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTELFTI*KRPVFA
Trigger: GGCAAAAACTGGACGTTTCCAGATTGTGAATAACTC...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCACCTGTACACATCCTCTaGGGCATAAACTCCACGAGC +
Preference number: 4 (lower is better)
Translates to: RFQASFGRRLKEFSARNAPVHIL*GINSTS
Trigger: GCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGG...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GTTTTTGCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGATTTTCATCCACTTGTaGAGTACTCTCTACTGCTTC +
Preference number: 4 (lower is better)
Translates to: VFAMSQGEGATRIKCSGRIFIHL*STLYCF
Trigger: GAAGCAGTAGAGAGTACTTCACAAGTGGATGAAAAT...CCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAGATGGAGTGGAAATTaGGGTAGCTTTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRRWSGN*GSFFIV
Trigger: AACGATGAAAAAGCTACCTCAATTTCCACTCCATCT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGAGATGGAGTGGAAATTaGGGTAGCTTTTTCATCGTT +
Preference number: 4 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLRWSGN*GSFFIV
Trigger: AACGATGAAAAAGCTACCTCAATTTCCACTCCATCT...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGAGAATGACTCAGTGGTaGCGTGGAAGGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELRMTQW*RGRSEA
Trigger: AGCTTCAGACCTTCCACGTCACCACTGAGTCATTCT...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTTGGACAAAATCGATGGAATATCACTAGGAGAAGAATaGCTCAGTGGTGACGTGGAA +
Preference number: 4 (lower is better)
Translates to: RGTPPQARNCLLDKIDGISLGEE*LSGDVE
Trigger: TTCCACGTCACCACTGAGTCATTCTTCTCCTAGTGA...TATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCGAGAAACCTGGCCACTaGACTCACGGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPEKPGH*THGQQL
Trigger: CAACTGCTGGCCGTGAGTTCAGTGGCCAGGTTTCTC...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTTATCCGACACAGCAAGCATaGGGAAGCTTCAACTCCTCG +
Preference number: 4 (lower is better)
Translates to: RTGWYKKHFYLFCGMRSYPTQQA*GSFNSS
Trigger: CGAGGAGTTGAAGCTTCCTCATGCTTGCTGTGTCGG...ATAAGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR TCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAATCTCTTCTGTGGCATaGGGTCTTATGATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVISSVA*GLMMAL
Trigger: TAAAGCCATCATAAGACCTCATGCCACAGAAGAGAT...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAAGCAGTCGTAAATGTTaGGTTGTAGATGCAGAATTA +
Preference number: 4 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTSSRKC*VVDAEL
Trigger: TAATTCTGCATCTACAACTCAACATTTACGACTGCT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGCTTTGGAAGAAGGCTaGAGGAATTCTCTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGALEEG*RNSLLE
Trigger: TTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAACCCTGAGGACCTTTaGCTGGTAAAACATCCAAAG +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGNPEDL*LVKHPK
Trigger: CTTTGGATGTTTTACCAGTCAAAGGTCCTCAGGGTT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAAGTACTTGGAATGTTTaGCATAGAATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTSTWNV*HRMALW
Trigger: CCAGAGAGCCATTCTATGTCAAACATTCCAAGTACT...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000510237.5
CDS-3UTR TCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGAAATGCTTCCTGAGTTaGATGTTCTTGCTGCACCAA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMKCFLS*MFLLHQ
Trigger: TTGGTGCAGCAAGAACATTCAACTCAGGAAGCATTT...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TTGACTGGTAAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTGTCCTCTGTTTTaGCTTTATCAGCCGTTAACG +
Preference number: 4 (lower is better)
Translates to: LTGKTSKETLPPCFPEAPKCPLF*LYQPLT
Trigger: CGTTAACGGCTGATAAAGGCAAAACAGAGGACACTT...GGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTGTGTTTTCTTCTGGTaGCCTCACACTTACACTAGT +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMCVFFW*PHTYTS
Trigger: ACTAGTGTAAGTGTGAGGGCACCAGAAGAAAACACA...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGTGCTTTAACAAAAGCTaGTCGGGAGCCAGTGTTGCG +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELCFNKS*SGASVA
Trigger: CGCAACACTGGCTCCCGAGCAGCTTTTGTTAAAGCA...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCGCTACCAGAATCAAGTaGTCGGGTAGGACAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFATRIK*SGRTVH
Trigger: GTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGC...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR GCA 90 bp GTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTATTTGTGTGACTGTGAGGCAATaGGCTGGCCAGCACAGCTCA +
Preference number: 4 (lower is better)
Translates to: VNGTCLHINYCTVILSICVTVRQ*AGQHSS
Trigger: TGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCAC...ACAAATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGGGACGTATCGCCCAGTaGAACCGAAGTATTATGAGC +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELGRIAQ*NRSIMS
Trigger: GCTCATAATACTTCGGTTGCACTGGGCGATACGTCC...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CCA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGATAGACCACACTCTGTaGGAGATCTGTTTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRIDHTL*EICFVF
Trigger: AAAGACAAAACAGATCTCCCACAGAGTGTGGTCTAT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGGTGAGACTATGCGATaGTTTTCAAAAGTCACATGC +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVGETMR*FSKVTC
Trigger: GCATGTGACTTTTGAAAACCATCGCATAGTCTCACC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TTATTCTGGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTGAGGCAGCCAGCGGTCAGTTaGATTAAGCACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LFWGSSLMNNYQMEWKLRQPAVS*IKHTEE
Trigger: CTCCTCAGTGTGCTTAATCCAACTGACCGCTGGCTG...CCTCAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAGCATCTGTCGAACATaGCCAAGAAGCAACACTGAA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGSICRT*PRSNTE
Trigger: TTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGAGCATCTGTCGAACATaGCCAAGAAGCAACACTGAA +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRSICRT*PRSNTE
Trigger: TTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCT...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGGAATTCCAAATGGTTTaGAGGTCAAACGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: ICSLLSGATHPCCGVTVREFQMV*RSNELK
Trigger: TTTTAACTCGTTTGACCTCCAAACCATTTGGAATTC...CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR CAA 72 bp CCTAGAGGGACTCCTCCCCAAGCCAGAAATTGTTTGTaGGACAAAATCGATGGAATATCTAAGCAAGGTCCA +
Preference number: 4 (lower is better)
Translates to: PRGTPPQARNCL*DKIDGISKQGP
Trigger: TGGACCTTGCTTAGATATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGTCTACTGCTTCAACCTaGAGTGTAATTGATCCTTCA +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLSTAST*SVIDPS
Trigger: TGAAGGATCAATTACACTTCAGGTTGAAGCAGTAGA...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTAGAGAAACCTGGCCACTaGACTCACGGCCAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: KEFQMVWRSNELKVPLELEKPGH*THGQQL
Trigger: CAACTGCTGGCCGTGAGTTCAGTGGCCAGGTTTCTC...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CTGAAGGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGATCTCTTCTGTGGCATaGGGTCTTATGATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: LKAQILGKEFQMVWRSNEISSVA*GLMMAL
Trigger: TAAAGCCATCATAAGACCTCATGCCACAGAAGAGAT...CTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CTCCAATGCGGCTGGACTGCCTTGAATAATTGTGGTACTCAACTCGCTGGTGATCTTGTTCTGGGACCTTaGTATCCAAATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: LQCGWTALNNCGTQLAGDLVLGP*YPNKLQ
Trigger: TTGAAGTTTATTTGGATATCAAGGTCCCAGAACAAG...ATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCTTAAAGCTAGTTTCTaGAGCTGTGTTCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMLKASF*SCVLPR
Trigger: TCTAGGTAGAACACAGCTTCAGAAACTAGCTTTAAG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACACTTAATGCCTGGTTGTaGTCGATTTCCAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTLNAWL*SISKLF
Trigger: AAACAACTTGGAAATCGATCACAACCAGGCATTAAG...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000510237.5
CDS-3UTR TCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGCTTAATGCCTGGTTGTaGTCGATTTCCAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLLNAWL*SISKLF
Trigger: AAACAACTTGGAAATCGATCACAACCAGGCATTAAG...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGCGATACTGCTGTCTTaGAATTTCATCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGAILLS*NFISTK
Trigger: TTTGGTGGAGATGAAATTTCAAGACAGCAGTATCGC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGGACCAAATGACTAACTaGAGGCTCAGATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELDQMTN*RLRYWG
Trigger: TCCCCAGTATCTGAGCCTTCAGTTAGTCATTTGGTC...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGATTGGTTTGACCAAATaGCTAACTGAAGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMIGLTK*LTEGSD
Trigger: ATCTGAGCCTTCAGTTAGTCATTTGGTCAAACCAAT...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GAATCATCATCCTGGAAGCTAAGCTGTAACCTCTCTCTTGGTTCAGCATCACTCAACTCTAGTCACAGGTaGCTGTATTTGGAACAGACA +
Preference number: 4 (lower is better)
Translates to: ESSSWKLSCNLSLGSASLNSSHR*LYLEQT
Trigger: TGTCTGTTCCAAATACAGTCACCTGTGACTAGAGTT...GAGTGATGCTGAACCAAGAGAGAGGTTACAGCTTAGCTTCCAGGATGATGATTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR GCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATAAGAGATCTTGGCCCTaGAAGGATTCTGTAGCTCCG +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNKRSWP*KDSVAP
Trigger: CGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTT...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGATTGGCACAGTGGCATaGGTTCGGTTTATCAATTTT +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMIGTVA*VRFINF
Trigger: AAAATTGATAAACCGAACGCATGCCACTGTGCCAAT...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTCAATTTTACTTTCTTTaGCAGGTACTAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAQFYFL*QVLSHS
Trigger: TGAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTG...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAAGGAGAACATCTGAATaGTGCATAGGTAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVRRTSE*CIGSSK
Trigger: TTTAGAGCTACCTATGCAGCATTCAGATGTTCTCCT...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAAGGAGAACATCTGAATaGTGCATAGGTAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVRRTSE*CIGSSK
Trigger: TTTAGAGCTACCTATGCAGCATTCAGATGTTCTCCT...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTCAGGCTCATTTTCTaGTTCGATGCTTTGTCCAGA +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRFRLIF*FDALSR
Trigger: TCTGGACAAAGCATCGAAGCAGAAAATGAGCCTGAA...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TTATTCTGGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTGAGGGTTGAATGTTCTTGCTaGACCAAGGCTGTCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LFWGSSLMNNYQMEWKLRVECSC*TKAVSP
Trigger: TGGGGAGACAGCCTTGGTGCAGCAAGAACATTCAAC...CCTCAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCCTTTATTCTTTTCGATaGACTCGTGACATTCACATG +
Preference number: 4 (lower is better)
Translates to: QRDVATMFPRSSQVACRFLYSFR*TRDIHM
Trigger: CATGTGAATGTCACGAGTCCATCGAAAAGAATAAAG...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAAAAGGGATGTTATTCTaGGGTTCCTCACTGATGAAT +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVKGMLF*GSSLMN
Trigger: ATTCATCAGTGAGGAACCCCAGAATAACATCCCTTT...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAGCTGCTGACCATATACAGCCAGCGGTCAGTTaGATTAAGCACACTGAGGAG +
Preference number: 4 (lower is better)
Translates to: SQVTVVKLGHFKTAADHIQPAVS*IKHTEE
Trigger: CTCCTCAGTGTGCTTAATCCAACTGACCGCTGGCTG...TATATGGTCAGCAGCTGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR CCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGAGTTATTCACAATCTaGAAACGTCCAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVELFTI*KRPVFA
Trigger: GGCAAAAACTGGACGTTTCCAGATTGTGAATAACTC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTGTGAGGCAATGCGCTaGCCAGCACAGCTCAAATCT +
Preference number: 4 (lower is better)
Translates to: SDTGERIPNGLEVKRVKSCEAMR*PAQLKS
Trigger: AGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACA...ACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGGAAAGAATTCCAAATaGTTTGGAGGTCAAACGAGT +
Preference number: 4 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVGKNSK*FGGQTS
Trigger: ACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR CAA 72 bp CTACCTAGAGGGACTCCTCCCCAAGCCAGAAATTGTTaGTTGGACAAAATCGATGGAATATCTAAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: LPRGTPPQARNC*LDKIDGISKQG
Trigger: ACCTTGCTTAGATATTCCATCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGAGGAGTCCCTCTAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCATTTTCGATGGACTCGTaGCATTCACATGTTCGCCTT +
Preference number: 4 (lower is better)
Translates to: RFQASFGRRLKEFSARNAFSMDS*HSHVRL
Trigger: AAGGCGAACATGTGAATGTCACGAGTCCATCGAAAA...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAGACATACTAGCCCTTaGAAAGTTTTCCAATGCACT +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGRHTSP*KVFQCT
Trigger: AGTGCATTGGAAAACTTTTCAAGGGCTAGTATGTCT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGTTCTAAATGACTCTTaGTTCTCACTCTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVVLNDS*FSLSPF
Trigger: AAATGGAGAGAGTGAGAATCAAGAGTCATTTAGAAC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp AGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTTATAGAATGACTCAGTGGTaGCGTGGAAGGTCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: RTGWYKKHFYLFCGMRSYRMTQW*RGRSEA
Trigger: AGCTTCAGACCTTCCACGTCACCACTGAGTCATTCT...ATAAGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAGCGGCTGGACTGCCTTaGATAATTGTGGTACTCAAC +
Preference number: 4 (lower is better)
Translates to: ASTNTDSQVTVVKLGHFKAAGLP*IIVVLN
Trigger: GTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGC...TTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGAATATCTGAAGAGCTaGTCTGTTTCTTTGGACTAT +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLEYLKS*SVSLDY
Trigger: ATAGTCCAAAGAAACAGATCAGCTCTTCAGATATTC...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGGAATATCTGAAGAGCTaGTCTGTTTCTTTGGACTAT +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMEYLKS*SVSLDY
Trigger: ATAGTCCAAAGAAACAGATCAGCTCTTCAGATATTC...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCTTGTTCTGGGACCTTaGTATCCAAATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMLVLGP*YPNKLQ
Trigger: TTGAAGTTTATTTGGATATCAAGGTCCCAGAACAAG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGACTTAAAGCTAGTTTCTaGAGCTGTGTTCTACCTAGA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGLKASF*SCVLPR
Trigger: TCTAGGTAGAACACAGCTTCAGAAACTAGCTTTAAG...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGAGCAGTCGTAAATGTTaGGTTGTAGATGCAGAATTA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMSSRKC*VVDAEL
Trigger: TAATTCTGCATCTACAACTCAACATTTACGACTGCT...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGGGTCAATCGCTGTTCTaGACCAAAAGTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELGQSLF*TKSVLK
Trigger: CTTCAGAACACTTTTGGTTCAGAACAGCGATTGACC...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCGACCAAATGACTAACTaGAGGCTCAGATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFDQMTN*RLRYWG
Trigger: TCCCCAGTATCTGAGCCTTCAGTTAGTCATTTGGTC...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp TTATTCTGGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTGAGGGACCAAATGACTAACTaGAGGCTCAGATACTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFWGSSLMNNYQMEWKLRDQMTN*RLRYWG
Trigger: TCCCCAGTATCTGAGCCTTCAGTTAGTCATTTGGTC...CCTCAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAATTTCATCAACTCCCTTaGCATAAGGTGGCGCTAAAG +
Preference number: 4 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKFHQLP*HKVALK
Trigger: CTTTAGCGCCACCTTATGTCAAGGGAGTTGATGAAA...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTGCCTTCATCTGTTTaGATGACAAGCAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRLPSSV*MTSKAS
Trigger: TGAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAA...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TTGACTGGTAAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGATACCATGGCAATaGCTGTGTGCATTAATAAAG +
Preference number: 4 (lower is better)
Translates to: LTGKTSKETLPPCFPEAPKIPWQ*LCALIK
Trigger: CTTTATTAATGCACACAGTCATTGCCATGGTATCTT...GGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTTACCAGTCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGATTGGCACAGTGGCATaGGTTCGGTTTATCAATTTT +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRIGTVA*VRFINF
Trigger: AAAATTGATAAACCGAACGCATGCCACTGTGCCAAT...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTATCCTTAAAACCTACTaGTTTAACAAAAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: KTSKETLPPCFPEAPKSLILKTY*FNKSCS
Trigger: CGAGCAGCTTTTGTTAAAGCAGTAGGTTTTAAGGAT...AAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGTATGTAACAGGGCCCTaGGATACTGCTGTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELYVTGP*DTAVLK
Trigger: TTTCAAGACAGCAGTATCGCAGGGCCCTGTTACATA...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCCATCCAAAGAGACGTTaGCACCATGTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFHPKRR*HHVSQK
Trigger: CTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATG...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR GCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGAGAACATCTGAATGCTaGATAGGTAGCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMRTSEC*IGSSKN
Trigger: GTTTTTAGAGCTACCTATGCAGCATTCAGATGTTCT...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGAGGAGAACATCTGAATaGTGCATAGGTAGCTCTAAA +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRRRTSE*CIGSSK
Trigger: TTTAGAGCTACCTATGCAGCATTCAGATGTTCTCCT...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTATTTGTCAAGCTGCTCAGGTATaGGAGCAGAAGCCTCTGACA +
Preference number: 4 (lower is better)
Translates to: VNGTCLHINYCTVILSICQAAQV*EQKPLT
Trigger: TGTCAGAGGCTTCTGCTCGCATACCTGAGCAGCTTG...ACAAATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp CTGAAGGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTCACTTAGCTGTGCCTaGGACTGTTCATTTAAATCT +
Preference number: 4 (lower is better)
Translates to: LKAQILGKEFQMVWRSNESLSCA*DCSFKS
Trigger: AGATTTAAATGAACAGTCCCAGGCACAGCTAAGTGA...CTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCCTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGTTGTCTTTGTATCTTTaGGGTTTGTTGCTCATGAAG +
Preference number: 4 (lower is better)
Translates to: KFACGLRFELHGHVDVMLLSLYL*GLLLMK
Trigger: CTTCATGAGCAACAAACCCCAAAGATACAAAGACAA...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGAGCATCTGTCGAACATaGCCAAGAAGCAACACTGAA +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELSICRT*PRSNTE
Trigger: TTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCT...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGACATCATTAGGTCGTTaGGGAAGATCATATACTTCA +
Preference number: 4 (lower is better)
Translates to: KASNLPADFGLNCTGMLMTSLGR*GRSYTS
Trigger: TGAAGTATATGATCTTCCCCAACGACCTAATGATGT...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
3UTR CAA 72 bp CCACTATCTGGTAGCTTGTCTTTGTATCTTTGGGGTTaGTTGCTCATGAAGAAAGTGTCCTCTGTTTTGCCT +
Preference number: 4 (lower is better)
Translates to: PLSGSLSLYLWG*LLMKKVSSVLP
Trigger: AGGCAAAACAGAGGACACTTTCTTCATGAGCAACAAACCCCAAAGATACAAAGACAAGCTACCAGATAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp CTGCACAAATATTTTCAAGATCCTTTCCTCGCAGGCTTCAGGATCCTTTGGAGTAGACATACTAGCCCTTaGAAAGTTTTCCAATGCACT +
Preference number: 4 (lower is better)
Translates to: LHKYFQDPFLAGFRILWSRHTSP*KVFQCT
Trigger: AGTGCATTGGAAAACTTTTCAAGGGCTAGTATGTCT...ACTCCAAAGGATCCTGAAGCCTGCGAGGAAAGGATCTTGAAAATATTTGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGTTCTAAATGACTCTTaGTTCTCACTCTCTCCATTT +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRVLNDS*FSLSPF
Trigger: AAATGGAGAGAGTGAGAATCAAGAGTCATTTAGAAC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATCACTATTTTTAGGTaGGACTATGCGATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGITIFR*DYAMVF
Trigger: GAAAACCATCGCATAGTCTCACCTAAAAATAGTGAT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp TCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAGGTGGTGCTTCCAGTTaGAGGGAGTGTTCCCAAATA +
Preference number: 4 (lower is better)
Translates to: STNTDSQVTVVKLGHFKTGGASS*RECSQI
Trigger: TATTTGGGAACACTCCCTTCAACTGGAAGCACCACC...TGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGACTTGTTCTGGGACCTTaGTATCCAAATAAACTTCAA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGLVLGP*YPNKLQ
Trigger: TTGAAGTTTATTTGGATATCAAGGTCCCAGAACAAG...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGGTCAATCGCTGTTCTaGACCAAAAGTGTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNGQSLF*TKSVLK
Trigger: CTTCAGAACACTTTTGGTTCAGAACAGCGATTGACC...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATGCTTTGGAAGAAGGCTaGAGGAATTCTCTGCTAGAA +
Preference number: 4 (lower is better)
Translates to: GRRLKEFSARNAISEFSNALEEG*RNSLLE
Trigger: TTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGC...ATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR TCA 90 bp CTTGTTTCTTATTTCAACTTTTGTGGAAGGCGGTTTTGTCATTGGTTTGACCAAACGTCTGTGGTGCCATaGTTCTCGAGTTCTAGACAG +
Preference number: 4 (lower is better)
Translates to: LVSYFNFCGRRFCHWFDQTSVVP*FSSSRQ
Trigger: CTGTCTAGAACTCGAGAATCATGGCACCACAGACGT...TTGGTCAAACCAATGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACGGCTCCTTAAGAGGGTaGCATTCAACATCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: RRLKEFSARNAISEFSNYGSLRG*HSTSQN
Trigger: GTTTTGGGATGTTGAATGTCACCCTCTTAAGGAGCC...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGAGTACTTGGAATGTTTaGCATAGAATGGCTCTCTGG +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELSTWNV*HRMALW
Trigger: CCAGAGAGCCATTCTATGTCAAACATTCCAAGTACT...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp GATTCCTTGGAAAACGTGAAACAGCGCCAGGCTACAGCGTTAGCATTAATAATCTTGCCTTCATCTGTTTaGATGACAAGCAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: DSLENVKQRQATALALIILPSSV*MTSKAS
Trigger: TGAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAA...GATTATTAATGCTAACGCTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCACAACAAAAGGGGTCTaGGAGAAAGATACCATGGCA +
Preference number: 4 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFTTKGV*EKDTMA
Trigger: TGCCATGGTATCTTTCTCTCAGACCCCTTTTGTTGT...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTATGCAATCAAATCAAATaGTTCAGAACCAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVCNQIK*FRTRSE
Trigger: TTCAGATCTGGTTCTGAAGCATTTGATTTGATTGCA...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR GCA 90 bp CTTGTTTCTTATTTCAACTTTTGTGGAAGGCGGTTTTGTCATTGGTTTGACCAAGATCCTAGCTATTCCTaGTCTTGCTCGGAGACTCAC +
Preference number: 4 (lower is better)
Translates to: LVSYFNFCGRRFCHWFDQDPSYS*SCSETH
Trigger: GTGAGTCTCCGAGCAAGAGCAGGAATAGCTAGGATC...TTGGTCAAACCAATGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAAACAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TTATTCTGGGGTTCCTCACTGATGAATAACTATCAGATGGAGTGGAAATTGAGGTATGTAACAGGGCCCTaGGATACTGCTGTCTTGAAA +
Preference number: 4 (lower is better)
Translates to: LFWGSSLMNNYQMEWKLRYVTGP*DTAVLK
Trigger: TTTCAAGACAGCAGTATCGCAGGGCCCTGTTACATA...CCTCAATTTCCACTCCATCTGATAGTTATTCATCAGTGAGGAACCCCAGAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: RFQASFGRRLKEFSARNAISRLW*HDSRVL
Trigger: TAGAACTCGAGAATCATGGCACCACAGACGTGAAAT...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELISRLW*HDSRVL
Trigger: TAGAACTCGAGAATCATGGCACCACAGACGTGAAAT...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AAAGTGTCCTCTGTTTTGCCTTTATCAGCCGTTAACGTCACATCATTTTCATCCGCTAAAGATGACAGATaGCATTTCACGTCTGTGGTG +
Preference number: 4 (lower is better)
Translates to: KVSSVLPLSAVNVTSFSSAKDDR*HFTSVV
Trigger: CACCACAGACGTGAAATGGCATCTGTCATCTTTAGC...GGATGAAAATGATGTGACGTTAACGGCTGATAAAGGCAAAACAGAGGACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAGAACATCTGAATGCTaGATAGGTAGCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGRTSEC*IGSSKN
Trigger: GTTTTTAGAGCTACCTATGCAGCATTCAGATGTTCT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACGCAGTCACATCAAGCTaGCTGTTTTTGGATCCCATG +
Preference number: 4 (lower is better)
Translates to: RRLKEFSARNAISEFSNYAVTSS*LFLDPM
Trigger: CATGGGATCCAAAAACAGGCAGCTTGATGTGACTGC...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000430049.6
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCCTGAGGTGGGAAGATTaGTTGAGGTCAGGAGATCGA +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPLRWED*LRSGDR
Trigger: TCGATCTCCTGACCTCAAGCAATCTTCCCACCTCAG...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CCA 90 bp TCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTAGGATAGGAGCTCTCTaGTTCAGACACATACGTCAG +
Preference number: 4 (lower is better)
Translates to: SDTGERIPNGLEVKRVKSRIGAL*FRHIRQ
Trigger: CTGACGTATGTGTCTGAACCAGAGAGCTCCTATCCT...ACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp GAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCTTCCTCCAATGCGGCTaGACTGCCTTGAATAATTGT +
Preference number: 4 (lower is better)
Translates to: EASTNTDSQVTVVKLGHFFLQCG*TALNNC
Trigger: ACAATTATTCAAGGCAGTCCAGCCGCATTGGAGGAA...GAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCCTTCTGCCTGTACGATaGTCTCAGCATCTGTCGAAC +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPLLPVR*SQHLSN
Trigger: GTTCGACAGATGCTGAGACCATCGTACAGGCAGAAG...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGAATCATCAGAAATTCTaGATCCTGTCCATCATAACT +
Preference number: 4 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMNHQKF*ILSIIT
Trigger: AGTTATGATGGACAGGATCCAGAATTTCTGATGATT...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTATGTGAGGCAATGCGCTaGCCAGCACAGCTCAAATCT +
Preference number: 4 (lower is better)
Translates to: KEFQMVWRSNELKVPLELCEAMR*PAQLKS
Trigger: AGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACA...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGAATTCCAAATGGTTTaGAGGTCAAACGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: SFKFACGLRFELHGHVDVEFQMV*RSNELK
Trigger: TTTTAACTCGTTTGACCTCCAAACCATTTGGAATTC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR TCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGGTCTCTGGTTTTATTTaGAAGTGCCTTGATCATTGC +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELVSGFI*KCLDHC
Trigger: GCAATGATCAAGGCACTTTCAAATAAAACCAGAGAC...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR TCA 90 bp CTAAAGATGACAGATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTATTAATGGCTTCACACTaGAAATCAAGTAGAATCACC +
Preference number: 4 (lower is better)
Translates to: LKMTDAISRLWCHDSRVLLMASH*KSSRIT
Trigger: GGTGATTCTACTTGATTTTCAGTGTGAAGCCATTAA...TAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATCTGTCATCTTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCAGCTATTCCTGCTCTTaGTCGGAGACTCACACTTCT +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPSYSCS*SETHTS
Trigger: AGAAGTGTGAGTCTCCGAGCAAGAGCAGGAATAGCT...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGCAATTTTACTTTCTTTaGCAGGTACTAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: AFICLNDKQSFKFACGLRQFYFL*QVLSHS
Trigger: TGAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTG...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCCATCCAAAGAGACGTTaGCACCATGTTTCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPHPKRR*HHVSQK
Trigger: CTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATG...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp CCCAGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTCAAGCACAACAATCTTaGGTTCCTTATTATTCATCC +
Preference number: 4 (lower is better)
Translates to: PRTGWYKKHFYLFCGMRSQAQQS*VPYYSS
Trigger: GGATGAATAATAAGGAACCCAAGATTGTTGTGCTTG...AGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGTCACTTAGCTGTGCCTaGGACTGTTCATTTAAATCT +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELSLSCA*DCSFKS
Trigger: AGATTTAAATGAACAGTCCCAGGCACAGCTAAGTGA...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGAATTCCAAATGGTTTaGAGGTCAAACGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGEFQMV*RSNELK
Trigger: TTTTAACTCGTTTGACCTCCAAACCATTTGGAATTC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGGGAAAGAATTCCAAATaGTTTGGAGGTCAAACGAGT +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELGKNSK*FGGQTS
Trigger: ACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCC...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGGCGGTTTTGTCATTaGTTTGACCAAATGACTAAC +
Preference number: 4 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKRRFCH*FDQMTN
Trigger: GTTAGTCATTTGGTCAAACCAATGACAAAACCGCCT...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATCATAGAATGGCTCTCTaGGACTCAAAAACTTCAGTG +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNHRMAL*DSKTSV
Trigger: CACTGAAGTTTTTGAGTCCCAGAGAGCCATTCTATG...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp CCCAGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTAAACCTTGTCATTTATaGTCTCTGAAGTACAACGAG +
Preference number: 4 (lower is better)
Translates to: PRTGWYKKHFYLFCGMRSKPCHL*SLKYNE
Trigger: CTCGTTGTACTTCAGAGACCATAAATGACAAGGTTT...AGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAGCTGCTGACCATATAATCTCTTCTGTGGCATaGGGTCTTATGATGGCTTTA +
Preference number: 4 (lower is better)
Translates to: SQVTVVKLGHFKTAADHIISSVA*GLMMAL
Trigger: TAAAGCCATCATAAGACCTCATGCCACAGAAGAGAT...TATATGGTCAGCAGCTGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR TCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATTTGCCTTCATCTGTTTaGATGACAAGCAAAGCTTCA +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNLPSSV*MTSKAS
Trigger: TGAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAA...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATATTGGCACAGTGGCATaGGTTCGGTTTATCAATTTT +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNIGTVA*VRFINF
Trigger: AAAATTGATAAACCGAACGCATGCCACTGTGCCAAT...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCGAAACGTCCAGTTTTTaGCATGTCACAAGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPETSSF*HVTRRR
Trigger: CCTTCTCCTTGTGACATGGCAAAAACTGGACGTTTC...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR GCA 90 bp TCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: SDTGERIPNGLEVKRVKSISRLW*HDSRVL
Trigger: TAGAACTCGAGAATCATGGCACCACAGACGTGAAAT...ACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCATCTAATAAGCTAGTGTaGCTTAGGTCACTCTTTAGA +
Preference number: 4 (lower is better)
Translates to: RFQASFGRRLKEFSARNASNKLV*LRSLFR
Trigger: TCTAAAGAGTGACCTAAGCCACACTAGCTTATTAGA...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp GAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCGGTAGACAAATAACTTaGCTTTCCTCAGACTCTTTG +
Preference number: 4 (lower is better)
Translates to: EASTNTDSQVTVVKLGHFGRQIT*LSSDSL
Trigger: CAAAGAGTCTGAGGAAAGCCAAGTTATTTGTCTACC...GAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCTTTATTCTTTTCGATaGACTCGTGACATTCACATG +
Preference number: 4 (lower is better)
Translates to: CLNDKQSFKFACGLRFELLYSFR*TRDIHM
Trigger: CATGTGAATGTCACGAGTCCATCGAAAAGAATAAAG...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAACATCATTAGGTCGTTaGGGAAGATCATATACTTCA +
Preference number: 4 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKTSLGR*GRSYTS
Trigger: TGAAGTATATGATCTTCCCCAACGACCTAATGATGT...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTAGCCATTTCACGTCTGTaGTGCCATGATTCTCGAGTT +
Preference number: 4 (lower is better)
Translates to: KEFQMVWRSNELKVPLELAISRL*CHDSRV
Trigger: AACTCGAGAATCATGGCACCACAGACGTGAAATGGC...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR CAA 72 bp CTAAGCATAGAATCACCACTATCTGGTAGCTTGTCTTaGTATCTTTGGGGTTTGTTGCTCATGAAGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LSIESPLSGSLS*YLWGLLLMKKV
Trigger: CACTTTCTTCATGAGCAACAAACCCCAAAGATACAAAGACAAGCTACCAGATAGTGGTGATTCTATGCTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp TGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATATCACTATTTTTAGGTaGGACTATGCGATGGTTTTC +
Preference number: 4 (lower is better)
Translates to: CRFQASFGRRLKEFSARNITIFR*DYAMVF
Trigger: GAAAACCATCGCATAGTCTCACCTAAAAATAGTGAT...ATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR TCA 90 bp GGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATAGCAGTCGTAAATGTTaGGTTGTAGATGCAGAATTA +
Preference number: 4 (lower is better)
Translates to: GRRLKEFSARNAISEFSNSSRKC*VVDAEL
Trigger: TAATTCTGCATCTACAACTCAACATTTACGACTGCT...ATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp GCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCAAACTTAATGCCTGGTTGTaGTCGATTTCCAAGTTGTTT +
Preference number: 4 (lower is better)
Translates to: ASTNTDSQVTVVKLGHFKLNAWL*SISKLF
Trigger: AAACAACTTGGAAATCGATCACAACCAGGCATTAAG...TTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCATTTCACGTCTGTGGTaGCATGATTCTCGAGTTCTA +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPISRLW*HDSRVL
Trigger: TAGAACTCGAGAATCATGGCACCACAGACGTGAAAT...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CCA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAGAAAAGTCTTGTCTCTaGTTTTATTTGAAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKEKSCL*FYLKVP
Trigger: AGGCACTTTCAAATAAAACCAGAGACAAGACTTTTC...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCGGTGAGACTATGCGATaGTTTTCAAAAGTCACATGC +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPGETMR*FSKVTC
Trigger: GCATGTGACTTTTGAAAACCATCGCATAGTCTCACC...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CCA 90 bp GTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTATTTGTAATAATCAGTCTAATTaGCACAGTGGCATGCGTTCG +
Preference number: 4 (lower is better)
Translates to: VNGTCLHINYCTVILSICNNQSN*HSGMRS
Trigger: CGAACGCATGCCACTGTGCCAATTAGACTGATTATT...ACAAATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp AGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTTATGTGACTTCCTTGTTCTaGGACCTTGATATCCAAATA +
Preference number: 4 (lower is better)
Translates to: RTGWYKKHFYLFCGMRSYVTSLF*DLDIQI
Trigger: TATTTGGATATCAAGGTCCCAGAACAAGGAAGTCAC...ATAAGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp TCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCAGTAGGCGGTTTTGTCATTaGTTTGACCAAATGACTAAC +
Preference number: 4 (lower is better)
Translates to: SIKELNIIRSLGKIIYFSRRFCH*FDQMTN
Trigger: GTTAGTCATTTGGTCAAACCAATGACAAAACCGCCT...ACTGAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR TCA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTAGCGATACTGCTGTCTTaGAATTTCATCTCCACCAAA +
Preference number: 4 (lower is better)
Translates to: KEFQMVWRSNELKVPLELAILLS*NFISTK
Trigger: TTTGGTGGAGATGAAATTTCAAGACAGCAGTATCGC...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp GGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATCAATTTTACTTTCTTTaGCAGGTACTAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: GRRLKEFSARNAISEFSNQFYFL*QVLSHS
Trigger: TGAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTG...ATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp AGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTTATAGAACATCTGAATGCTaGATAGGTAGCTCTAAAAAC +
Preference number: 4 (lower is better)
Translates to: RTGWYKKHFYLFCGMRSYRTSEC*IGSSKN
Trigger: GTTTTTAGAGCTACCTATGCAGCATTCAGATGTTCT...ATAAGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp CTTGTTTCTTATTTCAACTTTTGTGGAAGGCGGTTTTGTCATTGGTTTGACCAAGAGTTATTCACAATCTaGAAACGTCCAGTTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LVSYFNFCGRRFCHWFDQELFTI*KRPVFA
Trigger: GGCAAAAACTGGACGTTTCCAGATTGTGAATAACTC...TTGGTCAAACCAATGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAAACAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR CAA 72 bp AACTTAATGCCTGGTTGTGATCGATTTCCAAGTTGTTaGATTTCTAGTCTAGCCAACATGCAAGATAATCGA +
Preference number: 4 (lower is better)
Translates to: NLMPGCDRFPSC*ISSLANMQDNR
Trigger: TCGATTATCTTGCATGTTGGCTAGACTAGAAATCAAACAACTTGGAAATCGATCACAACCAGGCATTAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp TCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTCAATTTTACTTTCTTTaGCAGGTACTAAGCCATTCA +
Preference number: 4 (lower is better)
Translates to: SDTGERIPNGLEVKRVKSQFYFL*QVLSHS
Trigger: TGAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTG...ACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCTATCCAAATCTGATGTaGTACGTGATTTCCTCAACA +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPYPNLM*YVISST
Trigger: TGTTGAGGAAATCACGTAGCACATCAGATTTGGATA...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CCA 90 bp TCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAGCTGCTGACCATATATCACCAATGTTCAAATaGTCACTTTTCACCATTAAC +
Preference number: 4 (lower is better)
Translates to: SQVTVVKLGHFKTAADHISPMFK*SLFTIN
Trigger: GTTAATGGTGAAAAGTGACCATTTGAACATTGGTGA...TATATGGTCAGCAGCTGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000585938.1
CDS-3UTR GCA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCCTTCACATCAACTACTaGACTGTTATTCTCTCTATT +
Preference number: 4 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPLHINY*TVILSI
Trigger: AATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAG...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR GCA 90 bp TATAATTTTACACATGCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGCTTCACATCAACTACTaGACTGTTATTCTCTCTATT +
Preference number: 4 (lower is better)
Translates to: YNFTHASIKELNIIRSLGLHINY*TVILSI
Trigger: AATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAG...CCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGCATGTGTAAAATTATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR GCA 90 bp GTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTATTTGTGAAAAGGTTTTGTTGTaGTTAGCAGGTTCTGATTTA +
Preference number: 4 (lower is better)
Translates to: VNGTCLHINYCTVILSICEKVLL*LAGSDL
Trigger: TAAATCAGAACCTGCTAAGCACAACAAAACCTTTTC...ACAAATAGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CCA 90 bp CTTGTTTCTTATTTCAACTTTTGTGGAAGGCGGTTTTGTCATTGGTTTGACCAAAATCATCAGAAATTCTaGATCCTGTCCATCATAACT +
Preference number: 4 (lower is better)
Translates to: LVSYFNFCGRRFCHWFDQNHQKF*ILSIIT
Trigger: AGTTATGATGGACAGGATCCAGAATTTCTGATGATT...TTGGTCAAACCAATGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAAACAAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CCA 90 bp TATAATTTTACACATGCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGGAATTCCAAATGGTTTaGAGGTCAAACGAGTTAAAA +
Preference number: 4 (lower is better)
Translates to: YNFTHASIKELNIIRSLGEFQMV*RSNELK
Trigger: TTTTAACTCGTTTGACCTCCAAACCATTTGGAATTC...CCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGCATGTGTAAAATTATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
3UTR CAA 72 bp GTAGCTTTTTCATCGTTACCAACATCTTGTAATTTGTaGTCAATGGAACATGTCTTCACATCAACTACTGCA +
Preference number: 4 (lower is better)
Translates to: VAFSSLPTSCNL*SMEHVFTSTTA
Trigger: TGCAGTAGTTGATGTGAAGACATGTTCCATTGACAACAAATTACAAGATGTTGGTAACGATGAAAAAGCTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp GCTGATCCAGAGGCGGGCGAGCCGCCCGTGAGAGAAGAGGAGAACCCTGAGGACGGAAACGTCCAGTTTTaGCCATGTCACAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ADPEAGEPPVREEENPEDGNVQF*PCHKEK
Trigger: CTTCTCCTTGTGACATGGCAAAAACTGGACGTTTCC...GTCCTCAGGGTTCTCCTCTTCTCTCACGGGCGGCTCGCCCGCCTCTGGATCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGTGGTGAAGCCCTGTaGAAGAGATCTTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: PHTSRPEPVHILWGINSTSGEAL*KRSWPC
Trigger: GCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACT...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TGCGGCGTGACTGTGAGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACGCAGGCATCATGTGGTaGACCACAGAAGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: CGVTVRQCAGQHSSNLSNAGIMW*TTEGPA
Trigger: AGCAGGCCCTTCTGTGGTCAACCACATGATGCCTGC...GTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCTCACAGTCACGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGGCTGAGGTGGGAAGATaGCTTGAGGTCAGGAGATCG +
Preference number: 5 (lower is better)
Translates to: PHTSRPEPVHILWGINSTAEVGR*LEVRRS
Trigger: CGATCTCCTGACCTCAAGCAATCTTCCCACCTCAGC...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp AGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTGGTCCTAGTGGTGAAGCCCTGTaGAAGAGATCTTGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: RSWPCKDSVAPAGSSSGPSGEAL*KRSWPC
Trigger: GCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACT...AGGACCAGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR CAA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATTCGCCTTTCACAAGTaGGTGACCAAATGGCATCAG +
Preference number: 5 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGAFAFHK*VTKWHQ
Trigger: CTGATGCCATTTGGTCACCAACTTGTGAAAGGCGAA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp GCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGCGGGCTGTGGGAGATCTGTTTaGTCTTTATTCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: ARVGQSTALRRPADPEAGCGRSV*SLFFSM
Trigger: CATCGAAAAGAATAAAGACAAAACAGATCTCCCACA...GCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGCAGGCATCATGTGGTaGACCACAGAAGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSAGIMW*TTEGPA
Trigger: AGCAGGCCCTTCTGTGGTCAACCACATGATGCCTGC...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp CCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGGTAAGTGCTGCTTTCTaGAGGAAGCCACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: PHTSRPEPVHILWGINSTVSAAF*RKPLWP
Trigger: TGGCCAAAGTGGCTTCCTCAAGAAAGCAGCACTTAC...CGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGGCGGGCACAATTTTACTTTCTTaGCCAGGTACTAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: ARVGQSTALRRPADPEAGTILLS*PGTKPF
Trigger: GAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTGT...GCCCGCCTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS CCA 90 bp GAGTCTTGTGCTTGTTCCAGTGGTGAAGCCCTGTTGAAGAGATCTTaGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTGGT +
Preference number: 5 (lower is better)
Translates to: ESCACSSGEALLKRS*PCKDSVAPAGSSSG
Trigger: ACCAGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACAAGCACAAGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325971.12
ENST00000506447.5
ENST00000513432.5
ENST00000589596.5
CDS-3UTR CAA 90 bp ATTTGTAGTTTACTCTCTGGCGCGACACATCCATGCTGCGGCGTGACTGTGAGGCTGGTGATATCACTCTaGCGGTCCTCCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: ICSLLSGATHPCCGVTVRLVISL*RSSRAS
Trigger: TGATGCCCTGGAGGACCGCAAGAGTGATATCACCAG...CCTCACAGTCACGCCGCAGCATGGATGTGTCGCGCCAGAGAGTAAACTACAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGGACCCCAATGCTGACTaGCAGCCAGCGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRDPNAD*QPAVSW
Trigger: CCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTC...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCTTGAGGAAGCCACTTaGGCCAAGAAATGCATCGTC +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSLEEAT*AKKCIV
Trigger: GACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAAG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCTCAAGCTGCCTGTTTTaGGATCCCATGGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSSSCLF*DPMAFQ
Trigger: CTGGAAAGCCATGGGATCCAAAAACAGGCAGCTTGA...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGTGTAACAGGGCCTTCTaGTGTTCTTTCCTTGAGTAC +
Preference number: 5 (lower is better)
Translates to: SSARVGQSTALRRPADPECNRAF*CSFLEY
Trigger: GTACTCAAGGAAAGAACACAAGAAGGCCCTGTTACA...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508150.2
CDS-3UTR CAA 90 bp GTTTTTGCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGAGCGCTGAGAGAGGGTaGTGTCAAGAGTGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: VFAMSQGEGATRIKCSGRSAERG*CQECVH
Trigger: GTGCACGCACTCTTGACACAACCCTCTCTCAGCGCT...CCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGCAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGACCCCAATGCTGACTaGCAGCCAGCGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: KTSKETLPPCFPEAPKSLDPNAD*QPAVSW
Trigger: CCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTC...AAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAGCTCGGACGGATTCCTaGGAAAACGTGAAACAGCGC +
Preference number: 5 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTARTDS*ENVKQR
Trigger: GCGCTGTTTCACGTTTTCCAAGGAATCCGTCCGAGC...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAAGCAGGCATCATGTGGTaGACCACAGAAGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: RRWPLRGTREASTNTDSQAGIMW*TTEGPA
Trigger: AGCAGGCCCTTCTGTGGTCAACCACATGATGCCTGC...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATCCCCAAGCCAGAAATaGTTTGTTGGACAAAATCGA +
Preference number: 5 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGASPSQK*FVGQNR
Trigger: TCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATGCGATACTGCTGTCTaGAAATTTCATCTCCACCAA +
Preference number: 5 (lower is better)
Translates to: VRDSPTLVGRNLYTSSGACDTAV*KFHLHQ
Trigger: TTGGTGGAGATGAAATTTCAAGACAGCAGTATCGCA...TGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTTTCTGCTTCGATGCTTaGTCCAGAGAGTTGGAATCT +
Preference number: 5 (lower is better)
Translates to: LPESSARVGQSTALRRPAFCFDA*SRELES
Trigger: AGATTCCAACTCTCTGGACAAAGCATCGAAGCAGAA...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCCCTGCGGACTTCGGTTaGAACTGCACGGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: QRDVATMFPRSSQVACRFPADFG*NCTGML
Trigger: CAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGG...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTTCAAGCTGCCTGTTTTaGGATCCCATGGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: TSRPEPVHILWGINSTSSSSCLF*DPMAFQ
Trigger: CTGGAAAGCCATGGGATCCAAAAACAGGCAGCTTGA...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTAGGTGGGAAGATTGCTaGAGGTCAGGAGATCGAGAC +
Preference number: 5 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSRWEDC*RSGDRD
Trigger: GTCTCGATCTCCTGACCTCAAGCAATCTTCCCACCT...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGTTGTATCTTTGGGGTTaGTTGCTCATGAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SSARVGQSTALRRPADPELYLWG*LLMKKV
Trigger: CACTTTCTTCATGAGCAACAAACCCCAAAGATACAA...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACCCACTATCTGGTAGCTaGTCTTTGTATCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SRPEPVHILWGINSTSSHPLSGS*SLYLWG
Trigger: ACCCCAAAGATACAAAGACAAGCTACCAGATAGTGG...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAAGCGCTGAGAGAGGGTaGTGTCAAGAGTGCGTGCAC +
Preference number: 5 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTSAERG*CQECVH
Trigger: GTGCACGCACTCTTGACACAACCCTCTCTCAGCGCT...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp GGCACGAGGGAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGACCCCAATGCTGACTaGCAGCCAGCGGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: GTREASTNTDSQVTVVKLDPNAD*QPAVSW
Trigger: CCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTC...CAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR CAA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCGCTCGGACGGATTCCTaGGAAAACGTGAAACAGCGC +
Preference number: 5 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFARTDS*ENVKQR
Trigger: GCGCTGTTTCACGTTTTCCAAGGAATCCGTCCGAGC...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGGCAGGCATCATGTGGTaGACCACAGAAGGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMAGIMW*TTEGPA
Trigger: AGCAGGCCCTTCTGTGGTCAACCACATGATGCCTGC...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGAAAGCAGTCCTGATCTaGTCCTCTAATAAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: EGATRIKCSGRTVHGSSEKAVLI*SSNKQS
Trigger: CGACTGCTTATTAGAGGACAAGATCAGGACTGCTTT...CTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTGGAAACGTCCAGTTTTaGCCATGTCACAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TSRPEPVHILWGINSTSSGNVQF*PCHKEK
Trigger: CTTCTCCTTGTGACATGGCAAAAACTGGACGTTTCC...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGCCTGCGGACTTCGGTTaGAACTGCACGGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: KFACGLRFELHGHVDVMLPADFG*NCTGML
Trigger: CAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGG...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGCCTGCGGACTTCGGTTaGAACTGCACGGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMPADFG*NCTGML
Trigger: CAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGG...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTAGCAAAGCTTCAAATTaGCCTGCGGACTTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: TSRPEPVHILWGINSTSSSKASN*PADFGL
Trigger: CAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTGATCCAGAGTCAAGCACAACAATCTaGGGTTCCTTATTATTCATC +
Preference number: 5 (lower is better)
Translates to: SSARVGQSTALRRPADPESSTTI*GSLLFI
Trigger: GATGAATAATAAGGAACCCAAGATTGTTGTGCTTGA...CTCTGGATCAGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp GCAAAAGGAGCAGCGCTGAGAGAGGGTTGTGTCAAGAGTGCGTGCACAGCAGCAAAAGTGTCCTCTGTTTaGCCTTTATCAGCCGTTAAC +
Preference number: 5 (lower is better)
Translates to: AKGAALREGCVKSACTAAKVSSV*PLSAVN
Trigger: GTTAACGGCTGATAAAGGCAAAACAGAGGACACTTT...TGCTGCTGTGCACGCACTCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCTCTGGTAGCTTGTCTTaGTATCTTTGGGGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSSGSLS*YLWGLL
Trigger: CAACAAACCCCAAAGATACAAAGACAAGCTACCAGA...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp GCAAAAGGAGCAGCGCTGAGAGAGGGTTGTGTCAAGAGTGCGTGCACAGCAGCAGATCATTGCAGCAAGTaGGGAAGGATCAGTATTAAC +
Preference number: 5 (lower is better)
Translates to: AKGAALREGCVKSACTAADHCSK*GRISIN
Trigger: GTTAATACTGATCCTTCCCAACTTGCTGCAATGATC...TGCTGCTGTGCACGCACTCTTGACACAACCCTCTCTCAGCGCTGCTCCTTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCTGGTGATATCACTCTaGCGGTCCTCCAGGGCATCA +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMLVISL*RSSRAS
Trigger: TGATGCCCTGGAGGACCGCAAGAGTGATATCACCAG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTTGCGGCTGGACTGCCTaGAATAATTGTGGTACTCAA +
Preference number: 5 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSCGWTA*NNCGTQ
Trigger: TTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCA...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGTTCAATTCCACAGTTaGTACCAACAGACGGCACAG +
Preference number: 5 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSVQFHS*YQQTAQ
Trigger: CTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAAC...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGGCTCGGACGGATTCCTaGGAAAACGTGAAACAGCGC +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMARTDS*ENVKQR
Trigger: GCGCTGTTTCACGTTTTCCAAGGAATCCGTCCGAGC...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCTTCGATATCAACTTTaGCCGAGAATTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSLRYQL*PRILLL
Trigger: CAGCAGAAGAATTCTCGGCAAAAGTTGATATCGAAG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACACTTGAGGAAGCCACTTaGGCCAAGAAATGCATCGTC +
Preference number: 5 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTLEEAT*AKKCIV
Trigger: GACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAAG...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GGAGCTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCGCCAGAAATTGTTTGTaGGACAAAATCGATGGAATA +
Preference number: 5 (lower is better)
Translates to: GATRIKCSGRTVHGSSEAARNCL*DKIDGI
Trigger: TATTCCATCGATTTTGTCCAACAAACAATTTCTGGC...GGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp CTACCAGAATCAAGTGCTCGGGTAGGACAGTCCACGGCTCTTCGGAGGCCAGCTCGATTTCCAAGTTGTTaGATTTCTAGTCTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: LPESSARVGQSTALRRPARFPSC*ISSLAN
Trigger: GTTGGCTAGACTAGAAATCAAACAACTTGGAAATCG...AGCTGGCCTCCGAAGAGCCGTGGACTGTCCTACCCGAGCACTTGATTCTGGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGCCTGCGGACTTCGGTTaGAACTGCACGGGCATGTTG +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRPADFG*NCTGML
Trigger: CAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGG...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGCTCCTCTTCTGGTGTAAAGCTGACTGTTaGCTGAGAGCATTTGACAAA +
Preference number: 5 (lower is better)
Translates to: EEILALQGFCSSGWLLFWCKADC*LRAFDK
Trigger: TTTGTCAAATGCTCTCAGCAAACAGTCAGCTTTACA...CCAGAAGAGGAGCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000507064.2
CDS-3UTR CAA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACCTTGTCTTTGTATCTTaGGGGTTTGTTGCTCATGAA +
Preference number: 5 (lower is better)
Translates to: SRPEPVHILWGINSTSSHLVFVS*GFVAHE
Trigger: TTCATGAGCAACAAACCCCAAAGATACAAAGACAAG...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp CTCCAATGCGGCTGGACTGCCTTGAATAATTGTGGTACTCAACTCGCTGGTGATCCAATTCCTCAGGGTTaGATGTCCAACCTACCTCAC +
Preference number: 5 (lower is better)
Translates to: LQCGWTALNNCGTQLAGDPIPQG*MSNLPH
Trigger: GTGAGGTAGGTTGGACATCAAACCCTGAGGAATTGG...ATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTATCCAGAGCCGATATTaGATCCTAGACAAATTCCCA +
Preference number: 5 (lower is better)
Translates to: TSRPEPVHILWGINSTSSIQSRY*ILDKFP
Trigger: TGGGAATTTGTCTAGGATCAAATATCGGCTCTGGAT...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGCTTGAGGAAGCCACTTaGGCCAAGAAATGCATCGTC +
Preference number: 5 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLLEEAT*AKKCIV
Trigger: GACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAAG...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCGATTTCCAAGTTGTTaGATTTCTAGTCTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSRFPSC*ISSLAN
Trigger: GTTGGCTAGACTAGAAATCAAACAACTTGGAAATCG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCCTTCCAAAATAAGATaGCTTGTTCCTCCATATCCA +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSPSKIR*LVPPYP
Trigger: TGGATATGGAGGAACAAGCAATCTTATTTTGGAAGG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCAACATCATTAGGTCGTaGGGGAAGATCATATACTTC +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSNIIRS*GKIIYF
Trigger: GAAGTATATGATCTTCCCCAACGACCTAATGATGTT...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAACATCCAAAGAGACGTaGCCACCATGTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTTSKET*PPCFPE
Trigger: TTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAAGCAAAGCTTCAAATTaGCCTGCGGACTTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTSKASN*PADFGL
Trigger: CAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAATGCGGCTGGACTGCCTaGAATAATTGTGGTACTCAA +
Preference number: 5 (lower is better)
Translates to: RRWPLRGTREASTNTDSQCGWTA*NNCGTQ
Trigger: TTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCA...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGAGGTGGTGCTTCCAGTaGAAGGGAGTGTTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMRWCFQ*KGVFPN
Trigger: ATTTGGGAACACTCCCTTCAACTGGAAGCACCACCT...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp TTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCCTAAACAACGATATGTaGAAAGATCCACCTTTTCAC +
Preference number: 5 (lower is better)
Translates to: FPHTSRPEPVHILWGINSLNNDM*KDPPFH
Trigger: GTGAAAAGGTGGATCTTTCAACATATCGTTGTTTAG...GGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp GATTCCTTGGAAAACGTGAAACAGCGCCAGGCTACAGCGTTAGCATTAATAATCGCTCGGACGGATTCCTaGGAAAACGTGAAACAGCGC +
Preference number: 5 (lower is better)
Translates to: DSLENVKQRQATALALIIARTDS*ENVKQR
Trigger: GCGCTGTTTCACGTTTTCCAAGGAATCCGTCCGAGC...GATTATTAATGCTAACGCTGTAGCCTGGCGCTGTTTCACGTTTTCCAAGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTAGTAAGTGCTGCTTTCTaGAGGAAGCCACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVVSAAF*RKPLWP
Trigger: TGGCCAAAGTGGCTTCCTCAAGAAAGCAGCACTTAC...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACGCCAGAAATTGTTTGTaGGACAAAATCGATGGAATA +
Preference number: 5 (lower is better)
Translates to: SRPEPVHILWGINSTSSHARNCL*DKIDGI
Trigger: TATTCCATCGATTTTGTCCAACAAACAATTTCTGGC...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACACAATTTTACTTTCTTaGCCAGGTACTAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: SRPEPVHILWGINSTSSHTILLS*PGTKPF
Trigger: GAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTGT...GTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCACATCCAAAGAGACGTaGCCACCATGTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFTSKET*PPCFPE
Trigger: TTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGT...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCGGAAACGTCCAGTTTTaGCCATGTCACAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QRDVATMFPRSSQVACRFGNVQF*PCHKEK
Trigger: CTTCTCCTTGTGACATGGCAAAAACTGGACGTTTCC...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GTTTTTGCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGCACTCCACGGGAACATaGACTGTTTTGTGGATAAGG +
Preference number: 5 (lower is better)
Translates to: VFAMSQGEGATRIKCSGRHSTGT*TVLWIR
Trigger: CCTTATCCACAAAACAGTCAATGTTCCCGTGGAGTG...CCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGCAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTCAAGCTGCCTGTTTTaGGATCCCATGGCTTTCCAG +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMSSCLF*DPMAFQ
Trigger: CTGGAAAGCCATGGGATCCAAAAACAGGCAGCTTGA...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAACACCGGATGAATGTCTaGAGTAGTTTGTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: RRWPLRGTREASTNTDSQHRMNV*SSLFFG
Trigger: CCCAAAGAACAAACTACTCAAGACATTCATCCGGTG...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAGTTCAATTCCACAGTTaGTACCAACAGACGGCACAG +
Preference number: 5 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTVQFHS*YQQTAQ
Trigger: CTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAAC...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTCTTCGATATCAACTTTaGCCGAGAATTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQALRYQL*PRILLL
Trigger: CAGCAGAAGAATTCTCGGCAAAAGTTGATATCGAAG...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAAAAAGCAGTCCTGATCTaGTCCTCTAATAAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: RRWPLRGTREASTNTDSQKAVLI*SSNKQS
Trigger: CGACTGCTTATTAGAGGACAAGATCAGGACTGCTTT...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACATCCTCTCGATTTCCAAGTTGTTaGATTTCTAGTCTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: LSVRDSPTLVGRNLYTSSRFPSC*ISSLAN
Trigger: GTTGGCTAGACTAGAAATCAAACAACTTGGAAATCG...AGAGGATGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTGTTGCAGTTTTATTATaGATTCCTCTGTCTGATGGA +
Preference number: 5 (lower is better)
Translates to: TSRPEPVHILWGINSTSSVAVLL*IPLSDG
Trigger: TCCATCAGACAGAGGAATCAATAATAAAACTGCAAC...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTTGCGATACTGCTGTCTaGAAATTTCATCTCCACCAA +
Preference number: 5 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQACDTAV*KFHLHQ
Trigger: TTGGTGGAGATGAAATTTCAAGACAGCAGTATCGCA...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTACACTCCACGGGAACATaGACTGTTTTGTGGATAAGG +
Preference number: 5 (lower is better)
Translates to: SFKFACGLRFELHGHVDVHSTGT*TVLWIR
Trigger: CCTTATCCACAAAACAGTCAATGTTCCCGTGGAGTG...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp CTCCAATGCGGCTGGACTGCCTTGAATAATTGTGGTACTCAACTCGCTGGTGATGCTTTGTCCAGAGAGTaGGAATCTCAACGTGTGTTT +
Preference number: 5 (lower is better)
Translates to: LQCGWTALNNCGTQLAGDALSRE*ESQRVF
Trigger: AAACACACGTTGAGATTCCAACTCTCTGGACAAAGC...ATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp ACTAGTCGGCCGGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTGAATTATTTCGCAGATaGACTTTAAGTGTCCGTGAT +
Preference number: 5 (lower is better)
Translates to: TSRPEPVHILWGINSTSSELFRR*TLSVRD
Trigger: ATCACGGACACTTAAAGTCAATCTGCGAAATAATTC...ACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCCGGCCGACTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp CTGTACGATGGTCTCAGCATCTGTCGAACATGGCCAAGAAGCAACACTGAATGTAGCAAAGCTTCAAATTaGCCTGCGGACTTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: LYDGLSICRTWPRSNTECSKASN*PADFGL
Trigger: CAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCT...ACATTCAGTGTTGCTTCTTGGCCATGTTCGACAGATGCTGAGACCATCGTACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACACTTGCCTTCATCTGTTaGAATGACAAGCAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTLAFIC*NDKQSF
Trigger: GAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAAG...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTACTCCAAGCAAGCACATaGACCCTTACACTCACTTGT +
Preference number: 5 (lower is better)
Translates to: SFKFACGLRFELHGHVDVLQAST*TLTLTC
Trigger: ACAAGTGAGTGTAAGGGTCAATGTGCTTGCTTGGAG...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCACCGGATGAATGTCTaGAGTAGTTTGTTCTTTGGG +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMHRMNV*SSLFFG
Trigger: CCCAAAGAACAAACTACTCAAGACATTCATCCGGTG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp TTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACCTGTACACAACTGACACACTCATTTaGCCTCTGATTTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: LTLSVRDSPTLVGRNLYTTDTLI*PLIFSV
Trigger: AACAGAGAAAATCAGAGGCAAAATGAGTGTGTCAGT...TGTGTACAGGTTCCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGCTTCGATATCAACTTTaGCCGAGAATTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRLRYQL*PRILLL
Trigger: CAGCAGAAGAATTCTCGGCAAAAGTTGATATCGAAG...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GATGCCATTTCACGTCTGTGGTGCCATGATTCTCGAGTTCTAGACAGCTCTCTGTCCCCAAGCCAGAAATaGTTTGTTGGACAAAATCGA +
Preference number: 5 (lower is better)
Translates to: DAISRLWCHDSRVLDSSLSPSQK*FVGQNR
Trigger: TCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGA...CAGAGAGCTGTCTAGAACTCGAGAATCATGGCACCACAGACGTGAAATGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGACATCCAAAGAGACGTaGCCACCATGTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRTSKET*PPCFPE
Trigger: TTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGT...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAGGAAACGTCCAGTTTTaGCCATGTCACAAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGGNVQF*PCHKEK
Trigger: CTTCTCCTTGTGACATGGCAAAAACTGGACGTTTCC...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGCACTCCACGGGAACATaGACTGTTTTGTGGATAAGG +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRHSTGT*TVLWIR
Trigger: CCTTATCCACAAAACAGTCAATGTTCCCGTGGAGTG...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAGCAAAGCTTCAAATTaGCCTGCGGACTTCGGTTTG +
Preference number: 5 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGSKASN*PADFGL
Trigger: CAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGACGATGGCCACTAAGAGGCACGAGGGAAGCATCCACCAATACTGATTCACAACTAAACAACGATATGTaGAAAGATCCACCAGGCAGA +
Preference number: 5 (lower is better)
Translates to: RRWPLRGTREASTNTDSQLNNDM*KDPPGR
Trigger: TCTGCCTGGTGGATCTTTCAACATATCGTTGTTTAG...TTGTGAATCAGTATTGGTGGATGCTTCCCTCGTGCCTCTTAGTGGCCATCGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585938.1
CDS-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTATATCTTTGGGGTTTGTaGCTCATGAAGAAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: SFKFACGLRFELHGHVDVYLWGL*LMKKVS
Trigger: GGACACTTTCTTCATGAGCAACAAACCCCAAAGATA...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCCTTGTCTTTGTATCTTaGGGGTTTGTTGCTCATGAA +
Preference number: 5 (lower is better)
Translates to: QRDVATMFPRSSQVACRFLVFVS*GFVAHE
Trigger: TTCATGAGCAACAAACCCCAAAGATACAAAGACAAG...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAGATCATTGCAGCAAGTaGGGAAGGATCAGTATTAAC +
Preference number: 5 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTDHCSK*GRISIN
Trigger: GTTAATACTGATCCTTCCCAACTTGCTGCAATGATC...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACAACATGCTTCTCACTGTaGCTTATTTCACTGACACAC +
Preference number: 5 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTTCFSL*LISLTH
Trigger: GTGTGTCAGTGAAATAAGCAACAGTGAGAAGCATGT...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCCAATTCCTCAGGGTTaGATGTCCAACCTACCTCAC +
Preference number: 5 (lower is better)
Translates to: CLNDKQSFKFACGLRFELPIPQG*MSNLPH
Trigger: GTGAGGTAGGTTGGACATCAAACCCTGAGGAATTGG...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp CCCAGGACTGGATGGTATAAAAAGCACTTTTATCTCTTCTGTGGCATGAGGTCTGTTCAATTCCACAGTTaGTACCAACAGACGGCACAG +
Preference number: 5 (lower is better)
Translates to: PRTGWYKKHFYLFCGMRSVQFHS*YQQTAQ
Trigger: CTGTGCCGTCTGTTGGTACAAACTGTGGAATTGAAC...AGACCTCATGCCACAGAAGAGATAAAAGTGCTTTTTATACCATCCAGTCCTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000513432.5
ENST00000585938.1
CDS-3UTR CAA 90 bp AAAACATCCAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTCTTCGATATCAACTTTaGCCGAGAATTCTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: KTSKETLPPCFPEAPKSLLRYQL*PRILLL
Trigger: CAGCAGAAGAATTCTCGGCAAAAGTTGATATCGAAG...AAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAGTAAGTGCTGCTTTCTaGAGGAAGCCACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKVSAAF*RKPLWP
Trigger: TGGCCAAAGTGGCTTCCTCAAGAAAGCAGCACTTAC...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GTTTTTGCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGCAAGCCAGAAATTGTTaGTTGGACAAAATCGATGGA +
Preference number: 5 (lower is better)
Translates to: VFAMSQGEGATRIKCSGRQARNC*LDKIDG
Trigger: TCCATCGATTTTGTCCAACAAACAATTTCTGGCTTG...CCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp AGCTCCCAAGTCGCTTGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATCCCCAAGCCAGAAATaGTTTGTTGGACAAAATCGA +
Preference number: 5 (lower is better)
Translates to: SSQVACRFQASFGRRLKESPSQK*FVGQNR
Trigger: TCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGA...TTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACAAGCGACTTGGGAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGTCCCCAAGCCAGAAATaGTTTGTTGGACAAAATCGA +
Preference number: 5 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMSPSQK*FVGQNR
Trigger: TCGATTTTGTCCAACAAACAATTTCTGGCTTGGGGA...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGAAAGCAGTCCTGATCTaGTCCTCTAATAAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRKAVLI*SSNKQS
Trigger: CGACTGCTTATTAGAGGACAAGATCAGGACTGCTTT...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GTTTTTGCCATGTCACAAGGAGAAGGAGCTACCAGAATCAAGTGCTCGGGTAGGCCTTCCAAAATAAGATaGCTTGTTCCTCCATATCCA +
Preference number: 5 (lower is better)
Translates to: VFAMSQGEGATRIKCSGRPSKIR*LVPPYP
Trigger: TGGATATGGAGGAACAAGCAATCTTATTTTGGAAGG...CCTACCCGAGCACTTGATTCTGGTAGCTCCTTCTCCTTGTGACATGGCAAAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp CAAAGAGACGTTGCCACCATGTTTCCCAGAAGCTCCCAAGTCGCTTGTAGATTCAACATCATTAGGTCGTaGGGGAAGATCATATACTTC +
Preference number: 5 (lower is better)
Translates to: QRDVATMFPRSSQVACRFNIIRS*GKIIYF
Trigger: GAAGTATATGATCTTCCCCAACGACCTAATGATGTT...GAATCTACAAGCGACTTGGGAGCTTCTGGGAAACATGGTGGCAACGTCTCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR CAA 90 bp TTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCACACTAGTCGGCCGGAACATCATTAGGTCGTaGGGGAAGATCATATACTTC +
Preference number: 5 (lower is better)
Translates to: LFRRLTLSVRDSPTLVGRNIIRS*GKIIYF
Trigger: GAAGTATATGATCTTCCCCAACGACCTAATGATGTT...CCGGCCGACTAGTGTGGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GGAACCTGTACACATCCTCTGGGGCATAAACTCCACGAGCAGTCACATCAAGCTGAATTATTTCGCAGATaGACTTTAAGTGTCCGTGAT +
Preference number: 5 (lower is better)
Translates to: GTCTHPLGHKLHEQSHQAELFRR*TLSVRD
Trigger: ATCACGGACACTTAAAGTCAATCTGCGAAATAATTC...AGCTTGATGTGACTGCTCGTGGAGTTTATGCCCCAGAGGATGTGTACAGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGCTTGCCTTCATCTGTTaGAATGACAAGCAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: KASNLPADFGLNCTGMLMLAFIC*NDKQSF
Trigger: GAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAAG...CATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGATGGTCTTTTCACATaGTTACCACCACCAAGGCAA +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRDGLFT*LPPPRQ
Trigger: TTGCCTTGGTGGTGGTAACAATGTGAAAAGACCATC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCACAAAACTGTCTTATTTaGGTGAGGACACTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: RFQASFGRRLKEFSARNAQNCLI*VRTLCP
Trigger: GGGGCAGAGTGTCCTCACCAAAATAAGACAGTTTTG...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAAAAGTGTCCTCTGTTTaGCCTTTATCAGCCGTTAAC +
Preference number: 5 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGKVSSV*PLSAVN
Trigger: GTTAACGGCTGATAAAGGCAAAACAGAGGACACTTT...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AGCTGCCTGTTTTTGGATCCCATGGCTTTCCAGCAGACCAGAAATAGGAGAACATTGTATCTTTGGGGTTaGTTGCTCATGAAGAAAGTG +
Preference number: 5 (lower is better)
Translates to: SCLFLDPMAFQQTRNRRTLYLWG*LLMKKV
Trigger: CACTTTCTTCATGAGCAACAAACCCCAAAGATACAA...TGTTCTCCTATTTCTGGTCTGCTGGAAAGCCATGGGATCCAAAAACAGGCAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510237.5
CDS-3UTR CAA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGACTGACACACTCATTTaGCCTCTGATTTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMTDTLI*PLIFSV
Trigger: AACAGAGAAAATCAGAGGCAAAATGAGTGTGTCAGT...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGTGTCCTCTGTTTTGCCTTTATCAGCCGTTAACGTCACATCATTTTCATCCCTTGAGGAAGCCACTTaGGCCAAGAAATGCATCGTC +
Preference number: 5 (lower is better)
Translates to: KVSSVLPLSAVNVTSFSSLEEAT*AKKCIV
Trigger: GACGATGCATTTCTTGGCCAAAGTGGCTTCCTCAAG...GGATGAAAATGATGTGACGTTAACGGCTGATAAAGGCAAAACAGAGGACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGCAAGCCAGAAATTGTTaGTTGGACAAAATCGATGGA +
Preference number: 5 (lower is better)
Translates to: KFACGLRFELHGHVDVMLQARNC*LDKIDG
Trigger: TCCATCGATTTTGTCCAACAAACAATTTCTGGCTTG...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTACCTTCCAAAATAAGATaGCTTGTTCCTCCATATCCA +
Preference number: 5 (lower is better)
Translates to: SFKFACGLRFELHGHVDVPSKIR*LVPPYP
Trigger: TGGATATGGAGGAACAAGCAATCTTATTTTGGAAGG...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTGCGATACTGCTGTCTaGAAATTTCATCTCCACCAA +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRCDTAV*KFHLHQ
Trigger: TTGGTGGAGATGAAATTTCAAGACAGCAGTATCGCA...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAACATCCAAAGAGACGTaGCCACCATGTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: RFQASFGRRLKEFSARNATSKET*PPCFPE
Trigger: TTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGT...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR CAA 90 bp AGGCAATGCGCTGGCCAGCACAGCTCAAATCTCAGTAACCTCACAGAGTTATTCGAATTATTTCGCAGATaGACTTTAAGTGTCCGTGAT +
Preference number: 5 (lower is better)
Translates to: RQCAGQHSSNLSNLTELFELFRR*TLSVRD
Trigger: ATCACGGACACTTAAAGTCAATCTGCGAAATAATTC...GAATAACTCTGTGAGGTTACTGAGATTTGAGCTGTGCTGGCCAGCGCATTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp CTCCAATGCGGCTGGACTGCCTTGAATAATTGTGGTACTCAACTCGCTGGTGATGAATTATTTCGCAGATaGACTTTAAGTGTCCGTGAT +
Preference number: 5 (lower is better)
Translates to: LQCGWTALNNCGTQLAGDELFRR*TLSVRD
Trigger: ATCACGGACACTTAAAGTCAATCTGCGAAATAATTC...ATCACCAGCGAGTTGAGTACCACAATTATTCAAGGCAGTCCAGCCGCATTGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS TCA 90 bp CTCTGTGGGAGATCTGTTTTGTCTTTATTCTTTTCGATGGACTCGTaGCATTCACATGTTCGCCTTTCACAAGTTGGTGACCAAATGGCA +
Preference number: 5 (lower is better)
Translates to: LCGRSVLSLFFSMDS*HSHVRLSQVGDQMA
Trigger: TGCCATTTGGTCACCAACTTGTGAAAGGCGAACATGTGAATGTCACGAGTCCATCGAAAAGAATAAAGACAAAACAGATCTCCCACAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325971.12
ENST00000506447.5
ENST00000510237.5
ENST00000511820.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCTTCGCCTTTCACAAGTaGGTGACCAAATGGCATCAG +
Preference number: 5 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFFAFHK*VTKWHQ
Trigger: CTGATGCCATTTGGTCACCAACTTGTGAAAGGCGAA...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGTGTGGGAGATCTGTTTaGTCTTTATTCTTTTCGATG +
Preference number: 5 (lower is better)
Translates to: KFACGLRFELHGHVDVMLCGRSV*SLFFSM
Trigger: CATCGAAAAGAATAAAGACAAAACAGATCTCCCACA...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000510237.5
ENST00000513432.5
CDS-3UTR CAA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAACCACTATCTGGTAGCTaGTCTTTGTATCTTTGGGGT +
Preference number: 5 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKPLSGS*SLYLWG
Trigger: ACCCCAAAGATACAAAGACAAGCTACCAGATAGTGG...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AGAAGGCTGAAGGAATTCTCTGCTAGAAATGCAATCTCTGAATTCTCCAATTACAGGTGGTGCTTCCAGTaGAAGGGAGTGTTCCCAAAT +
Preference number: 5 (lower is better)
Translates to: RRLKEFSARNAISEFSNYRWCFQ*KGVFPN
Trigger: ATTTGGGAACACTCCCTTCAACTGGAAGCACCACCT...GTAATTGGAGAATTCAGAGATTGCATTTCTAGCAGAGAATTCCTTCAGCCTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGCCAGAAATTGTTTGTaGGACAAAATCGATGGAATA +
Preference number: 5 (lower is better)
Translates to: KFACGLRFELHGHVDVMLARNCL*DKIDGI
Trigger: TATTCCATCGATTTTGTCCAACAAACAATTTCTGGC...CAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGCGATTTCCAAGTTGTTaGATTTCTAGTCTAGCCAAC +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRRFPSC*ISSLAN
Trigger: GTTGGCTAGACTAGAAATCAAACAACTTGGAAATCG...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAACAATTTTACTTTCTTaGCCAGGTACTAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: SFKFACGLRFELHGHVDVTILLS*PGTKPF
Trigger: GAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTGT...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGCTCCCAAGTCGCTTGTAGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAAACAATTTTACTTTCTTaGCCAGGTACTAAGCCATTC +
Preference number: 5 (lower is better)
Translates to: SSQVACRFQASFGRRLKETILLS*PGTKPF
Trigger: GAATGGCTTAGTACCTGGCAAAGAAAGTAAAATTGT...TTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCTACAAGCGACTTGGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGGTTGCAGTTTTATTATaGATTCCTCTGTCTGATGGA +
Preference number: 5 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMVAVLL*IPLSDG
Trigger: TCCATCAGACAGAGGAATCAATAATAAAACTGCAAC...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGCACGGGCATGTTGATGTAGTTGCAGTTTTATTATaGATTCCTCTGTCTGATGGA +
Preference number: 5 (lower is better)
Translates to: SFKFACGLRFELHGHVDVVAVLL*IPLSDG
Trigger: TCCATCAGACAGAGGAATCAATAATAAAACTGCAAC...TACATCAACATGCCCGTGCAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCACATCCAAAGAGACGTaGCCACCATGTTTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFTSKET*PPCFPE
Trigger: TTCTGGGAAACATGGTGGCAACGTCTCTTTGGATGT...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR CAA 90 bp GAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGAATGTTCTTATTTCAACTTTaGTGGAAGGCGGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: ELHGHVDVMLGSQRVLGMFLFQL*WKAVLS
Trigger: TGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAA...CATTCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp CTTCGGTTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTATTCTTATTTCAACTTTaGTGGAAGGCGGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: LRFELHGHVDVMLGSQRVFLFQL*WKAVLS
Trigger: TGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAA...TACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAACCGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp AGATTCCAAGCTAGCTTTGGAAGAAGGCTGAAGGAATTCTCTGCTAGAAATGCATATCTTTGGGGTTTGTaGCTCATGAAGAAAGTGTCC +
Preference number: 5 (lower is better)
Translates to: RFQASFGRRLKEFSARNAYLWGL*LMKKVS
Trigger: GGACACTTTCTTCATGAGCAACAAACCCCAAAGATA...TGCATTTCTAGCAGAGAATTCCTTCAGCCTTCTTCCAAAGCTAGCTTGGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCGTAAGTGCTGCTTTCTaGAGGAAGCCACTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPVSAAF*RKPLWP
Trigger: TGGCCAAAGTGGCTTCCTCAAGAAAGCAGCACTTAC...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCCTTCATCTGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGGCCAGAAATTGTTTGTaGGACAAAATCGATGGAATA +
Preference number: 5 (lower is better)
Translates to: AFICLNDKQSFKFACGLRARNCL*DKIDGI
Trigger: TATTCCATCGATTTTGTCCAACAAACAATTTCTGGC...CCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACAGATGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TTTGAACTGCACGGGCATGTTGATGTAATGCTGGGCTCTCAAAGAGTACTTGGATTCTTATTTCAACTTTaGTGGAAGGCGGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: FELHGHVDVMLGSQRVLGFLFQL*WKAVLS
Trigger: TGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAA...TCCAAGTACTCTTTGAGAGCCCAGCATTACATCAACATGCCCGTGCAGTTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS GCA 90 bp CAACAGACTGTAATTAATTGTAGCTCCCCAGGACGTATCGCCCAGTaGAACCGAAGTATTATGAGCATCTATGTTTTCTTCCTGTATAAA +
Preference number: 5 (lower is better)
Translates to: QQTVINCSSPGRIAQ*NRSIMSIYVFFLYK
Trigger: TTTATACAGGAAGAAAACATAGATGCTCATAATACTTCGGTTGCACTGGGCGATACGTCCTGGGGAGCTACAATTAATTACAGTCTGTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506447.5
ENST00000510237.5
CDS-3UTR CAA 90 bp GGCTCAGATACTGGGGAAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAACATCATTAGGTCGTaGGGGAAGATCATATACTTC +
Preference number: 5 (lower is better)
Translates to: GSDTGERIPNGLEVKRVKNIIRS*GKIIYF
Trigger: GAAGTATATGATCTTCCCCAACGACCTAATGATGTT...TTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTTCCCCAGTATCTGAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCCACTCCACGGGAACATaGACTGTTTTGTGGATAAGG +
Preference number: 5 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPHSTGT*TVLWIR
Trigger: CCTTATCCACAAAACAGTCAATGTTCCCGTGGAGTG...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCAGTTCTGGTAGCTTGTCTTaGTATCTTTGGGGTTTGTTG +
Preference number: 5 (lower is better)
Translates to: SIKELNIIRSLGKIIYFSSGSLS*YLWGLL
Trigger: CAACAAACCCCAAAGATACAAAGACAAGCTACCAGA...ACTGAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp GAAGCATCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCCAAGCCAGAAATTGTTaGTTGGACAAAATCGATGGA +
Preference number: 5 (lower is better)
Translates to: EASTNTDSQVTVVKLGHFQARNC*LDKIDG
Trigger: TCCATCGATTTTGTCCAACAAACAATTTCTGGCTTG...GAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGATGCTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCAAAGCAGTCCTGATCTaGTCCTCTAATAAGCAGTCG +
Preference number: 5 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPKAVLI*SSNKQS
Trigger: CGACTGCTTATTAGAGGACAAGATCAGGACTGCTTT...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp GCTTCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCAACATCATTAGGTCGTaGGGGAAGATCATATACTTC +
Preference number: 5 (lower is better)
Translates to: ASIKELNIIRSLGKIIYFNIIRS*GKIIYF
Trigger: GAAGTATATGATCTTCCCCAACGACCTAATGATGTT...GAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000430049.6
ENST00000508150.2
ENST00000513432.5
CDS-3UTR CAA 90 bp TGTTTGAATGACAAGCAAAGCTTCAAATTTGCCTGCGGACTTCGGTTTGAACTGTTCTTATTTCAACTTTaGTGGAAGGCGGTTTTGTCA +
Preference number: 5 (lower is better)
Translates to: CLNDKQSFKFACGLRFELFLFQL*WKAVLS
Trigger: TGACAAAACCGCCTTCCACAAAAGTTGAAATAAGAA...CAGTTCAAACCGAAGTCCGCAGGCAAATTTGAAGCTTTGCTTGTCATTCAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS-3UTR CAA 90 bp TCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAGCTGCTGACCATATACTTGCCTTCATCTGTTaGAATGACAAGCAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: SQVTVVKLGHFKTAADHILAFIC*NDKQSF
Trigger: GAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAAG...TATATGGTCAGCAGCTGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TTTGTTGTCAATGGAACATGTCTTCACATCAACTACTGCACTGTTATTCTCTCTACATGCTTCTCACTGTaGCTTATTTCACTGACACAC +
Preference number: 5 (lower is better)
Translates to: FVVNGTCLHINYCTVILSTCFSL*LISLTH
Trigger: GTGTGTCAGTGAAATAAGCAACAGTGAGAAGCATGT...AGAGAGAATAACAGTGCAGTAGTTGATGTGAAGACATGTTCCATTGACAACAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TCCACCAATACTGATTCACAAGTAACAGTCGTAAAACTGGGACATTTCAAAACAATCCAGAGCCGATATTaGATCCTAGACAAATTCCCA +
Preference number: 5 (lower is better)
Translates to: STNTDSQVTVVKLGHFKTIQSRY*ILDKFP
Trigger: TGGGAATTTGTCTAGGATCAAATATCGGCTCTGGAT...TGTTTTGAAATGTCCCAGTTTTACGACTGTTACTTGTGAATCAGTATTGGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp TCCATAAAAGAGCTGAACATCATTAGGTCGTTGGGGAAGATCATATACTTCAGTCCTTCCAAAATAAGATaGCTTGTTCCTCCATATCCA +
Preference number: 5 (lower is better)
Translates to: SIKELNIIRSLGKIIYFSPSKIR*LVPPYP
Trigger: TGGATATGGAGGAACAAGCAATCTTATTTTGGAAGG...ACTGAAGTATATGATCTTCCCCAACGACCTAATGATGTTCAGCTCTTTTATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTACAAATGCTTCCTGAGTaGAATGTTCTTGCTGCACCA +
Preference number: 5 (lower is better)
Translates to: KEFQMVWRSNELKVPLELQMLPE*NVLAAP
Trigger: TGGTGCAGCAAGAACATTCAACTCAGGAAGCATTTG...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000513432.5
CDS-3UTR CAA 90 bp AAAGAATTCCAAATGGTTTGGAGGTCAAACGAGTTAAAAGTTCCACTTGAGTTACTTGCCTTCATCTGTTaGAATGACAAGCAAAGCTTC +
Preference number: 5 (lower is better)
Translates to: KEFQMVWRSNELKVPLELLAFIC*NDKQSF
Trigger: GAAGCTTTGCTTGTCATTCAAACAGATGAAGGCAAG...TAACTCAAGTGGAACTTTTAACTCGTTTGACCTCCAAACCATTTGGAATTCTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000430049.6
ENST00000513432.5
CDS-3UTR CAA 90 bp TGTGTAATAAAAGAATTATTTCGCAGATTGACTTTAAGTGTCCGTGATTCCCCCGTTGCAGTTTTATTATaGATTCCTCTGTCTGATGGA +
Preference number: 5 (lower is better)
Translates to: CVIKELFRRLTLSVRDSPVAVLL*IPLSDG
Trigger: TCCATCAGACAGAGGAATCAATAATAAAACTGCAAC...GGGGGAATCACGGACACTTAAAGTCAATCTGCGAAATAATTCTTTTATTACACA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000430049.6
ENST00000510237.5
ENST00000513432.5
ENST00000589993.5
CDS CAA 90 bp GCACCCGTGACCCTGTCCCAGGCAGCACAGTGCCTGGCTCAGGTGTaGAGGAAAGAGCTCGGTCAAGCCACATTCAGCTTAAATGTATTT +
Preference number: 6 (lower is better)
Translates to: APVTLSQAAQCLAQV*RKELGQATFSLNVF
Trigger: AAATACATTTAAGCTGAATGTGGCTTGACCGAGCTCTTTCCTCAACACCTGAGCCAGGCACTGTGCTGCCTGGGACAGGGTCACGGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513183.1
CDS CAA 90 bp AAATCAATAGGTGAGTCTTGTGCTTGTTCCAGTGGTGAAGCCCTGTaGAAGAGATCTTGGCCCTGCAAGGATTCTGTAGCTCCGGCTGGC +
Preference number: 6 (lower is better)
Translates to: KSIGESCACSSGEAL*KRSWPCKDSVAPAG
Trigger: GCCAGCCGGAGCTACAGAATCCTTGCAGGGCCAAGATCTCTTCAACAGGGCTTCACCACTGGAACAAGCACAAGACTCACCTATTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000325971.12
ENST00000506447.5
ENST00000513432.5
ENST00000589596.5
CDS CAA 90 bp CACCTTTTCACCATTAACACTAATGCTGAGGACCCCAATGCTGACTaGCAGCCAGCGGTCAGTTGGATTAAGCACACTGAGGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: HLFTINTNAEDPNAD*QPAVSWIKHTEEGL
Trigger: CAGACCCTCCTCAGTGTGCTTAATCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTCCTCAGCATTAGTGTTAATGGTGAAAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000325971.12
ENST00000506447.5
ENST00000510237.5
ENST00000511820.6
ENST00000589596.5
CDS CAA 90 bp TCACTTTTCACCATTAACACTAATGCTGAGGACCCCAATGCTGACTaGCAGCCAGCGGTCAGTTGGATTAAGCACACTGAGGAGGGTCTG +
Preference number: 6 (lower is better)
Translates to: SLFTINTNAEDPNAD*QPAVSWIKHTEEGL
Trigger: CAGACCCTCCTCAGTGTGCTTAATCCAACTGACCGCTGGCTGCAAGTCAGCATTGGGGTCCTCAGCATTAGTGTTAATGGTGAAAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585938.1
CDS CAA 72 bp GTTACCACCACCAAGGCAACCAAGAGCTTCAGATCTTaGAGCAAAGAACTCTCCATCTGTGTACCTTCTACT +
Preference number: 6 (lower is better)
Translates to: VTTTKATKSFRS*SKELSICVPST
Trigger: AGTAGAAGGTACACAGATGGAGAGTTCTTTGCTCAAAGATCTGAAGCTCTTGGTTGCCTTGGTGGTGGTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589596.5
CDS GCA 72 bp GTAATTAATTGTAGCTCCCCAGGACGTATCGCCCAGTaGAACCGAAGTATTATGAGCATCTATGTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: VINCSSPGRIAQ*NRSIMSIYVFF
Trigger: GAAGAAAACATAGATGCTCATAATACTTCGGTTGCACTGGGCGATACGTCCTGGGGAGCTACAATTAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000506447.5
ENST00000510237.5