RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP170B (Homo sapiens)

Ensembl gene IDs: ENSG00000099814

Ensembl transcript IDs: ENST00000251181.8, ENST00000414716.8, ENST00000453495.2, ENST00000556508.5

Found 1134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGTCGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTaGACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCC +
Preference number: 1 (lower is better)
Translates to: WSCAHPRQKGCHAPG*TQDLGSPPTEAHSP
Trigger: GGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACGACCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 90 bp GGGCAAGGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTaGGGGTCTTCAGGGAGAACCACCTGCGGCCAGGCAGGCGGGTGT +
Preference number: 1 (lower is better)
Translates to: GQGRGRHPPTGIWHM*GSSGRTTCGQAGGC
Trigger: ACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCCTTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 90 bp CCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACCACCTaGGGCCAGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGC +
Preference number: 1 (lower is better)
Translates to: PTGIWHMWGSSGRTT*GQAGGCAADGRQRR
Trigger: GCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 90 bp GAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTaGAGCGTGGAGGCGCCTGGACTAGCCGTGTGCATGGGAGTTGGG +
Preference number: 1 (lower is better)
Translates to: EAHSPSRGHALQSSR*SVEAPGLAVCMGVG
Trigger: CCCAACTCCCATGCACACGGCTAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 90 bp CGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATaGCAGGTTAGTGCCTGGCGGAGCCAGTCAGGCCTGGAGGGGGCA +
Preference number: 1 (lower is better)
Translates to: RPLFLCLAAGQHKGL*QVSAWRSQSGLEGA
Trigger: TGCCCCCTCCAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 90 bp TGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACG +
Preference number: 1 (lower is better)
Translates to: WPCPGPTLIPLPGRV*SSPTPVWSRWDTPT
Trigger: CGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 90 bp TGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCA +
Preference number: 1 (lower is better)
Translates to: CGAGQAASFRKPGFQ*LWSCAHPRQKGCHA
Trigger: TGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 90 bp GCCCACTTGAGGCCTGATGGCGTGAAGCCAAAAGGGGAGGGCGTGTaGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTG +
Preference number: 1 (lower is better)
Translates to: AHLRPDGVKPKGEGV*CRPSCELPETRLPV
Trigger: CACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCCTTTTGGCTTCACGCCATCAGGCCTCAAGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 90 bp GATGGCGTGAAGCCAAAAGGGGAGGGCGTGTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGC +
Preference number: 1 (lower is better)
Translates to: DGVKPKGEGVWCRPS*ELPETRLPVTLVVR
Trigger: GCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCCTTTTGGCTTCACGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 90 bp TCCCAGGAACAGGTGAGCCTGCCCACCTCCATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAG +
Preference number: 1 (lower is better)
Translates to: SQEQVSLPTSMFGTK*PHSRPLFLCLAAGQ
Trigger: CTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 90 bp CACTTGAGGCCTGATGGCGTGAAGCCAAAAGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACT +
Preference number: 1 (lower is better)
Translates to: HLRPDGVKPKGEGVW*RPSCELPETRLPVT
Trigger: AGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCCTTTTGGCTTCACGCCATCAGGCCTCAAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 90 bp CTGGTCCATACCCAGGAGGCCTCCACAGGGCAGCCCCAAGCTCAATaGGTTTGGCAACTGTGTTGGCACCAGAGGCTGGAAGCAGTGGGG +
Preference number: 1 (lower is better)
Translates to: LVHTQEASTGQPQAQ*VWQLCWHQRLEAVG
Trigger: CCCCACTGCTTCCAGCCTCTGGTGCCAACACAGTTGCCAAACCCATTGAGCTTGGGGCTGCCCTGTGGAGGCCTCCTGGGTATGGACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 90 bp CACCAGGGCAAGTGCCCTGCCATCTCAGACAGTCCCAGGAACAGGTaGGCCTGCCCACCTCCATGTTTGGCACCAAATGACCCCACAGTC +
Preference number: 1 (lower is better)
Translates to: HQGKCPAISDSPRNR*ACPPPCLAPNDPTV
Trigger: GACTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGACTGTCTGAGATGGCAGGGCACTTGCCCTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 90 bp TGTTTGGCACCAAATGACCCCACAGTCGACCTCTCTTCCTCTGCCTaGCCGCAGGCCAGCACAAAGGGTTATGGCAGGTTAGTGCCTGGC +
Preference number: 1 (lower is better)
Translates to: CLAPNDPTVDLSSSA*PQASTKGYGRLVPG
Trigger: GCCAGGCACTAACCTGCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 90 bp TTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTACAGTaGACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCA +
Preference number: 1 (lower is better)
Translates to: FSERQPQDHLRTNVQ*TLREARQTRTSSQA
Trigger: TGCCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCTGCAGTCCTCACGGTaGAGCGTGGAGGCGCCTGGA +
Preference number: 2 (lower is better)
Translates to: RALTPARRAAMHPAAPRTLQSSR*SVEAPG
Trigger: TCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCCCGCCAGAAGGGCTaGCATGCACCCGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPRQKG*HAPGCT
Trigger: GGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTCCGGCAACACGGGCTaGCCCAGCAGGGGCCACGGC +
Preference number: 2 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSGNTG*PSRGHG
Trigger: GCCGTGGCCCCTGCTGGGGCAGCCCGTGTTGCCGGA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCCCGCCAGAAGGGCTaGCATGCACCCGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPPRQKG*HAPGCT
Trigger: GGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
70% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACACGGGGACATGCCCTaGAGTCCTCACGGTGCAGCG +
Preference number: 2 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPHGDMP*SPHGAA
Trigger: CGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACCCCTCACGGGGACATaGCCTGCAGTCCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPPLTGT*PAVLTV
Trigger: CACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGAAGGGCTGCCATaGACCCGGCTGCACCCAGGA +
Preference number: 2 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPEGLP*TRLHPG
Trigger: TCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTT +
Preference number: 2 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPGEGVW*RPSCEL
Trigger: AAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGTGCTGGCTGGGAGCTaGCGAGGGGGCAAGGGCGTG +
Preference number: 2 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRVLAGS*RGGKGV
Trigger: CACGCCCTTGCCCCCTCGTCAGCTCCCAGCCAGCAC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGTGCTGGCTGGGAGCTaGCGAGGGGGCAAGGGCGTG +
Preference number: 2 (lower is better)
Translates to: STPTNHGQRALWLRGSGNVLAGS*RGGKGV
Trigger: CACGCCCTTGCCCCCTCGTCAGCTCCCAGCCAGCAC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCCAGGCAGGCGGGTGTaGGGCGGACGGAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: STPTNHGQRALWLRGSGNPGRRV*GGRKAE
Trigger: CTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCTGG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCCAGGCAGGCGGGTGTaGGGCGGACGGAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWPGRRV*GGRKAE
Trigger: CTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCTGG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCAGGCAGGCGGGTGTaGGGCGGACGGAAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPGRRV*GGRKAE
Trigger: CTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCTGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTCAGGGAGAACCACCTaGGGCCAGGCAGGCGGGTGT +
Preference number: 2 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSGRTT*GQAGGC
Trigger: ACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCGACCTCTCTTCCTCTaGCTGGCCGCAGGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPRPLFL*LAAGQH
Trigger: GTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGCCTCCAGTCCCCAGTaGCGCTCCCCCAGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAASSPQ*RSPSSW
Trigger: CCAGCTGCTGGGGGAGCGGCACTGGGGACTGGAGGC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATGGCAGGTTAGTGCCTaGCGGAGCCAGTCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPWQVSA*RSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CAA 90 bp TGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTaGGTCGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGG +
Preference number: 2 (lower is better)
Translates to: CRPSCELPETRLPVT*VVRSPPPEGLPCTR
Trigger: CCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGGGCAAGTGCCCTaGCATCTCAGACAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPGQVP*HLRQSQ
Trigger: CTGGGACTGTCTGAGATGGCAGGGCACTTGCCCTGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTGCCATGCACCCGGCTaGACCCAGGACCTTGGAAGC +
Preference number: 2 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTCHAPG*TQDLGS
Trigger: GCTTCCAAGGTCCTGGGTGCAGCCGGGTGCATGGCA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGG +
Preference number: 2 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTWCRPS*ELPETR
Trigger: CCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGAGCCTGGCCAGGAGCTaGGCCCAGAGGCCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWSLARS*AQRPVG
Trigger: CCCTACAGGCCTCTGGGCCCAGCTCCTGGCCAGGCT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACTGCACCCAGGACCTTaGAAGCCCACCTACAGAGGC +
Preference number: 2 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPLHPGP*KPTYRG
Trigger: GCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGTGCTGGCTGGGAGCTaGCGAGGGGGCAAGGGCGTG +
Preference number: 2 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGVLAGS*RGGKGV
Trigger: CACGCCCTTGCCCCCTCGTCAGCTCCCAGCCAGCAC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCAC +
Preference number: 2 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPKPGFQ*LWSCAH
Trigger: GTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTT...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACCTGGAGGGGGCACCTaGAATGGCACCAACAACTCT +
Preference number: 2 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPPGGGT*NGTNNS
Trigger: AGAGTTGTTGGTGCCATTGCAGGTGCCCCCTCCAGG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCGACCTCTCTTCCTCTaGCTGGCCGCAGGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: AAARWTGLAPPPYRQQALRPLFL*LAAGQH
Trigger: GTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTGCAGTCCTCACGGTaGAGCGTGGAGGCGCCTGGA +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALQSSR*SVEAPG
Trigger: TCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCCCTCACGGGGACATaGCCTGCAGTCCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPLTGT*PAVLTV
Trigger: CACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCAGCCTGGCCAGGAGCTaGGCCCAGAGGCCTGTAGGG +
Preference number: 2 (lower is better)
Translates to: SCELPETRLPVTLVVRSPSLARS*AQRPVG
Trigger: CCCTACAGGCCTCTGGGCCCAGCTCCTGGCCAGGCT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCAGCGTGGAGGCGCCTaGACTAGCCGTGTGCATGGG +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAQRGGA*TSRVHG
Trigger: CCCATGCACACGGCTAGTCCAGGCGCCTCCACGCTG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGGCCAACGGGCTCTTTaGCTTAGAGGCTCCGGCAAC +
Preference number: 2 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPGQRAL*LRGSGN
Trigger: GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGATGCCCTTGAGGGCTTaGCCTTGGCAGCAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWMPLRA*PWQQPG
Trigger: GCCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCAT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTGCCCACTTGAGGCCTaGTGGCGTGAAGCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTCPLEA*WREAKR
Trigger: CCTTTTGGCTTCACGCCATCAGGCCTCAAGTGGGCA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCCCTCACGGGGACATaGCCTGCAGTCCTCACGGTG +
Preference number: 2 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPLTGT*PAVLTV
Trigger: CACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGG +
Preference number: 2 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWWCRPS*ELPETR
Trigger: CCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAAGAGGCACCAAGCTCTaGTCACCTGCCATGTTCCCA +
Preference number: 2 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPRGTKL*SPAMFP
Trigger: TGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCT...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGGAGCCAGTCAGGCCTaGAGGGGGCACCTGCAATGG +
Preference number: 2 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSGASQA*RGHLQW
Trigger: CCATTGCAGGTGCCCCCTCCAGGCCTGACTGGCTCC...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGGAGCCAGTCAGGCCTaGAGGGGGCACCTGCAATGG +
Preference number: 2 (lower is better)
Translates to: AKLRASGNPASSDFGRALGASQA*RGHLQW
Trigger: CCATTGCAGGTGCCCCCTCCAGGCCTGACTGGCTCC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGGCAGGTTAGTGCCTaGCGGAGCCAGTCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWWQVSA*RSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACTCTCTTCCTCTGCCTaGCCGCAGGCCAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLLSSSA*PQASTK
Trigger: CTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCCACCTCCATGTTTaGCACCAAATGACCCCACAG +
Preference number: 2 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPAHLHV*HQMTPQ
Trigger: CTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACGTGTGCATGGGAGTTaGGGGGTGTCTGCACCTGTG +
Preference number: 2 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLRVHGS*GVSAPV
Trigger: CACAGGTGCAGACACCCCCCAACTCCCATGCACACG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCAGCGTGGAGGCGCCTaGACTAGCCGTGTGCATGGG +
Preference number: 2 (lower is better)
Translates to: AKLRASGNPASSDFGRALQRGGA*TSRVHG
Trigger: CCCATGCACACGGCTAGTCCAGGCGCCTCCACGCTG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAATGCCCTTGAGGGCTTaGCCTTGGCAGCAGCCTGGC +
Preference number: 2 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSMPLRA*PWQQPG
Trigger: GCCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCAT...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCGACCTCTCTTCCTCTaGCTGGCCGCAGGCCAGCAC +
Preference number: 2 (lower is better)
Translates to: VWCRPSCELPETRLPVTLRPLFL*LAAGQH
Trigger: GTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCCAGGGCAAGTGCCCTaGCATCTCAGACAGTCCCAG +
Preference number: 2 (lower is better)
Translates to: AAARWTGLAPPPYRQQALPGQVP*HLRQSQ
Trigger: CTGGGACTGTCTGAGATGGCAGGGCACTTGCCCTGG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCCCCGCCAGAAGGGCTaGCATGCACCCGGCTGCACC +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRPRQKG*HAPGCT
Trigger: GGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGCCGCCCACAGGGATATaGCACATGTGGGGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGPPTGI*HMWGSS
Trigger: TGAAGACCCCCACATGTGCCATATCCCTGTGGGCGG...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTCTCTTCCTCTGCCTaGCCGCAGGCCAGCACAAAG +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALSSSA*PQASTK
Trigger: CTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCAC +
Preference number: 2 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRKPGFQ*LWSCAH
Trigger: GTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTTGCCCACTTGAGGCCTaGTGGCGTGAAGCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: AAARWTGLAPPPYRQQALCPLEA*WREAKR
Trigger: CCTTTTGGCTTCACGCCATCAGGCCTCAAGTGGGCA...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCCGCCCACAGGGATATaGCACATGTGGGGGTCTTCA +
Preference number: 2 (lower is better)
Translates to: STPTNHGQRALWLRGSGNPPTGI*HMWGSS
Trigger: TGAAGACCCCCACATGTGCCATATCCCTGTGGGCGG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCAGGGGGCACCTGCAATaGCACCAACAACTCTTTCCT +
Preference number: 2 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPRGHLQ*HQQLFP
Trigger: AGGAAAGAGTTGTTGGTGCCATTGCAGGTGCCCCCT...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTCTCAACAAGCCCCTaGTCCATACCCAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALSTSP*SIPRRP
Trigger: AGGCCTCCTGGGTATGGACCAGGGGCTTGTTGAGAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTCAGGGAGAACCACCTaGGGCCAGGCAGGCGGGTGT +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRSGRTT*GQAGGC
Trigger: ACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACCTGGAGGGGGCACCTaGAATGGCACCAACAACTCT +
Preference number: 2 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSPGGGT*NGTNNS
Trigger: AGAGTTGTTGGTGCCATTGCAGGTGCCCCCTCCAGG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTT +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGEGVW*RPSCEL
Trigger: AAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTAGAGGCACCAAGCTCTaGTCACCTGCCATGTTCCCA +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSARGTKL*SPAMFP
Trigger: TGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCT...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCAGCACAAAGGGTTATaGCAGGTTAGTGCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: STPTNHGQRALWLRGSGNQHKGL*QVSAWR
Trigger: CCGCCAGGCACTAACCTGCCATAACCCTTTGTGCTG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CAA 90 bp AAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTaGACCTTGGCAGCAGCCTGGCCAGGAGCTGGGCCCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: KITVMKRRRGNALEG*TLAAAWPGAGPRGL
Trigger: CAGGCCTCTGGGCCCAGCTCCTGGCCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTC +
Preference number: 2 (lower is better)
Translates to: STPTNHGQRALWLRGSGNMFGTK*PHSRPL
Trigger: GAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACAT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTC +
Preference number: 2 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAMFGTK*PHSRPL
Trigger: GAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACAT...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCAGCACAAAGGGTTATaGCAGGTTAGTGCCTGGCGG +
Preference number: 2 (lower is better)
Translates to: SCELPETRLPVTLVVRSPQHKGL*QVSAWR
Trigger: CCGCCAGGCACTAACCTGCCATAACCCTTTGTGCTG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTC +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRLPGRV*SSPTPV
Trigger: GACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGAGTCCCAGGAACAGGTaGGCCTGCCCACCTCCATGT +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRSPRNR*ACPPPC
Trigger: ACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGACT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCAAGCTCAATGGGTTTaGCAACTGTGTTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: AAARWTGLAPPPYRQQALQAQWV*QLCWHQ
Trigger: CTGGTGCCAACACAGTTGCCAAACCCATTGAGCTTG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGCCAACGGGCTCTTTaGCTTAGAGGCTCCGGCAAC +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGQRAL*LRGSGN
Trigger: GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCAGCCCCAAGCTCAATaGGTTTGGCAACTGTGTTGG +
Preference number: 2 (lower is better)
Translates to: VWCRPSCELPETRLPVTLQPQAQ*VWQLCW
Trigger: CCAACACAGTTGCCAAACCCATTGAGCTTGGGGCTG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCAGCCCCAAGCTCAATaGGTTTGGCAACTGTGTTGG +
Preference number: 2 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRQPQAQ*VWQLCW
Trigger: CCAACACAGTTGCCAAACCCATTGAGCTTGGGGCTG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGGCGGGGTGGGCAACTaGGGCATGCAGGGGTGGGCA +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECGGVGN*GMQGWA
Trigger: TGCCCACCCCTGCATGCCCCAGTTGCCCACCCCGCC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGGAGCCAGTCAGGCCTaGAGGGGGCACCTGCAATGG +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECGASQA*RGHLQW
Trigger: CCATTGCAGGTGCCCCCTCCAGGCCTGACTGGCTCC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTGGCAGGTTAGTGCCTaGCGGAGCCAGTCAGGCCTG +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECWQVSA*RSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTC +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECLPGRV*SSPTPV
Trigger: GACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTAGTCCCAGGAACAGGTaGGCCTGCCCACCTCCATGT +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECSPRNR*ACPPPC
Trigger: ACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGACT...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCTGCACCCAGGACCTTaGAAGCCCACCTACAGAGGC +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECLHPGP*KPTYRG
Trigger: GCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTGCCCACTTGAGGCCTaGTGGCGTGAAGCCAAAAGG +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECCPLEA*WREAKR
Trigger: CCTTTTGGCTTCACGCCATCAGGCCTCAAGTGGGCA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCTCTCAACAAGCCCCTaGTCCATACCCAGGAGGCCT +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECLSTSP*SIPRRP
Trigger: AGGCCTCCTGGGTATGGACCAGGGGCTTGTTGAGAG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCAAGCTCAATGGGTTTaGCAACTGTGTTGGCACCAG +
Preference number: 2 (lower is better)
Translates to: YKITIFRKTATRPPENECQAQWV*QLCWHQ
Trigger: CTGGTGCCAACACAGTTGCCAAACCCATTGAGCTTG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 72 bp GCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTaGACCCAGGACCTTGGAAGCCCACCTACAGAGGCC +
Preference number: 3 (lower is better)
Translates to: AHPRQKGCHAPG*TQDLGSPPTEA
Trigger: GGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 72 bp AGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTaGAGCGTGGAGGCGCCTGGACTAGCCGTGTGCATG +
Preference number: 3 (lower is better)
Translates to: SPSRGHALQSSR*SVEAPGLAVCM
Trigger: CATGCACACGGCTAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 72 bp CTACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTaGAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGAC +
Preference number: 3 (lower is better)
Translates to: LQRPIAPHGDMP*SPHGAAWRRLD
Trigger: GTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGTAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp ACGTCCACCCCCACCAACCACGGCCAACGGGCTCTTTaGCTTAGAGGCTCCGGCAACACGGGCTGCCCCAGC +
Preference number: 3 (lower is better)
Translates to: TSTPTNHGQRAL*LRGSGNTGCPS
Trigger: GCTGGGGCAGCCCGTGTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGACGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGCTGCACCCAGGACCTaGGAAGCCCACCTACAGAGG +
Preference number: 3 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTAAPRT*EAHLQR
Trigger: CCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 72 bp GGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCACCCCCGCCAGAAGGGC +
Preference number: 3 (lower is better)
Translates to: GQAASFRKPGFQ*LWSCAHPRQKG
Trigger: GCCCTTCTGGCGGGGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 72 bp CACAGCCACTGCCGAGGGGTGGGAAGGAGCCGTGGATaGAGCGTGACCACTTCATGTCCAGGGGCAGGCGGG +
Preference number: 3 (lower is better)
Translates to: HSHCRGVGRSRG*SVTTSCPGAGG
Trigger: CCCGCCTGCCCCTGGACATGAAGTGGTCACGCTTCATCCACGGCTCCTTCCCACCCCTCGGCAGTGGCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 72 bp ATATGGCACATGTGGGGGTCTTCAGGGAGAACCACCTaGGGCCAGGCAGGCGGGTGTGCGGCGGACGGAAGG +
Preference number: 3 (lower is better)
Translates to: IWHMWGSSGRTT*GQAGGCAADGR
Trigger: CCTTCCGTCCGCCGCACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGAAGACCCCCACATGTGCCATAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp CGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTaGGGGTCTTCAGGGAGAACCACCTGCGGCCAGGCA +
Preference number: 3 (lower is better)
Translates to: RGRHPPTGIWHM*GSSGRTTCGQA
Trigger: TGCCTGGCCGCAGGTGGTTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp GGGCAAGGGCGTGGGAGGCACCCGCCCACAGGGATATaGCACATGTGGGGGTCTTCAGGGAGAACCACCTGC +
Preference number: 3 (lower is better)
Translates to: GQGRGRHPPTGI*HMWGSSGRTTC
Trigger: GCAGGTGGTTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCCTTGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp GCACCTGTGTGCATGGCTCAGCTCTCAACAAGCCCCTaGTCCATACCCAGGAGGCCTCCACAGGGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: APVCMAQLSTSP*SIPRRPPQGSP
Trigger: GGGGCTGCCCTGTGGAGGCCTCCTGGGTATGGACCAGGGGCTTGTTGAGAGCTGAGCCATGCACACAGGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp AGGCCTGATGGCGTGAAGCCAAAAGGGGAGGGCGTGTaGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGG +
Preference number: 3 (lower is better)
Translates to: RPDGVKPKGEGV*CRPSCELPETR
Trigger: CCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCCTTTTGGCTTCACGCCATCAGGCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGCCCCCATGCCCACTaGAGGCCTGATGGCGTGAAG +
Preference number: 3 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSACPHAH*RPDGVK
Trigger: CTTCACGCCATCAGGCCTCAAGTGGGCATGGGGGCA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 72 bp CCTGATGGCGTGAAGCCAAAAGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTT +
Preference number: 3 (lower is better)
Translates to: PDGVKPKGEGVW*RPSCELPETRL
Trigger: AAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCCTTTTGGCTTCACGCCATCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp TTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATaGCAGGTTAGTGCCTGGCGGAGCCAGTCAGGCCTG +
Preference number: 3 (lower is better)
Translates to: FLCLAAGQHKGL*QVSAWRSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp CCAGGTCCGACTCTCATACCATTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGAC +
Preference number: 3 (lower is better)
Translates to: PGPTLIPLPGRV*SSPTPVWSRWD
Trigger: GTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAATGGTATGAGAGTCGGACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGAATGCCCTTGAGGGCTaGACCTTGGCAGCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWNALEG*TLAAAW
Trigger: CCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCATT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGCACCCAGGACCTaGGAAGCCCACCTACAGAGG +
Preference number: 3 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSAAPRT*EAHLQR
Trigger: CCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTGCCCACCTCCATGTTaGGCACCAAATGACCCCACA +
Preference number: 3 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSCPPPC*APNDPT
Trigger: TGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGCA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp ATTGCACAGCCACTGCCGAGGGGTGGGAAGGAGCCGTaGATGAAGCGTGACCACTTCATGTCCAGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: IAQPLPRGGKEP*MKRDHFMSRGR
Trigger: CCTGCCCCTGGACATGAAGTGGTCACGCTTCATCCACGGCTCCTTCCCACCCCTCGGCAGTGGCTGTGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAATGCCCTTGAGGGCTaGACCTTGGCAGCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGNALEG*TLAAAW
Trigger: CCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCATT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACCAAGCTCAATGGGTTaGGCAACTGTGTTGGCACCA +
Preference number: 3 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLPSSMG*ATVLAP
Trigger: TGGTGCCAACACAGTTGCCAAACCCATTGAGCTTGG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 72 bp CAGGTGAGCCTGCCCACCTCCATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTCTTCCTCTGCCTGGCC +
Preference number: 3 (lower is better)
Translates to: QVSLPTSMFGTK*PHSRPLFLCLA
Trigger: GGCCAGGCAGAGGAAGAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGCAGGCTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR GCA 72 bp AAGCCAAAAGGGGAGGGCGTGTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTG +
Preference number: 3 (lower is better)
Translates to: KPKGEGVWCRPS*ELPETRLPVTL
Trigger: CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCCTTTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp TATGGCAGGTTAGTGCCTGGCGGAGCCAGTCAGGCCTaGAGGGGGCACCTGCAATGGCACCAACAACTCTTT +
Preference number: 3 (lower is better)
Translates to: YGRLVPGGASQA*RGHLQWHQQLF
Trigger: AAAGAGTTGTTGGTGCCATTGCAGGTGCCCCCTCCAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR CCA 72 bp CCAAATGACCCCACAGTCGACCTCTCTTCCTCTGCCTaGCCGCAGGCCAGCACAAAGGGTTATGGCAGGTTA +
Preference number: 3 (lower is better)
Translates to: PNDPTVDLSSSA*PQASTKGYGRL
Trigger: TAACCTGCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGTGGGGTCATTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 72 bp AGACAGCCACAAGACCACCTGAGAACGAATGTACAGTaGACCCTCCGAGAAGCCCGGCAAACAAGGACCAGT +
Preference number: 3 (lower is better)
Translates to: RQPQDHLRTNVQ*TLREARQTRTS
Trigger: ACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCGTTCTCAGGTGGTCTTGTGGCTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR TCA 72 bp AATAACCATTTTCCGAAAGACAGCCACAAGACCACCTaGGAACGAATGTACAGTGAACCCTCCGAGAAGCCC +
Preference number: 3 (lower is better)
Translates to: NNHFPKDSHKTT*ERMYSEPSEKP
Trigger: GGGCTTCTCGGAGGGTTCACTGTACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
3UTR-3UTR CAA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCCAAGCTCAATGGGTTaGGCAACTGTGTTGGCACCA +
Preference number: 3 (lower is better)
Translates to: YKITIFRKTATRPPENECPSSMG*ATVLAP
Trigger: TGGTGCCAACACAGTTGCCAAACCCATTGAGCTTGG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTCCGGCAACACGGGCTaGCCCAGCAGGGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREASGNTG*PSRGHG
Trigger: GCCGTGGCCCCTGCTGGGGCAGCCCGTGTTGCCGGA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCCTATCGGCCGGCGTTaGGCCACGGCGCTTGTCGGC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTPIGRR*ATALVG
Trigger: GCCGACAAGCGCCGTGGCCCAACGCCGGCCGATAGG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCCAGGCAGGCGGGTGTaGGGCGGACGGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGPGRRV*GGRKAE
Trigger: CTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCTGG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGGGGGCTGCGACGGCTaGGGGGTCTCCTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPGGCDG*GVSFVG
Trigger: CCCCACGAAGGAGACCCCGCAGCCGTCGCAGCCCCC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCGTGGAAGTCCATGCGTaGGGCCCGGGTAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTVEVHA*GPGSGQ
Trigger: CTGGCCGCTACCCGGGCCGCACGCATGGACTTCCAC...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGCCTCCCGGGTCCTGTaGAGCTGGCGGGGATGGCGA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAASRVL*SWRGWR
Trigger: TCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGGTGCGGGCAGGGGCTaGCTCGGGGTCACTAGTCCC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAGAGRG*LGVTSP
Trigger: GGGACTAGTGACCCCGAGGCAGCCCCTGCCCGCACC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCCCGCCAGAAGGGCTaGCATGCACCCGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPRQKG*HAPGCT
Trigger: GGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCCATCTCGCCAGGTGTaGCCTCCTTGCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGPSRQV*PPCPGA
Trigger: GGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTGCCTGGACTGGGGCTaGGACACTGGGGCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTCLDWG*DTGAVP
Trigger: AGGGACCGCCCCAGTGTCCCAGCCCCAGTCCAGGCA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCCCCTGCCTGGACTaGGGCTGGGACACTGGGGCG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPAPCLD*GWDTGA
Trigger: CGCCCCAGTGTCCCAGCCCCAGTCCAGGCAGGGGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGCCCCCTGCCTGGACTaGGGCTGGGACACTGGGGCG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPAPCLD*GWDTGA
Trigger: CGCCCCAGTGTCCCAGCCCCAGTCCAGGCAGGGGGC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCACGTGGGCCCCTCCTaGGGGCTCCTGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGHVGPS*GLLRLL
Trigger: CAGCAGACGCAGGAGCCCCCAGGAGGGGCCCACGTG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGACGCCATCCCGTGCTaGGGGGCTGGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGDAIPC*GAGLGC
Trigger: ACAGCCCAGCCCAGCCCCCCAGCACGGGATGGCGTC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCTGGGGGTCCCGCTTaGTCTGCCTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPGGPA*SASAAA
Trigger: TGCGGCTGCAGAGGCAGATCAAGCGGGACCCCCAGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCTCTCACTGGGCAGCTaGGGGAGCCGTCGCCGCATG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREALSLGS*GSRRRM
Trigger: CATGCGGCGACGGCTCCCTCAGCTGCCCAGTGAGAG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACGCAGCCTCAGTGTCTaGAGCGTCCCCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPRSLSV*SVPQPG
Trigger: GCCCGGCTGGGGGACGCTTCAGACACTGAGGCTGCG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTGCTGGGCATGTTGCTaGGGGAGGCGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTCWACC*GRRCGQ
Trigger: CTGCCCACAGCGCCTCCCTCAGCAACATGCCCAGCA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGTGCTGGCTGGGAGCTaGCGAGGGGGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPVLAGS*RGGKGV
Trigger: CACGCCCTTGCCCCCTCGTCAGCTCCCAGCCAGCAC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGGGGGCTGCGACGGCTaGGGGGTCTCCTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPGGCDG*GVSFVG
Trigger: CCCCACGAAGGAGACCCCGCAGCCGTCGCAGCCCCC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCCACTCCTCCTGCTaGTCTCTGGGCCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPAHSSC*SLGPQG
Trigger: GCCCTGCGGGCCCAGAGAGCAGCAGGAGGAGTGGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCTGGGCTGGGCTGTCTaGCCTAGGCCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREALGWAV*PRPSPS
Trigger: GGATGGGGAGGGCCTAGGGCAGACAGCCCAGCCCAG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCTGGGCTGGGCTGTCTaGCCTAGGCCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGLGWAV*PRPSPS
Trigger: GGATGGGGAGGGCCTAGGGCAGACAGCCCAGCCCAG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGTGGAAGTCCATGCGTaGGGCCCGGGTAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAVEVHA*GPGSGQ
Trigger: CTGGCCGCTACCCGGGCCGCACGCATGGACTTCCAC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCTCCCGGGTCCTGTaGAGCTGGCGGGGATGGCGA +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPASRVL*SWRGWR
Trigger: TCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACCACGGGCTCAGGGTTaGCCAGGGACCCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPPRAQG*PGTPAH
Trigger: GTGAGCGGGGGTCCCTGGGCAACCCTGAGCCCGTGG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGAGCCCGGCTGGAGCTaGCAGCCCTCGGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPEPGWS*QPSGSE
Trigger: CTCAGACCCCGAGGGCTGGCAGCTCCAGCCGGGCTC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTCCGGCAACACGGGCTaGCCCAGCAGGGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGSGNTG*PSRGHG
Trigger: GCCGTGGCCCCTGCTGGGGCAGCCCGTGTTGCCGGA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGCCTCCAGTCCCCAGTaGCGCTCCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPASSPQ*RSPSSW
Trigger: CCAGCTGCTGGGGGAGCGGCACTGGGGACTGGAGGC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCCGTCCTGCTGCACTaGTCCCTTGGGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPVLLH*SLGALW
Trigger: CCAGAGCGCCCCAAGGGACCAGTGCAGCAGGACGGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACGGCCGAGGCCGCCTTaGCCAGGGGGTCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPRPRPP*PGGPLS
Trigger: ACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGACGCCATCCCGTGCTaGGGGGCTGGGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPDAIPC*GAGLGC
Trigger: ACAGCCCAGCCCAGCCCCCCAGCACGGGATGGCGTC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTCTGAGCTGGGTAGGTaGGCGAGGACAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTSELGR*ARTGPR
Trigger: GCGTGGCCCTGTCCTCGCCCACCTACCCAGCTCAGA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGTGTGGGGCGAGGGGTaGACAGGCTGTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGVWGEG*TGCWSG
Trigger: CCCGCTCCAACAGCCTGTCCACCCCTCGCCCCACAC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGTGTGGGGCGAGGGGTaGACAGGCTGTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAVWGEG*TGCWSG
Trigger: CCCGCTCCAACAGCCTGTCCACCCCTCGCCCCACAC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGGCCTGCTCAGCAGCTaGCCGGCCCACGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTGLLSS*PAHGLR
Trigger: CCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCCGCTTCCGGGGCATaGCCAGGATGTCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPASGA*PGCPGV
Trigger: CACGCCTGGACATCCTGGCCATGCCCCGGAAGCGGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGGCGGGGACCCGTGGTaGTGGCTGTGTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGGGDPW*WLCWQP
Trigger: AGGCTGCCAACACAGCCACCACCACGGGTCCCCGCC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCCTGCTGAAGGGCTaGCGGGGACCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPALLKG*RGPVVV
Trigger: CACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGGGAACGAGCCCGGCTaGAGCTGCCAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTGNEPG*SCQPSG
Trigger: CCCCGAGGGCTGGCAGCTCCAGCCGGGCTCGTTCCC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCTCCCGGGCAGAGATaGTCGAGGCGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPPGQR*SRRGCW
Trigger: CCAGCACCCCCGCCTCGACCATCTCTGCCCGGGAGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCGGGACACCCACTTCTaGCCCCCAGGGGAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSRDTHF*PPGEPG
Trigger: GCCGGGCTCCCCTGGGGGTCAGAAGTGGGTGTCCCG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCCCGGGGGCCCTTGGTaGGCGCCGACCCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNPGGPW*APTPAP
Trigger: TGGAGCAGGGGTCGGCGCTCACCAAGGGCCCCCGGG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTGCCACTACGCAGGCTaGCGGTGCTGGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTCHYAG*RCWLCP
Trigger: TGGACACAGCCAGCACCGTCAGCCTGCGTAGTGGCA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCACTGCTCACGGGCACTaGCCAGGGCGGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPTAHGH*PGRCLP
Trigger: CGGGAGGCACCGCCCTGGTCAGTGCCCGTGAGCAGT...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGCCACGCCTTATGGCTaGGCGCCGTACCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPATPYG*APYRLS
Trigger: GGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCTGAGCGGGCCCTGCTaGAGGGCTGGCGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWLSGPC*RAGGDP
Trigger: CGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCGCACCTTCTGGAAGTTaGGGCTGGCCTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTAPSGS*GWPRGC
Trigger: GCATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGC...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTCCTCCGGGACTCGGTaGTGCACACGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTSSGTR*CTRSST
Trigger: TGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGAGGA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGGGGGCTGCGACGGCTaGGGGGTCTCCTTCGTGGGG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSGGCDG*GVSFVG
Trigger: CCCCACGAAGGAGACCCCGCAGCCGTCGCAGCCCCC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCCAGGGCCAACCCGGTaGAGCAGGCTCGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGPGPTR*SRLGSF
Trigger: GAATGACCCGAGCCTGCTGCACCGGGTTGGCCCTGG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATCCCCGGACGGGCTGTaGGTGAAGGACTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPSPDGL*VKDWER
Trigger: GCGCTCCCAGTCCTTCACGCACAGCCCGTCCGGGGA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGCCTCCCGGGTCCTGTaGAGCTGGCGGGGATGGCGA +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPASRVL*SWRGWR
Trigger: TCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGAGCGGGTCAAGGCCTaGGGCCCCTTCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPERVKA*GPFWEL
Trigger: CAGCTCCCAGAAGGGGCCGCAGGCCTTGACCCGCTC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGCCTCGGGGATGCGCTaGACCAGCTCCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPASGMR*TSSSRA
Trigger: TGCCCGGGAGGAGCTGGTGCAGCGCATCCCCGAGGC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCGACCTCTCTTCCTCTaGCTGGCCGCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGRPLFL*LAAGQH
Trigger: GTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCAGAAGGGCTGCCATaGACCCGGCTGCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPEGLP*TRLHPG
Trigger: TCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTWCRPS*ELPETR
Trigger: CCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGGTGAGGGTGGGCTCTaGGCAGCCACGCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPGEGGL*AATRPF
Trigger: GAAGGGCCGCGTGGCTGCCCAGAGCCCACCCTCACC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCTGGCTGGGCCCGTCTaGCCCTGCTGTTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPLAGPV*PCCSGS
Trigger: CGAGCCCGAACAGCAGGGCCAGACGGGCCCAGCCAG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCGGCTGCCTCTGTTCCTaGTCTCCGGTCCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTGCLCS*SPVPLL
Trigger: GAGAAGGGGGACCGGAGACCAGGAACAGAGGCAGCC...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATCCCTTGGGGCGCTCTaGGTAGGGCTCTCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPSLGAL*VGLSLA
Trigger: CGCCAGGGAGAGCCCTACCCAGAGCGCCCCAAGGGA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAGGGGCGCGGAAGCCGTaGAGCTCCCCGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLGARKP*SSPSCC
Trigger: GCAGCAGGACGGGGAGCTCCACGGCTTCCGCGCCCC...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCGGGGGCCGCCGCTaGCGCAGGGAAAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTPGGRR*RRENLV
Trigger: CACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTCGCTCTTGGTGCTGTaGCGGTCATCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTSLLVL*RSSPGP
Trigger: TGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGCACCTGCTCCCCGCTaGCCTCCAAGGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGAPAPR*PPRAPQ
Trigger: CTGGGGTGCCCTTGGAGGCCAGCGGGGAGCAGGTGC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGCACCTGCTCCCCGCTaGCCTCCAAGGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTAPAPR*PPRAPQ
Trigger: CTGGGGTGCCCTTGGAGGCCAGCGGGGAGCAGGTGC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGCGCTTGTCGGCCTTaGGGTCCCCGGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGACRP*GPRTGC
Trigger: ACAGCCCGTCCGGGGACCCCAAGGCCGACAAGCGCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATGCCTGGACTGGGGCTaGGACACTGGGGCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPCLDWG*DTGAVP
Trigger: AGGGACCGCCCCAGTGTCCCAGCCCCAGTCCAGGCA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCCTGTTTCCGTGCCTTaGTCAGCTGGGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTPVSVP*SAGGPW
Trigger: CCACGGACCCCCAGCTGACCAAGGCACGGAAACAGG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCACGTGGGCCCCTCCTaGGGGCTCCTGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGHVGPS*GLLRLL
Trigger: CAGCAGACGCAGGAGCCCCCAGGAGGGGCCCACGTG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGAAAGAGGCGGGAGTTaGCTCCCCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPERGGS*LPGGPW
Trigger: CCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGGGGCTTGCCGGGCGCTaGGGGACCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGGLAGR*GTTGWL
Trigger: GAGCCAGCCAGTGGTCCCCCAGCGCCCGGCAAGCCC...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGGGCTTGCCGGGCGCTaGGGGACCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSGLAGR*GTTGWL
Trigger: GAGCCAGCCAGTGGTCCCCCAGCGCCCGGCAAGCCC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGGGTGGACAGGCTGTTaGAGCGGGTCAAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAGWTGC*SGSRPA
Trigger: CGCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCGGCGTGACAGCTTCTTaGCCTGCTCAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTGVTAS*PAQQLA
Trigger: GGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCC...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGTGCTTCGGCCATGGTaGGCTTGCGGCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGVLRPW*ACGWHS
Trigger: GCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCAC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCCGTGCTTCGGCCATaGTGGGCTTGCGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPVLRP*WACGWH
Trigger: GTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGCCCTGCTGAAGGGCTaGCGGGGACCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGALLKG*RGPVVV
Trigger: CACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGGAGCCAGTCAGGCCTaGAGGGGGCACCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGGASQA*RGHLQW
Trigger: CCATTGCAGGTGCCCCCTCCAGGCCTGACTGGCTCC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTCACCCACGCCAGTCTaGTCCAGGTGGGACACCCCC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREASPTPV*SRWDTP
Trigger: GGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATGGGCAGCAGCCCGGTaGACCGGGCTAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPWAAAR*TGLAPP
Trigger: AGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGCCCA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGCGGGGTGGGCAACTaGGGCATGCAGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGGVGN*GMQGWA
Trigger: TGCCCACCCCTGCATGCCCCAGTTGCCCACCCCGCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACCCGTCCTGCTGCACTaGTCCCTTGGGGCGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPPVLLH*SLGALC
Trigger: GCAGAGCGCCCCAAGGGACCAGTGCAGCAGGACGGG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000453495.2
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCACGCCCCACGAAGATaGGCTCCCGAGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGHAPRR*APEGAG
Trigger: ACCGGCTCCCTCGGGAGCTCATCTTCGTGGGGCGTG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGCCAGGGGGTCCTCTaGGTCACTCTGCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGQGVL*VTLRAV
Trigger: GACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCGGGACACCCACTTCTaGCCCCCAGGGGAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWRDTHF*PPGEPG
Trigger: GCCGGGCTCCCCTGGGGGTCAGAAGTGGGTGTCCCG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTGCCACTACGCAGGCTaGCGGTGCTGGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREACHYAG*RCWLCP
Trigger: TGGACACAGCCAGCACCGTCAGCCTGCGTAGTGGCA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACTGAGCGGGCCCTGCTaGAGGGCTGGCGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGELSGPC*RAGGDP
Trigger: CGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCGCCGTGGATGAAGCGTaGCCACTTCATGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTAVDEA*PLHVQG
Trigger: CCCCTGGACATGAAGTGGTCACGCTTCATCCACGGC...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCAGGCAGGCGGGTGTaGGGCGGACGGAAGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPGRRV*GGRKAE
Trigger: CTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCTGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTGGCACTCATCTTGGTaGTGGCTGGGCCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAWHSSW*WLGPSG
Trigger: GCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGCTCCCCGTCCTGCTaGACTGGTCCCTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGSSPSC*TGPLGR
Trigger: GCGCCCCAAGGGACCAGTGCAGCAGGACGGGGAGCT...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCAGCTCCCCGTCCTGCTaGACTGGTCCCTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSSPSC*TGPLGR
Trigger: GCGCCCCAAGGGACCAGTGCAGCAGGACGGGGAGCT...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCGCTCCGCCCCCACCTaGCTCTGCATCCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGRSAPT*LCILRG
Trigger: CCCACGAAGGATGCAGAGGCAGGTGGGGGCGGAGCG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCAGGCTCGGGTCATTCTaGACCAGCCAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGRLGSF*TSQSAT
Trigger: GGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCT...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGCGTGCCGTCCTCGTaGTTGTGGCCCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGCVPSS*LWPFRV
Trigger: CACCCTGAAGGGCCACAAGCACGAGGACGGCACGCA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACGCTTGATCTGCCTCTaGAGCCGCACCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPRLICL*SRTCSP
Trigger: CGGGGAGCAGGTGCGGCTGCAGAGGCAGATCAAGCG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCGAGCTGCGGCCCCCTaGCTGGACTGGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALRAAAP*LDWGWD
Trigger: GTCCCAGCCCCAGTCCAGGCAGGGGGCCGCAGCTCG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGTGGAAGTCCATGCGTaGGGCCCGGGTAGCGGCCAG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTVEVHA*GPGSGQ
Trigger: CTGGCCGCTACCCGGGCCGCACGCATGGACTTCCAC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGCTGAGCTACGGCTCTaGTCCTCCCGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTAELRL*SSRAAG
Trigger: CCCAGCTGCCCGGGAGGAGCAGAGCCGTAGCTCAGC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACGACCTCTCTTCCTCTaGCTGGCCGCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPRPLFL*LAAGQH
Trigger: GTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGWCRPS*ELPETR
Trigger: CCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGGGAGGCCCACAGCTaGCCCGCTGTGGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGWEAHS*PAVGNS
Trigger: GGAATTTCCCACAGCGGGCCAGCTGTGGGCCTCCCA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTGGCCTGGCCAGGTCTaGGGCCTAGATCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTWPGQV*GLDQEP
Trigger: AGGTTCCTGATCTAGGCCCCAGACCTGGCCAGGCCA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGGCTCTCCCTGGCGCTaGGCGTCAGGCAGCGTGCTA +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTGSPWR*ASGSVL
Trigger: TAGCACGCTGCCTGACGCCCAGCGCCAGGGAGAGCC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCTGCACTGGTCCCTTaGGGCGCTCTGGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPAALVP*GALGRA
Trigger: AGCCCTACCCAGAGCGCCCCAAGGGACCAGTGCAGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCCGTCCTGCTGCACTaGTCCCTTGGGGCGCTCTGG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPPVLLH*SLGALW
Trigger: CCAGAGCGCCCCAAGGGACCAGTGCAGCAGGACGGG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGGGGCGCGGAAGCCGTaGAGCTCCCCGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAGARKP*SSPSCC
Trigger: GCAGCAGGACGGGGAGCTCCACGGCTTCCGCGCCCC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGGGGCGCGGAAGCCGTaGAGCTCCCCGTCCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRGARKP*SSPSCC
Trigger: GCAGCAGGACGGGGAGCTCCACGGCTTCCGCGCCCC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCCGGGGGCCGCCGCTaGCGCAGGGAAAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPGGRR*RRENLV
Trigger: CACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCATCTCGCCAGGTGTaGCCTCCTTGCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPSRQV*PPCPGA
Trigger: GGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCGCTCTTGGTGCTGTaGCGGTCATCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGSLLVL*RSSPGP
Trigger: TGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACGGCCGAGGCCGCCTTaGCCAGGGGGTCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLRPRPP*PGGPLS
Trigger: ACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACTGGGGCTGGGACACTaGGGCGGTCCCTATCGGCCG +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLLGLGH*GGPYRP
Trigger: CGGCCGATAGGGACCGCCCCAGTGTCCCAGCCCCAG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCGTGCCTTGGTCAGCTaGGGGTCCGTGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSARALVS*GSVGAG
Trigger: GCCCGCCCCCACGGACCCCCAGCTGACCAAGGCACG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAAGTAGCGCCATCCGCTaGGCCACGCCCCCGTCATCA +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPSSAIR*ATPPSS
Trigger: TGATGACGGGGGCGTGGCCCAGCGGATGGCGCTACT...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGGGGGCCGCACCCAGTaGCCGGGAGGCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSGGRTQ*PGGKLL
Trigger: CAGGAGTTTGCCTCCCGGCCACTGGGTGCGGCCCCC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGCGTCTGCTGTCCTGTaGCTCCACCCCTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPASAVL*LHPWLG
Trigger: CCCGAGCCAGGGGTGGAGCCACAGGACAGCAGACGC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATCTGAGCTGGGTAGGTaGGCGAGGACAGGGCCACGC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPSELGR*ARTGPR
Trigger: GCGTGGCCCTGTCCTCGCCCACCTACCCAGCTCAGA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGGCCTGCTCAGCAGCTaGCCGGCCCACGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAGLLSS*PAHGLR
Trigger: CCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGGCGTGACAGCTTCTTaGCCTGCTCAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGGVTAS*PAQQLA
Trigger: GGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGGGGACCCGTGGTGGTaGCTGTGTTGGCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPGDPWW*LCWQPS
Trigger: GGAAGGCTGCCAACACAGCCACCACCACGGGTCCCC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGAACGAGCCCGGCTaGAGCTGCCAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGNEPG*SCQPSG
Trigger: CCCCGAGGGCTGGCAGCTCCAGCCGGGCTCGTTCCC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCTCCCGGGCAGAGATaGTCGAGGCGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPPGQR*SRRGCW
Trigger: CCAGCACCCCCGCCTCGACCATCTCTGCCCGGGAGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGAGGCCGCGTCTTGTTaGCCAGGGCGTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPEAASC*PGRPHS
Trigger: GCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACCAGTCTGGTCCAGGTaGGACACCCCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPPVWSR*DTPTST
Trigger: GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGLPGRV*SSPTPV
Trigger: GACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGGCGGGGTGGGCAACTaGGGCATGCAGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSGGVGN*GMQGWA
Trigger: TGCCCACCCCTGCATGCCCCAGTTGCCCACCCCGCC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCTTGGGGCGCTCTGCTaGGTAGGGCTCTCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPLGALC*VGLSLA
Trigger: CGCCAGGGAGAGCCCTACCCAGCAGAGCGCCCCAAG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000453495.2
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCTCGTTCTCGGCGTTaGTCCTGGCTTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPRSRR*SWLPGP
Trigger: AGGACCTGGAAGCCAGGATCAACGCCGAGAACGAGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGCGGGACTGTAGCATaGGCTCACACTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGCGTVA*AHTPHA
Trigger: GGCGTGAGGAGTGTGAGCTCATGCTACAGTCCCGCA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATGTGAGGCCCGGGTCTaGGTAGCTGTCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPCEARV*VAVSQA
Trigger: AGCCTGGCTGACAGCTACTCAGACCCGGGCCTCACA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCCAGGCCATCCTCTGTaGGGCCCGGGTCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGPGHPL*GPGLSS
Trigger: GCTACTCAGACCCGGGCCTCACAGAGGATGGCCTGG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGGTGGCGGGCGCCGCTaGTGCTCACCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNGGGRR*CSPGTR
Trigger: CCTGGTTCCTGGTGAGCAGCAGCGGCGCCCGCCACC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTGTGCGGTAAGAGGCTaGCTCTGTTCCTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTCAVRG*LCSWSP
Trigger: CGGAGACCAGGAACAGAGGCAGCCTCTTACCGCACA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGCCCATACAGGGGTGTaGGGTAAGAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGAHTGV*GKRLPL
Trigger: CAGAGGCAGCCTCTTACCGCACACCCCTGTATGGGC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGGGCGTCAGGCAGCGTaGTACCATCGTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTGRQAA*YHRPHP
Trigger: GGGGTGAGGACGATGGTAGCACGCTGCCTGACGCCC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTGGAGCTCCCCGTCCTaGTGCACTGGTCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPWSSPS*CTGPLG
Trigger: CCCCAAGGGACCAGTGCAGCAGGACGGGGAGCTCCA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACGCTCCGCCCCCACCTaGCTCTGCATCCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLRSAPT*LCILRG
Trigger: CCCACGAAGGATGCAGAGGCAGGTGGGGGCGGAGCG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCAAGGAGGCGTGGCTCTaGACCACAGGGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSKEAWL*TTGAAP
Trigger: CGGAGCGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGCAGGTCGCTCTTGGTaGTGTGGCGGTCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPAGRSW*CGGHPQ
Trigger: CTGGGGATGACCGCCACAGCACCAAGAGCGACCTGC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTCCTCTGAGTCACTCTaGGTGCCGTCCTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTSSESL*VPSSCL
Trigger: CAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCGCTTGATCTGCCTCTaGAGCCGCACCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPRLICL*SRTCSP
Trigger: CGGGGAGCAGGTGCGGCTGCAGAGGCAGATCAAGCG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCGAGCTGCGGCCCCCTaGCTGGACTGGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALRAAAP*LDWGWD
Trigger: GTCCCAGCCCCAGTCCAGGCAGGGGGCCGCAGCTCG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATCCACCTCCGTGTCCTaGGCCTCGGTCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPSTSVS*ASVSMV
Trigger: CACCATCGAGACCGAGGCGCAGGACACGGAGGTGGA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGCCCACTCCTCCTGCTaGTCTCTGGGCCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNAHSSC*SLGPQG
Trigger: GCCCTGCGGGCCCAGAGAGCAGCAGGAGGAGTGGGC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGCCCACTCCTCCTGCTaGTCTCTGGGCCCGCAGGGC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWAHSSC*SLGPQG
Trigger: GCCCTGCGGGCCCAGAGAGCAGCAGGAGGAGTGGGC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCTGGGCTGGGCTGTCTaGCCTAGGCCCTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSLGWAV*PRPSPS
Trigger: GGATGGGGAGGGCCTAGGGCAGACAGCCCAGCCCAG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGCGGCCTCGGGGTGCTaGCCCCCTCACACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALAASGC*PPHTRH
Trigger: ATGCCGAGTGTGAGGGGGGCAGCACCCCGAGGCCGC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGCGGCCTCGGGGTGCTaGCCCCCTCACACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNAASGC*PPHTRH
Trigger: ATGCCGAGTGTGAGGGGGGCAGCACCCCGAGGCCGC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGCCTCTCTGAGGACTaGTCACGGGCACTGACCAGG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGCLSED*SRALTR
Trigger: CCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCCACGGGCTCAGGGTTaGCCAGGGACCCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWPRAQG*PGTPAH
Trigger: GTGAGCGGGGGTCCCTGGGCAACCCTGAGCCCGTGG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGGTGCGGGCAGGGGCTaGCTCGGGGTCACTAGTCCC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNGAGRG*LGVTSP
Trigger: GGGACTAGTGACCCCGAGGCAGCCCCTGCCCGCACC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGCGGGCAGGGGCTaGCTCGGGGTCACTAGTCCC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGAGRG*LGVTSP
Trigger: GGGACTAGTGACCCCGAGGCAGCCCCTGCCCGCACC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGCCTCGGGGATGCGCTaGACCAGCTCCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWASGMR*TSSSRA
Trigger: TGCCCGGGAGGAGCTGGTGCAGCGCATCCCCGAGGC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGACCTCTCTTCCTCTaGCTGGCCGCAGGCCAGCAC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTRPLFL*LAAGQH
Trigger: GTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCCCCTCACGGGGACATaGCCTGCAGTCCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGPLTGT*PAVLTV
Trigger: CACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGEGVW*RPSCEL
Trigger: AAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATGGGCAACTGGGGCATaGAGGGGTGGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLWATGA*RGGQQP
Trigger: GGGCTGCTGCCCACCCCTGCATGCCCCAGTTGCCCA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGAGGGTGGGCTCTaGGCAGCCACGCGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGEGGL*AATRPF
Trigger: GAAGGGCCGCGTGGCTGCCCAGAGCCCACCCTCACC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGTGCCTCGCTCCTCTTaGGCGCCAAACCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPVPRSS*APNPSR
Trigger: GCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCAC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGCCCGGGGGCCGCCGCTaGCGCAGGGAAAACTTGGTG +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRPGGRR*RRENLV
Trigger: CACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGG...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGCCAGTCGGCCACCTTaGTCTCAGCCGACACCATCT +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGASRPP*SQPTPS
Trigger: AGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACAGGCAGGTCGCTCTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPQAGRS*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAGAGCGACCTGCCTG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGCACCTGCTCCCCGCTaGCCTCCAAGGGCACCCCAG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAAPAPR*PPRAPQ
Trigger: CTGGGGTGCCCTTGGAGGCCAGCGGGGAGCAGGTGC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCTATCGGCCGGCGTTaGGCCACGGCGCTTGTCGGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPIGRR*ATALVG
Trigger: GCCGACAAGCGCCGTGGCCCAACGCCGGCCGATAGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCCTATCGGCCGGCGTTaGGCCACGGCGCTTGTCGGC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALPIGRR*ATALVG
Trigger: GCCGACAAGCGCCGTGGCCCAACGCCGGCCGATAGG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCTGGGGCTGGGACACTaGGGCGGTCCCTATCGGCCG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNLGLGH*GGPYRP
Trigger: CGGCCGATAGGGACCGCCCCAGTGTCCCAGCCCCAG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTGGGGCTGGGACACTaGGGCGGTCCCTATCGGCCG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALGLGH*GGPYRP
Trigger: CGGCCGATAGGGACCGCCCCAGTGTCCCAGCCCCAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWWAMKS*ARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAWAMKS*ARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGACGGGGCTGGTCCCATaGGGTGTCAGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWTGLVP*GVRGAG
Trigger: GCCCGCTCCCCTGACACCCCATGGGACCAGCCCCGT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGGGGGCCGCACCCAGTaGCCGGGAGGCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWGGRTQ*PGGKLL
Trigger: CAGGAGTTTGCCTCCCGGCCACTGGGTGCGGCCCCC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGGGCCGCACCCAGTaGCCGGGAGGCAAACTCCTG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGGRTQ*PGGKLL
Trigger: CAGGAGTTTGCCTCCCGGCCACTGGGTGCGGCCCCC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGGCCGAAGAGGCGGCTaGGCTGCTCACTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPGRRGG*AAHCPA
Trigger: AGCTGGACAGTGAGCAGCCCAGCCGCCTCTTCGGCC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGGATCCAACTCCTCCTaGCCGAAGAGGCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPGSNSS*PKRRLG
Trigger: GCCCAGCCGCCTCTTCGGCCAGGAGGAGTTGGATCC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCACGTGGGCCCCTCCTaGGGGCTCCTGCGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAHVGPS*GLLRLL
Trigger: CAGCAGACGCAGGAGCCCCCAGGAGGGGCCCACGTG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGGGCTTGCCGGGCGCTaGGGGACCACTGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSGLAGR*GTTGWL
Trigger: GAGCCAGCCAGTGGTCCCCCAGCGCCCGGCAAGCCC...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCGGGTCCTGTGCAGCTaGCGGGGATGGCGACATCTC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPRVLCS*RGWRHL
Trigger: GAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGACCCTCGGGGCCTGTaGCCACGCCTTATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPDPRGL*PRLMAE
Trigger: CTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTAGCTGGGGATGGCGGTaGGGCCGCTGGTTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALSWGWR*GRWFPA
Trigger: CGCCGGAAACCAGCGGCCCCACCGCCATCCCCAGCT...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTGCGGCCAGAGAAGCTaGTGCGGGCAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSCGQRS*CGQGLP
Trigger: AGGCAGCCCCTGCCCGCACCAGCTTCTCTGGCCGCA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGCCCTGCTGAAGGGCTaGCGGGGACCCGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAALLKG*RGPVVV
Trigger: CACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGGGAACGAGCCCGGCTaGAGCTGCCAGCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEGNEPG*SCQPSG
Trigger: CCCCGAGGGCTGGCAGCTCCAGCCGGGCTCGTTCCC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCCGGGCGGCACCTTCTaGAAGTTGAGGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGPGGTF*KLRLAS
Trigger: CGAGGCCAGCCTCAACTTCCAGAAGGTGCCGCCCGG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCGGGCGGCACCTTCTaGAAGTTGAGGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTPGGTF*KLRLAS
Trigger: CGAGGCCAGCCTCAACTTCCAGAAGGTGCCGCCCGG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGAGCCTGGCCAGGAGCTaGGCCCAGAGGCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGSLARS*AQRPVG
Trigger: CCCTACAGGCCTCTGGGCCCAGCTCCTGGCCAGGCT...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCACTGCCGAGGGGTaGGAAGGAGCCGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPATAEG*EGAVDE
Trigger: TTCATCCACGGCTCCTTCCCACCCCTCGGCAGTGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCACGCCCCACGAAGATaGGCTCCCGAGGGAGCCGGT +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNHAPRR*APEGAG
Trigger: ACCGGCTCCCTCGGGAGCTCATCTTCGTGGGGCGTG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTCACAAACGTCCCATTaGGGCTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTSQTSH*GCPGPS
Trigger: TGAAGGACCTGGGCAGCCTCAATGGGACGTTTGTGA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGGCCAGGGGGTCCTCTaGGTCACTCTGCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAGQGVL*VTLRAV
Trigger: GACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTGCCACTACGCAGGCTaGCGGTGCTGGCTGTGTCCA +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTCHYAG*RCWLCP
Trigger: TGGACACAGCCAGCACCGTCAGCCTGCGTAGTGGCA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAACTGCTCACGGGCACTaGCCAGGGCGGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGETAHGH*PGRCLP
Trigger: CGGGAGGCACCGCCCTGGTCAGTGCCCGTGAGCAGT...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGTGATGCTGCCTCTCTaGGGACTGCTCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPVMLPL*GLLTGT
Trigger: AGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCAC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGCCACGCCTTATGGCTaGGCGCCGTACCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALATPYG*APYRLS
Trigger: GGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACGCAGCCTCAGTGTCTaGAGCGTCCCCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGERSLSV*SVPQPG
Trigger: GCCCGGCTGGGGGACGCTTCAGACACTGAGGCTGCG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCGCAGCCTCAGTGTCTaGAGCGTCCCCCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALRSLSV*SVPQPG
Trigger: GCCCGGCTGGGGGACGCTTCAGACACTGAGGCTGCG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCTGCCGTCTGCACGATaGAACCATAAGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTLPSAR*NHKGQA
Trigger: AGCCTGACCCTTATGGTTTCATCGTGCAGACGGCAG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGTGCTGGCTGGGAGCTaGCGAGGGGGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALVLAGS*RGGKGV
Trigger: CACGCCCTTGCCCCCTCGTCAGCTCCCAGCCAGCAC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGTGCTGGCTGGGAGCTaGCGAGGGGGCAAGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPVLAGS*RGGKGV
Trigger: CACGCCCTTGCCCCCTCGTCAGCTCCCAGCCAGCAC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAAGTCCCAGGAACAGGTaGGCCTGCCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPSPRNR*ACPPPC
Trigger: ACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGACT...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGKPGFQ*LWSCAH
Trigger: GTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTT...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAKPGFQ*LWSCAH
Trigger: GTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTT...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTGCCCACTTGAGGCCTaGTGGCGTGAAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREACPLEA*WREAKR
Trigger: CCTTTTGGCTTCACGCCATCAGGCCTCAAGTGGGCA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGCCGTGGATGAAGCGTaGCCACTTCATGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPAVDEA*PLHVQG
Trigger: CCCCTGGACATGAAGTGGTCACGCTTCATCCACGGC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGGTCTGAGTGGCTGTTaGGGTGTGGGAGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPGLSGC*GVGACV
Trigger: CACACACGCTCCCACACCTCAACAGCCACTCAGACC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTCAGGGAGAACCACCTaGGGCCAGGCAGGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSSGRTT*GQAGGC
Trigger: ACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATCAGGGAGAACCACCTaGGGCCAGGCAGGCGGGTGT +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLSGRTT*GQAGGC
Trigger: ACACCCGCCTGCCTGGCCGCAGGTGGTTCTCCCTGA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGGCGGGCGCCGCTGCTaGTCACCAGGAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALGGRRC*SPGTRT
Trigger: CGTCCTGGTTCCTGGTGAGCAGCAGCGGCGCCCGCC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGGTGGCGGGCGCCGCTaGTGCTCACCAGGAACCAGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALGGGRR*CSPGTR
Trigger: CCTGGTTCCTGGTGAGCAGCAGCGGCGCCCGCCACC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR GCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAAGGTCCTTCACCCAGTaGTCGTCCCTGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPRSFTQ*SSLSWS
Trigger: CGACCAGGACAGGGACGAGCACTGGGTGAAGGACCT...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTCCTCCGGGACTCGGTaGTGCACACGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSSGTR*CTRSST
Trigger: TGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGAGGA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCCATACAGGGGTGTaGGGTAAGAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPAHTGV*GKRLPL
Trigger: CAGAGGCAGCCTCTTACCGCACACCCCTGTATGGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATGGAGCTCCCCGTCCTaGTGCACTGGTCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLWSSPS*CTGPLG
Trigger: CCCCAAGGGACCAGTGCAGCAGGACGGGGAGCTCCA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCGCTCCGCCCCCACCTaGCTCTGCATCCTTCGTGGG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNRSAPT*LCILRG
Trigger: CCCACGAAGGATGCAGAGGCAGGTGGGGGCGGAGCG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACTGAGTCACTCTGCGTaGCGTCCTCGTGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPLSHSA*RPRACG
Trigger: GCCACAAGCACGAGGACGGCACGCAGAGTGACTCAG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCTCTGCAGCCGCACCTaGTCCCCGCTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALLCSRT*SPLASK
Trigger: CTTGGAGGCCAGCGGGGAGCAGGTGCGGCTGCAGAG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGCTCTGCAGCCGCACCTaGTCCCCGCTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRLCSRT*SPLASK
Trigger: CTTGGAGGCCAGCGGGGAGCAGGTGCGGCTGCAGAG...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTCCCCGGACGGGCTGTaGGTGAAGGACTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWSPDGL*VKDWER
Trigger: GCGCTCCCAGTCCTTCACGCACAGCCCGTCCGGGGA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACAGGCGGGCGAGGGGCTaGCCAGCCGTTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNRRARG*PAVPLS
Trigger: AGACAGAGGAACGGCTGGGCAGCCCCTCGCCCGCCT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGCGGCCTCGGGGTGCTaGCCCCCTCACACTCGGCAT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALAASGC*PPHTRH
Trigger: ATGCCGAGTGTGAGGGGGGCAGCACCCCGAGGCCGC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCCTGGAGACAGCCCGTaGTTCGGCCATGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGPGDSP*FGHGGL
Trigger: AAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCTGGAGACAGCCCGTaGTTCGGCCATGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPPGDSP*FGHGGL
Trigger: AAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTGCCATGCACCCGGCTaGACCCAGGACCTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPCHAPG*TQDLGS
Trigger: GCTTCCAAGGTCCTGGGTGCAGCCGGGTGCATGGCA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACCCCGCCAGAAGGGCTaGCATGCACCCGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEPRQKG*HAPGCT
Trigger: GGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGCCTCCAGTCCCCAGTaGCGCTCCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALASSPQ*RSPSSW
Trigger: CCAGCTGCTGGGGGAGCGGCACTGGGGACTGGAGGC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGCCTCCAGTCCCCAGTaGCGCTCCCCCAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPASSPQ*RSPSSW
Trigger: CCAGCTGCTGGGGGAGCGGCACTGGGGACTGGAGGC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTGGGAGGCCCACAGCTaGCCCGCTGTGGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGWEAHS*PAVGNS
Trigger: GGAATTTCCCACAGCGGGCCAGCTGTGGGCCTCCCA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATGGCCTGGCCAGGTCTaGGGCCTAGATCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPWPGQV*GLDQEP
Trigger: AGGTTCCTGATCTAGGCCCCAGACCTGGCCAGGCCA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCAGGAACCAGGACGTaGCACTCATCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPGTRT*HSSWCW
Trigger: CCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGCCCCCTTCTCCGGCCTaGGGTTCGAGGCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRPPSPA*GSRPRS
Trigger: ACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGGG...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTCCCTTGGGGCGCTCTaGGTAGGGCTCTCCCTGGCG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSASLGAL*VGLSLA
Trigger: CGCCAGGGAGAGCCCTACCCAGAGCGCCCCAAGGGA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGGCTGCACTGGTCCCTTaGGGCGCTCTGGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGAALVP*GALGRA
Trigger: AGCCCTACCCAGAGCGCCCCAAGGGACCAGTGCAGC...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGGATCTCGAAGTAGCTaGGCTCCCGCCGGAACGAGC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPGSRSS*APAGTS
Trigger: GCTCGTTCCGGCGGGAGCCCAGCTACTTCGAGATCC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCCATCTCGCCAGGTGTaGCCTCCTTGCCCGGGGGCC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALPSRQV*PPCPGA
Trigger: GGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTCGCTCTTGGTGCTGTaGCGGTCATCCCCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSLLVL*RSSPGP
Trigger: TGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCAGGCAGGTCGCTCTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGQAGRS*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAGAGCGACCTGCCTG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGGCGCTTGTCGGCCTTaGGGTCCCCGGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEGACRP*GPRTGC
Trigger: ACAGCCCGTCCGGGGACCCCAAGGCCGACAAGCGCC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGGCGCTTGTCGGCCTTaGGGTCCCCGGACGGGCTGT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALGACRP*GPRTGC
Trigger: ACAGCCCGTCCGGGGACCCCAAGGCCGACAAGCGCC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPWAMKS*ARRERR
Trigger: GCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCTCTCCCGCAGACACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPLSRRH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGTCTGCGGGAGAG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCAACACCCCAAAGACCTaGTCGATCATCTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTNTPKT*SIIFRA
Trigger: GGCCCGGAAGATGATCGACCAGGTCTTTGGGGTGTT...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTGGCCGAAGATGCCCTaGAGAGTTCAGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAWPKMP*RVQGTP
Trigger: TGGAGTCCCCTGAACTCTCCAGGGCATCTTCGGCCA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGTCCCCTCTGATGACTaGGCGAAAGGTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAVPSDD*AKGGRR
Trigger: TCTTCGGCCACCTTTCGCCCAGTCATCAGAGGGGAC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTGTCAGCCCTCTCACTaGGCAGCTGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPCQPSH*AAEGAV
Trigger: GACGGCTCCCTCAGCTGCCCAGTGAGAGGGCTGACA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGCGTCTGCTGTCCTGTaGCTCCACCCCTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALASAVL*LHPWLG
Trigger: CCCGAGCCAGGGGTGGAGCCACAGGACAGCAGACGC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGAAAGAGGCGGGAGTTaGCTCCCCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWERGGS*LPGGPW
Trigger: CCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGGCCCTCCCCATCCCCTaGAGCCGCAAGCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGALPIP*SRKRFP
Trigger: AGGAAACCGCTTGCGGCTCCAGGGGATGGGGAGGGC...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAGCCCTCCCCATCCCCTaGAGCCGCAAGCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLALPIP*SRKRFP
Trigger: AGGAAACCGCTTGCGGCTCCAGGGGATGGGGAGGGC...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTTGCCGGAGAAAGGCTaGGGCAGGGCCGTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGLPEKG*GRAVGF
Trigger: GAACCCGACGGCCCTGCCCCAGCCTTTCTCCGGCAA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTGGGTGTCCTGGGAGTaGAAGTCCATGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGWVSWE*KSMRAA
Trigger: GGCCGCACGCATGGACTTCCACTCCCAGGACACCCA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCGGGTCCTGTGCAGCTaGCGGGGATGGCGACATCTC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSRVLCS*RGWRHL
Trigger: GAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTGTGGCCACGCCTTATaGCTGAGCGCCGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTCGHAL*LSAVPA
Trigger: AGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAAGCTGGGGATGGCGGTaGGGCCGCTGGTTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGESWGWR*GRWFPA
Trigger: CGCCGGAAACCAGCGGCCCCACCGCCATCCCCAGCT...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACCGGGCAGCTGGGGATaGCGGTGGGGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSPGSWG*RWGRWF
Trigger: AAACCAGCGGCCCCACCGCCATCCCCAGCTGCCCGG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCGGGCAGCTGGGGATaGCGGTGGGGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPGSWG*RWGRWF
Trigger: AAACCAGCGGCCCCACCGCCATCCCCAGCTGCCCGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCCGCTTCCGGGGCATaGCCAGGATGTCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPASGA*PGCPGV
Trigger: CACGCCTGGACATCCTGGCCATGCCCCGGAAGCGGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGCGGCCAGAGAAGCTaGTGCGGGCAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSACGQRS*CGQGLP
Trigger: AGGCAGCCCCTGCCCGCACCAGCTTCTCTGGCCGCA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGCTTCGGCCATGGTaGGCTTGCGGCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSVLRPW*ACGWHS
Trigger: GCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCAC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGGCGGGGACCCGTGGTaGTGGCTGTGTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRGGDPW*WLCWQP
Trigger: AGGCTGCCAACACAGCCACCACCACGGGTCCCCGCC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGCGTCTGGCTCAGCCTaGCAATCTCCGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGASGSA*QSPQSL
Trigger: CAGAGATTGCGGAGATTGCCAGGCTGAGCCAGACGC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACCTCCCGGGCAGAGATaGTCGAGGCGGGGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEPPGQR*SRRGCW
Trigger: CCAGCACCCCCGCCTCGACCATCTCTGCCCGGGAGG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGAGCCTGGCCAGGAGCTaGGCCCAGAGGCCTGTAGGG +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRSLARS*AQRPVG
Trigger: CCCTACAGGCCTCTGGGCCCAGCTCCTGGCCAGGCT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACGTGTGCATGGGAGTTaGGGGGTGTCTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPRVHGS*GVSAPV
Trigger: CACAGGTGCAGACACCCCCCAACTCCCATGCACACG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCAGTCTGGTCCAGGTaGGACACCCCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPVWSR*DTPTST
Trigger: GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTCACCCACGCCAGTCTaGTCCAGGTGGGACACCCCC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSSPTPV*SRWDTP
Trigger: GGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTLPGRV*SSPTPV
Trigger: GACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCACGTAAACATCAGGTaGGCCGCAGGCTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTHVNIR*AAGSEE
Trigger: TTCCTCTGAGCCTGCGGCCCACCTGATGTTTACGTG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGGCGGGGTGGGCAACTaGGGCATGCAGGGGTGGGCA +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPGGVGN*GMQGWA
Trigger: TGCCCACCCCTGCATGCCCCAGTTGCCCACCCCGCC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGGTGGGAAGGAGCCGTaGATGAAGCGTGACCACTTC +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGGGKEP*MKRDHF
Trigger: GAAGTGGTCACGCTTCATCCACGGCTCCTTCCCACC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGCCACTGCCGAGGGGTaGGAAGGAGCCGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGATAEG*EGAVDE
Trigger: TTCATCCACGGCTCCTTCCCACCCCTCGGCAGTGGC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCAGCTCCTGTTTCCTGTaGGCAGGTCCAGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSSCFL*AGPGSH
Trigger: GTGGGAGCCTGGACCTGCTCACAGGAAACAGGAGCT...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTGTCTTCTCCCGCTTaGGCGAGCCGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALSSPA*ASRPSV
Trigger: CACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTGTGAGGCCCGGGTCTaGGTAGCTGTCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSCEARV*VAVSQA
Trigger: AGCCTGGCTGACAGCTACTCAGACCCGGGCCTCACA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCCAGGCCATCCTCTGTaGGGCCCGGGTCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALPGHPL*GPGLSS
Trigger: GCTACTCAGACCCGGGCCTCACAGAGGATGGCCTGG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCTCTCACTGGGCAGCTaGGGGAGCCGTCGCCGCATG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPLSLGS*GSRRRM
Trigger: CATGCGGCGACGGCTCCCTCAGCTGCCCAGTGAGAG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAACCCACTGGCATCGCTaGGGCTGTCAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPTHWHR*GCQDPT
Trigger: AGTTGGATCCTGACAGCCTCAGCGATGCCAGTGGGT...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTCTCCCATTGGCACTaGCATAGACGCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGFSHWH*HRRHPV
Trigger: CACGGGATGGCGTCTATGTCAGTGCCAATGGGAGAA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCACTGCTCACGGGCACTaGCCAGGGCGGTGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGTAHGH*PGRCLP
Trigger: CGGGAGGCACCGCCCTGGTCAGTGCCCGTGAGCAGT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGTGATGCTGCCTCTCTaGGGACTGCTCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPVMLPL*GLLTGT
Trigger: AGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCAC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTCGGGCCAAGTGGGTaGTGCTGCCTCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSVGPSG*CCLSED
Trigger: GTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGAC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAGTCGGGCCAAGTGGGTaGTGCTGCCTCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLVGPSG*CCLSED
Trigger: GTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGAC...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACTTCTGGGAGCTGGCTaGGCTACGGCTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLLLGAG*ATALLL
Trigger: GAGGAGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCAGGATGTCCAGGCGTaGCAGCTTCTTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPQDVQA*QLLGLL
Trigger: GAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCCAGCCCTCGGGGTCTaGGTGGTGGAGGTGTATCGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWPALGV*VVEVYR
Trigger: CCGATACACCTCCACCACTCAGACCCCGAGGGCTGG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414716.8
CDS-3UTR TCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTMFGTK*PHSRPL
Trigger: GAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACAT...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATGTGCGGTAAGAGGCTaGCTCTGTTCCTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPCAVRG*LCSWSP
Trigger: CGGAGACCAGGAACAGAGGCAGCCTCTTACCGCACA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCAGGCTCGGGTCATTCTaGACCAGCCAGTCGGCCACC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSRLGSF*TSQSAT
Trigger: GGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCCAGGGCCAACCCGGTaGAGCAGGCTCGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWPGPTR*SRLGSF
Trigger: GAATGACCCGAGCCTGCTGCACCGGGTTGGCCCTGG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATGCGTGCCGTCCTCGTaGTTGTGGCCCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLCVPSS*LWPFRV
Trigger: CACCCTGAAGGGCCACAAGCACGAGGACGGCACGCA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCAGGCGGGCGAGGGGCTaGCCAGCCGTTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALRRARG*PAVPLS
Trigger: AGACAGAGGAACGGCTGGGCAGCCCCTCGCCCGCCT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTCCACCTCCGTGTCCTaGGCCTCGGTCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGSTSVS*ASVSMV
Trigger: CACCATCGAGACCGAGGCGCAGGACACGGAGGTGGA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGGAGCCGTCGCCGCATaGGCACAGGCAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGGAVAA*AQAGTP
Trigger: AGGGGTCCCTGCCTGTGCGCATGCGGCGACGGCTCC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCCTCCTGGGGGCTCCTaGGTCTGCTGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWPPGGS*VCCPVA
Trigger: AGCCACAGGACAGCAGACGCAGGAGCCCCCAGGAGG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCTGAGCTACGGCTCTaGTCCTCCCGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEAELRL*SSRAAG
Trigger: CCCAGCTGCCCGGGAGGAGCAGAGCCGTAGCTCAGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGAGCGGGTCAAGGCCTaGGGCCCCTTCTGGGAGCTG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALERVKA*GPFWEL
Trigger: CAGCTCCCAGAAGGGGCCGCAGGCCTTGACCCGCTC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGACAGCTTCTTGGCCTaGTCAGCAGCTGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRDSFLA*SAAGRP
Trigger: GGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGACAGCTTCTTGGCCTaGTCAGCAGCTGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALDSFLA*SAAGRP
Trigger: GGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGAGCCCGGCTGGAGCTaGCAGCCCTCGGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGEPGWS*QPSGSE
Trigger: CTCAGACCCCGAGGGCTGGCAGCTCCAGCCGGGCTC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGAGCCCGGCTGGAGCTaGCAGCCCTCGGGGTCTGAG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLEPGWS*QPSGSE
Trigger: CTCAGACCCCGAGGGCTGGCAGCTCCAGCCGGGCTC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCACGGGGACATGCCCTaGAGTCCTCACGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNHGDMP*SPHGAA
Trigger: CGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTGCCATGCACCCGGCTaGACCCAGGACCTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGCHAPG*TQDLGS
Trigger: GCTTCCAAGGTCCTGGGTGCAGCCGGGTGCATGGCA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRGEGVW*RPSCEL
Trigger: AAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGGAGGGCGTGTGGTaGAGGCCAAGCTGCGAGCTT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGEGVW*RPSCEL
Trigger: AAGCTCGCAGCTTGGCCTGCACCACACGCCCTCCCC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCAGAGGCACCAAGCTCTaGTCACCTGCCATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGRGTKL*SPAMFP
Trigger: TGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCT...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAATGGGCAACTGGGGCATaGAGGGGTGGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEWATGA*RGGQQP
Trigger: GGGCTGCTGCCCACCCCTGCATGCCCCAGTTGCCCA...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTCCCTTGGGGCGCTCTaGTGGGTAGGGCTCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSASLGAL*WVGLSL
Trigger: CAGGGAGAGCCCTACCCAGCAGAGCGCCCCAAGGGA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453495.2
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCTGGCTGGGCCCGTCTaGCCCTGCTGTTCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGLAGPV*PCCSGS
Trigger: CGAGCCCGAACAGCAGGGCCAGACGGGCCCAGCCAG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCATCTTGGTGCTGGCTaGGCCCGTCTGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNHLGAG*ARLALL
Trigger: CAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGCACTCATCTTGGTGCTaGCTGGGCCCGTCTGGCCCT +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGHSSWC*LGPSGP
Trigger: AGGGCCAGACGGGCCCAGCCAGCACCAAGATGAGTG...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGCGGGGTCTCCTTCGTaGGGATCTCGAAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGAGSPS*GSRSSW
Trigger: CCAGCTACTTCGAGATCCCCACGAAGGAGACCCCGC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSMVKEA*LCTTGA
Trigger: GGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCAT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGACGGGGCTGGTCCCATaGGGTGTCAGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLTGLVP*GVRGAG
Trigger: GCCCGCTCCCCTGACACCCCATGGGACCAGCCCCGT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCACGGGGCTGGTCCCATaGGGTGTCAGGGGAGCGGGC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGTGLVP*GVRGAG
Trigger: GCCCGCTCCCCTGACACCCCATGGGACCAGCCCCGT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCTGTTTCCGTGCCTTaGTCAGCTGGGGGTCCGTGG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPVSVP*SAGGPW
Trigger: CCACGGACCCCCAGCTGACCAAGGCACGGAAACAGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGTCCCCTCTGATGACTaGGCGAAAGGTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPVPSDD*AKGGRR
Trigger: TCTTCGGCCACCTTTCGCCCAGTCATCAGAGGGGAC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTGTCAGCCCTCTCACTaGGCAGCTGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSCQPSH*AAEGAV
Trigger: GACGGCTCCCTCAGCTGCCCAGTGAGAGGGCTGACA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTACTGTCCAGCTCCGGTaGCCCAGGCCCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSATVQLR*PRPTPP
Trigger: AGGAGGAGTGGGCCTGGGCCACCGGAGCTGGACAGT...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGGCCGAAGAGGCGGCTaGGCTGCTCACTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWGRRGG*AAHCPA
Trigger: AGCTGGACAGTGAGCAGCCCAGCCGCCTCTTCGGCC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGAAAGAGGCGGGAGTTaGCTCCCCGGGGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALERGGS*LPGGPW
Trigger: CCAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACTTGCCGGAGAAAGGCTaGGGCAGGGCCGTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNLPEKG*GRAVGF
Trigger: GAACCCGACGGCCCTGCCCCAGCCTTTCTCCGGCAA...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTGGGTGTCCTGGGAGTaGAAGTCCATGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGWVSWE*KSMRAA
Trigger: GGCCGCACGCATGGACTTCCACTCCCAGGACACCCA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCGGGTCCTGTGCAGCTaGCGGGGATGGCGACATCTC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNRVLCS*RGWRHL
Trigger: GAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGACCCTCGGGGCCTGTaGCCACGCCTTATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALDPRGL*PRLMAE
Trigger: CTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCCACGCTCCTCACTaGGCCAATCCAGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGHAPH*ANPGTL
Trigger: GAGGGTCCCTGGATTGGCCCAGTGAGGAGCGTGGCC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCCGTCCTGCCCCGGTaGCCTCAGGGGTTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEAVLPR*PQGFRG
Trigger: ACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCCTGCGGCCCCTTCTaGGAGCTGGCTGAGCTACGG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSACGPF*ELAELR
Trigger: CCGTAGCTCAGCCAGCTCCCAGAAGGGGCCGCAGGC...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGTGTGGGGCGAGGGGTaGACAGGCTGTTGGAGCGGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALVWGEG*TGCWSG
Trigger: CCCGCTCCAACAGCCTGTCCACCCCTCGCCCCACAC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTGGTGGGCTTGCGGCTaGCACAGCACAACTCCACAC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGWWACG*HSTTPH
Trigger: GTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGGCGGGGACCCGTGGTaGTGGCTGTGTTGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEGGDPW*WLCWQP
Trigger: AGGCTGCCAACACAGCCACCACCACGGGTCCCCGCC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGCTGGCGGGGACCCGTaGTGGTGGCTGTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALAGGDP*WWLCWQ
Trigger: CTGCCAACACAGCCACCACCACGGGTCCCCGCCAGC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTCGGGGTCTGAGTGGTaGAGGTGTATCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSGSEW*RCIGHC
Trigger: GCAGTGCCCGATACACCTCCACCACTCAGACCCCGA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000414716.8
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCCGGGCGGCACCTTCTaGAAGTTGAGGCTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALPGGTF*KLRLAS
Trigger: CGAGGCCAGCCTCAACTTCCAGAAGGTGCCGCCCGG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGAGGCCGCGTCTTGTTaGCCAGGGCGTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAEAASC*PGRPHS
Trigger: GCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCGCCCACAGGGATATaGCACATGTGGGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPPTGI*HMWGSS
Trigger: TGAAGACCCCCACATGTGCCATATCCCTGTGGGCGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACTCTCAACAAGCCCCTaGTCCATACCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPLSTSP*SIPRRP
Trigger: AGGCCTCCTGGGTATGGACCAGGGGCTTGTTGAGAG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCAGCGTGGAGGCGCCTaGACTAGCCGTGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWQRGGA*TSRVHG
Trigger: CCCATGCACACGGCTAGTCCAGGCGCCTCCACGCTG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGGTGGGAAGGAGCCGTaGATGAAGCGTGACCACTTC +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPGGKEP*MKRDHF
Trigger: GAAGTGGTCACGCTTCATCCACGGCTCCTTCCCACC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCAAAGGAGCTCAGTGTaGGGAGGAGCAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTQRSSV*GGAGTC
Trigger: ACAAGTTCCTGCTCCTCCCCACACTGAGCTCCTTTG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGCTGCACTGGTCCCTTaGGGCGCTCTGCTGGGTAGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWAALVP*GALLGR
Trigger: CCTACCCAGCAGAGCGCCCCAAGGGACCAGTGCAGC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000453495.2
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGCCGGCGCCTCGTGTTaGAGGTGTATCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNAGASC*RCIGHC
Trigger: GCAGTGCCCGATACACCTCCAACACGAGGCGCCGGC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCACTCCTCCTCAGAGGTaGACGTGTAATCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGTPPQR*TCNPSP
Trigger: AGGGCTCGGATTACACGTCCACCTCTGAGGAGGAGT...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGTTTGGGGGAGCCGTaGCGGGAGCCGTACTCCTCC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSACLGEP*REPYSS
Trigger: GGAGGAGTACGGCTCCCGCCACGGCTCCCCCAAACA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGGGAGCGTGTGTGTTTaGGGGAGCCGTGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPGSVCV*GSRGGS
Trigger: GCTCCCGCCACGGCTCCCCCAAACACACACGCTCCC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
3UTR CAA 72 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTaGGTCGTGCGCTCACCCCCGCCAGAAGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVT*VVRSPPPEGLP
Trigger: TGGCAGCCCTTCTGGCGGGGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATCACAAACGTCCCATTaGGGCTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPSQTSH*GCPGPS
Trigger: TGAAGGACCTGGGCAGCCTCAATGGGACGTTTGTGA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCTGTCTTCTCCCGCTTaGGCGAGCCGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALLSSPA*ASRPSV
Trigger: CACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACTGTCTTCTCCCGCTTaGGCGAGCCGGCCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSLSSPA*ASRPSV
Trigger: CACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCATGTCCCTGCGTCACTaGGGCTGTCGTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSMSLRH*GCRPPP
Trigger: AGGAGGAGGACGACAGCCTCAGTGACGCAGGGACAT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACTGTGAGGCCCGGGTCTaGGTAGCTGTCAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNCEARV*VAVSQA
Trigger: AGCCTGGCTGACAGCTACTCAGACCCGGGCCTCACA...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCAGGCCATCCTCTGTaGGGCCCGGGTCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPGHPL*GPGLSS
Trigger: GCTACTCAGACCCGGGCCTCACAGAGGATGGCCTGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCTCTCACTGGGCAGCTaGGGGAGCCGTCGCCGCATG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGLSLGS*GSRRRM
Trigger: CATGCGGCGACGGCTCCCTCAGCTGCCCAGTGAGAG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCACCCACTGGCATCGCTaGGGCTGTCAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTTHWHR*GCQDPT
Trigger: AGTTGGATCCTGACAGCCTCAGCGATGCCAGTGGGT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCATTCTGGTCCCCAATaGAGAAAGAGGCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREAHSGPQ*RKRREL
Trigger: CAACTCCCGCCTCTTTCTTCATTGGGGACCAGAATG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCAGGCCGTAGCTGGATaGCCATTCTCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGQAVAG*PFSHWH
Trigger: GTGCCAATGGGAGAATGGTCATCCAGCTACGGCCTG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGATGCTGCCTCTCTaGGGACTGCTCACGGGCACT +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSVMLPL*GLLTGT
Trigger: AGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCAC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGGTCGGGCCAAGTGGGTaGTGCTGCCTCTCTGAGGAC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWVGPSG*CCLSED
Trigger: GTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGAC...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACAGGATGTCCAGGCGTaGCAGCTTCTTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLQDVQA*QLLGLL
Trigger: GAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGATGCCCTTGAGGGCTTaGCCTTGGCAGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRMPLRA*PWQQPG
Trigger: GCCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCAT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGGAAGGAGCCGTGGATaGAGCGTGACCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPGRSRG*SVTTSC
Trigger: ACATGAAGTGGTCACGCTTCATCCACGGCTCCTTCC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGGGTCTGAGTGGCTGTTaGGGTGTGGGAGCGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGGLSGC*GVGACV
Trigger: CACACACGCTCCCACACCTCAACAGCCACTCAGACC...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTTGATGACGGCATGCTaGTTGTCCACGCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTLMTAC*LSTLRD
Trigger: GTCCCGCAGCGTGGACAAGCAGCATGCCGTCATCAA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGGGCGTCAGGCAGCGTaGTACCATCGTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEGRQAA*YHRPHP
Trigger: GGGGTGAGGACGATGGTAGCACGCTGCCTGACGCCC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGCCCCCACCTGCCTCTaGATCCTTCGTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRAPTCL*ILRGHL
Trigger: GAGATGCCCACGAAGGATGCAGAGGCAGGTGGGGGC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGAAGGAGGCGTGGCTCTaGACCACAGGGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLKEAWL*TTGAAP
Trigger: CGGAGCGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAAGGAGGCGTGGCTCTaGACCACAGGGGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGKEAWL*TTGAAP
Trigger: CGGAGCGGCCCCTGTGGTGCAGAGCCACGCCTCCTT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCCAGGGCCAACCCGGTaGAGCAGGCTCGGGTCATTC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALPGPTR*SRLGSF
Trigger: GAATGACCCGAGCCTGCTGCACCGGGTTGGCCCTGG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGCAGGTCGCTCTTGGTaGTGTGGCGGTCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNAGRSW*CGGHPQ
Trigger: CTGGGGATGACCGCCACAGCACCAAGAGCGACCTGC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACTGCGTGCCGTCCTCGTaGTTGTGGCCCTTCAGGGTG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNCVPSS*LWPFRV
Trigger: CACCCTGAAGGGCCACAAGCACGAGGACGGCACGCA...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTCCTCTGAGTCACTCTaGGTGCCGTCCTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGSSESL*VPSSCL
Trigger: CAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCTCTGCAGCCGCACCTaGTCCCCGCTGGCCTCCAAG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGLCSRT*SPLASK
Trigger: CTTGGAGGCCAGCGGGGAGCAGGTGCGGCTGCAGAG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAGGCGGGCGAGGGGCTaGCCAGCCGTTCCTCTGTCT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGRRARG*PAVPLS
Trigger: AGACAGAGGAACGGCTGGGCAGCCCCTCGCCCGCCT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCGGGAGGCAAACTCCTaGAGTAGCGCCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWREANS*SSAIRW
Trigger: CCAGCGGATGGCGCTACTGCAGGAGTTTGCCTCCCG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCCTCCTGGGGGCTCCTaGGTCTGCTGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALPPGGS*VCCPVA
Trigger: AGCCACAGGACAGCAGACGCAGGAGCCCCCAGGAGG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGCTGAGCTACGGCTCTaGTCCTCCCGGGCAGCTGGG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGAELRL*SSRAAG
Trigger: CCCAGCTGCCCGGGAGGAGCAGAGCCGTAGCTCAGC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGACAGCTTCTTGGCCTaGTCAGCAGCTGGCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALDSFLA*SAAGRP
Trigger: GGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCAGCACAACTCCACACTaGGGCCAGAGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSTTPH*GQRSWC
Trigger: GCACCAGCTTCTCTGGCCGCAGTGTGGAGTTGTGCT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCTGGAGACAGCCCGTaGTTCGGCCATGGTGGGCTT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPGDSP*FGHGGL
Trigger: AAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCAATCTCCGCAATCTCTaGCGTCTGCACGATGAAACC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTNLRNL*RLHDET
Trigger: GGTTTCATCGTGCAGACGGCAGAGATTGCGGAGATT...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTTCTCACGGATGGCCTaGGACAGCTGGGACACCGGG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAFSRMA*DSWDTG
Trigger: CCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTTTCTCACGGATGGCCTaGGACAGCTGGGACACCGGG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALFSRMA*DSWDTG
Trigger: CCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAA...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCTGGAGGGGGCACCTaGAATGGCACCAACAACTCT +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPPGGGT*NGTNNS
Trigger: AGAGTTGTTGGTGCCATTGCAGGTGCCCCCTCCAGG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACTGCAGTCCTCACGGTaGAGCGTGGAGGCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGELQSSR*SVEAPG
Trigger: TCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCACGGGGACATGCCCTaGAGTCCTCACGGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALHGDMP*SPHGAA
Trigger: CGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGACATTGCACAGCCACTaGCGAGGGGTGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGTLHSH*RGVGRS
Trigger: GCTCCTTCCCACCCCTCGGCAGTGGCTGTGCAATGT...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAACATTGCACAGCCACTaGCGAGGGGTGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLTLHSH*RGVGRS
Trigger: GCTCCTTCCCACCCCTCGGCAGTGGCTGTGCAATGT...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGTGGGAGGCCCACAGCTaGCCCGCTGTGGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRWEAHS*PAVGNS
Trigger: GGAATTTCCCACAGCGGGCCAGCTGTGGGCCTCCCA...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCATCTTGGTGCTGGCTaGGCCCGTCTGGCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALHLGAG*ARLALL
Trigger: CAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGTGCCTCGCTCCTCTTaGGCGCCAAACCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALVPRSS*APNPSR
Trigger: GCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCAC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCCCCCTTCTCCGGCCTaGGGTTCGAGGCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGPPSPA*GSRPRS
Trigger: ACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGGG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGATCTCGAAGTAGCTaGGCTCCCGCCGGAACGAGC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGSRSS*APAGTS
Trigger: GCTCGTTCCGGCGGGAGCCCAGCTACTTCGAGATCC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCCTCTGCATCCTTCGTaGGCATCTCGTGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSPLHPS*ASRVPA
Trigger: TGCCGGCACACGAGATGCCCACGAAGGATGCAGAGG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTGTGCGTGAAGGACTaGGAGCGCTTCTTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTLCVKD*ERFFRG
Trigger: ACCCCGAAAGAAGCGCTCCCAGTCCTTCACGCACAG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGCCCCCTGCCTGGACTaGGGCTGGGACACTGGGGCG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRAPCLD*GWDTGA
Trigger: CGCCCCAGTGTCCCAGCCCCAGTCCAGGCAGGGGGC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCTCTCCCGCAGACACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWLSRRH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGTCTGCGGGAGAG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCGTGCCTTGGTCAGCTaGGGGTCCGTGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRRALVS*GSVGAG
Trigger: GCCCGCCCCCACGGACCCCCAGCTGACCAAGGCACG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGTCCCCTCTGATGACTaGGCGAAAGGTGGCCGAAGA +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPVPSDD*AKGGRR
Trigger: TCTTCGGCCACCTTTCGCCCAGTCATCAGAGGGGAC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAAGTAGCGCCATCCGCTaGGCCACGCCCCCGTCATCA +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSSSAIR*ATPPSS
Trigger: TGATGACGGGGGCGTGGCCCAGCGGATGGCGCTACT...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTTGTCAGCCCTCTCACTaGGCAGCTGAGGGAGCCGTC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALCQPSH*AAEGAV
Trigger: GACGGCTCCCTCAGCTGCCCAGTGAGAGGGCTGACA...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACTGTCCAGCTCCGGTaGCCCAGGCCCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALTVQLR*PRPTPP
Trigger: AGGAGGAGTGGGCCTGGGCCACCGGAGCTGGACAGT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGGATCCAACTCCTCCTaGCCGAAGAGGCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPGSNSS*PKRRLG
Trigger: GCCCAGCCGCCTCTTCGGCCAGGAGGAGTTGGATCC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGCGTCTGCTGTCCTGTaGCTCCACCCCTGGCTCGGG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGASAVL*LHPWLG
Trigger: CCCGAGCCAGGGGTGGAGCCACAGGACAGCAGACGC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGCCCTCCCCATCCCCTaGAGCCGCAAGCGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALALPIP*SRKRFP
Trigger: AGGAAACCGCTTGCGGCTCCAGGGGATGGGGAGGGC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTTGCCGGAGAAAGGCTaGGGCAGGGCCGTCGGGTTC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPLPEKG*GRAVGF
Trigger: GAACCCGACGGCCCTGCCCCAGCCTTTCTCCGGCAA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTGGGGGACCACTGGCTaGCTCCTTAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGWGTTG*LLSEAL
Trigger: GAGAGCTTCACTAAGGAGCCAGCCAGTGGTCCCCCA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTTGTGGCCACGCCTTATaGCTGAGCGCCGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALCGHAL*LSAVPA
Trigger: AGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACA...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGGCCACGCTCCTCACTaGGCCAATCCAGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALGHAPH*ANPGTL
Trigger: GAGGGTCCCTGGATTGGCCCAGTGAGGAGCGTGGCC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACAGGGGTTTCGTGGTTaGAGGCCATCACATCTGAGC +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPQGFRG*RPSHLS
Trigger: GCTCAGATGTGATGGCCTCCAACCACGAAACCCCTG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGCCCCTTCTGGGAGCTaGCTGAGCTACGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNAPSGS*LSYGSA
Trigger: AGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAGGGGC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGCCCCTTCTGGGAGCTaGCTGAGCTACGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALAPSGS*LSYGSA
Trigger: AGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAGGGGC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGCCTGCGGCCCCTTCTaGGAGCTGGCTGAGCTACGG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLACGPF*ELAELR
Trigger: CCGTAGCTCAGCCAGCTCCCAGAAGGGGCCGCAGGC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTGCGGCCAGAGAAGCTaGTGCGGGCAGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGCGQRS*CGQGLP
Trigger: AGGCAGCCCCTGCCCGCACCAGCTTCTCTGGCCGCA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCCCGTGCTTCGGCCATaGTGGGCTTGCGGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGPVLRP*WACGWH
Trigger: GTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGGGGACCCGTGGTGGTaGCTGTGTTGGCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPGDPWW*LCWQPS
Trigger: GGAAGGCTGCCAACACAGCCACCACCACGGGTCCCC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTCCTTCACCAGCGTCTaGCTCAGCCTGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSFTSV*LSLAIS
Trigger: GGAGATTGCCAGGCTGAGCCAGACGCTGGTGAAGGA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCACATCGTGGATCTCCTaGGCTAGGATGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPTSWIS*ARMATS
Trigger: GGACGTGGCCATCCTAGCCCAGGAGATCCACGATGT...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGATGGCCTGCGACAGCTaGGACACCGGGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGMACDS*DTGFSI
Trigger: GATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCAT...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCGCCCACAGGGATATaGCACATGTGGGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPPPTGI*HMWGSS
Trigger: TGAAGACCCCCACATGTGCCATATCCCTGTGGGCGG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTTGGCAGGTTAGTGCCTaGCGGAGCCAGTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALWQVSA*RSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCA...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACAGCACAAAGGGTTATaGCAGGTTAGTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPQHKGL*QVSAWR
Trigger: CCGCCAGGCACTAACCTGCCATAACCCTTTGTGCTG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGCCCACCTCCATGTTTaGCACCAAATGACCCCACAG +
Preference number: 4 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPAHLHV*HQMTPQ
Trigger: CTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCGTGTGCATGGGAGTTaGGGGGTGTCTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSRVHGS*GVSAPV
Trigger: CACAGGTGCAGACACCCCCCAACTCCCATGCACACG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGGGCCAACGGGCTCTTTaGCTTAGAGGCTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGGQRAL*LRGSGN
Trigger: GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCC...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGTTGCCAGGCAGGGTGTaGAGCTCACCCACGCCAGTC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRLPGRV*SSPTPV
Trigger: GACTGGCGTGGGTGAGCTCCACACCCTGCCTGGCAA...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGTGGGCAGCAGCCCGGTaGACCGGGCTAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLWAAAR*TGLAPP
Trigger: AGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGCCCA...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGCCACTGCCGAGGGGTaGGAAGGAGCCGTGGATGAA +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRATAEG*EGAVDE
Trigger: TTCATCCACGGCTCCTTCCCACCCCTCGGCAGTGGC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGCCGGCGCCTCGTGTTaGAGGTGTATCGGGCACTGC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPAGASC*RCIGHC
Trigger: GCAGTGCCCGATACACCTCCAACACGAGGCGCCGGC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTGTTTGGGGGAGCCGTaGCGGGAGCCGTACTCCTCC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPCLGEP*REPYSS
Trigger: GGAGGAGTACGGCTCCCGCCACGGCTCCCCCAAACA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGGGAGCGTGTGTGTTTaGGGGAGCCGTGGCGGGAGC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLGSVCV*GSRGGS
Trigger: GCTCCCGCCACGGCTCCCCCAAACACACACGCTCCC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGTGGCTGTTGAGGTGTaGGAGCGTGTGTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPVAVEV*ERVCLG
Trigger: CCCCAAACACACACGCTCCCACACCTCAACAGCCAC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTTCTCCCATTGGCACTaGCATAGACGCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGFSHWH*HRRHPV
Trigger: CACGGGATGGCGTCTATGTCAGTGCCAATGGGAGAA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCAGGCCGTAGCTGGATaGCCATTCTCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSQAVAG*PFSHWH
Trigger: GTGCCAATGGGAGAATGGTCATCCAGCTACGGCCTG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACTTCTGGGAGCTGGCTaGGCTACGGCTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGELLGAG*ATALLL
Trigger: GAGGAGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGTGCTGGGCATGTTGCTaGGGGAGGCGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLCWACC*GRRCGQ
Trigger: CTGCCCACAGCGCCTCCCTCAGCAACATGCCCAGCA...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCATGCCCTTGAGGGCTTaGCCTTGGCAGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPMPLRA*PWQQPG
Trigger: GCCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCAT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTAGTCCCAGGAACAGGTaGGCCTGCCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSASPRNR*ACPPPC
Trigger: ACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGACT...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGAGTCCCAGGAACAGGTaGGCCTGCCCACCTCCATGT +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWSPRNR*ACPPPC
Trigger: ACATGGAGGTGGGCAGGCTCACCTGTTCCTGGGACT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGAAGGAGCCGTGGATaGAGCGTGACCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGRSRG*SVTTSC
Trigger: ACATGAAGTGGTCACGCTTCATCCACGGCTCCTTCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTGGCACTCATCTTGGTaGTGGCTGGGCCCGTCTGGC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALWHSSW*WLGPSG
Trigger: GCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGCGGGCGCCGCTGCTaGTCACCAGGAACCAGGACG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGGRRC*SPGTRT
Trigger: CGTCCTGGTTCCTGGTGAGCAGCAGCGGCGCCCGCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTAGGTCCTTCACCCAGTaGTCGTCCCTGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSARSFTQ*SSLSWS
Trigger: CGACCAGGACAGGGACGAGCACTGGGTGAAGGACCT...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACAGGTCCTTCACCCAGTaGTCGTCCCTGTCCTGGTCG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNRSFTQ*SSLSWS
Trigger: CGACCAGGACAGGGACGAGCACTGGGTGAAGGACCT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTCCGGGACTCGGTGCTaGACACGCTCCAGCACATAC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWSGTRC*TRSSTY
Trigger: GTATGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTCCTCCGGGACTCGGTaGTGCACACGCTCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPSSGTR*CTRSST
Trigger: TGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGAGGA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTTTTCATGCTTGAGTaGCTCCTCCGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTLFMLE*LLRDSV
Trigger: CACCGAGTCCCGGAGGAGGCACTCAAGCATGAAAAG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCTTTTCATGCTTGAGTaGCTCCTCCGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGLFMLE*LLRDSV
Trigger: CACCGAGTCCCGGAGGAGGCACTCAAGCATGAAAAG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCCTTCACGCTCACCTaGAGCTGGCTGGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPPFTLT*SWLVYF
Trigger: AAAGTACACCAGCCAGCTGCAGGTGAGCGTGAAGGG...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATGTGTGTTCCGGCAGTaGCTCGCTCCTCTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSCVFRQ*LAPLGR
Trigger: GCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACGCCCATACAGGGGTGTaGGGTAAGAGGCTGCCTCTG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNAHTGV*GKRLPL
Trigger: CAGAGGCAGCCTCTTACCGCACACCCCTGTATGGGC...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGTGGAGCTCCCCGTCCTaGTGCACTGGTCCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLWSSPS*CTGPLG
Trigger: CCCCAAGGGACCAGTGCAGCAGGACGGGGAGCTCCA...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGCCCCCACCTGCCTCTaGATCCTTCGTGGGCATCTC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPAPTCL*ILRGHL
Trigger: GAGATGCCCACGAAGGATGCAGAGGCAGGTGGGGGC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCGCTTGATCTGCCTCTaGAGCCGCACCTGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLRLICL*SRTCSP
Trigger: CGGGGAGCAGGTGCGGCTGCAGAGGCAGATCAAGCG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAATCCACCTCCGTGTCCTaGGCCTCGGTCTCGATGGTG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGESTSVS*ASVSMV
Trigger: CACCATCGAGACCGAGGCGCAGGACACGGAGGTGGA...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCGGGAGGCAAACTCCTaGAGTAGCGCCATCCGCTGG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPREANS*SSAIRW
Trigger: CCAGCGGATGGCGCTACTGCAGGAGTTTGCCTCCCG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGAGCCGTCGCCGCATaGGCACAGGCAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGAVAA*AQAGTP
Trigger: AGGGGTCCCTGCCTGTGCGCATGCGGCGACGGCTCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAAAGAGGCGGCTGGGCTaGTCACTGTCCAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEKRRLG*SLSSSG
Trigger: ACCGGAGCTGGACAGTGAGCAGCCCAGCCGCCTCTT...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATTAGTGAAGCTCTCTTaGCGGAGAAAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPLVKLS*RRKAGA
Trigger: TGCCCCAGCCTTTCTCCGGCAAGAGAGCTTCACTAA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGCCTCTCTGAGGACTaGTCACGGGCACTGACCAGG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSACLSED*SRALTR
Trigger: CCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCGGCCATGGTGGGCTTaGGGCTGGCACAGCACAACT +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPRPWWA*GWHSTT
Trigger: AGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACGGCCATGGTGGGCTTaGGGCTGGCACAGCACAACT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGERPWWA*GWHSTT
Trigger: AGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTGGTGCAGGCCAAGCTaGGAGCTTCCGGAAACCCGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALWCRPS*ELPETR
Trigger: CCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCGACTCTCATACCATTaGCAGGCAGGGTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGRLSYH*QAGCGA
Trigger: AGCTCCACACCCTGCCTGGCAATGGTATGAGAGTCG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCTGCTTGTCCACGCTaGGGGACTGCTGTTCGGGCT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEAACPR*GTAVRA
Trigger: AGCCCGAACAGCAGTCCCGCAGCGTGGACAAGCAGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACACAGCTGGCCCGCTGTaGGAAATTCCTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNTAGPL*EIPQGQ
Trigger: CTGCCCCTGAGGAATTTCCCACAGCGGGCCAGCTGT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGACAGCTGGCCCGCTGTaGGAAATTCCTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRTAGPL*EIPQGQ
Trigger: CTGCCCCTGAGGAATTTCCCACAGCGGGCCAGCTGT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGACGTGGCACTCATCTTaGTGCTGGCTGGGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRTWHSS*CWLGPS
Trigger: AGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCAGCGTGACGTACTTCTaGTCCGGGATGCGCATGTCA +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSVTYF*SGMRMS
Trigger: TGACATGCGCATCCCGGACCAGAAGTACGTCACGCT...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCGAGGCCTCGCAGTATaGTGTGTGTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSARGLAV*CVFRQC
Trigger: GCACTGCCGGAACACACACCATACTGCGAGGCCTCG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGGCTGCCTCTGTTCCTaGTCTCCGGTCCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEGCLCS*SPVPLL
Trigger: GAGAAGGGGGACCGGAGACCAGGAACAGAGGCAGCC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGGATCTCGAAGTAGCTaGGCTCCCGCCGGAACGAGC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSGSRSS*APAGTS
Trigger: GCTCGTTCCGGCGGGAGCCCAGCTACTTCGAGATCC...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCAGGCAGGTCGCTCTTaGTGCTGTGGCGGTCATCCC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPQAGRS*CCGGHP
Trigger: GGGATGACCGCCACAGCACCAAGAGCGACCTGCCTG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCGGCCGAGGCCGCCTTaGCCAGGGGGTCCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRRPRPP*PGGPLS
Trigger: ACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATGGCCGAAGATGCCCTaGAGAGTTCAGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLWPKMP*RVQGTP
Trigger: TGGAGTCCCCTGAACTCTCCAGGGCATCTTCGGCCA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGAGTAGCGCCATCCGCTaGGCCACGCCCCCGTCATCA +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLSSAIR*ATPPSS
Trigger: TGATGACGGGGGCGTGGCCCAGCGGATGGCGCTACT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTACAGCGTCCCCATTCTaGTCCCCAATGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREATASPF*SPMKKE
Trigger: CTCTTTCTTCATTGGGGACCAGAATGGGGACGCTGT...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATGGGGGACCACTGGCTaGCTCCTTAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLWGTTG*LLSEAL
Trigger: GAGAGCTTCACTAAGGAGCCAGCCAGTGGTCCCCCA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATGGGTGTCCTGGGAGTaGAAGTCCATGCGTGCGGCC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSWVSWE*KSMRAA
Trigger: GGCCGCACGCATGGACTTCCACTCCCAGGACACCCA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGACCCTCGGGGCCTGTaGCCACGCCTTATGGCTGAG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGDPRGL*PRLMAE
Trigger: CTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGCCTCAGGGGTTTCGTaGTTGGAGGCCATCACATCT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGASGVS*LEAITS
Trigger: AGATGTGATGGCCTCCAACCACGAAACCCCTGAGGC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGCCTCAGGGGTTTCGTaGTTGGAGGCCATCACATCT +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTASGVS*LEAITS
Trigger: AGATGTGATGGCCTCCAACCACGAAACCCCTGAGGC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCCGGGCAGCTGGGGATaGCGGTGGGGCCGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRPGSWG*RWGRWF
Trigger: AAACCAGCGGCCCCACCGCCATCCCCAGCTGCCCGG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGGGTGGACAGGCTGTTaGAGCGGGTCAAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLGWTGC*SGSRPA
Trigger: CGCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGGTGGGCTTGCGGCTaGCACAGCACAACTCCACAC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWWWACG*HSTTPH
Trigger: GTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGGGGACCCGTGGTGGTaGCTGTGTTGGCAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGGDPWW*LCWQPS
Trigger: GGAAGGCTGCCAACACAGCCACCACCACGGGTCCCC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTCTCCTGGGCTAGGATaGCCACGTCCTTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWSPGLG*PRPSPA
Trigger: CGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCTGTCGTTCATGTTCTaGTCAAAGTCCCGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RALTPARRAAMHPAAPRTLSFMF*SKSREF
Trigger: GAACTCTCGGGACTTTGACCAGAACATGAACGACAG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTGGCAGGTTAGTGCCTaGCGGAGCCAGTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALWQVSA*RSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCTCTCAACAAGCCCCTaGTCCATACCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSLSTSP*SIPRRP
Trigger: AGGCCTCCTGGGTATGGACCAGGGGCTTGTTGAGAG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGCTCTCAACAAGCCCCTaGTCCATACCCAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGLSTSP*SIPRRP
Trigger: AGGCCTCCTGGGTATGGACCAGGGGCTTGTTGAGAG...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCTGCACCCAGGACCTTaGAAGCCCACCTACAGAGGC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNLHPGP*KPTYRG
Trigger: GCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCTGCACCCAGGACCTTaGAAGCCCACCTACAGAGGC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWLHPGP*KPTYRG
Trigger: GCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTGCACCCAGGACCTTaGAAGCCCACCTACAGAGGC +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALHPGP*KPTYRG
Trigger: GCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCCCTCGGGGTCTGAGTaGCTGTTGAGGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALPSGSE*LLRCGS
Trigger: GCTCCCACACCTCAACAGCCACTCAGACCCCGAGGG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCTCGTTCTCGGCGTTaGTCCTGGCTTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPRSRR*SWLPGP
Trigger: AGGACCTGGAAGCCAGGATCAACGCCGAGAACGAGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCATGTCCCTGCGTCACTaGGGCTGTCGTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALMSLRH*GCRPPP
Trigger: AGGAGGAGGACGACAGCCTCAGTGACGCAGGGACAT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCATTCTGGTCCCCAATaGAGAAAGAGGCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGHSGPQ*RKRREL
Trigger: CAACTCCCGCCTCTTTCTTCATTGGGGACCAGAATG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCAGGCCGTAGCTGGATaGCCATTCTCCCATTGGCAC +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALQAVAG*PFSHWH
Trigger: GTGCCAATGGGAGAATGGTCATCCAGCTACGGCCTG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGCTGCCGTCTGCACGATaGAACCATAAGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGLPSAR*NHKGQA
Trigger: AGCCTGACCCTTATGGTTTCATCGTGCAGACGGCAG...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGCACCTTCTGGAAGTTaGGGCTGGCCTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLAPSGS*GWPRGC
Trigger: GCATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCATGCCCTTGAGGGCTTaGCCTTGGCAGCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGMPLRA*PWQQPG
Trigger: GCCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCAT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTC +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTMFGTK*PHSRPL
Trigger: GAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACAT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCCGTGGATGAAGCGTaGCCACTTCATGTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEAVDEA*PLHVQG
Trigger: CCCCTGGACATGAAGTGGTCACGCTTCATCCACGGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAGGAAGGAGCCGTGGATaGAGCGTGACCACTTCATGT +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLGRSRG*SVTTSC
Trigger: ACATGAAGTGGTCACGCTTCATCCACGGCTCCTTCC...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTAGCCACAAGACCACCTaGGAACGAATGTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: GRRVCGGRKAETHTHREASHKTT*ERMYSE
Trigger: TTCACTGTACATTCGTTCTCAGGTGGTCTTGTGGCT...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATCCGGGACTCGGTGCTaGACACGCTCCAGCACATAC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSSGTRC*TRSSTY
Trigger: GTATGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTGTGTGTTCCGGCAGTaGCTCGCTCCTCTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGCVFRQ*LAPLGR
Trigger: GCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGAGCTCCCCGTCCTGCTaGACTGGTCCCTTGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRSSPSC*TGPLGR
Trigger: GCGCCCCAAGGGACCAGTGCAGCAGGACGGGGAGCT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCATCATCTTGCCAGGGCTaGAGTCATCAAACTCGATGG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPSSCQG*SHQTRW
Trigger: CCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGA...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACTGAGTCACTCTGCGTaGCGTCCTCGTGCTTGTGGC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSLSHSA*RPRACG
Trigger: GCCACAAGCACGAGGACGGCACGCAGAGTGACTCAG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAAAAGGTGGCCGAAGATaGCCTGGAGAGTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLKGGRR*PGEFRG
Trigger: TCCCCTGAACTCTCCAGGGCATCTTCGGCCACCTTT...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAAGAGGCGGCTGGGCTaGTCACTGTCCAGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGKRRLG*SLSSSG
Trigger: ACCGGAGCTGGACAGTGAGCAGCCCAGCCGCCTCTT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCCTGGAGGGGGCACCTaGAATGGCACCAACAACTCT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALPGGGT*NGTNNS
Trigger: AGAGTTGTTGGTGCCATTGCAGGTGCCCCCTCCAGG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACCAGGGCAAGTGCCCTaGCATCTCAGACAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSPGQVP*HLRQSQ
Trigger: CTGGGACTGTCTGAGATGGCAGGGCACTTGCCCTGG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGTGCCATGCACCCGGCTaGACCCAGGACCTTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLCHAPG*TQDLGS
Trigger: GCTTCCAAGGTCCTGGGTGCAGCCGGGTGCATGGCA...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTGGGCAACTGGGGCATaGAGGGGTGGGCAGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRWATGA*RGGQQP
Trigger: GGGCTGCTGCCCACCCCTGCATGCCCCAGTTGCCCA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGTGAACTTAAAACATTaGACAGCCACTGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPVNLKH*TATAEG
Trigger: CCCCTCGGCAGTGGCTGTGCAATGTTTTAAGTTCAC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACCGGCTGTGCAGAGCTaGCCAAGCTCCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEPAVQS*PSSCFL
Trigger: CAGGAAACAGGAGCTTGGCCAGCTCTGCACAGCCGG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCGGCTGTGCAGAGCTaGCCAAGCTCCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPAVQS*PSSCFL
Trigger: CAGGAAACAGGAGCTTGGCCAGCTCTGCACAGCCGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACAGCTGGCCCGCTGTaGGAAATTCCTCAGGGGCAG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALTAGPL*EIPQGQ
Trigger: CTGCCCCTGAGGAATTTCCCACAGCGGGCCAGCTGT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTGGCCTGGCCAGGTCTaGGGCCTAGATCAGGAACCT +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALWPGQV*GLDQEP
Trigger: AGGTTCCTGATCTAGGCCCCAGACCTGGCCAGGCCA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAACGTGGCACTCATCTTaGTGCTGGCTGGGCCCGTCT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGETWHSS*CWLGPS
Trigger: AGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGT...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCCCCCTTCTCCGGCCTaGGGTTCGAGGCCTCGCAGT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRPPSPA*GSRPRS
Trigger: ACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGGG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGGCTGCCTCTGTTCCTaGTCTCCGGTCCCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLGCLCS*SPVPLL
Trigger: GAGAAGGGGGACCGGAGACCAGGAACAGAGGCAGCC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGCGGGGTCTCCTTCGTaGGGATCTCGAAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALAGSPS*GSRSSW
Trigger: CCAGCTACTTCGAGATCCCCACGAAGGAGACCCCGC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCGGGGTCTCCTTCGTaGGGATCTCGAAGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEAGSPS*GSRSSW
Trigger: CCAGCTACTTCGAGATCCCCACGAAGGAGACCCCGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCCTCTGCATCCTTCGTaGGCATCTCGTGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPPLHPS*ASRVPA
Trigger: TGCCGGCACACGAGATGCCCACGAAGGATGCAGAGG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCCAGTCGGCCACCTTaGTCTCAGCCGACACCATCT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEASRPP*SQPTPS
Trigger: AGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCTGTGCGTGAAGGACTaGGAGCGCTTCTTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALLCVKD*ERFFRG
Trigger: ACCCCGAAAGAAGCGCTCCCAGTCCTTCACGCACAG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCTCTCCCGCAGACACTaGGCCATGAAGTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGLSRRH*AMKSWA
Trigger: GGCCCAGGACTTCATGGCCCAGTGTCTGCGGGAGAG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGCGCCTCGGTCTCGATaGTGTATGTCCCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPAPRSR*CMSLRH
Trigger: GTGACGCAGGGACATACACCATCGAGACCGAGGCGC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGTGGGGGACCACTGGCTaGCTCCTTAGTGAAGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWWGTTG*LLSEAL
Trigger: GAGAGCTTCACTAAGGAGCCAGCCAGTGGTCCCCCA...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAATGCAGCTGGCGGGGATaGCGACATCTCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGECSWRG*RHLLLC
Trigger: GCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCA...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTGCAGCTGGCGGGGATaGCGACATCTCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALCSWRG*RHLLLC
Trigger: GCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTGTGGCCACGCCTTATaGCTGAGCGCCGTACCGGCT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGCGHAL*LSAVPA
Trigger: AGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGCCGTCCTGCCCCGGTaGCCTCAGGGGTTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRAVLPR*PQGFRG
Trigger: ACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGCCCCTTCTGGGAGCTaGCTGAGCTACGGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLAPSGS*LSYGSA
Trigger: AGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAGGGGC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTGCGTCTGGCTCAGCCTaGCAATCTCCGCAATCTCTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAASGSA*QSPQSL
Trigger: CAGAGATTGCGGAGATTGCCAGGCTGAGCCAGACGC...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGTCCTTCACCAGCGTCTaGCTCAGCCTGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRSFTSV*LSLAIS
Trigger: GGAGATTGCCAGGCTGAGCCAGACGCTGGTGAAGGA...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGACATCGTGGATCTCCTaGGCTAGGATGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRTSWIS*ARMATS
Trigger: GGACGTGGCCATCCTAGCCCAGGAGATCCACGATGT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAATGGCCTGCGACAGCTaGGACACCGGGTTCAGCATC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSMACDS*DTGFSI
Trigger: GATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCAT...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCTGTGTTCTCACGGATaGCCTGCGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWLCSHG*PATAGT
Trigger: TGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGCTGTGTTCTCACGGATaGCCTGCGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRLCSHG*PATAGT
Trigger: TGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAG...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGGGGGCACCTGCAATaGCACCAACAACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGRGHLQ*HQQLFP
Trigger: AGGAAAGAGTTGTTGGTGCCATTGCAGGTGCCCCCT...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTGGCAGGTTAGTGCCTaGCGGAGCCAGTCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGWQVSA*RSQSGL
Trigger: CAGGCCTGACTGGCTCCGCCAGGCACTAACCTGCCA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACTCTCTTCCTCTGCCTaGCCGCAGGCCAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSLSSSA*PQASTK
Trigger: CTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGCCCACCTCCATGTTTaGCACCAAATGACCCCACAG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSAHLHV*HQMTPQ
Trigger: CTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGC...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCGTGTGCATGGGAGTTaGGGGGTGTCTGCACCTGTG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPRVHGS*GVSAPV
Trigger: CACAGGTGCAGACACCCCCCAACTCCCATGCACACG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGGCCAACGGGCTCTTTaGCTTAGAGGCTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALGQRAL*LRGSGN
Trigger: GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCCTCGTTCTCGGCGTTaGTCCTGGCTTCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGPRSRR*SWLPGP
Trigger: AGGACCTGGAAGCCAGGATCAACGCCGAGAACGAGG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAGCTCCTGTTTCCTGTaGGCAGGTCCAGGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGSSCFL*AGPGSH
Trigger: GTGGGAGCCTGGACCTGCTCACAGGAAACAGGAGCT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCATCAAACTCGATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWHQTRW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATCGAGTTTGATG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGTCGAAGAACTCGATaGCAAAGGCCTGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTRRRTR*QRPAGY
Trigger: ATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCTGCCGTCTGCACGATaGAACCATAAGGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSALPSAR*NHKGQA
Trigger: AGCCTGACCCTTATGGTTTCATCGTGCAGACGGCAG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTGCTGGGCATGTTGCTaGGGGAGGCGCTGTGGGCAG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRCWACC*GRRCGQ
Trigger: CTGCCCACAGCGCCTCCCTCAGCAACATGCCCAGCA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCAAACCCGGCTTCCAGTaGCTTTGGTCGTGCGCTCAC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPKPGFQ*LWSCAH
Trigger: GTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTGCCCACTTGAGGCCTaGTGGCGTGAAGCCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPCPLEA*WREAKR
Trigger: CCTTTTGGCTTCACGCCATCAGGCCTCAAGTGGGCA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTAGAACGAATGTACAGTaGACCCTCCGAGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSARTNVQ*TLREAR
Trigger: CCGGGCTTCTCGGAGGGTTCACTGTACATTCGTTCT...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTAGAACGAATGTACAGTaGACCCTCCGAGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALRTNVQ*TLREAR
Trigger: CCGGGCTTCTCGGAGGGTTCACTGTACATTCGTTCT...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAACTTCCAGCTGTTTCTaGACCCGCCTCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLTSSCF*TRLSSF
Trigger: GAAGGAACTGAGGCGGGTGCAGAAACAGCTGGAAGT...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATTGATGACGGCATGCTaGTTGTCCACGCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSLMTAC*LSTLRD
Trigger: GTCCCGCAGCGTGGACAAGCAGCATGCCGTCATCAA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCCCTTCACGCTCACCTaGAGCTGGCTGGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALPFTLT*SWLVYF
Trigger: AAAGTACACCAGCCAGCTGCAGGTGAGCGTGAAGGG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCCTTCACGCTCACCTaGAGCTGGCTGGTGTACTTT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPFTLT*SWLVYF
Trigger: AAAGTACACCAGCCAGCTGCAGGTGAGCGTGAAGGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGGCGTCAGGCAGCGTaGTACCATCGTCCTCACCCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGRQAA*YHRPHP
Trigger: GGGGTGAGGACGATGGTAGCACGCTGCCTGACGCCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATCCTCTGAGTCACTCTaGGTGCCGTCCTCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSSSESL*VPSSCL
Trigger: CAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCCTCCTGGGGGCTCCTaGGTCTGCTGTCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRPPGGS*VCCPVA
Trigger: AGCCACAGGACAGCAGACGCAGGAGCCCCCAGGAGG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAAGCACAACTCCACACTaGGGCCAGAGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSSTTPH*GQRSWC
Trigger: GCACCAGCTTCTCTGGCCGCAGTGTGGAGTTGTGCT...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAAGCACAACTCCACACTaGGGCCAGAGAAGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGESTTPH*GQRSWC
Trigger: GCACCAGCTTCTCTGGCCGCAGTGTGGAGTTGTGCT...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCCAGGGCAAGTGCCCTaGCATCTCAGACAGTCCCAG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLPGQVP*HLRQSQ
Trigger: CTGGGACTGTCTGAGATGGCAGGGCACTTGCCCTGG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCCCCTCACGGGGACATaGCCTGCAGTCCTCACGGTG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRPLTGT*PAVLTV
Trigger: CACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCACATTGCACAGCCACTaGCGAGGGGTGGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGTLHSH*RGVGRS
Trigger: GCTCCTTCCCACCCCTCGGCAGTGGCTGTGCAATGT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCCGGCTGTGCAGAGCTaGCCAAGCTCCTGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGPAVQS*PSSCFL
Trigger: CAGGAAACAGGAGCTTGGCCAGCTCTGCACAGCCGG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACCAGGAACCAGGACGTaGCACTCATCTTGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSPGTRT*HSSWCW
Trigger: CCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTGG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCGAGGCCTCGCAGTATaGTGTGTGTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGRGLAV*CVFRQC
Trigger: GCACTGCCGGAACACACACCATACTGCGAGGCCTCG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGCCAGTCGGCCACCTTaGTCTCAGCCGACACCATCT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGASRPP*SQPTPS
Trigger: AGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGAACACCCCAAAGACCTaGTCGATCATCTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWNTPKT*SIIFRA
Trigger: GGCCCGGAAGATGATCGACCAGGTCTTTGGGGTGTT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGACTGTCCAGCTCCGGTaGCCCAGGCCCACTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRTVQLR*PRPTPP
Trigger: AGGAGGAGTGGGCCTGGGCCACCGGAGCTGGACAGT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGCCGAAGAGGCGGCTaGGCTGCTCACTGTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGRRGG*AAHCPA
Trigger: AGCTGGACAGTGAGCAGCCCAGCCGCCTCTTCGGCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCGTCCAGGCCGTAGCTaGATGACCATTCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSARPGRS*MTILPL
Trigger: CAATGGGAGAATGGTCATCCAGCTACGGCCTGGACG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACATCAGGTGGGTGTCCTaGGAGTGGAAGTCCATGCGT +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNIRWVS*EWKSMR
Trigger: ACGCATGGACTTCCACTCCCAGGACACCCACCTGAT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGCAGGGGTTTCGTGGTTaGAGGCCATCACATCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRQGFRG*RPSHLS
Trigger: GCTCAGATGTGATGGCCTCCAACCACGAAACCCCTG...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGTGCTTCGGCCATGGTaGGCTTGCGGCTGGCACAGC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRVLRPW*ACGWHS
Trigger: GCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCAC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAATCCTTCACCAGCGTCTaGCTCAGCCTGGCAATCTCC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGESFTSV*LSLAIS
Trigger: GGAGATTGCCAGGCTGAGCCAGACGCTGGTGAAGGA...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTCTCCTGGGCTAGGATaGCCACGTCCTTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGSPGLG*PRPSPA
Trigger: CGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTCCCCAGCCACATCGTaGATCTCCTGGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPSPATS*ISWARM
Trigger: CATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATCCCCAGCCACATCGTaGATCTCCTGGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSSPATS*ISWARM
Trigger: CATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCCCGCCCACAGGGATATaGCACATGTGGGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALPPTGI*HMWGSS
Trigger: TGAAGACCCCCACATGTGCCATATCCCTGTGGGCGG...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGAGGGGGCACCTGCAATaGCACCAACAACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGRGHLQ*HQQLFP
Trigger: AGGAAAGAGTTGTTGGTGCCATTGCAGGTGCCCCCT...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGAGCCAGTCAGGCCTaGAGGGGGCACCTGCAATGG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGASQA*RGHLQW
Trigger: CCATTGCAGGTGCCCCCTCCAGGCCTGACTGGCTCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCAAGCTCAATGGGTTTaGCAACTGTGTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTQAQWV*QLCWHQ
Trigger: CTGGTGCCAACACAGTTGCCAAACCCATTGAGCTTG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGCAGCCCCAAGCTCAATaGGTTTGGCAACTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGQPQAQ*VWQLCW
Trigger: CCAACACAGTTGCCAAACCCATTGAGCTTGGGGCTG...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTACAGCCCCAAGCTCAATaGGTTTGGCAACTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLQPQAQ*VWQLCW
Trigger: CCAACACAGTTGCCAAACCCATTGAGCTTGGGGCTG...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGGCCAACGGGCTCTTTaGCTTAGAGGCTCCGGCAAC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLGQRAL*LRGSGN
Trigger: GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGGTGGGAAGGAGCCGTaGATGAAGCGTGACCACTTC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSGGKEP*MKRDHF
Trigger: GAAGTGGTCACGCTTCATCCACGGCTCCTTCCCACC...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGACTCCTCCTCAGAGGTaGACGTGTAATCCGAGCCCT +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRTPPQR*TCNPSP
Trigger: AGGGCTCGGATTACACGTCCACCTCTGAGGAGGAGT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTCACAAACGTCCCATTaGGGCTGCCCAGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALSQTSH*GCPGPS
Trigger: TGAAGGACCTGGGCAGCCTCAATGGGACGTTTGTGA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACTGTACTTTTCATGCTTaGGTGCCTCCTCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNCTFHA*VPPPGL
Trigger: GAGTCCCGGAGGAGGCACTCAAGCATGAAAAGTACA...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACATCAAACTCGATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSHQTRW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATCGAGTTTGATG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCCGGGGGCCCTTGGTaGGCGCCGACCCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPGGPW*APTPAP
Trigger: TGGAGCAGGGGTCGGCGCTCACCAAGGGCCCCCGGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCTGAGCGGGCCCTGCTaGAGGGCTGGCGGGGACCCG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLLSGPC*RAGGDP
Trigger: CGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGCACCTTCTGGAAGTTaGGGCTGGCCTCGGGGATGC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRAPSGS*GWPRGC
Trigger: GCATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCAGAACGAATGTACAGTaGACCCTCCGAGAAGCCCGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALRTNVQ*TLREAR
Trigger: CCGGGCTTCTCGGAGGGTTCACTGTACATTCGTTCT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCAGCCACAAGACCACCTaGGAACGAATGTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSHKTT*ERMYSE
Trigger: TTCACTGTACATTCGTTCTCAGGTGGTCTTGTGGCT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGACTTCCAGCTGTTTCTaGACCCGCCTCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWTSSCF*TRLSSF
Trigger: GAAGGAACTGAGGCGGGTGCAGAAACAGCTGGAAGT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCACTTCTGGTCCGGGATaGGCATGTCATTCACAAACG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSTSGPG*ACHSQT
Trigger: CGTTTGTGAATGACATGCGCATCCCGGACCAGAAGT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACTTTTCATGCTTGAGTaGCTCCTCCGGGACTCGGTG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGELFMLE*LLRDSV
Trigger: CACCGAGTCCCGGAGGAGGCACTCAAGCATGAAAAG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCTGGTGTACTTTTCATaGTTGAGTGCCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWLVYFS*LSASSG
Trigger: CCCGGAGGAGGCACTCAAGCATGAAAAGTACACCAG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTGTGTGTTCCGGCAGTaGCTCGCTCCTCTTGGGCGC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRCVFRQ*LAPLGR
Trigger: GCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCTCATCTTGCCAGGGCTaGAGTCATCAAACTCGATGG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSSSCQG*SHQTRW
Trigger: CCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGA...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGCAGGTCGCTCTTGGTaGTGTGGCGGTCATCCCCAG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRAGRSW*CGGHPQ
Trigger: CTGGGGATGACCGCCACAGCACCAAGAGCGACCTGC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAAGAGGCACCAAGCTCTaGTCACCTGCCATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSRGTKL*SPAMFP
Trigger: TGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCT...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACGACTCTCATACCATTaGCAGGCAGGGTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGERLSYH*QAGCGA
Trigger: AGCTCCACACCCTGCCTGGCAATGGTATGAGAGTCG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGATGACAAAGGCCTGCTaGTTATGTAGTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGMTKAC*LCSSSW
Trigger: CCAGGAGCTACTACATAACCAGCAGGCCTTTGTCAT...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTGGCCGAAGATGCCCTaGAGAGTTCAGGGGACTCCA +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGWPKMP*RVQGTP
Trigger: TGGAGTCCCCTGAACTCTCCAGGGCATCTTCGGCCA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACGTCCAGGCCGTAGCTaGATGACCATTCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGERPGRS*MTILPL
Trigger: CAATGGGAGAATGGTCATCCAGCTACGGCCTGGACG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCGTCCAGGCCGTAGCTaGATGACCATTCTCCCATTG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPRPGRS*MTILPL
Trigger: CAATGGGAGAATGGTCATCCAGCTACGGCCTGGACG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCATCAGGTGGGTGTCCTaGGAGTGGAAGTCCATGCGT +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPIRWVS*EWKSMR
Trigger: ACGCATGGACTTCCACTCCCAGGACACCCACCTGAT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAACAGGGGTTTCGTGGTTaGAGGCCATCACATCTGAGC +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEQGFRG*RPSHLS
Trigger: GCTCAGATGTGATGGCCTCCAACCACGAAACCCCTG...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAGCCTCAGGGGTTTCGTaGTTGGAGGCCATCACATCT +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEASGVS*LEAITS
Trigger: AGATGTGATGGCCTCCAACCACGAAACCCCTGAGGC...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGCGTGACAGCTTCTTaGCCTGCTCAGCAGCTGGCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGVTAS*PAQQLA
Trigger: GGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGTCCCCAGCCACATCGTaGATCTCCTGGGCTAGGATG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLSPATS*ISWARM
Trigger: CATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGA...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCTGTGTTCTCACGGATaGCCTGCGACAGCTGGGACA +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLLCSHG*PATAGT
Trigger: TGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGAGGGGGCACCTGCAATaGCACCAACAACTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRRGHLQ*HQQLFP
Trigger: AGGAAAGAGTTGTTGGTGCCATTGCAGGTGCCCCCT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCAGCCCCAAGCTCAATaGGTTTGGCAACTGTGTTGG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWQPQAQ*VWQLCW
Trigger: CCAACACAGTTGCCAAACCCATTGAGCTTGGGGCTG...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCAAAGGAGCTCAGTGTaGGGAGGAGCAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAQRSSV*GGAGTC
Trigger: ACAAGTTCCTGCTCCTCCCCACACTGAGCTCCTTTG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTGCGGGACTGTAGCATaGGCTCACACTCCTCACGCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRCGTVA*AHTPHA
Trigger: GGCGTGAGGAGTGTGAGCTCATGCTACAGTCCCGCA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTGTACTTTTCATGCTTaGGTGCCTCCTCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPCTFHA*VPPPGL
Trigger: GAGTCCCGGAGGAGGCACTCAAGCATGAAAAGTACA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTGTACTTTTCATGCTTaGGTGCCTCCTCCGGGACTC +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALCTFHA*VPPPGL
Trigger: GAGTCCCGGAGGAGGCACTCAAGCATGAAAAGTACA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTCGTCGAAGAACTCGATaGCAAAGGCCTGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: AAARWTGLAPPPYRQQALRRRTR*QRPAGY
Trigger: ATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACG...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCGGGACACCCACTTCTaGCCCCCAGGGGAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLRDTHF*PPGEPG
Trigger: GCCGGGCTCCCCTGGGGGTCAGAAGTGGGTGTCCCG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCCATTCTGGTCCCCAATaGAGAAAGAGGCGGGAGTTG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPHSGPQ*RKRREL
Trigger: CAACTCCCGCCTCTTTCTTCATTGGGGACCAGAATG...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCAGCCACAAGACCACCTaGGAACGAATGTACAGTGAA +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSSHKTT*ERMYSE
Trigger: TTCACTGTACATTCGTTCTCAGGTGGTCTTGTGGCT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGACTTCTGGTCCGGGATaGGCATGTCATTCACAAACG +
Preference number: 4 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRTSGPG*ACHSQT
Trigger: CGTTTGTGAATGACATGCGCATCCCGGACCAGAAGT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGAAAGGTGGCCGAAGATaGCCTGGAGAGTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLKGGRR*PGEFRG
Trigger: TCCCCTGAACTCTCCAGGGCATCTTCGGCCACCTTT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCTTAGTGAAGCTCTCTTaGCGGAGAAAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPLVKLS*RRKAGA
Trigger: TGCCCCAGCCTTTCTCCGGCAAGAGAGCTTCACTAA...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGATCTTCTCGGCAAGGTaGTCTGTGTTCTCACGGATG +
Preference number: 4 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWIFSAR*SVFSRM
Trigger: CATCCGTGAGAACACAGAGCACCTTGCCGAGAAGAT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAGCGTGACGTACTTCTaGTCCGGGATGCGCATGTCA +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGSVTYF*SGMRMS
Trigger: TGACATGCGCATCCCGGACCAGAAGTACGTCACGCT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCATGACAAAGGCCTGCTaGTTATGTAGTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSMTKAC*LCSSSW
Trigger: CCAGGAGCTACTACATAACCAGCAGGCCTTTGTCAT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCGTGCCTTGGTCAGCTaGGGGTCCGTGGGGGCGGGC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLRALVS*GSVGAG
Trigger: GCCCGCCCCCACGGACCCCCAGCTGACCAAGGCACG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGCGCCTCGGTCTCGATaGTGTATGTCCCTGCGTCAC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRAPRSR*CMSLRH
Trigger: GTGACGCAGGGACATACACCATCGAGACCGAGGCGC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCATCAGGTGGGTGTCCTaGGAGTGGAAGTCCATGCGT +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGIRWVS*EWKSMR
Trigger: ACGCATGGACTTCCACTCCCAGGACACCCACCTGAT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTGGTGGGCTTGCGGCTaGCACAGCACAACTCCACAC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRWWACG*HSTTPH
Trigger: GTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCAGCACAAAGGGTTATaGCAGGTTAGTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLQHKGL*QVSAWR
Trigger: CCGCCAGGCACTAACCTGCCATAACCCTTTGTGCTG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACCAAGCTCAATGGGTTTaGCAACTGTGTTGGCACCAG +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNQAQWV*QLCWHQ
Trigger: CTGGTGCCAACACAGTTGCCAAACCCATTGAGCTTG...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCACGTAAACATCAGGTaGGCCGCAGGCTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGHVNIR*AAGSEE
Trigger: TTCCTCTGAGCCTGCGGCCCACCTGATGTTTACGTG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGACTTCCAGCTGTTTCTaGACCCGCCTCAGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLTSSCF*TRLSSF
Trigger: GAAGGAACTGAGGCGGGTGCAGAAACAGCTGGAAGT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGCTGGTGTACTTTTCATaGTTGAGTGCCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLLVYFS*LSASSG
Trigger: CCCGGAGGAGGCACTCAAGCATGAAAAGTACACCAG...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCTGGTGTACTTTTCATaGTTGAGTGCCTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGLVYFS*LSASSG
Trigger: CCCGGAGGAGGCACTCAAGCATGAAAAGTACACCAG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACTCGATGACAAAGGCCTaGTGGTTATGTAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: STPTNHGQRALWLRGSGNSMTKA*WLCSSS
Trigger: GGAGCTACTACATAACCAGCAGGCCTTTGTCATCGA...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGGAGCCGTCGCCGCATaGGCACAGGCAGGGACCCCT +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLGAVAA*AQAGTP
Trigger: AGGGGTCCCTGCCTGTGCGCATGCGGCGACGGCTCC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCTTAGTGAAGCTCTCTTaGCGGAGAAAGGCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGLVKLS*RRKAGA
Trigger: TGCCCCAGCCTTTCTCCGGCAAGAGAGCTTCACTAA...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGCCTCGGGGATGCGCTaGACCAGCTCCTCCCGGGCA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLASGMR*TSSSRA
Trigger: TGCCCGGGAGGAGCTGGTGCAGCGCATCCCCGAGGC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGAAATCTTCTCGGCAAGGTaGTCTGTGTTCTCACGGATG +
Preference number: 4 (lower is better)
Translates to: VGGTRPQGYGTCGGLQGEIFSAR*SVFSRM
Trigger: CATCCGTGAGAACACAGAGCACCTTGCCGAGAAGAT...TTCTCCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCATCTTCTCGGCAAGGTaGTCTGTGTTCTCACGGATG +
Preference number: 4 (lower is better)
Translates to: SCELPETRLPVTLVVRSPIFSAR*SVFSRM
Trigger: CATCCGTGAGAACACAGAGCACCTTGCCGAGAAGAT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCCTGGAGGGGGCACCTaGAATGGCACCAACAACTCT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRPGGGT*NGTNNS
Trigger: AGAGTTGTTGGTGCCATTGCAGGTGCCCCCTCCAGG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCTGTGCGTGAAGGACTaGGAGCGCTTCTTTCGGGGT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRLCVKD*ERFFRG
Trigger: ACCCCGAAAGAAGCGCTCCCAGTCCTTCACGCACAG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACAGCGTCCCCATTCTaGTCCCCAATGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALTASPF*SPMKKE
Trigger: CTCTTTCTTCATTGGGGACCAGAATGGGGACGCTGT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGACATCGTGGATCTCCTaGGCTAGGATGGCCACGTCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRTSWIS*ARMATS
Trigger: GGACGTGGCCATCCTAGCCCAGGAGATCCACGATGT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCTGGGGGTCCCGCTTaGTCTGCCTCTGCAGCCGCA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPGGPA*SASAAA
Trigger: TGCGGCTGCAGAGGCAGATCAAGCGGGACCCCCAGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGCCACGCCTTATGGCTaGGCGCCGTACCGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLATPYG*APYRLS
Trigger: GGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCCCACCAGGAGGGCTaGCCATACAGGGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPHQEG*PYRGVR
Trigger: CCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCATCGATGACAAAGGCCTaGTGGTTATGTAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSSMTKA*WLCSSS
Trigger: GGAGCTACTACATAACCAGCAGGCCTTTGTCATCGA...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTCCCCGGACGGGCTGTaGGTGAAGGACTGGGAGCGC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLSPDGL*VKDWER
Trigger: GCGCTCCCAGTCCTTCACGCACAGCCCGTCCGGGGA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCAATCTCCGCAATCTCTaGCGTCTGCACGATGAAACC +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGNLRNL*RLHDET
Trigger: GGTTTCATCGTGCAGACGGCAGAGATTGCGGAGATT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGAATCTCCGCAATCTCTaGCGTCTGCACGATGAAACC +
Preference number: 4 (lower is better)
Translates to: VWCRPSCELPETRLPVTLNLRNL*RLHDET
Trigger: GGTTTCATCGTGCAGACGGCAGAGATTGCGGAGATT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCGACTCTCATACCATTaGCAGGCAGGGTGTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRRLSYH*QAGCGA
Trigger: AGCTCCACACCCTGCCTGGCAATGGTATGAGAGTCG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGAGCGTGACGTACTTCTaGTCCGGGATGCGCATGTCA +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRSVTYF*SGMRMS
Trigger: TGACATGCGCATCCCGGACCAGAAGTACGTCACGCT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGGCTCTCCCTGGCGCTaGGCGTCAGGCAGCGTGCTA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLGSPWR*ASGSVL
Trigger: TAGCACGCTGCCTGACGCCCAGCGCCAGGGAGAGCC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCATGACAAAGGCCTGCTaGTTATGTAGTAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: AKLRASGNPASSDFGRALMTKAC*LCSSSW
Trigger: CCAGGAGCTACTACATAACCAGCAGGCCTTTGTCAT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTGCCTGGACTGGGGCTaGGACACTGGGGCGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLCLDWG*DTGAVP
Trigger: AGGGACCGCCCCAGTGTCCCAGCCCCAGTCCAGGCA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGAACACCCCAAAGACCTaGTCGATCATCTTCCGGGCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRNTPKT*SIIFRA
Trigger: GGCCCGGAAGATGATCGACCAGGTCTTTGGGGTGTT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCACAGCGTCCCCATTCTaGTCCCCAATGAAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGTASPF*SPMKKE
Trigger: CTCTTTCTTCATTGGGGACCAGAATGGGGACGCTGT...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGCCGTCCTGCCCCGGTaGCCTCAGGGGTTTCGTGGT +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLAVLPR*PQGFRG
Trigger: ACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCCGCTTCCGGGGCATaGCCAGGATGTCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPASGA*PGCPGV
Trigger: CACGCCTGGACATCCTGGCCATGCCCCGGAAGCGGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGCTGGCGGGGACCCGTaGTGGTGGCTGTGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLAGGDP*WWLCWQ
Trigger: CTGCCAACACAGCCACCACCACGGGTCCCCGCCAGC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TCAGGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCACTGTCGTTCATGTTCTaGTCAAAGTCCCGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: SGGPQAQRNRTRTPNPSSLSFMF*SKSREF
Trigger: GAACTCTCGGGACTTTGACCAGAACATGAACGACAG...TGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGCCCACCTCCATGTTTaGCACCAAATGACCCCACAG +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRAHLHV*HQMTPQ
Trigger: CTGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCAGAAGGGCTGCCATaGACCCGGCTGCACCCAGGA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPEGLP*TRLHPG
Trigger: TCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGAAAACTTGGTGATATaGTCCTTGATCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPENLVI*SLIFIL
Trigger: CAAGATGAAGATCAAGGACCATATCACCAAGTTTTC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGAAAACTTGGTGATATaGTCCTTGATCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTENLVI*SLIFIL
Trigger: CAAGATGAAGATCAAGGACCATATCACCAAGTTTTC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGGCCACGCTCCTCACTaGGCCAATCCAGGGACCCTC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLGHAPH*ANPGTL
Trigger: GAGGGTCCCTGGATTGGCCCAGTGAGGAGCGTGGCC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGGGTGGACAGGCTGTTaGAGCGGGTCAAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLGWTGC*SGSRPA
Trigger: CGCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCAGCGTGGAGGCGCCTaGACTAGCCGTGTGCATGGG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLQRGGA*TSRVHG
Trigger: CCCATGCACACGGCTAGTCCAGGCGCCTCCACGCTG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCGTCGAAGAACTCGATaGCAAAGGCCTGCTGGTTAT +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRRRRTR*QRPAGY
Trigger: ATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCGGCCATGGTGGGCTTaGGGCTGGCACAGCACAACT +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLRPWWA*GWHSTT
Trigger: AGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTTCTCACGGATGGCCTaGGACAGCTGGGACACCGGG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLFSRMA*DSWDTG
Trigger: CCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGATGTCCCTGCGTCACTaGGGCTGTCGTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLMSLRH*GCRPPP
Trigger: AGGAGGAGGACGACAGCCTCAGTGACGCAGGGACAT...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCAGGATGTCCAGGCGTaGCAGCTTCTTGGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLQDVQA*QLLGLL
Trigger: GAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTCGATGACAAAGGCCTaGTGGTTATGTAGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRSMTKA*WLCSSS
Trigger: GGAGCTACTACATAACCAGCAGGCCTTTGTCATCGA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCGAGCTGCGGCCCCCTaGCTGGACTGGGGCTGGGAC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECRAAAP*LDWGWD
Trigger: GTCCCAGCCCCAGTCCAGGCAGGGGGCCGCAGCTCG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTGCCTCTCTGAGGACTaGTCACGGGCACTGACCAGG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLCLSED*SRALTR
Trigger: CCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTGCAGCTGGCGGGGATaGCGACATCTCCTTCTGTGC +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLCSWRG*RHLLLC
Trigger: GCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGGCCTGCTCAGCAGCTaGCCGGCCCACGGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECGLLSS*PAHGLR
Trigger: CCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCTGTCGTTCATGTTCTaGTCAAAGTCCCGAGAGTTC +
Preference number: 4 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRLSFMF*SKSREF
Trigger: GAACTCTCGGGACTTTGACCAGAACATGAACGACAG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTGTGCGGTAAGAGGCTaGCTCTGTTCCTGGTCTCCG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLCAVRG*LCSWSP
Trigger: CGGAGACCAGGAACAGAGGCAGCCTCTTACCGCACA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCCACGGGCTCAGGGTTaGCCAGGGACCCCCGCTCAC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECPRAQG*PGTPAH
Trigger: GTGAGCGGGGGTCCCTGGGCAACCCTGAGCCCGTGG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCCCCGCCAGAAGGGCTaGCATGCACCCGGCTGCACC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECPRQKG*HAPGCT
Trigger: GGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTAGCTGGGGATGGCGGTaGGGCCGCTGGTTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECSWGWR*GRWFPA
Trigger: CGCCGGAAACCAGCGGCCCCACCGCCATCCCCAGCT...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGTGGCTGTTGAGGTGTaGGAGCGTGTGTGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLVAVEV*ERVCLG
Trigger: CCCCAAACACACACGCTCCCACACCTCAACAGCCAC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGGCCAGGGGGTCCTCTaGGTCACTCTGCGTGCCGTC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECGQGVL*VTLRAV
Trigger: GACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGAAAGGTGGCCGAAGATaGCCTGGAGAGTTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLKGGRR*PGEFRG
Trigger: TCCCCTGAACTCTCCAGGGCATCTTCGGCCACCTTT...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGAGAGGCACCAAGCTCTaGTCACCTGCCATGTTCCCA +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLRGTKL*SPAMFP
Trigger: TGGGAACATGGCAGGTGAGCAGAGCTTGGTGCCTCT...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCGAAAACTTGGTGATATaGTCCTTGATCTTCATCTTG +
Preference number: 4 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGENLVI*SLIFIL
Trigger: CAAGATGAAGATCAAGGACCATATCACCAAGTTTTC...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGCCTGCGGCCCCTTCTaGGAGCTGGCTGAGCTACGG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECACGPF*ELAELR
Trigger: CCGTAGCTCAGCCAGCTCCCAGAAGGGGCCGCAGGC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTGGGCAGCAGCCCGGTaGACCGGGCTAGCACCTCCT +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECWAAAR*TGLAPP
Trigger: AGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGCCCA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGGATCCAACTCCTCCTaGCCGAAGAGGCGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECGSNSS*PKRRLG
Trigger: GCCCAGCCGCCTCTTCGGCCAGGAGGAGTTGGATCC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGAGGCCGCGTCTTGTTaGCCAGGGCGTCCTCACAGC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECEAASC*PGRPHS
Trigger: GCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCCAGTCTGGTCCAGGTaGGACACCCCCACGTCCACC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECPVWSR*DTPTST
Trigger: GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTCACCCACGCCAGTCTaGTCCAGGTGGGACACCCCC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECSPTPV*SRWDTP
Trigger: GGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCAAAGGAGCTCAGTGTaGGGAGGAGCAGGAACTTGT +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLQRSSV*GGAGTC
Trigger: ACAAGTTCCTGCTCCTCCCCACACTGAGCTCCTTTG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCTTCTGGGAGCTGGCTaGGCTACGGCTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECLLGAG*ATALLL
Trigger: GAGGAGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGTGAACTTAAAACATTaGACAGCCACTGCCGAGGGG +
Preference number: 4 (lower is better)
Translates to: KTKITVMKRRRGNALEGLVNLKH*TATAEG
Trigger: CCCCTCGGCAGTGGCTGTGCAATGTTTTAAGTTCAC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCCCTCGGGGTCTGAGTaGCTGTTGAGGTGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECPSGSE*LLRCGS
Trigger: GCTCCCACACCTCAACAGCCACTCAGACCCCGAGGG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTCCGGGACTCGGTGCTaGACACGCTCCAGCACATAC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECSGTRC*TRSSTY
Trigger: GTATGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCGAGGCCTCGCAGTATaGTGTGTGTTCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECRGLAV*CVFRQC
Trigger: GCACTGCCGGAACACACACCATACTGCGAGGCCTCG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCCTCTGCATCCTTCGTaGGCATCTCGTGTGCCGGCA +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECPLHPS*ASRVPA
Trigger: TGCCGGCACACGAGATGCCCACGAAGGATGCAGAGG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTCTCCTGGGCTAGGATaGCCACGTCCTTCACCAGCG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECSPGLG*PRPSPA
Trigger: CGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCTCTCTTCCTCTGCCTaGCCGCAGGCCAGCACAAAG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECLSSSA*PQASTK
Trigger: CTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTACCCACTGGCATCGCTaGGGCTGTCAGGATCCAACT +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECTHWHR*GCQDPT
Trigger: AGTTGGATCCTGACAGCCTCAGCGATGCCAGTGGGT...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTTGATGACGGCATGCTaGTTGTCCACGCTGCGGGAC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECLMTAC*LSTLRD
Trigger: GTCCCGCAGCGTGGACAAGCAGCATGCCGTCATCAA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCATCAAACTCGATGGTaGAGGAGGCGTGGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECHQTRW*RRRGSA
Trigger: TGCAGAGCCACGCCTCCTTCACCATCGAGTTTGATG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTTCTCCCATTGGCACTaGCATAGACGCCATCCCGTG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECFSHWH*HRRHPV
Trigger: CACGGGATGGCGTCTATGTCAGTGCCAATGGGAGAA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTCACGTAAACATCAGGTaGGCCGCAGGCTCAGAGGAA +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECHVNIR*AAGSEE
Trigger: TTCCTCTGAGCCTGCGGCCCACCTGATGTTTACGTG...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR TCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTATGTTTGGCACCAAATaGCCCCACAGTCGACCTCTC +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECMFGTK*PHSRPL
Trigger: GAGAGGTCGACTGTGGGGTCATTTGGTGCCAAACAT...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTACTTCTGGTCCGGGATaGGCATGTCATTCACAAACG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECTSGPG*ACHSQT
Trigger: CGTTTGTGAATGACATGCGCATCCCGGACCAGAAGT...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR GCA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTTCATCTTGCCAGGGCTaGAGTCATCAAACTCGATGG +
Preference number: 4 (lower is better)
Translates to: YKITIFRKTATRPPENECSSCQG*SHQTRW
Trigger: CCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGA...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCCCCTATCGGCCGGCGTaGGGCCACGGCGCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: RALTPARRAAMHPAAPRTPYRPA*GHGACR
Trigger: CCGACAAGCGCCGTGGCCCAACGCCGGCCGATAGGG...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCACGGCGCTTGTCGGCCTaGGGGTCCCCGGACGGGCTG +
Preference number: 5 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPRRLSA*GSPDGL
Trigger: CAGCCCGTCCGGGGACCCCAAGGCCGACAAGCGCCG...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp GGCTGTCAGCCCTCTCACTGGGCAGCTGAGGGAGCCGTCGCCGCATaGGCACAGGCAGGGACCCCTCCGGCTCCCCGCCTCTACGTCCCA +
Preference number: 5 (lower is better)
Translates to: GCQPSHWAAEGAVAA*AQAGTPPAPRLYVP
Trigger: TGGGACGTAGAGGCGGGGAGCCGGAGGGGTCCCTGCCTGTGCGCATGCGGCGACGGCTCCCTCAGCTGCCCAGTGAGAGGGCTGACAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GGGCCACGCTCCTCACTGGGCCAATCCAGGGACCCTCGGGGCCTGTaGCCACGCCTTATGGCTGAGCGCCGTACCGGCTCTCCACGGCCC +
Preference number: 5 (lower is better)
Translates to: GPRSSLGQSRDPRGL*PRLMAERRTGSPRP
Trigger: GGGCCGTGGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTCCCTGGATTGGCCCAGTGAGGAGCGTGGCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGCGGCCGAGGCCGCCTaGGCCAGGGGGTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPAAEAA*ARGSSE
Trigger: CTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGTTGGGCCACGGCGCTaGTCGGCCTTGGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPVGPRR*SALGSP
Trigger: CGGGGACCCCAAGGCCGACAAGCGCCGTGGCCCAAC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGTTGGGCCACGGCGCTaGTCGGCCTTGGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPVGPRR*SALGSP
Trigger: CGGGGACCCCAAGGCCGACAAGCGCCGTGGCCCAAC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp GGGCCAATCCAGGGACCCTCGGGGCCTGTGGCCACGCCTTATGGCTaGGCGCCGTACCGGCTCTCCACGGCCCATGTCCGTCGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: GPIQGPSGPVATPYG*APYRLSTAHVRRAK
Trigger: CTTGGCCCGACGGACATGGGCCGTGGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTCCCTGGATTGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp GAAGGAGGCGTGGCTCTGCACCACAGGGGCCGCTCCGCCCCCACCTaGCTCTGCATCCTTCGTGGGCATCTCGTGTGCCGGCACCTCGGG +
Preference number: 5 (lower is better)
Translates to: EGGVALHHRGRSAPT*LCILRGHLVCRHLG
Trigger: CCCGAGGTGCCGGCACACGAGATGCCCACGAAGGATGCAGAGGCAGGTGGGGGCGGAGCGGCCCCTGTGGTGCAGAGCCACGCCTCCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp CCAGCGGCCGAGGCCGCCTTGGCCAGGGGGTCCTCTGAGTCACTCTaGGTGCCGTCCTCGTGCTTGTGGCCCTTCAGGGTGCGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PAAEAALARGSSESL*VPSSCLWPFRVRVW
Trigger: CCACACCCGCACCCTGAAGGGCCACAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGCTGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CTCACGGGCACTGACCAGGGCGGTGCCTCCCGGGTCCTGTGCAGCTaGCGGGGATGGCGACATCTCCTTCTGTGCCCGCAGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: LTGTDQGGASRVLCS*RGWRHLLLCPQRLG
Trigger: CCCCAGCCTCTGCGGGCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGCACCGCCCTGGTCAGTGCCCGTGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CACTGGGCCAATCCAGGGACCCTCGGGGCCTGTGGCCACGCCTTATaGCTGAGCGCCGTACCGGCTCTCCACGGCCCATGTCCGTCGGGC +
Preference number: 5 (lower is better)
Translates to: HWANPGTLGACGHAL*LSAVPALHGPCPSG
Trigger: GCCCGACGGACATGGGCCGTGGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTCCCTGGATTGGCCCAGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCAGCCTTAGTCCCCGGCTaGGTCCCCGGCTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPALVPG*VPGLVP
Trigger: GGGGACCAAGCCGGGGACCAAGCCGGGGACTAAGGC...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCCGGCGCTTGTCGGCCTaGGGGTCCCCGGACGGGCTG +
Preference number: 5 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSRRLSA*GSPDGL
Trigger: CAGCCCGTCCGGGGACCCCAAGGCCGACAAGCGCCG...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCTATCGGCCGGCGTaGGGCCACGGCGCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTPYRPA*GHGACR
Trigger: CCGACAAGCGCCGTGGCCCAACGCCGGCCGATAGGG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGGGGTGGACAGGCTGTaGGAGCGGGTCAAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGGVDRL*ERVKAC
Trigger: GCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCCC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCCGAGGCCGCGTCTTGTaGGCCAGGGCGTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGRGRVL*ARASSQ
Trigger: CTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCG...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp CAAGGGCACCCCAGCGGCCGAGGCCGCCTTGGCCAGGGGGTCCTCTaGGTCACTCTGCGTGCCGTCCTCGTGCTTGTGGCCCTTCAGGGT +
Preference number: 5 (lower is better)
Translates to: QGHPSGRGRLGQGVL*VTLRAVLVLVALQG
Trigger: ACCCTGAAGGGCCACAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGCTGGGGTGCCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp GGCGCTCTGGGTAGGGCTCTCCCTGGCGCTGGGCGTCAGGCAGCGTaGTACCATCGTCCTCACCCCACCAGGAGGGCTGCCCATACAGGG +
Preference number: 5 (lower is better)
Translates to: GALGRALPGAGRQAA*YHRPHPTRRAAHTG
Trigger: CCCTGTATGGGCAGCCCTCCTGGTGGGGTGAGGACGATGGTAGCACGCTGCCTGACGCCCAGCGCCAGGGAGAGCCCTACCCAGAGCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS GCA 90 bp GGACTGCTCACGGGCACTGACCAGGGCGGTGCCTCCCGGGTCCTGTaGAGCTGGCGGGGATGGCGACATCTCCTTCTGTGCCCGCAGAGG +
Preference number: 5 (lower is better)
Translates to: GLLTGTDQGGASRVL*SWRGWRHLLLCPQR
Trigger: CCTCTGCGGGCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGCACCGCCCTGGTCAGTGCCCGTGAGCAGTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GGAGCCGGTGGCGGGCGCCGCTGCTGCTCACCAGGAACCAGGACGTaGCACTCATCTTGGTGCTGGCTGGGCCCGTCTGGCCCTGCTGTT +
Preference number: 5 (lower is better)
Translates to: GAGGGRRCCSPGTRT*HSSWCWLGPSGPAV
Trigger: AACAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTGGTGAGCAGCAGCGGCGCCCGCCACCGGCTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS CCA 90 bp GCCAGTCGGCCACCTTGGTCTCAGCCGACACCATCTCGCCAGGTGTaGCCTCCTTGCCCGGGGGCCGCCGCTGGCGCAGGGAAAACTTGG +
Preference number: 5 (lower is better)
Translates to: ASRPPWSQPTPSRQV*PPCPGAAAGAGKTW
Trigger: CCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp ACAGGCTGTTGGAGCGGGTCAAGGCCTGCGGCCCCTTCTGGGAGCTaGCTGAGCTACGGCTCTGCTCCTCCCGGGCAGCTGGGGATGGCG +
Preference number: 5 (lower is better)
Translates to: TGCWSGSRPAAPSGS*LSYGSAPPGQLGMA
Trigger: CGCCATCCCCAGCTGCCCGGGAGGAGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAGGGGCCGCAGGCCTTGACCCGCTCCAACAGCCTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CCCGCTTCCGGGGCATGGCCAGGATGTCCAGGCGTGACAGCTTCTTaGCCTGCTCAGCAGCTGGCCGGCCCACGGGCTCAGGGTTGCCCA +
Preference number: 5 (lower is better)
Translates to: PASGAWPGCPGVTAS*PAQQLAGPRAQGCP
Trigger: TGGGCAACCCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTGGCCATGCCCCGGAAGCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp AGGGCTGGCGGGGACCCGTGGTGGTGGCTGTGTTGGCAGCCTTCCTaGAGACAGCCCGTGCTTCGGCCATGGTGGGCTTGCGGCTGGCAC +
Preference number: 5 (lower is better)
Translates to: RAGGDPWWWLCWQPS*RQPVLRPWWACGWH
Trigger: GTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGGAAGGCTGCCAACACAGCCACCACCACGGGTCCCCGCCAGCCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGCCTTAGTCCCCGGCTaGGTCCCCGGCTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTALVPG*VPGLVP
Trigger: GGGGACCAAGCCGGGGACCAAGCCGGGGACTAAGGC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGCCTTAGTCCCCGGCTaGGTCCCCGGCTTGGTCCCC +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGALVPG*VPGLVP
Trigger: GGGGACCAAGCCGGGGACCAAGCCGGGGACTAAGGC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGACGTGGCACTCATCTaGGTGCTGGCTGGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: GRRVCGGRKAETHTHREADVALI*VLAGPV
Trigger: GACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTC...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CAA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCGACGTGGCACTCATCTaGGTGCTGGCTGGGCCCGTC +
Preference number: 5 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGDVALI*VLAGPV
Trigger: GACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTC...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CAA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGCGGCCGAGGCCGCCTaGGCCAGGGGGTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRAAEAA*ARGSSE
Trigger: CTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGCCCTATCGGCCGGCGTaGGGCCACGGCGCTTGTCGG +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGPYRPA*GHGACR
Trigger: CCGACAAGCGCCGTGGCCCAACGCCGGCCGATAGGG...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCGGGCTGGGCCCGCTCTaGCCACTACGCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTGLGPL*PLRRLT
Trigger: CGTCAGCCTGCGTAGTGGCAAGAGCGGGCCCAGCCC...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGGCTGGGCCCGCTCTaGCCACTACGCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGLGPL*PLRRLT
Trigger: CGTCAGCCTGCGTAGTGGCAAGAGCGGGCCCAGCCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCAGGGGTGGACAGGCTGTaGGAGCGGGTCAAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPGVDRL*ERVKAC
Trigger: GCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCCC...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTCCGAGGCCGCGTCTaGTTGGCCAGGGCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGFRGRV*LARASS
Trigger: TGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCGCTGCACCCAGGACCTaGGAAGCCCACCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: RALTPARRAAMHPAAPRTAAPRT*EAHLQR
Trigger: CCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTGCCGGCGCCTCGTGTaGGAGGTGTATCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: RQAGVRRTEGRDAHAQGGCRRLV*EVYRAL
Trigger: CAGTGCCCGATACACCTCCAACACGAGGCGCCGGCA...GCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp GGCCAAGTGGGTGATGCTGCCTCTCTGAGGACTGCTCACGGGCACTaGCCAGGGCGGTGCCTCCCGGGTCCTGTGCAGCTGGCGGGGATG +
Preference number: 5 (lower is better)
Translates to: GQVGDAASLRTAHGH*PGRCLPGPVQLAGM
Trigger: CATCCCCGCCAGCTGCACAGGACCCGGGAGGCACCGCCCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCACCCACTTGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp TCCACGGCCCATGTCCGTCGGGCCAAGTGGGTGATGCTGCCTCTCTaGGGACTGCTCACGGGCACTGACCAGGGCGGTGCCTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: STAHVRRAKWVMLPL*GLLTGTDQGGASRV
Trigger: GACCCGGGAGGCACCGCCCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGACGGACATGGGCCGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp CGCCGTACCGGCTCTCCACGGCCCATGTCCGTCGGGCCAAGTGGGTaGTGCTGCCTCTCTGAGGACTGCTCACGGGCACTGACCAGGGCG +
Preference number: 5 (lower is better)
Translates to: RRTGSPRPMSVGPSG*CCLSEDCSRALTRA
Trigger: CGCCCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGACGGACATGGGCCGTGGAGAGCCGGTACGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp GCCTCGTGTTGGAGGTGTATCGGGCACTGCCTGAGCGGGCCCTGCTaGAGGGCTGGCGGGGACCCGTGGTGGTGGCTGTGTTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: ASCWRCIGHCLSGPC*RAGGDPWWWLCWQP
Trigger: AGGCTGCCAACACAGCCACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATACACCTCCAACACGAGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp CGCCGCTGCTGCTCACCAGGAACCAGGACGTGGCACTCATCTTGGTaGTGGCTGGGCCCGTCTGGCCCTGCTGTTCGGGCTCGGTCTCCG +
Preference number: 5 (lower is better)
Translates to: RRCCSPGTRTWHSSW*WLGPSGPAVRARSP
Trigger: CGGAGACCGAGCCCGAACAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTGGTGAGCAGCAGCGGCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS GCA 90 bp TGTGGCCCTTCAGGGTGCGGGTGTGGACAGGCAGGTCGCTCTTGGTaGTGTGGCGGTCATCCCCAGGGCCAACCCGGTGCAGCAGGCTCG +
Preference number: 5 (lower is better)
Translates to: CGPSGCGCGQAGRSW*CGGHPQGQPGAAGS
Trigger: CGAGCCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCACCCTGAAGGGCCACA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp GCACAACTCCACACTGCGGCCAGAGAAGCTGGTGCGGGCAGGGGCTaGCTCGGGGTCACTAGTCCCTGTGAAGGAGCCGGCCCGCTTCCG +
Preference number: 5 (lower is better)
Translates to: AQLHTAAREAGAGRG*LGVTSPCEGAGPLP
Trigger: CGGAAGCGGGCCGGCTCCTTCACAGGGACTAGTGACCCCGAGGCAGCCCCTGCCCGCACCAGCTTCTCTGGCCGCAGTGTGGAGTTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp GCTCTGCTGGGTAGGGCTCTCCCTGGCGCTGGGCGTCAGGCAGCGTaGTACCATCGTCCTCACCCCACCAGGAGGGCTGCCCATACAGGG +
Preference number: 5 (lower is better)
Translates to: ALLGRALPGAGRQAA*YHRPHPTRRAAHTG
Trigger: CCCTGTATGGGCAGCCCTCCTGGTGGGGTGAGGACGATGGTAGCACGCTGCCTGACGCCCAGCGCCAGGGAGAGCCCTACCCAGCAGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453495.2
CDS CCA 90 bp GGGCGCCGCTGCTGCTCACCAGGAACCAGGACGTGGCACTCATCTTaGTGCTGGCTGGGCCCGTCTGGCCCTGCTGTTCGGGCTCGGTCT +
Preference number: 5 (lower is better)
Translates to: GRRCCSPGTRTWHSS*CWLGPSGPAVRARS
Trigger: AGACCGAGCCCGAACAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTGGTGAGCAGCAGCGGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS CCA 90 bp TCACACTCCTCACGCCCCACGAAGATGAGCTCCCGAGGGAGCCGGTaGCGGGCGCCGCTGCTGCTCACCAGGAACCAGGACGTGGCACTC +
Preference number: 5 (lower is better)
Translates to: SHSSRPTKMSSRGSR*RAPLLLTRNQDVAL
Trigger: GAGTGCCACGTCCTGGTTCCTGGTGAGCAGCAGCGGCGCCCGCCACCGGCTCCCTCGGGAGCTCATCTTCGTGGGGCGTGAGGAGTGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS CCA 90 bp CCCTTCAGGGTGCGGGTGTGGACAGGCAGGTCGCTCTTGGTGCTGTaGCGGTCATCCCCAGGGCCAACCCGGTGCAGCAGGCTCGGGTCA +
Preference number: 5 (lower is better)
Translates to: PFRVRVWTGRSLLVL*RSSPGPTRCSRLGS
Trigger: TGACCCGAGCCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCACCCTGAAGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GCTTGTGGCCCTTCAGGGTGCGGGTGTGGACAGGCAGGTCGCTCTTaGTGCTGTGGCGGTCATCCCCAGGGCCAACCCGGTGCAGCAGGC +
Preference number: 5 (lower is better)
Translates to: ACGPSGCGCGQAGRS*CCGGHPQGQPGAAG
Trigger: GCCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCACCCTGAAGGGCCACAAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GCCGCCAGGGCCGTCTCCGTCTCCTTCAAGATCAGGTGGGTGTCCTaGGAGTGGAAGTCCATGCGTGCGGCCCGGGTAGCGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: AARAVSVSFKIRWVS*EWKSMRAARVAARS
Trigger: GGACCTGGCCGCTACCCGGGCCGCACGCATGGACTTCCACTCCCAGGACACCCACCTGATCTTGAAGGAGACGGAGACGGCCCTGGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GCCTCCAGGGCCGCCAGGGCCGTCTCCGTCTCCTTCAAGATCAGGTaGGTGTCCTGGGAGTGGAAGTCCATGCGTGCGGCCCGGGTAGCG +
Preference number: 5 (lower is better)
Translates to: ASRAARAVSVSFKIR*VSWEWKSMRAARVA
Trigger: CGCTACCCGGGCCGCACGCATGGACTTCCACTCCCAGGACACCCACCTGATCTTGAAGGAGACGGAGACGGCCCTGGCGGCCCTGGAGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GTGGAGGTGTATCGGGCACTGCCTGAGCGGGCCCTGCTGAAGGGCTaGCGGGGACCCGTGGTGGTGGCTGTGTTGGCAGCCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: VEVYRALPERALLKG*RGPVVVAVLAAFLE
Trigger: CTCCAGGAAGGCTGCCAACACAGCCACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATACACCTCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414716.8
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGCGAGGCCGCGTCTTGTaGGCCAGGGCGTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGRGRVL*ARASSQ
Trigger: CTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCG...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGAGGCCGCGTCTTGTaGGCCAGGGCGTCCTCACAG +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTRGRVL*ARASSQ
Trigger: CTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCG...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACGGCTTCCAGTGACTTaGGTCGTGCGCTCACCCCCG +
Preference number: 5 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPRLPVT*VVRSPP
Trigger: CGGGGGTGAGCGCACGACCAAAGTCACTGGAAGCCG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp TCTGAGTGGTGGAGGTGTATCGGGCACTGCCTGAGCGGGCCCTGCTaGAGGGCTGGCGGGGACCCGTGGTGGTGGCTGTGTTGGCAGCCT +
Preference number: 5 (lower is better)
Translates to: SEWWRCIGHCLSGPC*RAGGDPWWWLCWQP
Trigger: AGGCTGCCAACACAGCCACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATACACCTCCACCACTCAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000414716.8
CDS GCA 90 bp AGGGCCGCCCTGGAGGCGCTGGCTCCTCTGAGTTCAGGGTCTGCCTaGTGGGAGCCACATACACGTGCACACGGGAGGGCTGCTCCACAG +
Preference number: 5 (lower is better)
Translates to: RAALEALAPLSSGSA*WEPHTRAHGRAAPQ
Trigger: CTGTGGAGCAGCCCTCCCGTGTGCACGTGTATGTGGCTCCCAGCAGGCAGACCCTGAACTCAGAGGAGCCAGCGCCTCCAGGGCGGCCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS GCA 90 bp AGGAAGGGCCGCCCTGGAGGCGCTGGCTCCTCTGAGTTCAGGGTCTaGCTGCTGGGAGCCACATACACGTGCACACGGGAGGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: RKGRPGGAGSSEFRV*LLGATYTCTREGCS
Trigger: GGAGCAGCCCTCCCGTGTGCACGTGTATGTGGCTCCCAGCAGGCAGACCCTGAACTCAGAGGAGCCAGCGCCTCCAGGGCGGCCCTTCCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS CCA 90 bp GCCGCCCTGGAGGCGCTGGCTCCTCTGAGTTCAGGGTCTGCCTGCTaGGAGCCACATACACGTGCACACGGGAGGGCTGCTCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: AALEALAPLSSGSAC*EPHTRAHGRAAPQV
Trigger: CACCTGTGGAGCAGCCCTCCCGTGTGCACGTGTATGTGGCTCCCAGCAGGCAGACCCTGAACTCAGAGGAGCCAGCGCCTCCAGGGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS CCA 90 bp TTGGAGGTGTATCGGGCACTGCCTGAGCGGGCCCTGCTGAAGGGCTaGCGGGGACCCGTGGTGGTGGCTGTGTTGGCAGCCTTCCTGGAG +
Preference number: 5 (lower is better)
Translates to: LEVYRALPERALLKG*RGPVVVAVLAAFLE
Trigger: CTCCAGGAAGGCTGCCAACACAGCCACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATACACCTCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGTTGGGCCACGGCGCTaGTCGGCCTTGGGGTCCCCG +
Preference number: 5 (lower is better)
Translates to: AKLRASGNPASSDFGRALVGPRR*SALGSP
Trigger: CGGGGACCCCAAGGCCGACAAGCGCCGTGGCCCAAC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAGGGGTGGACAGGCTGTaGGAGCGGGTCAAGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLGVDRL*ERVKAC
Trigger: GCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCCC...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGGGGGTGCTGGGCATGTaGCTGAGGGAGGCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGGVLGM*LREALW
Trigger: CCACAGCGCCTCCCTCAGCAACATGCCCAGCACCCC...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTCCGACTCTCATACCATaGCCAGGCAGGGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GRRVCGGRKAETHTHREAPTLIP*PGRVWS
Trigger: GCTCCACACCCTGCCTGGCAATGGTATGAGAGTCGG...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp CGGTCATCCCCAGGGCCAACCCGGTGCAGCAGGCTCGGGTCATTCTaGACCAGCCAGTCGGCCACCTTGGTCTCAGCCGACACCATCTCG +
Preference number: 5 (lower is better)
Translates to: RSSPGPTRCSRLGSF*TSQSATLVSADTIS
Trigger: CGAGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCTGCTGCACCGGGTTGGCCCTGGGGATGACCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp AGGTCGCTCTTGGTGCTGTGGCGGTCATCCCCAGGGCCAACCCGGTaGAGCAGGCTCGGGTCATTCTGCACCAGCCAGTCGGCCACCTTG +
Preference number: 5 (lower is better)
Translates to: RSLLVLWRSSPGPTR*SRLGSFCTSQSATL
Trigger: CAAGGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TCTCCGGTCCCCCTTCTCCGGCCTGGGGTTCGAGGCCTCGCAGTATaGTGTGTGTTCCGGCAGTGCCTCGCTCCTCTTGGGCGCCAAACC +
Preference number: 5 (lower is better)
Translates to: SPVPLLRPGVRGLAV*CVFRQCLAPLGRQT
Trigger: GGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGGGACCGGAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GGTGCAGCAGGCTCGGGTCATTCTGCACCAGCCAGTCGGCCACCTTaGTCTCAGCCGACACCATCTCGCCAGGTGTGGCCTCCTTGCCCG +
Preference number: 5 (lower is better)
Translates to: GAAGSGHSAPASRPP*SQPTPSRQVWPPCP
Trigger: CGGGCAAGGAGGCCACACCTGGCGAGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCTGCTGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TCCGACCCACTGGCATCGCTGAGGCTGTCAGGATCCAACTCCTCCTaGCCGAAGAGGCGGCTGGGCTGCTCACTGTCCAGCTCCGGTGGC +
Preference number: 5 (lower is better)
Translates to: SDPLASLRLSGSNSS*PKRRLGCSLSSSGG
Trigger: GCCACCGGAGCTGGACAGTGAGCAGCCCAGCCGCCTCTTCGGCCAGGAGGAGTTGGATCCTGACAGCCTCAGCGATGCCAGTGGGTCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CCTTCCTGGAGACAGCCCGTGCTTCGGCCATGGTGGGCTTGCGGCTaGCACAGCACAACTCCACACTGCGGCCAGAGAAGCTGGTGCGGG +
Preference number: 5 (lower is better)
Translates to: PSWRQPVLRPWWACG*HSTTPHCGQRSWCG
Trigger: CCCGCACCAGCTTCTCTGGCCGCAGTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGGAAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TGTGTTTGGGGGAGCCGTGGCGGGAGCCGTACTCCTCCTCAGAGGTaGACGTGTAATCCGAGCCCTGCTGCCGGCGCCTCGTGTTGGAGG +
Preference number: 5 (lower is better)
Translates to: CVWGSRGGSRTPPQR*TCNPSPAAGASCWR
Trigger: CCTCCAACACGAGGCGCCGGCAGCAGGGCTCGGATTACACGTCCACCTCTGAGGAGGAGTACGGCTCCCGCCACGGCTCCCCCAAACACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCAGCCAGTCGGCCACCTaGGTCTCAGCCGACACCATC +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSQSAT*VSADTI
Trigger: GATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTCTGTCTTCTCCCGCTaGAGCGAGCCGGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSVFSR*SEPALC
Trigger: ACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAGA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTCTGTCTTCTCCCGCTaGAGCGAGCCGGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGSVFSR*SEPALC
Trigger: ACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAGA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTCCTGTTTCCGTGCCTaGGTCAGCTGGGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSCFRA*VSWGSV
Trigger: CACGGACCCCCAGCTGACCAAGGCACGGAAACAGGA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACAGAAAGAGGCGGGAGTaGGCTCCCCGGGGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: STPTNHGQRALWLRGSGNRKRRE*APRGPL
Trigger: CAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCGGGCTGGGCCCGCTCTaGCCACTACGCAGGCTGACG +
Preference number: 5 (lower is better)
Translates to: SCELPETRLPVTLVVRSPGLGPL*PLRRLT
Trigger: CGTCAGCCTGCGTAGTGGCAAGAGCGGGCCCAGCCC...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGTGCGCTCACCCCCGCCAGAAGGGCTGCCATGCACCCGGCTGCACCCAGGACCTCAGGGGTTTCGTGGTaGGAGGCCATCACATCTGAG +
Preference number: 5 (lower is better)
Translates to: RALTPARRAAMHPAAPRTSGVSW*EAITSE
Trigger: CTCAGATGTGATGGCCTCCAACCACGAAACCCCTGA...GGTCCTGGGTGCAGCCGGGTGCATGGCAGCCCTTCTGGCGGGGGTGAGCGCACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGAGGCGTGACAGCTTCTaGGCCTGCTCAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGRRDSF*ACSAAG
Trigger: GCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCT...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCAGGCGTGACAGCTTCTaGGCCTGCTCAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTRRDSF*ACSAAG
Trigger: GCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGGGGGTGCTGGGCATGTaGCTGAGGGAGGCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRGVLGM*LREALW
Trigger: CCACAGCGCCTCCCTCAGCAACATGCCCAGCACCCC...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATTCCGAGGCCGCGTCTaGTTGGCCAGGGCGTCCTCA +
Preference number: 5 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLFRGRV*LARASS
Trigger: TGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCGCTGCACCCAGGACCTaGGAAGCCCACCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPAAPRT*EAHLQR
Trigger: CCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTGCCCCCATGCCCACTaGAGGCCTGATGGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTCPHAH*RPDGVK
Trigger: CTTCACGCCATCAGGCCTCAAGTGGGCATGGGGGCA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCGACTCTCATACCATaGCCAGGCAGGGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: GAHPRQSGPGGTPPRPPPPTLIP*PGRVWS
Trigger: GCTCCACACCCTGCCTGGCAATGGTATGAGAGTCGG...TGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp CGGCCTGGGGTTCGAGGCCTCGCAGTATGGTGTGTGTTCCGGCAGTaGCTCGCTCCTCTTGGGCGCCAAACCCTTCACGCTCACCTGCAG +
Preference number: 5 (lower is better)
Translates to: RPGVRGLAVWCVFRQ*LAPLGRQTLHAHLQ
Trigger: CTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTGCGAGGCCTCGAACCCCAGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp AAGGCCTGCTGGTTATGTAGTAGCTCCTGGGGGTCCCGCTTGATCTaGCTCTGCAGCCGCACCTGCTCCCCGCTGGCCTCCAAGGGCACC +
Preference number: 5 (lower is better)
Translates to: KACWLCSSSWGSRLI*LCSRTCSPLASKGT
Trigger: GGTGCCCTTGGAGGCCAGCGGGGAGCAGGTGCGGCTGCAGAGGCAGATCAAGCGGGACCCCCAGGAGCTACTACATAACCAGCAGGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp TGGCAGCCTTCCTGGAGACAGCCCGTGCTTCGGCCATGGTGGGCTTaGGGCTGGCACAGCACAACTCCACACTGCGGCCAGAGAAGCTGG +
Preference number: 5 (lower is better)
Translates to: WQPSWRQPVLRPWWA*GWHSTTPHCGQRSW
Trigger: CCAGCTTCTCTGGCCGCAGTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGGAAGGCTGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GAGAACCTAGCCGTCCTGCCCCGGTGGCCTCAGGGGTTTCGTGGTTaGAGGCCATCACATCTGAGCTGGGTAGGTGGGCGAGGACAGGGC +
Preference number: 5 (lower is better)
Translates to: ENLAVLPRWPQGFRG*RPSHLSWVGGRGQG
Trigger: GCCCTGTCCTCGCCCACCTACCCAGCTCAGATGTGATGGCCTCCAACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGCTAGGTTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CGGCGAGAACCTAGCCGTCCTGCCCCGGTGGCCTCAGGGGTTTCGTaGTTGGAGGCCATCACATCTGAGCTGGGTAGGTGGGCGAGGACA +
Preference number: 5 (lower is better)
Translates to: RREPSRPAPVASGVS*LEAITSELGRWART
Trigger: TGTCCTCGCCCACCTACCCAGCTCAGATGTGATGGCCTCCAACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGCTAGGTTCTCGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TGGCTGTGTTGGCAGCCTTCCTGGAGACAGCCCGTGCTTCGGCCATaGTGGGCTTGCGGCTGGCACAGCACAACTCCACACTGCGGCCAG +
Preference number: 5 (lower is better)
Translates to: WLCWQPSWRQPVLRP*WACGWHSTTPHCGQ
Trigger: CTGGCCGCAGTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGGAAGGCTGCCAACACAGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GCAGGCTCCGAGGAGCCCAGTGTGTCACCGTCCCCAGCCACATCGTaGATCTCCTGGGCTAGGATGGCCACGTCCTTCACCAGCGTCTGG +
Preference number: 5 (lower is better)
Translates to: AGSEEPSVSPSPATS*ISWARMATSFTSVW
Trigger: CCAGACGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGACGGTGACACACTGGGCTCCTCGGAGCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCATGACGGCATGCTGCTaGTCCACGCTGCGGGACTGT +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTMTACC*STLRDC
Trigger: ACAGTCCCGCAGCGTGGACAAGCAGCATGCCGTCAT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAAGCCAGTCGGCCACCTaGGTCTCAGCCGACACCATC +
Preference number: 5 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLSQSAT*VSADTI
Trigger: GATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCT...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCACAGGCAGGTCGCTCTaGGTGCTGTGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSTGRSL*VLWRSS
Trigger: GGATGACCGCCACAGCACCAAGAGCGACCTGCCTGT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGCGGCGCTTGTCGGCCTaGGGGTCCCCGGACGGGCTG +
Preference number: 5 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRRRLSA*GSPDGL
Trigger: CAGCCCGTCCGGGGACCCCAAGGCCGACAAGCGCCG...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTCCTGTTTCCGTGCCTaGGTCAGCTGGGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGSCFRA*VSWGSV
Trigger: CACGGACCCCCAGCTGACCAAGGCACGGAAACAGGA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCAGAAAGAGGCGGGAGTaGGCTCCCCGGGGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: SCELPETRLPVTLVVRSPRKRRE*APRGPL
Trigger: CAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCAGAAAGAGGCGGGAGTaGGCTCCCCGGGGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: AKLRASGNPASSDFGRALRKRRE*APRGPL
Trigger: CAAGGGCCCCCGGGGAGCCAACTCCCGCCTCTTTCT...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGAGGCGTGACAGCTTCTaGGCCTGCTCAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGRRDSF*ACSAAG
Trigger: GCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCT...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCAATGCCCTTGAGGGCTaGACCTTGGCAGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTNALEG*TLAAAW
Trigger: CCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCATT...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGGGTCTGAGTGGCTGTaGAGGTGTGGGAGCGTGTGT +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGGSEWL*RCGSVC
Trigger: ACACACGCTCCCACACCTCAACAGCCACTCAGACCC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGATGACGGCATGCTGCTaGTCCACGCTGCGGGACTGC +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGMTACC*STLRDC
Trigger: GCAGTCCCGCAGCGTGGACAAGCAGCATGCCGTCAT...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556508.5
CDS CCA 90 bp AAGAGGCTGCCTCTGTTCCTGGTCTCCGGTCCCCCTTCTCCGGCCTaGGGTTCGAGGCCTCGCAGTATGGTGTGTGTTCCGGCAGTGCCT +
Preference number: 5 (lower is better)
Translates to: KRLPLFLVSGPPSPA*GSRPRSMVCVPAVP
Trigger: AGGCACTGCCGGAACACACACCATACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGGGACCGGAGACCAGGAACAGAGGCAGCCTCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CTGTGTTGGCAGCCTTCCTGGAGACAGCCCGTGCTTCGGCCATGGTaGGCTTGCGGCTGGCACAGCACAACTCCACACTGCGGCCAGAGA +
Preference number: 5 (lower is better)
Translates to: LCWQPSWRQPVLRPW*ACGWHSTTPHCGQR
Trigger: TCTCTGGCCGCAGTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGGCTGTCTCCAGGAAGGCTGCCAACACAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GAGGAGCCCAGTGTGTCACCGTCCCCAGCCACATCGTGGATCTCCTaGGCTAGGATGGCCACGTCCTTCACCAGCGTCTGGCTCAGCCTG +
Preference number: 5 (lower is better)
Translates to: EEPSVSPSPATSWIS*ARMATSFTSVWLSL
Trigger: CAGGCTGAGCCAGACGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGACGGTGACACACTGGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TTCTGGTCAAAGTCCCGAGAGTTCAGCGAGCCGGGCGGCACCTTCTaGAAGTTGAGGCTGGCCTCGGGGATGCGCTGCACCAGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: FWSKSREFSEPGGTF*KLRLASGMRCTSSS
Trigger: GGAGGAGCTGGTGCAGCGCATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGCCGCCCGGCTCGCTGAACTCTCGGGACTTTGACCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAACCTCGTTCTCGGCGTaGATCCTGGCTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLTSFSA*ILASRS
Trigger: GGACCTGGAAGCCAGGATCAACGCCGAGAACGAGGT...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp ACAGAGGCCCATAGCCCCTCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCATGACGGCATGCTGCTaGTCCACGCTGCGGGACTGT +
Preference number: 5 (lower is better)
Translates to: TEAHSPSRGHALQSSRCSMTACC*STLRDC
Trigger: ACAGTCCCGCAGCGTGGACAAGCAGCATGCCGTCAT...GCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGAGGGGCTATGGGCCTCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS-3UTR CAA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACAGTGCCTCGCTCCTCTaGGGCGCCAAACCCTTCACG +
Preference number: 5 (lower is better)
Translates to: STPTNHGQRALWLRGSGNSASLL*GAKPFT
Trigger: CGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTAGTGCCTCGCTCCTCTaGGGCGCCAAACCCTTCACG +
Preference number: 5 (lower is better)
Translates to: AAARWTGLAPPPYRQQALSASLL*GAKPFT
Trigger: CGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACT...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGTCTGTCTTCTCCCGCTaGAGCGAGCCGGCCCTCTGT +
Preference number: 5 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRSVFSR*SEPALC
Trigger: ACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAGA...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTCCTGTTTCCGTGCCTaGGTCAGCTGGGGGTCCGTG +
Preference number: 5 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSASCFRA*VSWGSV
Trigger: CACGGACCCCCAGCTGACCAAGGCACGGAAACAGGA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGGGGTGCTGGGCATGTaGCTGAGGGAGGCGCTGTGG +
Preference number: 5 (lower is better)
Translates to: VWCRPSCELPETRLPVTLGVLGM*LREALW
Trigger: CCACAGCGCCTCCCTCAGCAACATGCCCAGCACCCC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGCACCTTCTGGAAGTaGAGGCTGGCCTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: AAARWTGLAPPPYRQQALGTFWK*RLASGM
Trigger: CATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGCC...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCAGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTTGCCCCCATGCCCACTaGAGGCCTGATGGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: AAARWTGLAPPPYRQQALCPHAH*RPDGVK
Trigger: CTTCACGCCATCAGGCCTCAAGTGGGCATGGGGGCA...AAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp CCGTGTCCTGCGCCTCGGTCTCGATGGTGTATGTCCCTGCGTCACTaGGGCTGTCGTCCTCCTCCTGTTTCCGTGCCTTGGTCAGCTGGG +
Preference number: 5 (lower is better)
Translates to: PCPAPRSRWCMSLRH*GCRPPPVSVPWSAG
Trigger: CCCAGCTGACCAAGGCACGGAAACAGGAGGAGGACGACAGCCTCAGTGACGCAGGGACATACACCATCGAGACCGAGGCGCAGGACACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TCAGGGGTTTCGTGGTTGGAGGCCATCACATCTGAGCTGGGTAGGTaGGCGAGGACAGGGCCACGCTCCTCACTGGGCCAATCCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SGVSWLEAITSELGR*ARTGPRSSLGQSRD
Trigger: GTCCCTGGATTGGCCCAGTGAGGAGCGTGGCCCTGTCCTCGCCCACCTACCCAGCTCAGATGTGATGGCCTCCAACCACGAAACCCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACACCTCGTTCTCGGCGTaGATCCTGGCTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: STPTNHGQRALWLRGSGNTSFSA*ILASRS
Trigger: GGACCTGGAAGCCAGGATCAACGCCGAGAACGAGGT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGTTCACAAACGTCCCATaGAGGCTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGCCTCAATGGGACGTTTGTGAA...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCAGCCAGTCGGCCACCTaGGTCTCAGCCGACACCATC +
Preference number: 5 (lower is better)
Translates to: SCELPETRLPVTLVVRSPSQSAT*VSADTI
Trigger: GATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCACAGGCAGGTCGCTCTaGGTGCTGTGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: SCELPETRLPVTLVVRSPTGRSL*VLWRSS
Trigger: GGATGACCGCCACAGCACCAAGAGCGACCTGCCTGT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTCAGGGGTTTCGTGGTaGGAGGCCATCACATCTGAG +
Preference number: 5 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPSGVSW*EAITSE
Trigger: CTCAGATGTGATGGCCTCCAACCACGAAACCCCTGA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGAATGCCCTTGAGGGCTaGACCTTGGCAGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRNALEG*TLAAAW
Trigger: CCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCATT...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCTGCCCACCTCCATGTTaGGCACCAAATGACCCCACA +
Preference number: 5 (lower is better)
Translates to: CGAHPRQSGPGGTPPRPPCPPPC*APNDPT
Trigger: TGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGCA...GGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGCAGGCGGGTGTGCGGCGGACGGAAGGCAGAGACGCACACGCACAGGGAGGCTTGTGAACTTAAAACATaGCACAGCCACTGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GRRVCGGRKAETHTHREACELKT*HSHCRG
Trigger: CCCTCGGCAGTGGCTGTGCAATGTTTTAAGTTCACA...AGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCCGTCCGCCGCACACCCGCCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGTGCCGGCGCCTCGTGTaGGAGGTGTATCGGGCACTG +
Preference number: 5 (lower is better)
Translates to: VWCRPSCELPETRLPVTLCRRLV*EVYRAL
Trigger: CAGTGCCCGATACACCTCCAACACGAGGCGCCGGCA...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp ATCCCAGCCCACCTGGGCCTAAGGGGGAAACTGAGGCCTGATGCATaGAGGGCACCAAAGTCCCATCTGTGCCTGACACTCGGCGGTGGG +
Preference number: 5 (lower is better)
Translates to: IPAHLGLRGKLRPDA*RAPKSHLCLTLGGG
Trigger: CCCACCGCCGAGTGTCAGGCACAGATGGGACTTTGGTGCCCTTCATGCATCAGGCCTCAGTTTCCCCCTTAGGCCCAGGTGGGCTGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS GCA 90 bp GGCAGTGCCTCGCTCCTCTTGGGCGCCAAACCCTTCACGCTCACCTaGAGCTGGCTGGTGTACTTTTCATGCTTGAGTGCCTCCTCCGGG +
Preference number: 5 (lower is better)
Translates to: GSASLLLGAKPFTLT*SWLVYFSCLSASSG
Trigger: CCCGGAGGAGGCACTCAAGCATGAAAAGTACACCAGCCAGCTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp AGGCCTCGCAGTATGGTGTGTGTTCCGGCAGTGCCTCGCTCCTCTTaGGCGCCAAACCCTTCACGCTCACCTGCAGCTGGCTGGTGTACT +
Preference number: 5 (lower is better)
Translates to: RPRSMVCVPAVPRSS*APNPSRSPAAGWCT
Trigger: AGTACACCAGCCAGCTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTGCGAGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp CGCGTCTTGTTGGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTCTaGTCAAAGTCCCGAGAGTTCAGCGAGCCGGGCGGCACCTTCTGG +
Preference number: 5 (lower is better)
Translates to: RVLLARASSQLSFMF*SKSREFSEPGGTFW
Trigger: CCAGAAGGTGCCGCCCGGCTCGCTGAACTCTCGGGACTTTGACCAGAACATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTTCACAAACGTCCCATaGAGGCTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGCCTCAATGGGACGTTTGTGAA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGGCGTGGGAGGCACCCGCCCACAGGGATATGGCACATGTGGGGGTCTTCAGGGGTGTACTTTTCATGCTaGAGTGCCTCCTCCGGGACT +
Preference number: 5 (lower is better)
Translates to: GRGRHPPTGIWHMWGSSGVYFSC*SASSGT
Trigger: AGTCCCGGAGGAGGCACTCAAGCATGAAAAGTACAC...CCCTGAAGACCCCCACATGTGCCATATCCCTGTGGGCGGGTGCCTCCCACGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATCCTTGATCTTCATCTaGCCAGGGCTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPSLIFI*PGLQSS
Trigger: TGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCCCCACCATGGCGCAGGGAAAACTaGGTGATATGGTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: AHPRQSGPGGTPPRPPPPWRREN*VIWSLI
Trigger: GATCAAGGACCATATCACCAAGTTTTCCCTGCGCCA...TGGTGGGGGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGACAGGCAGGTCGCTCTaGGTGCTGTGGCGGTCATCC +
Preference number: 5 (lower is better)
Translates to: VWCRPSCELPETRLPVTLTGRSL*VLWRSS
Trigger: GGATGACCGCCACAGCACCAAGAGCGACCTGCCTGT...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGTGCCGTCCTCGTGCTaGTGGCCCTTCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRVPSSC*WPFRVR
Trigger: CCGCACCCTGAAGGGCCACAAGCACGAGGACGGCAC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGGCACCTTCTGGAAGTaGAGGCTGGCCTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: VWCRPSCELPETRLPVTLGTFWK*RLASGM
Trigger: CATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGCC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGTGCAGGCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGCTGCACCCAGGACCTaGGAAGCCCACCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: VWCRPSCELPETRLPVTLAAPRT*EAHLQR
Trigger: CCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC...CAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGCCTGCACCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GACACCATCTCGCCAGGTGTGGCCTCCTTGCCCGGGGGCCGCCGCTaGCGCAGGGAAAACTTGGTGATATGGTCCTTGATCTTCATCTTG +
Preference number: 5 (lower is better)
Translates to: DTISPGVASLPGGRR*RRENLVIWSLIFIL
Trigger: CAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGGTGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTTCACAAACGTCCCATaGAGGCTGCCCAGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAFTNVP*RLPRSF
Trigger: GAAGGACCTGGGCAGCCTCAATGGGACGTTTGTGAA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GTGTGGAGCTCACCCACGCCAGTCTGGTCCAGGTGGGACACCCCCACGTCCACCTCCTTGATCTTCATCTaGCCAGGGCTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: VWSSPTPVWSRWDTPTSTSLIFI*PGLQSS
Trigger: TGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGA...GGTGGACGTGGGGGTGTCCCACCTGGACCAGACTGGCGTGGGTGAGCTCCACAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGCCCACCTCCATGTTaGGCACCAAATGACCCCACA +
Preference number: 5 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSACPPPC*APNDPT
Trigger: TGTGGGGTCATTTGGTGCCAAACATGGAGGTGGGCA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTAGGGTCCACGATGGCATaGATAACTTCCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLGSTMA*ITSSCF
Trigger: GAAACAGCTGGAAGTTATCAATGCCATCGTGGACCC...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGAGTGCCTCGCTCCTCTaGGGCGCCAAACCCTTCACG +
Preference number: 5 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRSASLL*GAKPFT
Trigger: CGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACT...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCTGCACCCAGGACCTTGGAAGCCCACCTACAGAGGCCCATAGCCCCTCACGGGTCCTTGATCTTCATCTaGCCAGGGCTGCAGTCATCA +
Preference number: 5 (lower is better)
Translates to: AAPRTLEAHLQRPIAPHGSLIFI*PGLQSS
Trigger: TGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGA...CCCGTGAGGGGCTATGGGCCTCTGTAGGTGGGCTTCCAAGGTCCTGGGTGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCACGGGGACATGCCCTGCAGTCCTCACGGTGCAGCGTGGAGGCGCCTGGACTATGGCGCAGGGAAAACTaGGTGATATGGTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: SRGHALQSSRCSVEAPGLWRREN*VIWSLI
Trigger: GATCAAGGACCATATCACCAAGTTTTCCCTGCGCCA...TAGTCCAGGCGCCTCCACGCTGCACCGTGAGGACTGCAGGGCATGTCCCCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCTCAGGGGTTTCGTGGTaGGAGGCCATCACATCTGAG +
Preference number: 5 (lower is better)
Translates to: AKLRASGNPASSDFGRALSGVSW*EAITSE
Trigger: CTCAGATGTGATGGCCTCCAACCACGAAACCCCTGA...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTCCAAGCTCAATGGGTTaGGCAACTGTGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSAPSSMG*ATVLAP
Trigger: TGGTGCCAACACAGTTGCCAAACCCATTGAGCTTGG...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGTGCCCCCATGCCCACTaGAGGCCTGATGGCGTGAAG +
Preference number: 5 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRCPHAH*RPDGVK
Trigger: CTTCACGCCATCAGGCCTCAAGTGGGCATGGGGGCA...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp TCTGGCTCAGCCTGGCAATCTCCGCAATCTCTGCCGTCTGCACGATaGAACCATAAGGGTCAGGCTCCTCCTCATCGTCGTCCGTGTCCC +
Preference number: 5 (lower is better)
Translates to: SGSAWQSPQSLPSAR*NHKGQAPPHRRPCP
Trigger: GGGACACGGACGACGATGAGGAGGAGCCTGACCCTTATGGTTTCATCGTGCAGACGGCAGAGATTGCGGAGATTGCCAGGCTGAGCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TCCTTGCCCGGGGGCCGCCGCTGGCGCAGGGAAAACTTGGTGATATaGTCCTTGATCTTCATCTTGCCAGGGCTGCAGTCATCAAACTCG +
Preference number: 5 (lower is better)
Translates to: SLPGGRRWRRENLVI*SLIFILPGLQSSNS
Trigger: CGAGTTTGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCACCCAAGCGGATGACATCGTaGAGCTTCAGCGTGACGTAC +
Preference number: 5 (lower is better)
Translates to: SCELPETRLPVTLVVRSPKRMTS*SFSVTY
Trigger: GTACGTCACGCTGAAGCTCAACGATGTCATCCGCTT...GGGTGAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GCCAAGCTGCGAGCTTCCGGAAACCCGGCTTCCAGTGACTTTGGTCGTGCGCTCGTGTACTTTTCATGCTaGAGTGCCTCCTCCGGGACT +
Preference number: 5 (lower is better)
Translates to: AKLRASGNPASSDFGRALVYFSC*SASSGT
Trigger: AGTCCCGGAGGAGGCACTCAAGCATGAAAAGTACAC...GAGCGCACGACCAAAGTCACTGGAAGCCGGGTTTCCGGAAGCTCGCAGCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCCCCAGCAGCTGGCCCTGTCCAGGTCCGACTCTCATACCATTGCCAGGCAGGTGGCGCAGGGAAAACTaGGTGATATGGTCCTTGATC +
Preference number: 5 (lower is better)
Translates to: SPSSWPCPGPTLIPLPGRWRREN*VIWSLI
Trigger: GATCAAGGACCATATCACCAAGTTTTCCCTGCGCCA...CCTGCCTGGCAATGGTATGAGAGTCGGACCTGGACAGGGCCAGCTGCTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp GGTGGGCCGCAGGCTCAGAGGAACAGAACCCGTACACCCAACCCCAGCTCAGCTTGTGAACTTAAAACATaGCACAGCCACTGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: GGPQAQRNRTRTPNPSSACELKT*HSHCRG
Trigger: CCCTCGGCAGTGGCTGTGCAATGTTTTAAGTTCACA...AGCTGAGCTGGGGTTGGGTGTACGGGTTCTGTTCCTCTGAGCCTGCGGCCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 90 bp ACTGGGAGCGCTTCTTTCGGGGTGTGTCCTCGTCGAAGAACTCGATaGCAAAGGCCTGCTGGTTATGTAGTAGCTCCTGGGGGTCCCGCT +
Preference number: 5 (lower is better)
Translates to: TGSASFGVCPRRRTR*QRPAGYVVAPGGPA
Trigger: AGCGGGACCCCCAGGAGCTACTACATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACGAGGACACACCCCGAAAGAAGCGCTCCCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp ACAGTCGACCTCTCTTCCTCTGCCTGGCCGCAGGCCAGCACAAAGGGTTATGGCCCAAGCTCAATGGGTTaGGCAACTGTGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: TVDLSSSAWPQASTKGYGPSSMG*ATVLAP
Trigger: TGGTGCCAACACAGTTGCCAAACCCATTGAGCTTGG...GCCATAACCCTTTGTGCTGGCCTGCGGCCAGGCAGAGGAAGAGAGGTCGACTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TTTCGGGGTGTGTCCTCGTCGAAGAACTCGATGACAAAGGCCTGCTaGTTATGTAGTAGCTCCTGGGGGTCCCGCTTGATCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: FRGVSSSKNSMTKAC*LCSSSWGSRLICLC
Trigger: GCAGAGGCAGATCAAGCGGGACCCCCAGGAGCTACTACATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACGAGGACACACCCCGAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp GGTTATCGAAGATCACCTCCTCTCGGTTCCGAGGCCGCGTCTTGTTaGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTCTGGTCAAAGT +
Preference number: 5 (lower is better)
Translates to: GYRRSPPLGSEAASC*PGRPHSCRSCSGQS
Trigger: ACTTTGACCAGAACATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAACCGAGAGGAGGTGATCTTCGATAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp TTCTCGGCAAGGTGCTCTGTGTTCTCACGGATGGCCTGCGACAGCTaGGACACCGGGTTCAGCATCAGGTTATCGAAGATCACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: FSARCSVFSRMACDS*DTGFSIRLSKITSS
Trigger: AGAGGAGGTGATCTTCGATAACCTGATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAGAGCACCTTGCCGAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp TTCTTTCGGGGTGTGTCCTCGTCGAAGAACTCGATGACAAAGGCCTaGTGGTTATGTAGTAGCTCCTGGGGGTCCCGCTTGATCTGCCTC +
Preference number: 5 (lower is better)
Translates to: FFRGVSSSKNSMTKA*WLCSSSWGSRLICL
Trigger: GAGGCAGATCAAGCGGGACCCCCAGGAGCTACTACATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACGAGGACACACCCCGAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 90 bp AGAGGATCTTCATCTTCTCGGCAAGGTGCTCTGTGTTCTCACGGATaGCCTGCGACAGCTGGGACACCGGGTTCAGCATCAGGTTATCGA +
Preference number: 5 (lower is better)
Translates to: RGSSSSRQGALCSHG*PATAGTPGSASGYR
Trigger: TCGATAACCTGATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAGAGCACCTTGCCGAGAAGATGAAGATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AGCAGCCCGGTGGACCGGGCTAGCACCTCCTCCATACAGACAGCAGGCTCTTGGATGGAGCTGATTTCCTaGTTAGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: SSPVDRASTSSIQTAGSWMELIS*LDVFRM
Trigger: CATCCTGAAGACATCTAACAAGGAAATCAGCTCCAT...CCAAGAGCCTGCTGTCTGTATGGAGGAGGTGCTAGCCCGGTCCACCGGGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TCCACCCCCACCAACCACGGCCAACGGGCTCTTTGGCTTAGAGGCTCCGGCAACATGGAGCTGATTTCCTaGTTAGATGTCTTCAGGATG +
Preference number: 5 (lower is better)
Translates to: STPTNHGQRALWLRGSGNMELIS*LDVFRM
Trigger: CATCCTGAAGACATCTAACAAGGAAATCAGCTCCAT...GTTGCCGGAGCCTCTAAGCCAAAGAGCCCGTTGGCCGTGGTTGGTGGGGGTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCGGCTTCCAGTGACTTaGGTCGTGCGCTCACCCCCG +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLRLPVT*VVRSPP
Trigger: CGGGGGTGAGCGCACGACCAAAGTCACTGGAAGCCG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 90 bp ATCTTCATCTTCTCGGCAAGGTGCTCTGTGTTCTCACGGATGGCCTaGGACAGCTGGGACACCGGGTTCAGCATCAGGTTATCGAAGATC +
Preference number: 5 (lower is better)
Translates to: IFIFSARCSVFSRMA*DSWDTGFSIRLSKI
Trigger: GATCTTCGATAACCTGATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAGAGCACCTTGCCGAGAAGATGAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp CGAATGTACAGTGAACCCTCCGAGAAGCCCGGCAAACAAGGACCAGTTCCCAGGGGGTCCACGATGGCATaGATAACTTCCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: RMYSEPSEKPGKQGPVPRGSTMA*ITSSCF
Trigger: GAAACAGCTGGAAGTTATCAATGCCATCGTGGACCC...CCTGGGAACTGGTCCTTGTTTGCCGGGCTTCTCGGAGGGTTCACTGTACATTCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGGCACCTTCTGGAAGTaGAGGCTGGCCTCGGGGATG +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLGTFWK*RLASGM
Trigger: CATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGCC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGACCTCGTTCTCGGCGTaGATCCTGGCTTCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLTSFSA*ILASRS
Trigger: GGACCTGGAAGCCAGGATCAACGCCGAGAACGAGGT...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGAATGCCCTTGAGGGCTaGACCTTGGCAGCAGCCTGG +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLNALEG*TLAAAW
Trigger: CCAGGCTGCTGCCAAGGTCAAGCCCTCAAGGGCATT...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCGACTCTCATACCATaGCCAGGCAGGGTGTGGAGC +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPTLIP*PGRVWS
Trigger: GCTCCACACCCTGCCTGGCAATGGTATGAGAGTCGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp TATAAAATAACCATTTTCCGAAAGACAGCCACAAGACCACCTGAGAACGAATGTGTGCCGTCCTCGTGCTaGTGGCCCTTCAGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: YKITIFRKTATRPPENECVPSSC*WPFRVR
Trigger: CCGCACCCTGAAGGGCCACAAGCACGAGGACGGCAC...ACATTCGTTCTCAGGTGGTCTTGTGGCTGTCTTTCGGAAAATGGTTATTTTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGTGTACTTTTCATGCTaGAGTGCCTCCTCCGGGACT +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLVYFSC*SASSGT
Trigger: AGTCCCGGAGGAGGCACTCAAGCATGAAAAGTACAC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGCCAAGCTCAATGGGTTaGGCAACTGTGTTGGCACCA +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLPSSMG*ATVLAP
Trigger: TGGTGCCAACACAGTTGCCAAACCCATTGAGCTTGG...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGGGGTCCACGATGGCATaGATAACTTCCAGCTGTTTC +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLGSTMA*ITSSCF
Trigger: GAAACAGCTGGAAGTTATCAATGCCATCGTGGACCC...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS-3UTR CAA 90 bp AAGACAAAAATAACAGTGATGAAGAGGAGGCGGGGTAATGCCCTTGAGGGCTTGTGTGAACTTAAAACATaGCACAGCCACTGCCGAGGG +
Preference number: 5 (lower is better)
Translates to: KTKITVMKRRRGNALEGLCELKT*HSHCRG
Trigger: CCCTCGGCAGTGGCTGTGCAATGTTTTAAGTTCACA...CAAGCCCTCAAGGGCATTACCCCGCCTCCTCTTCATCACTGTTATTTTTGTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGCTGCGGCCCCCTGCCTGGACTGGGGCTGGGACACTaGGGCGGTCCCTATCGGCCGGCGTTGGGCCACGGC +
Preference number: 6 (lower is better)
Translates to: SCGPLPGLGLGH*GGPYRPALGHG
Trigger: GCCGTGGCCCAACGCCGGCCGATAGGGACCGCCCCAGTGTCCCAGCCCCAGTCCAGGCAGGGGGCCGCAGCT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CCCTCTCACTGGGCAGCTGAGGGAGCCGTCGCCGCATaGGCACAGGCAGGGACCCCTCCGGCTCCCCGCCTC +
Preference number: 6 (lower is better)
Translates to: PSHWAAEGAVAA*AQAGTPPAPRL
Trigger: GAGGCGGGGAGCCGGAGGGGTCCCTGCCTGTGCGCATGCGGCGACGGCTCCCTCAGCTGCCCAGTGAGAGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GGGCCCGCAGGGCTGTCAGCCCTCTCACTGGGCAGCTaGGGGAGCCGTCGCCGCATGCGCACAGGCAGGGAC +
Preference number: 6 (lower is better)
Translates to: GPAGLSALSLGS*GSRRRMRTGRD
Trigger: GTCCCTGCCTGTGCGCATGCGGCGACGGCTCCCTCAGCTGCCCAGTGAGAGGGCTGACAGCCCTGCGGGCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CCTGCTCAGCAGCTGGCCGGCCCACGGGCTCAGGGTTaGCCAGGGACCCCCGCTCACCATCCGCAGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PAQQLAGPRAQG*PGTPAHHPQPQ
Trigger: CTGAGGCTGCGGATGGTGAGCGGGGGTCCCTGGGCAACCCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp CTGGCCTCCAAGGGCACCCCAGCGGCCGAGGCCGCCTaGGCCAGGGGGTCCTCTGAGTCACTCTGCGTGCCG +
Preference number: 6 (lower is better)
Translates to: LASKGTPAAEAA*ARGSSESLCVP
Trigger: CGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGCTGGGGTGCCCTTGGAGGCCAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp CCCAGCGGCCGAGGCCGCCTTGGCCAGGGGGTCCTCTaGGTCACTCTGCGTGCCGTCCTCGTGCTTGTGGCC +
Preference number: 6 (lower is better)
Translates to: PSGRGRLGQGVL*VTLRAVLVLVA
Trigger: GGCCACAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp CCGGCGCCTCGTGTTGGAGGTGTATCGGGCACTGCCTaGGCGGGCCCTGCTGAAGGGCTGGCGGGGACCCGT +
Preference number: 6 (lower is better)
Translates to: PAPRVGGVSGTA*AGPAEGLAGTR
Trigger: ACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATACACCTCCAACACGAGGCGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGCGCGGAAGCCGTGGAGCTCCCCGTCCTGCTGCACTaGTCCCTTGGGGCGCTCTGGGTAGGGCTCTCCCTG +
Preference number: 6 (lower is better)
Translates to: GAEAVELPVLLH*SLGALWVGLSL
Trigger: CAGGGAGAGCCCTACCCAGAGCGCCCCAAGGGACCAGTGCAGCAGGACGGGGAGCTCCACGGCTTCCGCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000556508.5
CDS CCA 72 bp TGGCCTCCAAGGGCACCCCAGCGGCCGAGGCCGCCTTaGCCAGGGGGTCCTCTGAGTCACTCTGCGTGCCGT +
Preference number: 6 (lower is better)
Translates to: WPPRAPQRPRPP*PGGPLSHSACR
Trigger: ACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGGCCTCGGCCGCTGGGGTGCCCTTGGAGGCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGGGAGCTCTCCCGCAGACACTGGGCCATGAAGTCCTaGGCCAGGCGGGAGCGGCGCCCCACGCTTCCGAAG +
Preference number: 6 (lower is better)
Translates to: GELSRRHWAMKS*ARRERRPTLPK
Trigger: CTTCGGAAGCGTGGGGCGCCGCTCCCGCCTGGCCCAGGACTTCATGGCCCAGTGTCTGCGGGAGAGCTCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp GAGGGGCTGCCCAGCCGTTCCTCTGTCTTCTCCCGCTaGAGCGAGCCGGCCCTCTGTGGCCCCGAGCTGCGG +
Preference number: 6 (lower is better)
Translates to: EGLPSRSSVFSR*SEPALCGPELR
Trigger: CCGCAGCTCGGGGCCACAGAGGGCCGGCTCGCTCAAGCGGGAGAAGACAGAGGAACGGCTGGGCAGCCCCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp GCCCGCTTCCGGGGCATGGCCAGGATGTCCAGGCGTGACAGCTTCTaGGCCTGCTCAGCAGCTGGCCGGCCCACGGGCTCAGGGTTGCCC +
Preference number: 6 (lower is better)
Translates to: ARFRGMARMSRRDSF*ACSAAGRPTGSGLP
Trigger: GGGCAACCCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTGGCCATGCCCCGGAAGCGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp CAGGGACCCTCGGGGCCTGTGGCCACGCCTTATGGCTaGGCGCCGTACCGGCTCTCCACGGCCCATGTCCGT +
Preference number: 6 (lower is better)
Translates to: QGPSGPVATPYG*APYRLSTAHVR
Trigger: ACGGACATGGGCCGTGGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GGCCCGCTTCCGGGGCATGGCCAGGATGTCCAGGCGTaGCAGCTTCTTGGCCTGCTCAGCAGCTGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: GPLPGHGQDVQA*QLLGLLSSWPA
Trigger: GGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTGGCCATGCCCCGGAAGCGGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp CGGGGTCTGAGTGGTGGAGGTGTATCGGGCACTGCCTaGGCGGGCCCTGCTGAAGGGCTGGCGGGGACCCGT +
Preference number: 6 (lower is better)
Translates to: RGLSGGGVSGTA*AGPAEGLAGTR
Trigger: ACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATACACCTCCACCACTCAGACCCCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000414716.8
CDS GCA 72 bp GGTAGGGCTCTCCCTGGCGCTGGGCGTCAGGCAGCGTaGTACCATCGTCCTCACCCCACCAGGAGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: GRALPGAGRQAA*YHRPHPTRRAA
Trigger: GGCAGCCCTCCTGGTGGGGTGAGGACGATGGTAGCACGCTGCCTGACGCCCAGCGCCAGGGAGAGCCCTACC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TGGAGCGGGTCAAGGCCTGCGGCCCCTTCTGGGAGCTaGCTGAGCTACGGCTCTGCTCCTCCCGGGCAGCTG +
Preference number: 6 (lower is better)
Translates to: WSGSRPAAPSGS*LSYGSAPPGQL
Trigger: CAGCTGCCCGGGAGGAGCAGAGCCGTAGCTCAGCCAGCTCCCAGAAGGGGCCGCAGGCCTTGACCCGCTCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TATCGGGCACTGCCTGAGCGGGCCCTGCTGAAGGGCTaGCGGGGACCCGTGGTGGTGGCTGTGTTGGCAGCC +
Preference number: 6 (lower is better)
Translates to: YRALPERALLKG*RGPVVVAVLAA
Trigger: GGCTGCCAACACAGCCACCACCACGGGTCCCCGCCAGCCCTTCAGCAGGGCCCGCTCAGGCAGTGCCCGATA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGCCGTGGAGCTCCCCGTCCTGCTGCACTGGTCCCTTaGGGCGCTCTGCTGGGTAGGGCTCTCCCTGGCGCT +
Preference number: 6 (lower is better)
Translates to: SRGAPRPAALVP*GALLGRALPGA
Trigger: AGCGCCAGGGAGAGCCCTACCCAGCAGAGCGCCCCAAGGGACCAGTGCAGCAGGACGGGGAGCTCCACGGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453495.2
CDS CCA 72 bp GGGAGCCGTGGCGGGAGCCGTACTCCTCCTCAGAGGTaGACGTGTAATCCGAGCCCTGCTGCCGGCGCCTCG +
Preference number: 6 (lower is better)
Translates to: GSRGGSRTPPQR*TCNPSPAAGAS
Trigger: CGAGGCGCCGGCAGCAGGGCTCGGATTACACGTCCACCTCTGAGGAGGAGTACGGCTCCCGCCACGGCTCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp CGGGCGCCGCTGCTGCTCACCAGGAACCAGGACGTGGCACTCATCTaGGTGCTGGCTGGGCCCGTCTGGCCCTGCTGTTCGGGCTCGGTC +
Preference number: 6 (lower is better)
Translates to: RAPLLLTRNQDVALI*VLAGPVWPCCSGSV
Trigger: GACCGAGCCCGAACAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTGGTGAGCAGCAGCGGCGCCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS TCA 72 bp CGGGGCCTCGGCCCCCGTCCGACCCACTGGCATCGCTaGGGCTGTCAGGATCCAACTCCTCCTGGCCGAAGA +
Preference number: 6 (lower is better)
Translates to: RGLGPRPTHWHR*GCQDPTPPGRR
Trigger: TCTTCGGCCAGGAGGAGTTGGATCCTGACAGCCTCAGCGATGCCAGTGGGTCGGACGGGGGCCGAGGCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CCGCCTTGGCCAGGGGGTCCTCTGAGTCACTCTGCGTaGCGTCCTCGTGCTTGTGGCCCTTCAGGGTGCGGG +
Preference number: 6 (lower is better)
Translates to: PPWPGGPLSHSA*RPRACGPSGCG
Trigger: CCCGCACCCTGAAGGGCCACAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp ACGGGCACTGACCAGGGCGGTGCCTCCCGGGTCCTGTaGAGCTGGCGGGGATGGCGACATCTCCTTCTGTGC +
Preference number: 6 (lower is better)
Translates to: TGTDQGGASRVL*SWRGWRHLLLC
Trigger: GCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGCACCGCCCTGGTCAGTGCCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CGAGGGGTGGACAGGCTGTTGGAGCGGGTCAAGGCCTaGGGCCCCTTCTGGGAGCTGGCTGAGCTACGGCTC +
Preference number: 6 (lower is better)
Translates to: RGVDRLLERVKA*GPFWELAELRL
Trigger: GAGCCGTAGCTCAGCCAGCTCCCAGAAGGGGCCGCAGGCCTTGACCCGCTCCAACAGCCTGTCCACCCCTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CACACTGCGGCCAGAGAAGCTGGTGCGGGCAGGGGCTaGCTCGGGGTCACTAGTCCCTGTGAAGGAGCCGGC +
Preference number: 6 (lower is better)
Translates to: HTAAREAGAGRG*LGVTSPCEGAG
Trigger: GCCGGCTCCTTCACAGGGACTAGTGACCCCGAGGCAGCCCCTGCCCGCACCAGCTTCTCTGGCCGCAGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GTGCGGGTGTGGACAGGCAGGTCGCTCTTGGTGCTGTaGCGGTCATCCCCAGGGCCAACCCGGTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: VRVWTGRSLLVL*RSSPGPTRCSR
Trigger: CCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp ACTGACCAGGGCGGTGCCTCCCGGGTCCTGTGCAGCTaGCGGGGATGGCGACATCTCCTTCTGTGCCCGCAG +
Preference number: 6 (lower is better)
Translates to: TDQGGASRVLCS*RGWRHLLLCPQ
Trigger: CTGCGGGCACAGAAGGAGATGTCGCCATCCCCGCCAGCTGCACAGGACCCGGGAGGCACCGCCCTGGTCAGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGGGCATGGCCAGGATGTCCAGGCGTGACAGCTTCTTaGCCTGCTCAGCAGCTGGCCGGCCCACGGGCTCAG +
Preference number: 6 (lower is better)
Translates to: GAWPGCPGVTAS*PAQQLAGPRAQ
Trigger: CTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTGGCCATGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp GTCTCAGCCGACACCATCTCGCCAGGTGTGGCCTCCTaGCCCGGGGGCCGCCGCTGGCGCAGGGAAAACTTG +
Preference number: 6 (lower is better)
Translates to: VSADTISPGVAS*PGGRRWRRENL
Trigger: CAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGGTGTCGGCTGAGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp CGGGGCATGGCCAGGATGTCCAGGCGTGACAGCTTCTaGGCCTGCTCAGCAGCTGGCCGGCCCACGGGCTCA +
Preference number: 6 (lower is better)
Translates to: RGMARMSRRDSF*ACSAAGRPTGS
Trigger: TGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTGGCCATGCCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp TGCTTGTGGCCCTTCAGGGTGCGGGTGTGGACAGGCAGGTCGCTCTaGGTGCTGTGGCGGTCATCCCCAGGGCCAACCCGGTGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: CLWPFRVRVWTGRSL*VLWRSSPGPTRCSR
Trigger: CCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCACCCTGAAGGGCCACAAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GGGGAGGAAGGGCCGCCCTGGAGGCGCTGGCTCCTCTaGGTTCAGGGTCTGCCTGCTGGGAGCCACATACAC +
Preference number: 6 (lower is better)
Translates to: GEEGPPWRRWLL*VQGLPAGSHIH
Trigger: GTGTATGTGGCTCCCAGCAGGCAGACCCTGAACTCAGAGGAGCCAGCGCCTCCAGGGCGGCCCTTCCTCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS GCA 72 bp TCAGGGTGCGGGTGTGGACAGGCAGGTCGCTCTTGGTaGTGTGGCGGTCATCCCCAGGGCCAACCCGGTGCA +
Preference number: 6 (lower is better)
Translates to: SGCGCGQAGRSW*CGGHPQGQPGA
Trigger: TGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCACCCTGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp GAGGCCGCCTTGGCCAGGGGGTCCTCTGAGTCACTCTaGGTGCCGTCCTCGTGCTTGTGGCCCTTCAGGGTG +
Preference number: 6 (lower is better)
Translates to: EAALARGSSESL*VPSSCLWPFRV
Trigger: CACCCTGAAGGGCCACAAGCACGAGGACGGCACGCAGAGTGACTCAGAGGACCCCCTGGCCAAGGCGGCCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp TGTAGTAGCTCCTGGGGGTCCCGCTTGATCTGCCTCTaGAGCCGCACCTGCTCCCCGCTGGCCTCCAAGGGC +
Preference number: 6 (lower is better)
Translates to: CSSSWGSRLICL*SRTCSPLASKG
Trigger: GCCCTTGGAGGCCAGCGGGGAGCAGGTGCGGCTGCAGAGGCAGATCAAGCGGGACCCCCAGGAGCTACTACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GCTGCGGGGTCTCCTTCGTGGGGATCTCGAAGTAGCTaGGCTCCCGCCGGAACGAGCAGCCCTGAGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AAGSPSWGSRSS*APAGTSSPEAQ
Trigger: CTGAGCCTCAGGGCTGCTCGTTCCGGCGGGAGCCCAGCTACTTCGAGATCCCCACGAAGGAGACCCCGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CCTTCAGGGTGCGGGTGTGGACAGGCAGGTCGCTCTTaGTGCTGTGGCGGTCATCCCCAGGGCCAACCCGGT +
Preference number: 6 (lower is better)
Translates to: PSGCGCGQAGRS*CCGGHPQGQPG
Trigger: ACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAAGAGCGACCTGCCTGTCCACACCCGCACCCTGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TGTCAGGATCCAACTCCTCCTGGCCGAAGAGGCGGCTaGGCTGCTCACTGTCCAGCTCCGGTGGCCCAGGCC +
Preference number: 6 (lower is better)
Translates to: CQDPTPPGRRGG*AAHCPAPVAQA
Trigger: GGCCTGGGCCACCGGAGCTGGACAGTGAGCAGCCCAGCCGCCTCTTCGGCCAGGAGGAGTTGGATCCTGACA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AATCCAGGGACCCTCGGGGCCTGTGGCCACGCCTTATaGCTGAGCGCCGTACCGGCTCTCCACGGCCCATGT +
Preference number: 6 (lower is better)
Translates to: NPGTLGACGHAL*LSAVPALHGPC
Trigger: ACATGGGCCGTGGAGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTCCCTGGATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TCCTCACTGGGCCAATCCAGGGACCCTCGGGGCCTGTaGCCACGCCTTATGGCTGAGCGCCGTACCGGCTCT +
Preference number: 6 (lower is better)
Translates to: SSLGQSRDPRGL*PRLMAERRTGS
Trigger: AGAGCCGGTACGGCGCTCAGCCATAAGGCGTGGCCACAGGCCCCGAGGGTCCCTGGATTGGCCCAGTGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp GCCACCTTGGTCTCAGCCGACACCATCTCGCCAGGTGTGGCCTCCTaGCCCGGGGGCCGCCGCTGGCGCAGGGAAAACTTGGTGATATGG +
Preference number: 6 (lower is better)
Translates to: ATLVSADTISPGVAS*PGGRRWRRENLVIW
Trigger: CCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGAGGCCACACCTGGCGAGATGGTGTCGGCTGAGACCAAGGTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp CGGTGCAGCAGGCTCGGGTCATTCTGCACCAGCCAGTCGGCCACCTaGGTCTCAGCCGACACCATCTCGCCAGGTGTGGCCTCCTTGCCC +
Preference number: 6 (lower is better)
Translates to: RCSRLGSFCTSQSAT*VSADTISPGVASLP
Trigger: GGGCAAGGAGGCCACACCTGGCGAGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCTGCTGCACCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp CATGTCCGTCGGGCCAAGTGGGTGATGCTGCCTCTCTaGGGACTGCTCACGGGCACTGACCAGGGCGGTGCC +
Preference number: 6 (lower is better)
Translates to: HVRRAKWVMLPL*GLLTGTDQGGA
Trigger: GGCACCGCCCTGGTCAGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGACGGACATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GGCTCTCCACGGCCCATGTCCGTCGGGCCAAGTGGGTaGTGCTGCCTCTCTGAGGACTGCTCACGGGCACTG +
Preference number: 6 (lower is better)
Translates to: GSPRPMSVGPSG*CCLSEDCSRAL
Trigger: CAGTGCCCGTGAGCAGTCCTCAGAGAGGCAGCATCACCCACTTGGCCCGACGGACATGGGCCGTGGAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GAGAGTTCAGCGAGCCGGGCGGCACCTTCTGGAAGTTaGGGCTGGCCTCGGGGATGCGCTGCACCAGCTCCT +
Preference number: 6 (lower is better)
Translates to: ESSASRAAPSGS*GWPRGCAAPAP
Trigger: AGGAGCTGGTGCAGCGCATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGCCGCCCGGCTCGCTGAACTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp TTGGTGCTGTGGCGGTCATCCCCAGGGCCAACCCGGTaGAGCAGGCTCGGGTCATTCTGCACCAGCCAGTCG +
Preference number: 6 (lower is better)
Translates to: LVLWRSSPGPTR*SRLGSFCTSQS
Trigger: CGACTGGCTGGTGCAGAATGACCCGAGCCTGCTGCACCGGGTTGGCCCTGGGGATGACCGCCACAGCACCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp ATGGCCAGGATGTCCAGGCGTGACAGCTTCTTGGCCTaGTCAGCAGCTGGCCGGCCCACGGGCTCAGGGTTG +
Preference number: 6 (lower is better)
Translates to: MARMSRRDSFLA*SAAGRPTGSGL
Trigger: CAACCCTGAGCCCGTGGGCCGGCCAGCTGCTGAGCAGGCCAAGAAGCTGTCACGCCTGGACATCCTGGCCAT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGAAGGCAGAGACGCACACGCACAGGGAGGCTGGCCTaGCCAGGTCTGGGGCCTAGATCAGGAACCTCTCGG +
Preference number: 6 (lower is better)
Translates to: GRQRRTRTGRLA*PGLGPRSGTSR
Trigger: CCGAGAGGTTCCTGATCTAGGCCCCAGACCTGGCCAGGCCAGCCTCCCTGTGCGTGTGCGTCTCTGCCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251181.8
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CAGGAACCAGGACGTGGCACTCATCTTGGTGCTGGCTaGGCCCGTCTGGCCCTGCTGTTCGGGCTCGGTCTC +
Preference number: 6 (lower is better)
Translates to: QEPGRGTHLGAG*ARLALLFGLGL
Trigger: GAGACCGAGCCCGAACAGCAGGGCCAGACGGGCCCAGCCAGCACCAAGATGAGTGCCACGTCCTGGTTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000414716.8
ENST00000453495.2
CDS CCA 72 bp CCCCTTCTCCGGCCTGGGGTTCGAGGCCTCGCAGTATaGTGTGTGTTCCGGCAGTGCCTCGCTCCTCTTGGG +
Preference number: 6 (lower is better)
Translates to: PLLRPGVRGLAV*CVFRQCLAPLG
Trigger: CCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGGCTGCAGTCATCAAACTCGATGGTGAAGGAGGCGTaGCTCTGCACCACAGGGGCCGCTCCGCCCCCACCT +
Preference number: 6 (lower is better)
Translates to: GLQSSNSMVKEA*LCTTGAAPPPP
Trigger: AGGTGGGGGCGGAGCGGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCATCGAGTTTGATGACTGCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GCCGCCAGGGCCGTCTCCGTCTCCTTCAAGATCAGGTaGGTGTCCTGGGAGTGGAAGTCCATGCGTGCGGCC +
Preference number: 6 (lower is better)
Translates to: AARAVSVSFKIR*VSWEWKSMRAA
Trigger: GGCCGCACGCATGGACTTCCACTCCCAGGACACCCACCTGATCTTGAAGGAGACGGAGACGGCCCTGGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AAGTCCCGAGAGTTCAGCGAGCCGGGCGGCACCTTCTaGAAGTTGAGGCTGGCCTCGGGGATGCGCTGCACC +
Preference number: 6 (lower is better)
Translates to: KSREFSEPGGTF*KLRLASGMRCT
Trigger: GGTGCAGCGCATCCCCGAGGCCAGCCTCAACTTCCAGAAGGTGCCGCCCGGCTCGCTGAACTCTCGGGACTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp CGAGAACCTAGCCGTCCTGCCCCGGTGGCCTCAGGGGTTTCGTGGTaGGAGGCCATCACATCTGAGCTGGGTAGGTGGGCGAGGACAGGG +
Preference number: 6 (lower is better)
Translates to: REPSRPAPVASGVSW*EAITSELGRWARTG
Trigger: CCCTGTCCTCGCCCACCTACCCAGCTCAGATGTGATGGCCTCCAACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGCTAGGTTCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp CTGATGCATGAAGGGCACCAAAGTCCCATCTGTGCCTaGCACTCGGCGGTGGGGAGGGCTGGGCCCGGGATG +
Preference number: 6 (lower is better)
Translates to: LMHEGHQSPICA*HSAVGRAGPGM
Trigger: CATCCCGGGCCCAGCCCTCCCCACCGCCGAGTGTCAGGCACAGATGGGACTTTGGTGCCCTTCATGCATCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS TCA 72 bp CCGGCTGTGCAGAGCTGGCCAAGCTCCTGTTTCCTGTaGGCAGGTCCAGGCTCCCACTGGGGTCCACGATGG +
Preference number: 6 (lower is better)
Translates to: PAVQSWPSSCFL*AGPGSHWGPRW
Trigger: CCATCGTGGACCCCAGTGGGAGCCTGGACCTGCTCACAGGAAACAGGAGCTTGGCCAGCTCTGCACAGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000251181.8
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GAACGAGCCCGGCTGGAGCTGCCAGCCCTCGGGGTCTaGGTGGCTGTTGAGGTGTGGGAGCGTGTGTGTTTG +
Preference number: 6 (lower is better)
Translates to: ERARLELPALGV*VAVEVWERVCL
Trigger: CAAACACACACGCTCCCACACCTCAACAGCCACTCAGACCCCGAGGGCTGGCAGCTCCAGCCGGGCTCGTTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CCTCACCCCACCAGGAGGGCTGCCCATACAGGGGTGTaGGGTAAGAGGCTGCCTCTGTTCCTGGTCTCCGGT +
Preference number: 6 (lower is better)
Translates to: PHPTRRAAHTGV*GKRLPLFLVSG
Trigger: ACCGGAGACCAGGAACAGAGGCAGCCTCTTACCGCACACCCCTGTATGGGCAGCCCTCCTGGTGGGGTGAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp GGGGGACCACTGGCTGGCTCCTTAGTGAAGCTCTCTTaGCGGAGAAAGGCTGGGGCAGGGCCGTCGGGTTCT +
Preference number: 6 (lower is better)
Translates to: GGPLAGSLVKLS*RRKAGAGPSGS
Trigger: AGAACCCGACGGCCCTGCCCCAGCCTTTCTCCGGCAAGAGAGCTTCACTAAGGAGCCAGCCAGTGGTCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GAGGCGCTGGCTCCTCTGAGTTCAGGGTCTGCCTGCTaGGAGCCACATACACGTGCACACGGGAGGGCTGCT +
Preference number: 6 (lower is better)
Translates to: EALAPLSSGSAC*EPHTRAHGRAA
Trigger: AGCAGCCCTCCCGTGTGCACGTGTATGTGGCTCCCAGCAGGCAGACCCTGAACTCAGAGGAGCCAGCGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS CCA 72 bp CCTCTGTTCCTGGTCTCCGGTCCCCCTTCTCCGGCCTaGGGTTCGAGGCCTCGCAGTATGGTGTGTGTTCCG +
Preference number: 6 (lower is better)
Translates to: PLFLVSGPPSPA*GSRPRSMVCVP
Trigger: CGGAACACACACCATACTGCGAGGCCTCGAACCCCAGGCCGGAGAAGGGGGACCGGAGACCAGGAACAGAGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TCGCCAGGTGTGGCCTCCTTGCCCGGGGGCCGCCGCTaGCGCAGGGAAAACTTGGTGATATGGTCCTTGATC +
Preference number: 6 (lower is better)
Translates to: SPGVASLPGGRR*RRENLVIWSLI
Trigger: GATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGAGGCCACACCTGGCGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGCTCGGGTCATTCTGCACCAGCCAGTCGGCCACCTTaGTCTCAGCCGACACCATCTCGCCAGGTGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GSGHSAPASRPP*SQPTPSRQVWP
Trigger: AGGCCACACCTGGCGAGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CTGGCATCGCTGAGGCTGTCAGGATCCAACTCCTCCTaGCCGAAGAGGCGGCTGGGCTGCTCACTGTCCAGC +
Preference number: 6 (lower is better)
Translates to: LASLRLSGSNSS*PKRRLGCSLSS
Trigger: GCTGGACAGTGAGCAGCCCAGCCGCCTCTTCGGCCAGGAGGAGTTGGATCCTGACAGCCTCAGCGATGCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GCCGTCTCCGTCTCCTTCAAGATCAGGTGGGTGTCCTaGGAGTGGAAGTCCATGCGTGCGGCCCGGGTAGCG +
Preference number: 6 (lower is better)
Translates to: AVSVSFKIRWVS*EWKSMRAARVA
Trigger: CGCTACCCGGGCCGCACGCATGGACTTCCACTCCCAGGACACCCACCTGATCTTGAAGGAGACGGAGACGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGACAGCCCGTGCTTCGGCCATGGTGGGCTTGCGGCTaGCACAGCACAACTCCACACTGCGGCCAGAGAAGC +
Preference number: 6 (lower is better)
Translates to: RQPVLRPWWACG*HSTTPHCGQRS
Trigger: GCTTCTCTGGCCGCAGTGTGGAGTTGTGCTGTGCCAGCCGCAAGCCCACCATGGCCGAAGCACGGGCTGTCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CGTCCCCAGCCACATCGTGGATCTCCTGGGCTAGGATaGCCACGTCCTTCACCAGCGTCTGGCTCAGCCTGG +
Preference number: 6 (lower is better)
Translates to: RPQPHRGSPGLG*PRPSPASGSAW
Trigger: CCAGGCTGAGCCAGACGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGACG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp AGGCTCGGGTCATTCTGCACCAGCCAGTCGGCCACCTaGGTCTCAGCCGACACCATCTCGCCAGGTGTGGCC +
Preference number: 6 (lower is better)
Translates to: RLGSFCTSQSAT*VSADTISPGVA
Trigger: GGCCACACCTGGCGAGATGGTGTCGGCTGAGACCAAGGTGGCCGACTGGCTGGTGCAGAATGACCCGAGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp GAGTTCAGGGTCTGCCTGCTGGGAGCCACATACACGTaGACACGGGAGGGCTGCTCCACAGGTGCACACGAG +
Preference number: 6 (lower is better)
Translates to: EFRVCLLGATYT*TREGCSTGAHE
Trigger: CTCGTGTGCACCTGTGGAGCAGCCCTCCCGTGTGCACGTGTATGTGGCTCCCAGCAGGCAGACCCTGAACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000251181.8
CDS CCA 72 bp TCGTGGTTGGAGGCCATCACATCTGAGCTGGGTAGGTaGGCGAGGACAGGGCCACGCTCCTCACTGGGCCAA +
Preference number: 6 (lower is better)
Translates to: SWLEAITSELGR*ARTGPRSSLGQ
Trigger: TTGGCCCAGTGAGGAGCGTGGCCCTGTCCTCGCCCACCTACCCAGCTCAGATGTGATGGCCTCCAACCACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CTGGTTTCCGGCGAGAACCTAGCCGTCCTGCCCCGGTaGCCTCAGGGGTTTCGTGGTTGGAGGCCATCACAT +
Preference number: 6 (lower is better)
Translates to: LVSGENLAVLPR*PQGFRGWRPSH
Trigger: ATGTGATGGCCTCCAACCACGAAACCCCTGAGGCCACCGGGGCAGGACGGCTAGGTTCTCGCCGGAAACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GAGGAGCCCAGTGTGTCACCGTCCCCAGCCACATCGTaGATCTCCTGGGCTAGGATGGCCACGTCCTTCACC +
Preference number: 6 (lower is better)
Translates to: EEPSVSPSPATS*ISWARMATSFT
Trigger: GGTGAAGGACGTGGCCATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGACGGTGACACACTGGGCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp GAGGCCTCGCAGTATGGTGTGTGTTCCGGCAGTGCCTCGCTCCTCTaGGGCGCCAAACCCTTCACGCTCACCTGCAGCTGGCTGGTGTAC +
Preference number: 6 (lower is better)
Translates to: EASQYGVCSGSASLL*GAKPFTLTCSWLVY
Trigger: GTACACCAGCCAGCTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTGCGAGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp GGTGTGGCCTCCTTGCCCGGGGGCCGCCGCTGGCGCAGGGAAAACTaGGTGATATGGTCCTTGATCTTCATCTTGCCAGGGCTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: GVASLPGGRRWRREN*VIWSLIFILPGLQS
Trigger: TGACTGCAGCCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGAGGCCACACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GCGCCTCGGTCTCGATGGTGTATGTCCCTGCGTCACTaGGGCTGTCGTCCTCCTCCTGTTTCCGTGCCTTGG +
Preference number: 6 (lower is better)
Translates to: APRSRWCMSLRH*GCRPPPVSVPW
Trigger: CCAAGGCACGGAAACAGGAGGAGGACGACAGCCTCAGTGACGCAGGGACATACACCATCGAGACCGAGGCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp GTTCGAGGCCTCGCAGTATGGTGTGTGTTCCGGCAGTaGCTCGCTCCTCTTGGGCGCCAAACCCTTCACGCT +
Preference number: 6 (lower is better)
Translates to: VRGLAVWCVFRQ*LAPLGRQTLHA
Trigger: AGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTGCGAGGCCTCGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGTATGGTGTGTGTTCCGGCAGTGCCTCGCTCCTCTTaGGCGCCAAACCCTTCACGCTCACCTGCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: SMVCVPAVPRSS*APNPSRSPAAG
Trigger: GCCAGCTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGTGTGTCACCGTCCCCAGCCACATCGTGGATCTCCTaGGCTAGGATGGCCACGTCCTTCACCAGCGTCTGG +
Preference number: 6 (lower is better)
Translates to: SVSPSPATSWIS*ARMATSFTSVW
Trigger: CCAGACGCTGGTGAAGGACGTGGCCATCCTAGCCCAGGAGATCCACGATGTGGCTGGGGACGGTGACACACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TTGGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTCTaGTCAAAGTCCCGAGAGTTCAGCGAGCCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: LARASSQLSFMF*SKSREFSEPGG
Trigger: GCCGCCCGGCTCGCTGAACTCTCGGGACTTTGACCAGAACATGAACGACAGCTGTGAGGACGCCCTGGCCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp CAGTATGGTGTGTGTTCCGGCAGTGCCTCGCTCCTCTaGGGCGCCAAACCCTTCACGCTCACCTGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: QYGVCSGSASLL*GAKPFTLTCSW
Trigger: CCAGCTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGAGGCACTGCCGGAACACACACCATACTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp TCATCTTGCCAGGGCTGCAGTCATCAAACTCGATGGTaGAGGAGGCGTGGCTCTGCACCACAGGGGCCGCTC +
Preference number: 6 (lower is better)
Translates to: SSCQGCSHQTRW*RRRGSAPQGPL
Trigger: GAGCGGCCCCTGTGGTGCAGAGCCACGCCTCCTTCACCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp TCCTTGCCCGGGGGCCGCCGCTGGCGCAGGGAAAACTaGGTGATATGGTCCTTGATCTTCATCTTGCCAGGG +
Preference number: 6 (lower is better)
Translates to: SLPGGRRWRREN*VIWSLIFILPG
Trigger: CCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGGCAAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp TCGAAGATCACCTCCTCTCGGTTCCGAGGCCGCGTCTaGTTGGCCAGGGCGTCCTCACAGCTGTCGTTCATG +
Preference number: 6 (lower is better)
Translates to: SKITSSRFRGRV*LARASSQLSFM
Trigger: CATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAACCGAGAGGAGGTGATCTTCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GGGGGCCGCCGCTGGCGCAGGGAAAACTTGGTGATATaGTCCTTGATCTTCATCTTGCCAGGGCTGCAGTCA +
Preference number: 6 (lower is better)
Translates to: GGRRWRRENLVI*SLIFILPGLQS
Trigger: TGACTGCAGCCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGATCACCTCCTCTCGGTTCCGAGGCCGCGTCTTGTTaGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTCT +
Preference number: 6 (lower is better)
Translates to: RSPPLGSEAASC*PGRPHSCRSCS
Trigger: AGAACATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAACCGAGAGGAGGTGATCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp AAGATCACCTCCTCTCGGTTCCGAGGCCGCGTCTTGTaGGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTC +
Preference number: 6 (lower is better)
Translates to: KITSSRFRGRVL*ARASSQLSFMF
Trigger: GAACATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAACCGAGAGGAGGTGATCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp CCCGGGGGCCGCCGCTGGCGCAGGGAAAACTTGGTGATATGGTCCTaGATCTTCATCTTGCCAGGGCTGCAGTCATCAAACTCGATGGTG +
Preference number: 6 (lower is better)
Translates to: PGGRRWRRENLVIWS*IFILPGLQSSNSMV
Trigger: CACCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCGGCGGCCCCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp TCGCTCCTCTTGGGCGCCAAACCCTTCACGCTCACCTaGAGCTGGCTGGTGTACTTTTCATGCTTGAGTGCC +
Preference number: 6 (lower is better)
Translates to: SLLLGAKPFTLT*SWLVYFSCLSA
Trigger: GGCACTCAAGCATGAAAAGTACACCAGCCAGCTGCAGGTGAGCGTGAAGGGTTTGGCGCCCAAGAGGAGCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp CAGCGTCTGGCTCAGCCTGGCAATCTCCGCAATCTCTaGCGTCTGCACGATGAAACCATAAGGGTCAGGCTC +
Preference number: 6 (lower is better)
Translates to: QRLAQPGNLRNL*RLHDETIRVRL
Trigger: GAGCCTGACCCTTATGGTTTCATCGTGCAGACGGCAGAGATTGCGGAGATTGCCAGGCTGAGCCAGACGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp TTCTCGGCAAGGTGCTCTGTGTTCTCACGGATGGCCTaGGACAGCTGGGACACCGGGTTCAGCATCAGGTTA +
Preference number: 6 (lower is better)
Translates to: FSARCSVFSRMA*DSWDTGFSIRL
Trigger: TAACCTGATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAGAGCACCTTGCCGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CCCGTCATCAGACTCATCTCTGTCCCCTCTGATGACTaGGCGAAAGGTGGCCGAAGATGCCCTGGAGAGTTC +
Preference number: 6 (lower is better)
Translates to: PVIRLISVPSDD*AKGGRRCPGEF
Trigger: GAACTCTCCAGGGCATCTTCGGCCACCTTTCGCCCAGTCATCAGAGGGGACAGAGATGAGTCTGATGACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp TCATCTTCTCGGCAAGGTGCTCTGTGTTCTCACGGATaGCCTGCGACAGCTGGGACACCGGGTTCAGCATCA +
Preference number: 6 (lower is better)
Translates to: SSSRQGALCSHG*PATAGTPGSAS
Trigger: TGATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAGAGCACCTTGCCGAGAAGATGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp AGGTTATCGAAGATCACCTCCTCTCGGTTCCGAGGCCGCGTCTTGTaGGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTCTGGTCAAAG +
Preference number: 6 (lower is better)
Translates to: RLSKITSSRFRGRVL*ARASSQLSFMFWSK
Trigger: CTTTGACCAGAACATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAACCGAGAGGAGGTGATCTTCGATAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp ATCAGGTTATCGAAGATCACCTCCTCTCGGTTCCGAGGCCGCGTCTaGTTGGCCAGGGCGTCCTCACAGCTGTCGTTCATGTTCTGGTCA +
Preference number: 6 (lower is better)
Translates to: IRLSKITSSRFRGRV*LARASSQLSFMFWS
Trigger: TGACCAGAACATGAACGACAGCTGTGAGGACGCCCTGGCCAACAAGACGCGGCCTCGGAACCGAGAGGAGGTGATCTTCGATAACCTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GCCTGGCAATCTCCGCAATCTCTGCCGTCTGCACGATaGAACCATAAGGGTCAGGCTCCTCCTCATCGTCGT +
Preference number: 6 (lower is better)
Translates to: AWQSPQSLPSAR*NHKGQAPPHRR
Trigger: ACGACGATGAGGAGGAGCCTGACCCTTATGGTTTCATCGTGCAGACGGCAGAGATTGCGGAGATTGCCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp GGTGTGTCCTCGTCGAAGAACTCGATGACAAAGGCCTaGTGGTTATGTAGTAGCTCCTGGGGGTCCCGCTTG +
Preference number: 6 (lower is better)
Translates to: GVSSSKNSMTKA*WLCSSSWGSRL
Trigger: CAAGCGGGACCCCCAGGAGCTACTACATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACGAGGACACACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp AGGTGCTCTGTGTTCTCACGGATGGCCTGCGACAGCTaGGACACCGGGTTCAGCATCAGGTTATCGAAGATC +
Preference number: 6 (lower is better)
Translates to: RCSVFSRMACDS*DTGFSIRLSKI
Trigger: GATCTTCGATAACCTGATGCTGAACCCGGTGTCCCAGCTGTCGCAGGCCATCCGTGAGAACACAGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp GCAAGCGGTTTCCTAGATAACACAGCGTCCCCATTCTaGTCCCCAATGAAGAAAGAGGCGGGAGTTGGCTCC +
Preference number: 6 (lower is better)
Translates to: ASGFLDNTASPF*SPMKKEAGVGS
Trigger: GGAGCCAACTCCCGCCTCTTTCTTCATTGGGGACCAGAATGGGGACGCTGTGTTATCTAGGAAACCGCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 90 bp CGCTGGCGCAGGGAAAACTTGGTGATATGGTCCTTGATCTTCATCTaGCCAGGGCTGCAGTCATCAAACTCGATGGTGAAGGAGGCGTGG +
Preference number: 6 (lower is better)
Translates to: RWRRENLVIWSLIFI*PGLQSSNSMVKEAW
Trigger: CCACGCCTCCTTCACCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCTGCGCCAGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS TCA 72 bp GCTTCTTTCGGGGTGTGTCCTCGTCGAAGAACTCGATaGCAAAGGCCTGCTGGTTATGTAGTAGCTCCTGGG +
Preference number: 6 (lower is better)
Translates to: ASFGVCPRRRTR*QRPAGYVVAPG
Trigger: CCCAGGAGCTACTACATAACCAGCAGGCCTTTGTCATCGAGTTCTTCGACGAGGACACACCCCGAAAGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS GCA 72 bp TACTTTTCATGCTTGAGTGCCTCCTCCGGGACTCGGTaGTGCACACGCTCCAGCACATACATGTTGGAATCG +
Preference number: 6 (lower is better)
Translates to: YFSCLSASSGTR*CTRSSTYMLES
Trigger: CGATTCCAACATGTATGTGCTGGAGCGTGTGCAGCACCGAGTCCCGGAGGAGGCACTCAAGCATGAAAAGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CCA 72 bp CGGATGACATCGTTGAGCTTCAGCGTGACGTACTTCTaGTCCGGGATGCGCATGTCATTCACAAACGTCCCA +
Preference number: 6 (lower is better)
Translates to: RMTSLSFSVTYF*SGMRMSFTNVP
Trigger: TGGGACGTTTGTGAATGACATGCGCATCCCGGACCAGAAGTACGTCACGCTGAAGCTCAACGATGTCATCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5
CDS CAA 72 bp AGGGAAAACTTGGTGATATGGTCCTTGATCTTCATCTaGCCAGGGCTGCAGTCATCAAACTCGATGGTGAAG +
Preference number: 6 (lower is better)
Translates to: RENLVIWSLIFI*PGLQSSNSMVK
Trigger: CTTCACCATCGAGTTTGATGACTGCAGCCCTGGCAAGATGAAGATCAAGGACCATATCACCAAGTTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000414716.8
ENST00000453495.2
ENST00000556508.5