RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP162 (Homo sapiens)

Ensembl gene IDs: ENSG00000135315

Ensembl transcript IDs: ENST00000257766.8, ENST00000403245.8, ENST00000435955.1, ENST00000461137.5, ENST00000487999.1, ENST00000497936.5, ENST00000617909.1

Found 307 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTTCATAAGCTGTCCTaGCAGTGGCACAATCCCATC +
Preference number: 2 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFHKLS*QWHNPI
Trigger: GATGGGATTGTGCCACTGTCAGGACAGCTTATGAAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTTCATAAGCTGTCCTaGCAGTGGCACAATCCCATC +
Preference number: 2 (lower is better)
Translates to: NEIMSFAATWIELEAIILFHKLS*QWHNPI
Trigger: GATGGGATTGTGCCACTGTCAGGACAGCTTATGAAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTTCATAAGCTGTCCTaGCAGTGGCACAATCCCATC +
Preference number: 2 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLFHKLS*QWHNPI
Trigger: GATGGGATTGTGCCACTGTCAGGACAGCTTATGAAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGCGGCAGTAAGCGTTaGAAAATTACCTGTTGGGTA +
Preference number: 2 (lower is better)
Translates to: NEIMSFAATWIELEAIILSGSKR*KITCWV
Trigger: TACCCAACAGGTAATTTTTCAACGCTTACTGCCGCT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTGGTTGTTTGCTTTCTaGAAACATATTGGAACACTT +
Preference number: 2 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSWLFAF*KHIGTL
Trigger: AAGTGTTCCAATATGTTTCCAGAAAGCAAACAACCA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR CAA 90 bp AAATGTTGCTTTGGTTGTTTGCTTTCTGGAAACATATTGGAACACTaGTTTTTCATAAGCTGTCCTGACAGTGGCACAATCCCATCCATC +
Preference number: 2 (lower is better)
Translates to: KCCFGCLLSGNILEH*FFISCPDSGTIPSI
Trigger: GATGGATGGGATTGTGCCACTGTCAGGACAGCTTATGAAAAACAAGTGTTCCAATATGTTTCCAGAAAGCAAACAACCAAAGCAACATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTTCTAGCATACAAGTaGGCCCTTCTCTGCTATAAA +
Preference number: 2 (lower is better)
Translates to: NEIMSFAATWIELEAIILFLAYK*ALLCYK
Trigger: TTTATAGCAGAGAAGGGCTCACTTGTATGCTAGAAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTTCTAGCATACAAGTaGGCCCTTCTCTGCTATAAA +
Preference number: 2 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQFLAYK*ALLCYK
Trigger: TTTATAGCAGAGAAGGGCTCACTTGTATGCTAGAAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATGGTTGTTTGCTTTCTaGAAACATATTGGAACACTT +
Preference number: 2 (lower is better)
Translates to: NEIMSFAATWIELEAIILWLFAF*KHIGTL
Trigger: AAGTGTTCCAATATGTTTCCAGAAAGCAAACAACCA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR TCA 90 bp AGTTCATTTGTTTCTAAGCTATCAGTACTTAAGAGAGAGGTTCCACTGCTCTTAATTTCCATAACAGGCTaGGAAGTCTTCTTTGTTTTC +
Preference number: 2 (lower is better)
Translates to: SSFVSKLSVLKREVPLLLISITG*EVFFVF
Trigger: GAAAACAAAGAAGACTTCTCAGCCTGTTATGGAAAT...TAAGAGCAGTGGAACCTCTCTCTTAAGTACTGATAGCTTAGAAACAAATGAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
3UTR-3UTR TCA 90 bp CTACTATGGTTGAGCTCAGAAACTACTAGTTCATTTGTTTCTAAGCTATCAGTACTGCTCTTAAGAAATTaGATCTTTTCAGCAGACTCC +
Preference number: 2 (lower is better)
Translates to: LLWLSSETTSSFVSKLSVLLLRN*IFSADS
Trigger: GGAGTCTGCTGAAAAGATTCAATTTCTTAAGAGCAG...TACTGATAGCTTAGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
3UTR-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTGGTTGTTTGCTTTCTaGAAACATATTGGAACACTT +
Preference number: 2 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLWLFAF*KHIGTL
Trigger: AAGTGTTCCAATATGTTTCCAGAAAGCAAACAACCA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGAAATGTTGCTTTGGTaGTTTGCTTTCTGGAAACAT +
Preference number: 3 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSEMLLW*FAFWKH
Trigger: ATGTTTCCAGAAAGCAAACAACCAAAGCAACATTTC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CAA 90 bp CTGAGAAGTCTTCTTTGTTTTCAAATAGCTCACATTTGTTCCAAGAAGTCCTGTTTCTCAAGAGGAGTGTaGAATTCTCCCTCAGAAGGT +
Preference number: 3 (lower is better)
Translates to: LRSLLCFQIAHICSKKSCFSRGV*NSPSEG
Trigger: ACCTTCTGAGGGAGAATTCAACACTCCTCTTGAGAA...ACAGGACTTCTTGGAACAAATGTGAGCTATTTGAAAACAAAGAAGACTTCTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
3UTR-3UTR CAA 90 bp GAGAGAGGTTCCACTGCTCTTAAGAAATTGAATCTTTTCAGCAGACTCCTCTTCGCTGAGAAGTCTTCTTaGTTTTCAAATAGCTCACAT +
Preference number: 3 (lower is better)
Translates to: ERGSTALKKLNLFSRLLFAEKSS*FSNSSH
Trigger: ATGTGAGCTATTTGAAAACAAAGAAGACTTCTCAGC...GAAGAGGAGTCTGCTGAAAAGATTCAATTTCTTAAGAGCAGTGGAACCTCTCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000435955.1
3UTR TCA 72 bp TCCAATAGGGGAAAGAGTGTGAGCGGCAGTAAGCGTTaGAAAATTACCTGTTGGGTACAGTGTTTAATATTT +
Preference number: 3 (lower is better)
Translates to: SNRGKSVSGSKR*KITCWVQCLIF
Trigger: AAATATTAAACACTGTACCCAACAGGTAATTTTTCAACGCTTACTGCCGCTCACACTCTTTCCCCTATTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATGTTGCTTTGGTTGTTaGCTTTCTGGAAACATATTG +
Preference number: 3 (lower is better)
Translates to: NEIMSFAATWIELEAIILCCFGC*LSGNIL
Trigger: CAATATGTTTCCAGAAAGCAAACAACCAAAGCAACA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGAAATGTTGCTTTGGTaGTTTGCTTTCTGGAAACAT +
Preference number: 3 (lower is better)
Translates to: NEIMSFAATWIELEAIILEMLLW*FAFWKH
Trigger: ATGTTTCCAGAAAGCAAACAACCAAAGCAACATTTC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTGTTGCTTTGGTTGTTaGCTTTCTGGAAACATATTG +
Preference number: 3 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLCCFGC*LSGNIL
Trigger: CAATATGTTTCCAGAAAGCAAACAACCAAAGCAACA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR CCA 72 bp TGCATATATTCTCACTTAAAAGTAGGAGCTAAACAATaGGTACACAGAGACATAAAGATGGAGATAACAGAC +
Preference number: 3 (lower is better)
Translates to: CIYSHLKVGAKQ*VHRDIKMEITD
Trigger: GTCTGTTATCTCCATCTTTATGTCTCTGTGTACCCATTGTTTAGCTCCTACTTTTAAGTGAGAATATATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGGCACAACCACTCCTTaGCGGTGCAGCTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSGTTTP*RCSSRR
Trigger: TCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGAAACACTCTGCCTCTaGATTCCGCGCTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSETLCL*IPRFPG
Trigger: TCCGGGAAAGCGCGGAATTCAGAGGCAGAGTGTTTC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403245.8
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGTGGTTGGTACAGCTTaGTGTCCAGGGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSVVGTA*CPGFQG
Trigger: TCCCTGGAACCCTGGACAGCAAGCTGTACCAACCAC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGGCACAACCACTCCTTaGCGGTGCAGCTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQGTTTP*RCSSRR
Trigger: TCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCATAGGGGAAAGAGTGTaGGCGGCAGTAAGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSIGERV*AAVSVE
Trigger: TTCAACGCTTACTGCCGCTCACACTCTTTCCCCTAT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp TCCAATCCCACTCCGAGACTACTATGGTTGAGCTCAGAAACTACTAGTTCATTTGAAACACTCTGCCTCTaGATTCCGCGCTTTCCCGGA +
Preference number: 4 (lower is better)
Translates to: SNPTPRLLWLSSETTSSFETLCL*IPRFPG
Trigger: TCCGGGAAAGCGCGGAATTCAGAGGCAGAGTGTTTC...AAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGGATTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTGCTCAATTAGGGCTTaGGCACCCCTCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSCSIRA*APLHLS
Trigger: GGATAAATGGAGGGGTGCGCAAGCCCTAATTGAGCA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGGCACAACCACTCCTTaGCGGTGCAGCTCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLGTTTP*RCSSRR
Trigger: TCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCATCTGCAAAAGCAACTaGCACAACCACTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSICKSN*HNHSLP
Trigger: CGGCAAGGAGTGGTTGTGCCAGTTGCTTTTGCAGAT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAAACATCTTGAGTGGTaGACTGGGTTTGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSKHLEW*TGFAIA
Trigger: GGCTATGGCAAACCCAGTTCACCACTCAAGATGTTT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTCTGATGAGATGCTTTaGGGGATGCAATGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSDEML*GMQCVL
Trigger: CAGCACACATTGCATCCCTCAAAGCATCTCATCAGA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGCAAGTAGCTGCTCCTaGTGCTCTAGTCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSASSCS*CSSLCS
Trigger: TGAACAAAGACTAGAGCAGCAGGAGCAGCTACTTGC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGTGGTTGGTACAGCTTaGTGTCCAGGGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQVVGTA*CPGFQG
Trigger: TCCCTGGAACCCTGGACAGCAAGCTGTACCAACCAC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAACCACTCCTTGCCGGTaGAGCTCTCGGAGAACATCT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILTTPCR*SSRRTS
Trigger: AGATGTTCTCCGAGAGCTGCACCGGCAAGGAGTGGT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTCCCGGAAGGTCTGTaGGGGTCCACCAGTTGTCAG +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLFPEGL*GSTSCQ
Trigger: CTGACAACTGGTGGACCCGCACAGACCTTCCGGGAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403245.8
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTGGGAGAGTCATGTTaGTTCAATTTGCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLGESC*FNLQAS
Trigger: ACTTGCCTGCAAATTGAATCAACATGACTCTCCCAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTCTGATGGGCTTCCTTaGTGTCATCAAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSDGLP*CHQVPS
Trigger: AGAAGGAACTTGATGACATCAAGGAAGCCCATCAGA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGCGGCAGTAAGCGTTaGAAAATTACCTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSGSKR*KITCWV
Trigger: TACCCAACAGGTAATTTTTCAACGCTTACTGCCGCT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGTAGCTGCTCCTGCTaGTCTAGTCTTTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSSCSC*SSLCSY
Trigger: GTATGAACAAAGACTAGAGCAGCAGGAGCAGCTACT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGTGGTTGGTACAGCTTaGTGTCCAGGGTTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLVVGTA*CPGFQG
Trigger: TCCCTGGAACCCTGGACAGCAAGCTGTACCAACCAC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGATGCTTTGAGGGATaGAATGTGTGCTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSRCFEG*NVCCSI
Trigger: GATACTGCAGCACACATTGCATCCCTCAAAGCATCT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGACCACTCCTTGCCGGTaGAGCTCTCGGAGAACATCT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLTTPCR*SSRRTS
Trigger: AGATGTTCTCCGAGAGCTGCACCGGCAAGGAGTGGT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTTTCTTTGCCCTTTTaGCAGACATTTCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLSLPF*QTFPLC
Trigger: GCAGAGAGGAAATGTCTGCCAAAAGGGCAAAGAAAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCGAGACTACTATGGTTaGGCTCAGAAACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSRDYYG*AQKLLV
Trigger: AACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTTTCACTGAGCTCTTaGTATCTTCCACTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLSLSS*YLPLCY
Trigger: GTAACACAGTGGAAGATATCAAGAGCTCAGTGAAAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCCACTTTCTCAGAGCTaGCAGGTTGTAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSPLSQS*QVVNQN
Trigger: GTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAATTTAGCTTTAGCATaGGCCTGTTCCACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSNLALA*ACSTWN
Trigger: ATTCCAGGTGGAACAGGCTCATGCTAAAGCTAAATT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAATAGGGGAAAGAGTGTaGGCGGCAGTAAGCGTTGAA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQIGERV*AAVSVE
Trigger: TTCAACGCTTACTGCCGCTCACACTCTTTCCCCTAT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATGCTCAATTAGGGCTTaGGCACCCCTCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILCSIRA*APLHLS
Trigger: GGATAAATGGAGGGGTGCGCAAGCCCTAATTGAGCA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATGCTCAATTAGGGCTTaGGCACCCCTCCATTTATCC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQCSIRA*APLHLS
Trigger: GGATAAATGGAGGGGTGCGCAAGCCCTAATTGAGCA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTCAATTTCCTCATTTaGTTCTCTAAGCCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLNFLI*FSKPKC
Trigger: GCACTTCGGCTTAGAGAAGCAAATGAGGAAATTGAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTGCAGGCAAGTAGCTaGTCCTGCTGCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLQASS*SCCSSL
Trigger: AAGACTAGAGCAGCAGGAGCAGCTACTTGCCTGCAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTGCAGGCAAGTAGCTaGTCCTGCTGCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLQASS*SCCSSL
Trigger: AAGACTAGAGCAGCAGGAGCAGCTACTTGCCTGCAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCATGTTGATTCAATTTaGAGGCAAGTAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSHVDSI*RQVAAP
Trigger: AGGAGCAGCTACTTGCCTGCAAATTGAATCAACATG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTCTCTCTGATGAGATaGTTTGAGGGATGCAATGTG +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFSLMR*FEGCNV
Trigger: CACATTGCATCCCTCAAAGCATCTCATCAGAGAGAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCACTCCGAGACTACTATaGTTGAGCTCAGAAACTACT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSTPRLL*LSSETT
Trigger: AGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCATCAGTGAAAGTATGTaGTTGGTACAGCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSISESM*LVQLAV
Trigger: GACAGCAAGCTGTACCAACCACATACTTTCACTGAT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTCATCTAGCTCTTCTTaGGAACAGTTAGCCATAGTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSSSSS*EQLAIV
Trigger: GACTATGGCTAACTGTTCCCAAGAAGAGCTAGATGA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403245.8
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAAACATCTTGAGTGGTaGACTGGGTTTGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQKHLEW*TGFAIA
Trigger: GGCTATGGCAAACCCAGTTCACCACTCAAGATGTTT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGGAAGCTACCTCACTaGATAAACTTTGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSRKLPH*INFGFP
Trigger: AGGAAAACCAAAGTTTATTCAGTGAGGTAGCTTCCT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAAACATGGGAATCAGTaGAAGTATGTGGTTGGTACA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSKHGNQ*KYVVGT
Trigger: TGTACCAACCACATACTTTCACTGATTCCCATGTTT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCTGATGAGATGCTTTaGGGGATGCAATGTGTGCTG +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILSDEML*GMQCVL
Trigger: CAGCACACATTGCATCCCTCAAAGCATCTCATCAGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTTCATAAGCTGTCCTaGCAGTGGCACAATCCCATC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQFHKLS*QWHNPI
Trigger: GATGGGATTGTGCCACTGTCAGGACAGCTTATGAAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTTCTAGCATACAAGTaGGCCCTTCTCTGCTATAAA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFLAYK*ALLCYK
Trigger: TTTATAGCAGAGAAGGGCTCACTTGTATGCTAGAAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTTAGTAGTCAACGGTaGACCAACATACTCATCTTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFSSQR*TNILIF
Trigger: GAAGATGAGTATGTTGGTGCACCGTTGACTACTAAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTTCAACGTCACTACTaGTTTGTCCATAAGAAACAC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLQRHY*FVHKKH
Trigger: GTGTTTCTTATGGACAAAGCAGTAGTGACGTTGAAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTGGTTTATCCAAAGCTaGAGGCTTGATGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSWFIQS*RLDEFC
Trigger: ACAAAACTCATCAAGCCTGCAGCTTTGGATAAACCA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAATGTGGCTTTAATTTaGTCAATTAGGGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSNVALI*SIRACA
Trigger: TGCGCAAGCCCTAATTGAGCAAATTAAAGCCACATT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTCTCTAAGCCGAAGTaGATCTTTATCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFSKPK*IFIQKF
Trigger: GAACTTCTGGATAAAGATGCACTTCGGCTTAGAGAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGCAAGTAGCTGCTCCTaGTGCTCTAGTCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQASSCS*CSSLCS
Trigger: TGAACAAAGACTAGAGCAGCAGGAGCAGCTACTTGC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTGCAGGCAAGTAGCTaGTCCTGCTGCTCTAGTCTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLQASS*SCCSSL
Trigger: AAGACTAGAGCAGCAGGAGCAGCTACTTGCCTGCAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGGATGCAATGTGTGCTaGAGTATCTTCCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQGCNVC*SIFLDP
Trigger: AGGGTCAAGGAAGATACTGCAGCACACATTGCATCC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGAGGGATGCAATGTGTaGTGCAGTATCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILEGCNV*CSIFLD
Trigger: GTCAAGGAAGATACTGCAGCACACATTGCATCCCTC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTGAGTCTAGTTCTGTaGGGAACTTCTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLSLVL*GTSPAH
Trigger: GTGAGCTGGAGAAGTTCCGCACAGAACTAGACTCAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAAGGAGGTGCACTTCTaGCCTTCTTGTATGGTACCT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQKEVHF*PSCMVP
Trigger: AGGTACCATACAAGAAGGCCAGAAGTGCACCTCCTT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGTGAAAGTATGTGGTTaGTACAGCTTGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQVKVCG*YSLLSR
Trigger: CCTGGACAGCAAGCTGTACCAACCACATACTTTCAC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGATCTGCAAAAGCAACTaGCACAACCACTCCTTGCCG +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLICKSN*HNHSLP
Trigger: CGGCAAGGAGTGGTTGTGCCAGTTGCTTTTGCAGAT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGTAGGAGCTAAACAATaGGTACACAGAGACATAAAG +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSVGAKQ*VHRDIK
Trigger: CTTTATGTCTCTGTGTACCCATTGTTTAGCTCCTAC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAAGTACCTCAAACATTaGAAACACTCTGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSKYLKH*KHSASE
Trigger: TTCAGAGGCAGAGTGTTTCCAATGTTTGAGGTACTT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403245.8
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCATTTCCATAACAGGCTaGGAAGTCTTCTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSISITG*EVFFVF
Trigger: GAAAACAAAGAAGACTTCTCAGCCTGTTATGGAAAT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGTAAATCAAAACCACTaGTCCCAAAGGAATCTATTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSVNQNH*SQRNLF
Trigger: GAATAGATTCCTTTGGGATCAGTGGTTTTGATTTAC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCACATGTTGTGAGTCTTaGGACAAAATATTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSTCCES*DKIFGF
Trigger: GAACCCAAATATTTTGTCTCAAGACTCACAACATGT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTGGGAGAGTCATGTTaGTTCAATTTGCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLGESC*FNLQAS
Trigger: ACTTGCCTGCAAATTGAATCAACATGACTCTCCCAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACTGGGAGAGTCATGTTaGTTCAATTTGCAGGCAAGT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLGESC*FNLQAS
Trigger: ACTTGCCTGCAAATTGAATCAACATGACTCTCCCAG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCTGATGGGCTTCCTTaGTGTCATCAAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILSDGLP*CHQVPS
Trigger: AGAAGGAACTTGATGACATCAAGGAAGCCCATCAGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTGCAGTATCTTCCTTaGCCCTTCTCATGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLQYLP*PFSWSF
Trigger: AAAACTCCATGAGAAGGGTCAAGGAAGATACTGCAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACTGCAGTATCTTCCTTaGCCCTTCTCATGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLQYLP*PFSWSF
Trigger: AAAACTCCATGAGAAGGGTCAAGGAAGATACTGCAG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTGCTGTATTATCTGTTaGAGTTCCTGTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSCCIIC*SSCSLC
Trigger: ACAAAGAGAACAGGAACTTCAACAGATAATACAGCA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAGCGGCAGTAAGCGTTaGAAAATTACCTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQSGSKR*KITCWV
Trigger: TACCCAACAGGTAATTTTTCAACGCTTACTGCCGCT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGTATCTACCAACAATTaGCTGGATAAAGAAAACGTG +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSVSTNN*LDKENV
Trigger: CACGTTTTCTTTATCCAGTCAATTGTTGGTAGATAC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGTAGCTGCTCCTGCTaGTCTAGTCTTTGTTCATAC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILSSCSC*SSLCSY
Trigger: GTATGAACAAAGACTAGAGCAGCAGGAGCAGCTACT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGCAAGTAGCTGCTCCTaGTGCTCTAGTCTTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLASSCS*CSSLCS
Trigger: TGAACAAAGACTAGAGCAGCAGGAGCAGCTACTTGC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGGATGCAATGTGTGCTaGAGTATCTTCCTTGACCCT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLGCNVC*SIFLDP
Trigger: AGGGTCAAGGAAGATACTGCAGCACACATTGCATCC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGAGGGATGCAATGTGTaGTGCAGTATCTTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLEGCNV*CSIFLD
Trigger: GTCAAGGAAGATACTGCAGCACACATTGCATCCCTC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTGAGTCTAGTTCTGTaGGGAACTTCTCCAGCTCAC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLSLVL*GTSPAH
Trigger: GTGAGCTGGAGAAGTTCCGCACAGAACTAGACTCAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGGAATCAGTTTCTGTaGGATTTTCAGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSRNQFL*DFQTSY
Trigger: GTAAGAAGTCTGAAAATCCCACAGAAACTGATTCCT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACTTTCTTTGCCCTTTTaGCAGACATTTCCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLSLPF*QTFPLC
Trigger: GCAGAGAGGAAATGTCTGCCAAAAGGGCAAAGAAAG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGTGAAAGTATGTGGTTaGTACAGCTTGCTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLVKVCG*YSLLSR
Trigger: CCTGGACAGCAAGCTGTACCAACCACATACTTTCAC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGAAATGTTTCATCTCTaGTGTATGGTTTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSEMFHL*CMVFFG
Trigger: GCCAAAGAAAACCATACACCAGAGATGAAACATTTC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATCATTTGCAGCAACATaGATAGAGCTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQSFAAT*IELEAI
Trigger: AATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCATTTGCAGCAACATaGATAGAGCTGGAGGCCATT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILSFAAT*IELEAI
Trigger: AATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp CCCACTCCGAGACTACTATGGTTGAGCTCAGAAACTACTAGTTCATTTGTTTCTTCATCTAGCTCTTCTTaGGAACAGTTAGCCATAGTC +
Preference number: 4 (lower is better)
Translates to: PTPRLLWLSSETTSSFVSSSSSS*EQLAIV
Trigger: GACTATGGCTAACTGTTCCCAAGAAGAGCTAGATGA...AGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACGAGACTACTATGGTTaGGCTCAGAAACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQRDYYG*AQKLLV
Trigger: AACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTTGTTCATCAAGATTaGCCTCTGCAACAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLVHQD*PLQQSL
Trigger: TAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACCACTTTCTCAGAGCTaGCAGGTTGTAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILPLSQS*QVVNQN
Trigger: GTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACCACTTTCTCAGAGCTaGCAGGTTGTAAATCAAAAC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQPLSQS*QVVNQN
Trigger: GTTTTGATTTACAACCTGTCAGCTCTGAGAAAGTGG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTCTGATGGGCTTCCTTaGTGTCATCAAGTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLSDGLP*CHQVPS
Trigger: AGAAGGAACTTGATGACATCAAGGAAGCCCATCAGA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAATTTAGCTTTAGCATaGGCCTGTTCCACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILNLALA*ACSTWN
Trigger: ATTCCAGGTGGAACAGGCTCATGCTAAAGCTAAATT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAATTTAGCTTTAGCATaGGCCTGTTCCACCTGGAAT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQNLALA*ACSTWN
Trigger: ATTCCAGGTGGAACAGGCTCATGCTAAAGCTAAATT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACCTCTCCACAGTTTTTaGGAGGTCTTGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQPLHSF*EVLYFS
Trigger: AGAGAAATACAAGACCTCTCAAAAACTGTGGAGAGG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACCTCTCCACAGTTTTTaGGAGGTCTTGTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILPLHSF*EVLYFS
Trigger: AGAGAAATACAAGACCTCTCAAAAACTGTGGAGAGG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTGCAGTATCTTCCTTaGCCCTTCTCATGGAGTTTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLQYLP*PFSWSF
Trigger: AAAACTCCATGAGAAGGGTCAAGGAAGATACTGCAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp ATTAATAATGCATTCCTCTTCTCAAGAGGAGTGTTGAATTCTCCCTCAGAAGGTTCTCAAGAGGAGTGTTaGATTCTCCCTCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: INNAFLFSRGVLNSPSEGSQEEC*ILPQKV
Trigger: AACCTTCTGAGGGAGAATTCAACACTCCTCTTGAGA...ACCTTCTGAGGGAGAATTCAACACTCCTCTTGAGAAGAGGAATGCATTATTAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR GCA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCATCACTGTAATTTTCTaGCAGTTCTTCATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSITVIF*QFFMFR
Trigger: TCGAAACATGAAGAACTGGCAGAAAATTACAGTGAT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTCAATTTCCTCATTTaGTTCTCTAAGCCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLNFLI*FSKPKC
Trigger: GCACTTCGGCTTAGAGAAGCAAATGAGGAAATTGAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACTCAATTTCCTCATTTaGTTCTCTAAGCCGAAGTGC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLNFLI*FSKPKC
Trigger: GCACTTCGGCTTAGAGAAGCAAATGAGGAAATTGAG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTGCATCTTCATCTTTaGCCTCCAGATCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLHLHL*PPDQLL
Trigger: TAGAAGCTGATCTGGAGGGCAAAGATGAAGATGCAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTGCATCTTCATCTTTaGCCTCCAGATCAGCTTCTA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLHLHL*PPDQLL
Trigger: TAGAAGCTGATCTGGAGGGCAAAGATGAAGATGCAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACATGTTGATTCAATTTaGAGGCAAGTAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQHVDSI*RQVAAP
Trigger: AGGAGCAGCTACTTGCCTGCAAATTGAATCAACATG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAGATGCTTTGAGGGATaGAATGTGTGCTGCAGTATC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLRCFEG*NVCCSI
Trigger: GATACTGCAGCACACATTGCATCCCTCAAAGCATCT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTCTCTCTGATGAGATaGTTTGAGGGATGCAATGTG +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQFSLMR*FEGCNV
Trigger: CACATTGCATCCCTCAAAGCATCTCATCAGAGAGAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAACTCCGAGACTACTATaGTTGAGCTCAGAAACTACT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQTPRLL*LSSETT
Trigger: AGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAACTCCGAGACTACTATaGTTGAGCTCAGAAACTACT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILTPRLL*LSSETT
Trigger: AGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCTGGCCTTCTTGTATaGTACCTGTTTACCCATTAC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILSGLLV*YLFTHY
Trigger: GTAATGGGTAAACAGGTACCATACAAGAAGGCCAGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATCTGGCCTTCTTGTATaGTACCTGTTTACCCATTAC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQSGLLV*YLFTHY
Trigger: GTAATGGGTAAACAGGTACCATACAAGAAGGCCAGA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAAGCAATCTGATCTTTaGCTTGGTCCCTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILKQSDL*LGPSLS
Trigger: AGAAAGAGAGGGACCAAGCCAAAGATCAGATTGCTT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTTCTGCCGAATAGATaGATTCCCAGATTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLLPNR*IPRFSF
Trigger: AAAGCTGAATCTGGGAATCCATCTATTCGGCAGAAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAATCAGTGAAAGTATGTaGTTGGTACAGCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILISESM*LVQLAV
Trigger: GACAGCAAGCTGTACCAACCACATACTTTCACTGAT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACTGCTCTTAAGAAATTaGATCTTTTCAGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLLLRN*IFSADS
Trigger: GGAGTCTGCTGAAAAGATTCAATTTCTTAAGAGCAG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCGAGACTACTATGGTTaGGCTCAGAAACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLRDYYG*AQKLLV
Trigger: AACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GCTGAGAAGTCTTCTTTGTTTTCAAATAGCTCACATTTGTTCCAAGAAGTCCTGCGAGACTACTATGGTTaGGCTCAGAAACTACTAGTT +
Preference number: 4 (lower is better)
Translates to: AEKSSLFSNSSHLFQEVLRDYYG*AQKLLV
Trigger: AACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCG...CAGGACTTCTTGGAACAAATGTGAGCTATTTGAAAACAAAGAAGACTTCTCAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTTGTTCATCAAGATTaGCCTCTGCAACAGAGTCTA +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLVHQD*PLQQSL
Trigger: TAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTTTCACTGAGCTCTTaGTATCTTCCACTGTGTTAC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLSLSS*YLPLCY
Trigger: GTAACACAGTGGAAGATATCAAGAGCTCAGTGAAAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACAACTTTCAGTTTTGTaGGCTGGTTTATCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILQLSVL*AGLSKA
Trigger: AGCTTTGGATAAACCAGCTCACAAAACTGAAAGTTG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGGAAGCTACCTCACTaGATAAACTTTGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILRKLPH*INFGFP
Trigger: AGGAAAACCAAAGTTTATTCAGTGAGGTAGCTTCCT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAATTTCTTGTGGGCTCTaGATCTTCAACTACTTGAGA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQISCGL*IFNYLR
Trigger: TCTCAAGTAGTTGAAGATTCAGAGCCCACAAGAAAT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAATTTCTTGTGGGCTCTaGATCTTCAACTACTTGAGA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILISCGL*IFNYLR
Trigger: TCTCAAGTAGTTGAAGATTCAGAGCCCACAAGAAAT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTATCCAGAAGTTCCTaGTTTTCAGCATACCACTGT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLSRSS*FSAYHC
Trigger: ACAGTGGTATGCTGAAAATCAGGAACTTCTGGATAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTATCCAGAAGTTCCTaGTTTTCAGCATACCACTGT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLSRSS*FSAYHC
Trigger: ACAGTGGTATGCTGAAAATCAGGAACTTCTGGATAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAATTCTTCTGTCTTTCTaGAGCCTCTCCACAGTTTTT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILILLSF*SLSTVF
Trigger: AAAAACTGTGGAGAGGCTTCAGAAAGACAGAAGAAT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTGCCCTTTGAGTTCTaGTTTGATAGCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLPFEF*FDSIIL
Trigger: AAGAATGATGCTATCAAATCAGAACTCAAAGGGCAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAAACATGGGAATCAGTaGAAGTATGTGGTTGGTACA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILKHGNQ*KYVVGT
Trigger: TGTACCAACCACATACTTTCACTGATTCCCATGTTT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAAACATGGGAATCAGTaGAAGTATGTGGTTGGTACA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQKHGNQ*KYVVGT
Trigger: TGTACCAACCACATACTTTCACTGATTCCCATGTTT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATGGTTTATCCAAAGCTaGAGGCTTGATGAGTTTTGT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILWFIQS*RLDEFC
Trigger: ACAAAACTCATCAAGCCTGCAGCTTTGGATAAACCA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAATGTGGCTTTAATTTaGTCAATTAGGGCTTGCGCA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILNVALI*SIRACA
Trigger: TGCGCAAGCCCTAATTGAGCAAATTAAAGCCACATT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTCTCTAAGCCGAAGTaGATCTTTATCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILFSKPK*IFIQKF
Trigger: GAACTTCTGGATAAAGATGCACTTCGGCTTAGAGAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTTAAGCGTATCTTCTaGCGAATAGATGGATTCCCA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILFKRIF*RIDGFP
Trigger: TGGGAATCCATCTATTCGGCAGAAGATACGCTTAAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCATGTTGATTCAATTTaGAGGCAAGTAGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLHVDSI*RQVAAP
Trigger: AGGAGCAGCTACTTGCCTGCAAATTGAATCAACATG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATCTTTTCAGCAGACTCCTCTTCTATTTCCATAACAGGCTGAGAAGTCTTCTTACTCCGAGACTACTATaGTTGAGCTCAGAAACTACT +
Preference number: 4 (lower is better)
Translates to: NLFSRLLFYFHNRLRSLLTPRLL*LSSETT
Trigger: AGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGT...AAGAAGACTTCTCAGCCTGTTATGGAAATAGAAGAGGAGTCTGCTGAAAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAAGCAATCTGATCTTTaGCTTGGTCCCTCTCTTTCT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLKQSDL*LGPSLS
Trigger: AGAAAGAGAGGGACCAAGCCAAAGATCAGATTGCTT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTTCTGCCGAATAGATaGATTCCCAGATTCAGCTTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLLPNR*IPRFSF
Trigger: AAAGCTGAATCTGGGAATCCATCTATTCGGCAGAAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGATCAGTGAAAGTATGTaGTTGGTACAGCTTGCTGTC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLISESM*LVQLAV
Trigger: GACAGCAAGCTGTACCAACCACATACTTTCACTGAT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGTAGGAGCTAAACAATaGGTACACAGAGACATAAAG +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQVGAKQ*VHRDIK
Trigger: CTTTATGTCTCTGTGTACCCATTGTTTAGCTCCTAC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
3UTR CAA 72 bp TCTAATGTGTCCAATCCCACTCCGAGACTACTATGGTaGAGCTCAGAAACTACTAGTTCATTTGTTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SNVSNPTPRLLW*SSETTSSFVSK
Trigger: CTTAGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGGATTGGACACATTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAATTTCCATAACAGGCTaGGAAGTCTTCTTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILISITG*EVFFVF
Trigger: GAAAACAAAGAAGACTTCTCAGCCTGTTATGGAAAT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTGCTCTTAAGAAATTaGATCTTTTCAGCAGACTCC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLLLRN*IFSADS
Trigger: GGAGTCTGCTGAAAAGATTCAATTTCTTAAGAGCAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGTAAATCAAAACCACTaGTCCCAAAGGAATCTATTC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQVNQNH*SQRNLF
Trigger: GAATAGATTCCTTTGGGATCAGTGGTTTTGATTTAC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGTAAATCAAAACCACTaGTCCCAAAGGAATCTATTC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILVNQNH*SQRNLF
Trigger: GAATAGATTCCTTTGGGATCAGTGGTTTTGATTTAC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAACATGTTGTGAGTCTTaGGACAAAATATTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILTCCES*DKIFGF
Trigger: GAACCCAAATATTTTGTCTCAAGACTCACAACATGT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCAACTTTCAGTTTTGTaGGCTGGTTTATCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLQLSVL*AGLSKA
Trigger: AGCTTTGGATAAACCAGCTCACAAAACTGAAAGTTG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGATTTCTTGTGGGCTCTaGATCTTCAACTACTTGAGA +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLISCGL*IFNYLR
Trigger: TCTCAAGTAGTTGAAGATTCAGAGCCCACAAGAAAT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGATCTGTAAAATTCTaGTTTCTTGTGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILRSVKF*FLVGSE
Trigger: TTCAGAGCCCACAAGAAATCAGAATTTTACAGATCT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAGATCTGTAAAATTCTaGTTTCTTGTGGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQRSVKF*FLVGSE
Trigger: TTCAGAGCCCACAAGAAATCAGAATTTTACAGATCT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTATCCAGAAGTTCCTaGTTTTCAGCATACCACTGT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLSRSS*FSAYHC
Trigger: ACAGTGGTATGCTGAAAATCAGGAACTTCTGGATAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGATTCTTCTGTCTTTCTaGAGCCTCTCCACAGTTTTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLILLSF*SLSTVF
Trigger: AAAAACTGTGGAGAGGCTTCAGAAAGACAGAAGAAT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTGCCCTTTGAGTTCTaGTTTGATAGCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLPFEF*FDSIIL
Trigger: AAGAATGATGCTATCAAATCAGAACTCAAAGGGCAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATGCTGTATTATCTGTTaGAGTTCCTGTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQCCIIC*SSCSLC
Trigger: ACAAAGAGAACAGGAACTTCAACAGATAATACAGCA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGTATCTACCAACAATTaGCTGGATAAAGAAAACGTG +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQVSTNN*LDKENV
Trigger: CACGTTTTCTTTATCCAGTCAATTGTTGGTAGATAC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp AGTTCATTTGTTTCTAAGCTATCAGTACTTAAGAGAGAGGTTCCACTGCTCTTAAAGGTTCTACACTCTTaGTACAGGAATCACGTCTTG +
Preference number: 4 (lower is better)
Translates to: SSFVSKLSVLKREVPLLLKVLHS*YRNHVL
Trigger: CAAGACGTGATTCCTGTATCAAGAGTGTAGAACCTT...TAAGAGCAGTGGAACCTCTCTCTTAAGTACTGATAGCTTAGAAACAAATGAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTTAGTAGTCAACGGTaGACCAACATACTCATCTTC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLFSSQR*TNILIF
Trigger: GAAGATGAGTATGTTGGTGCACCGTTGACTACTAAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTCTCTAAGCCGAAGTaGATCTTTATCCAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLFSKPK*IFIQKF
Trigger: GAACTTCTGGATAAAGATGCACTTCGGCTTAGAGAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACAGTTAGTTCTGCGTTaGCTTGATTACTATGTAAAG +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILQLVLR*LDYYVK
Trigger: CTTTACATAGTAATCAAGCCAACGCAGAACTAACTG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATACTTCAGTTACTTGTaGACAGCTGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQYFSYL*TAVFHT
Trigger: AGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACAACATGTTCTTCTGTaGCAGTTACTTCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILQHVLL*QLLQLL
Trigger: AAGTAACTGAAGTAACTGCCACAGAAGAACATGTTG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGGAATCAGTTTCTGTaGGATTTTCAGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILRNQFL*DFQTSY
Trigger: GTAAGAAGTCTGAAAATCCCACAGAAACTGATTCCT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGAAATGTTTCATCTCTaGTGTATGGTTTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILEMFHL*CMVFFG
Trigger: GCCAAAGAAAACCATACACCAGAGATGAAACATTTC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGAAATGTTTCATCTCTaGTGTATGGTTTTCTTTGGC +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQEMFHL*CMVFFG
Trigger: GCCAAAGAAAACCATACACCAGAGATGAAACATTTC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGTAGGAGCTAAACAATaGGTACACAGAGACATAAAG +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLVGAKQ*VHRDIK
Trigger: CTTTATGTCTCTGTGTACCCATTGTTTAGCTCCTAC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGACATGTTGTGAGTCTTaGGACAAAATATTTGGGTTC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLTCCES*DKIFGF
Trigger: GAACCCAAATATTTTGTCTCAAGACTCACAACATGT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR TCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTGCTGTATTATCTGTTaGAGTTCCTGTTCTCTTTGT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLCCIIC*SSCSLC
Trigger: ACAAAGAGAACAGGAACTTCAACAGATAATACAGCA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAATCACTGTAATTTTCTaGCAGTTCTTCATGTTTCGA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILITVIF*QFFMFR
Trigger: TCGAAACATGAAGAACTGGCAGAAAATTACAGTGAT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTGTTTCTTCAAAGCTaGTTAACTTGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILLFLQS*LTWLEE
Trigger: TTCTTCAAGCCAAGTTAAGCAGCTTTGAAGAAACAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTGTTTCTTCAAAGCTaGTTAACTTGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLFLQS*LTWLEE
Trigger: TTCTTCAAGCCAAGTTAAGCAGCTTTGAAGAAACAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTACTTCAGTTACTTGTaGACAGCTGTTTTCCATACT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLYFSYL*TAVFHT
Trigger: AGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCAACATGTTCTTCTGTaGCAGTTACTTCAGTTACTT +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLQHVLL*QLLQLL
Trigger: AAGTAACTGAAGTAACTGCCACAGAAGAACATGTTG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAGGAATCAGTTTCTGTaGGATTTTCAGACTTCTTAC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLRNQFL*DFQTSY
Trigger: GTAAGAAGTCTGAAAATCCCACAGAAACTGATTCCT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCAGTTTCTACTACTTaGTGTGTTTGCTGTATTATC +
Preference number: 4 (lower is better)
Translates to: NEIMSFAATWIELEAIILSVSTT*CVCCII
Trigger: GATAATACAGCAAACACACCAAGTAGTAGAAACTGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATGGTTGTTTGCTTTCTaGAAACATATTGGAACACTT +
Preference number: 4 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQWLFAF*KHIGTL
Trigger: AAGTGTTCCAATATGTTTCCAGAAAGCAAACAACCA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GCTCACATTTGTTCCAAGAAGTCCTGTCTTAAGATTAATAATGCATTCCTCTTCAAGTACCTCAAACATTaGAAACACTCTGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AHICSKKSCLKINNAFLFKYLKH*KHSASE
Trigger: TTCAGAGGCAGAGTGTTTCCAATGTTTGAGGTACTT...GAAGAGGAATGCATTATTAATCTTAAGACAGGACTTCTTGGAACAAATGTGAGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR GCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTGTTTCTTCAAAGCTaGTTAACTTGGCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLFLQS*LTWLEE
Trigger: TTCTTCAAGCCAAGTTAAGCAGCTTTGAAGAAACAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CCA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTCAGTTTCTACTACTTaGTGTGTTTGCTGTATTATC +
Preference number: 4 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLSVSTT*CVCCII
Trigger: GATAATACAGCAAACACACCAAGTAGTAGAAACTGA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR GCA 90 bp GAAACTACTAGTTCATTTGTTTCTAAGCTATCAGTACTTAAGAGAGAGGTTCCAACAGGAATCACGTCTTaGCTTTTCATAATAATGCCA +
Preference number: 4 (lower is better)
Translates to: ETTSSFVSKLSVLKREVPTGITS*LFIIMP
Trigger: TGGCATTATTATGAAAAGGCAAGACGTGATTCCTGT...TGGAACCTCTCTCTTAAGTACTGATAGCTTAGAAACAAATGAACTAGTAGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTGGCACAACCACTCCTaGCCGGTGCAGCTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSWHNHS*PVQLSE
Trigger: CTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCCA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTGGCACAACCACTCCTaGCCGGTGCAGCTCTCGGAG +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLWHNHS*PVQLSE
Trigger: CTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCCA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS GCA 90 bp GCCGGTGCAGCTCTCGGAGAACATCTAATATTGAGTCTAGTTCTGTaGGGAACTTCTCCAGCTCACGATTCTTTAACTGTGCCAGTCTTT +
Preference number: 5 (lower is better)
Translates to: AGAALGEHLILSLVL*GTSPAHDSLTVPVF
Trigger: AAAGACTGGCACAGTTAAAGAATCGTGAGCTGGAGAAGTTCCGCACAGAACTAGACTCAATATTAGATGTTCTCCGAGAGCTGCACCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS GCA 90 bp TTCATTTCATCTGCAAAAGCAACTGGCACAACCACTCCTTGCCGGTaGAGCTCTCGGAGAACATCTAATATTGAGTCTAGTTCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: FISSAKATGTTTPCR*SSRRTSNIESSSVR
Trigger: CCGCACAGAACTAGACTCAATATTAGATGTTCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCCAGTTGCTTTTGCAGATGAAATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGCACTTCTGGCCTTCTaGTATGGTACCTGTTTACCC +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSALLAF*YGTCLP
Trigger: GGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTGTGGTTGGTACAGCTaGCTGTCCAGGGTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLCGWYS*LSRVPG
Trigger: CCCTGGAACCCTGGACAGCAAGCTGTACCAACCACA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGTGAAAGTATGTGGTaGGTACAGCTTGCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSESMW*VQLAVQ
Trigger: CTGGACAGCAAGCTGTACCAACCACATACTTTCACT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS TCA 90 bp CTTGCTGTCCAGGGTTCCAGGGAAGGAGTTAGCATTTCCTTTACTTaGGTGCAAAACATCTTTCTTTGCCCTTTTGGCAGACATTTCCTC +
Preference number: 5 (lower is better)
Translates to: LAVQGSREGVSISFT*VQNIFLCPFGRHFL
Trigger: GAGGAAATGTCTGCCAAAAGGGCAAAGAAAGATGTTTTGCACTCAAGTAAAGGAAATGCTAACTCCTTCCCTGGAACCCTGGACAGCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS GCA 90 bp CTGTCCAGGGTTCCAGGGAAGGAGTTAGCATTTCCTTTACTTGAGTaGAAAACATCTTTCTTTGCCCTTTTGGCAGACATTTCCTCTCTG +
Preference number: 5 (lower is better)
Translates to: LSRVPGKELAFPLLE*KTSFFALLADISSL
Trigger: CAGAGAGGAAATGTCTGCCAAAAGGGCAAAGAAAGATGTTTTGCACTCAAGTAAAGGAAATGCTAACTCCTTCCCTGGAACCCTGGACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTTGCATCTTCATCTTaGCCCTCCAGATCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFASSS*PSRSAS
Trigger: AGAAGCTGATCTGGAGGGCAAAGATGAAGATGCAAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTCTGGGAGAGTCATGTaGATTCAATTTGCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSGRVM*IQFAGK
Trigger: CTTGCCTGCAAATTGAATCAACATGACTCTCCCAGA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS TCA 90 bp TCATCAAGTTCCTTCTCTAGGGCTTTAATTCTGGGAGAGTCATGTTaGTTCAATTTGCAGGCAAGTAGCTGCTCCTGCTGCTCTAGTCTT +
Preference number: 5 (lower is better)
Translates to: SSSSFSRALILGESC*FNLQASSCSCCSSL
Trigger: AAGACTAGAGCAGCAGGAGCAGCTACTTGCCTGCAAATTGAATCAACATGACTCTCCCAGAATTAAAGCCCTAGAGAAGGAACTTGATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCCTTTCACTGAGCTCTaGATATCTTCCACTGTGTTA +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSPFTEL*ISSTVL
Trigger: TAACACAGTGGAAGATATCAAGAGCTCAGTGAAAGG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAGAGTAGAAAACATCTaGAGTGGTGAACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSRVENI*SGELGL
Trigger: CAAACCCAGTTCACCACTCAAGATGTTTTCTACTCT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAATCTGATCTTTGGCTaGGTCCCTCTCTTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSNLIFG*VPLFLH
Trigger: ATGAAGAAAGAGAGGGACCAAGCCAAAGATCAGATT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTTCCATTTCCTTAACTaGTCGCTCCAGATCCTGAAT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSFHFLN*SLQILN
Trigger: ATTCAGGATCTGGAGCGACAAGTTAAGGAAATGGAA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCATTTTCTGAAACTGTaGTTCCATGGTACGAAGGCT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSHFLKL*FHGTKA
Trigger: AGCCTTCGTACCATGGAACAACAGTTTCAGAAAATG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGGAGAACATCTAATATaGAGTCTAGTTCTGTGCGGA +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSGEHLI*SLVLCG
Trigger: TCCGCACAGAACTAGACTCAATATTAGATGTTCTCC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS GCA 90 bp ATGAAATCTGAATTTCTATTAATACTCTGGTGCATTCATTTCATCTaGAAAAGCAACTGGCACAACCACTCCTTGCCGGTGCAGCTCTCG +
Preference number: 5 (lower is better)
Translates to: MKSEFLLILWCIHFI*KSNWHNHSLPVQLS
Trigger: CGAGAGCTGCACCGGCAAGGAGTGGTTGTGCCAGTTGCTTTTGCAGATGAAATGAATGCACCAGAGTATTAATAGAAATTCAGATTTCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS CCA 90 bp TCTTGTAAAACTTCTGAAACATGGGAATCAGTGAAAGTATGTGGTTaGTACAGCTTGCTGTCCAGGGTTCCAGGGAAGGAGTTAGCATTT +
Preference number: 5 (lower is better)
Translates to: SCKTSETWESVKVCG*YSLLSRVPGKELAF
Trigger: AAATGCTAACTCCTTCCCTGGAACCCTGGACAGCAAGCTGTACCAACCACATACTTTCACTGATTCCCATGTTTCAGAAGTTTTACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTTGAGACAAAATATTaGGGTTCATCTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLETKY*GSSSGV
Trigger: TACCCCTGAAGATGAACCCAAATATTTTGTCTCAAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGCACTTCTGGCCTTCTaGTATGGTACCTGTTTACCC +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLALLAF*YGTCLP
Trigger: GGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCGCAAAACATCTTTCTTaGCCCTTTTGGCAGACATTT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSAKHLS*PFWQTF
Trigger: AAATGTCTGCCAAAAGGGCAAAGAAAGATGTTTTGC...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGCTGCAGTATCTTCCTaGACCCTTCTCATGGAGTTT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILAAVSS*TLLMEF
Trigger: AAACTCCATGAGAAGGGTCAAGGAAGATACTGCAGC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGCTGCAGTATCTTCCTaGACCCTTCTCATGGAGTTT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQAAVSS*TLLMEF
Trigger: AAACTCCATGAGAAGGGTCAAGGAAGATACTGCAGC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTCAAATAGCTCACATTaGTTCCAAGAAGTCAGTGAA +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSNSSH*FQEVSE
Trigger: TTCACTGACTTCTTGGAACAAATGTGAGCTATTTGA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257766.8
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACCGAGACTACTATGGTaGAGCTCAGAAACTACTAGT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQPRLLW*SSETTS
Trigger: ACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTCGTTCATTTTCCTGTaGATATCCTTGAAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSSFIFL*ISLKKC
Trigger: ACACTTCTTCAAGGATATCAACAGGAAAATGAACGA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCAAGAGCTTGTTTGTCTaGTTTCAGTCTTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSKSLFV*FQSFDV
Trigger: GACATCAAAAGACTGAAACAAGACAAACAAGCTCTT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCACTTCAAGAGCTTGTTaGTCTTGTTTCAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSTSRAC*SCFSLL
Trigger: CAAAAGACTGAAACAAGACAAACAAGCTCTTGAAGT...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTTGCATCTTCATCTTaGCCCTCCAGATCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILFASSS*PSRSAS
Trigger: AGAAGCTGATCTGGAGGGCAAAGATGAAGATGCAAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCTGGGAGAGTCATGTaGATTCAATTTGCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILSGRVM*IQFAGK
Trigger: CTTGCCTGCAAATTGAATCAACATGACTCTCCCAGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAGTGAAAGTATGTGGTaGGTACAGCTTGCTGTCCAG +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLSESMW*VQLAVQ
Trigger: CTGGACAGCAAGCTGTACCAACCACATACTTTCACT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCATGGAGTTTTCAAATaGATTCATCACTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSHGVFK*IHHCFR
Trigger: TCTGAAGCAGTGATGAATCAATTTGAAAACTCCATG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCCTGCAGCTCATTAACTaGACTTTGGAAATGTCTTAT +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSLQLIN*TLEMSY
Trigger: ATAAGACATTTCCAAAGTCAAGTTAATGAGCTGCAG...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTACTACTTGGTGTGTTaGCTGTATTATCTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSYYLVC*LYYLLK
Trigger: CTTCAACAGATAATACAGCAAACACACCAAGTAGTA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp ATAAAGATGGAGATAACAGACACTGGGGACTCCAATAGGGGAAAGAGTGTGAGCTGTTGCTTTGGTTGTTaGCTTTCTGGAAACATATTG +
Preference number: 5 (lower is better)
Translates to: IKMEITDTGDSNRGKSVSCCFGC*LSGNIL
Trigger: CAATATGTTTCCAGAAAGCAAACAACCAAAGCAACA...GCTCACACTCTTTCCCCTATTGGAGTCCCCAGTGTCTGTTATCTCCATCTTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS TCA 90 bp TTAATCTGTAGTTTTCTTGTAAAACTTCTGAAACATGGGAATCAGTaGAAGTATGTGGTTGGTACAGCTTGCTGTCCAGGGTTCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LICSFLVKLLKHGNQ*KYVVGTACCPGFQG
Trigger: TCCCTGGAACCCTGGACAGCAAGCTGTACCAACCACATACTTTCACTGATTCCCATGTTTCAGAAGTTTTACAAGAAAACTACAGATTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCTTGTTCATCAAGATaGACCTCTGCAACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILSCSSR*TSATES
Trigger: AGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATCTTGTTCATCAAGATaGACCTCTGCAACAGAGTCT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQSCSSR*TSATES
Trigger: AGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACCTTTCACTGAGCTCTaGATATCTTCCACTGTGTTA +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQPFTEL*ISSTVL
Trigger: TAACACAGTGGAAGATATCAAGAGCTCAGTGAAAGG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGAGTAGAAAACATCTaGAGTGGTGAACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILRVENI*SGELGL
Trigger: CAAACCCAGTTCACCACTCAAGATGTTTTCTACTCT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAATCTGATCTTTGGCTaGGTCCCTCTCTTTCTTCAT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQNLIFG*VPLFLH
Trigger: ATGAAGAAAGAGAGGGACCAAGCCAAAGATCAGATT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATTCCATTTCCTTAACTaGTCGCTCCAGATCCTGAAT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILFHFLN*SLQILN
Trigger: ATTCAGGATCTGGAGCGACAAGTTAAGGAAATGGAA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTTGCATCTTCATCTTaGCCCTCCAGATCAGCTTCT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLFASSS*PSRSAS
Trigger: AGAAGCTGATCTGGAGGGCAAAGATGAAGATGCAAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACATTTTCTGAAACTGTaGTTCCATGGTACGAAGGCT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILHFLKL*FHGTKA
Trigger: AGCCTTCGTACCATGGAACAACAGTTTCAGAAAATG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTCTGGGAGAGTCATGTaGATTCAATTTGCAGGCAAG +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLSGRVM*IQFAGK
Trigger: CTTGCCTGCAAATTGAATCAACATGACTCTCCCAGA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAACTACGAGAGACTCTaGTTTACTCTGCAGCTCATT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILNYERL*FTLQLI
Trigger: AATGAGCTGCAGAGTAAACAAGAGTCTCTCGTAGTT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGGAGAACATCTAATATaGAGTCTAGTTCTGTGCGGA +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQGEHLI*SLVLCG
Trigger: TCCGCACAGAACTAGACTCAATATTAGATGTTCTCC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS TCA 90 bp CTTGTTCTTCTAATGTGTCCAATCCCACTCCGAGACTACTATGGTTaGGCTCAGAAACTACTAGTTCATTTGTTTCTAAGCTATCAGTAC +
Preference number: 5 (lower is better)
Translates to: LVLLMCPIPLRDYYG*AQKLLVHLFLSYQY
Trigger: GTACTGATAGCTTAGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGGATTGGACACATTAGAAGAACAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS GCA 90 bp AGTGCAAAACATCTTTCTTTGCCCTTTTGGCAGACATTTCCTCTCTaGCCTTTGAGTTCTGATTTGATAGCATCATTCTTCTGTCTTTCT +
Preference number: 5 (lower is better)
Translates to: SAKHLSLPFWQTFPL*PLSSDLIASFFCLS
Trigger: AGAAAGACAGAAGAATGATGCTATCAAATCAGAACTCAAAGGGCAGAGAGGAAATGTCTGCCAAAAGGGCAAAGAAAGATGTTTTGCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS CCA 90 bp TCCTCTTGTTCTTCTAATGTGTCCAATCCCACTCCGAGACTACTATaGTTGAGCTCAGAAACTACTAGTTCATTTGTTTCTAAGCTATCA +
Preference number: 5 (lower is better)
Translates to: SSCSSNVSNPTPRLL*LSSETTSSFVSKLS
Trigger: TGATAGCTTAGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGGATTGGACACATTAGAAGAACAAGAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTTGAGACAAAATATTaGGGTTCATCTTCAGGGGTA +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLETKY*GSSSGV
Trigger: TACCCCTGAAGATGAACCCAAATATTTTGTCTCAAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAGTTACTTCAGTTACTaGTGGACAGCTGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQSYFSY*WTAVFH
Trigger: ATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAGTTACTTCAGTTACTaGTGGACAGCTGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILSYFSY*WTAVFH
Trigger: ATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAGAGTAGAAAACATCTaGAGTGGTGAACTGGGTTTG +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLRVENI*SGELGL
Trigger: CAAACCCAGTTCACCACTCAAGATGTTTTCTACTCT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATTCCTGTTGATATCCTaGAAGAAGTGTCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQFLLIS*KKCLLF
Trigger: GAACAAGAGACACTTCTTCAAGGATATCAACAGGAA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACGCTCCTCATTTTTCTaGTTTTGTTCTTGGAGATCT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQRSSFF*FCSWRS
Trigger: AGATCTCCAAGAACAAAACAAGAAAAATGAGGAGCG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGCAGCCAGTTCTTCATaGAGTCTTACTAATTTAGCT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILAASSS*SLTNLA
Trigger: AGCTAAATTAGTAAGACTCAATGAAGAACTGGCTGC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGCAAAACATCTTTCTTaGCCCTTTTGGCAGACATTT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILAKHLS*PFWQTF
Trigger: AAATGTCTGCCAAAAGGGCAAAGAAAGATGTTTTGC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAACTACGAGAGACTCTaGTTTACTCTGCAGCTCATT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLNYERL*FTLQLI
Trigger: AATGAGCTGCAGAGTAAACAAGAGTCTCTCGTAGTT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GCTCACATTTGTTCCAAGAAGTCCTGTCTTAAGATTAATAATGCATTCCTCTTCTTCTCAAGAGGAGTGTaGAATTCTCCCTCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: AHICSKKSCLKINNAFLFFSRGV*NSPSEG
Trigger: ACCTTCTGAGGGAGAATTCAACACTCCTCTTGAGAA...GAAGAGGAATGCATTATTAATCTTAAGACAGGACTTCTTGGAACAAATGTGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAGCTGAGAAGTCTTCTTaGTTTTCAAATAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQAEKSS*FSNSSH
Trigger: ATGTGAGCTATTTGAAAACAAAGAAGACTTCTCAGC...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGAGTTACTTCAGTTACTaGTGGACAGCTGTTTTCCAT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLSYFSY*WTAVFH
Trigger: ATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACT...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTTCCTGTTGATATCCTaGAAGAAGTGTCTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLFLLIS*KKCLLF
Trigger: GAACAAGAGACACTTCTTCAAGGATATCAACAGGAA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATCGTTCATTTTCCTGTaGATATCCTTGAAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQSFIFL*ISLKKC
Trigger: ACACTTCTTCAAGGATATCAACAGGAAAATGAACGA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCGTTCATTTTCCTGTaGATATCCTTGAAGAAGTGT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILSFIFL*ISLKKC
Trigger: ACACTTCTTCAAGGATATCAACAGGAAAATGAACGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCGCTCCTCATTTTTCTaGTTTTGTTCTTGGAGATCT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLRSSFF*FCSWRS
Trigger: AGATCTCCAAGAACAAAACAAGAAAAATGAGGAGCG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAGACAGAAAACGACTTTaGTGCATCTGTTCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILDRKRL*CICSFK
Trigger: CTTAAAAGAACAGATGCACAAAAGTCGTTTTCTGTC...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAAAGAGCTTGTTTGTCTaGTTTCAGTCTTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILKSLFV*FQSFDV
Trigger: GACATCAAAAGACTGAAACAAGACAAACAAGCTCTT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAAAGAGCTTGTTTGTCTaGTTTCAGTCTTTTGATGTC +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQKSLFV*FQSFDV
Trigger: GACATCAAAAGACTGAAACAAGACAAACAAGCTCTT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAAACTTCAAGAGCTTGTTaGTCTTGTTTCAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQTSRAC*SCFSLL
Trigger: CAAAAGACTGAAACAAGACAAACAAGCTCTTGAAGT...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTAACTTCAAGAGCTTGTTaGTCTTGTTTCAGTCTTTTG +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILTSRAC*SCFSLL
Trigger: CAAAAGACTGAAACAAGACAAACAAGCTCTTGAAGT...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGCAGCCAGTTCTTCATaGAGTCTTACTAATTTAGCT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLAASSS*SLTNLA
Trigger: AGCTAAATTAGTAAGACTCAATGAAGAACTGGCTGC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTACCTTTGAGTTCTGATTaGATAGCATCATTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILPLSSD*IASFFC
Trigger: ACAGAAGAATGATGCTATCAAATCAGAACTCAAAGG...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATACTACTTGGTGTGTTaGCTGTATTATCTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQYYLVC*LYYLLK
Trigger: CTTCAACAGATAATACAGCAAACACACCAAGTAGTA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATACTACTTGGTGTGTTaGCTGTATTATCTGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILYYLVC*LYYLLK
Trigger: CTTCAACAGATAATACAGCAAACACACCAAGTAGTA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAACTCAGTTTCTACTACTaGGTGTGTTTGCTGTATTAT +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQLSFYY*VCLLYY
Trigger: ATAATACAGCAAACACACCAAGTAGTAGAAACTGAG...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GGTACACTAGAAGCCCAATTCCCACCATTATTCAATACACCCATGTTACAACAATGTTGCTTTGGTTGTTaGCTTTCTGGAAACATATTG +
Preference number: 5 (lower is better)
Translates to: GTLEAQFPPLFNTPMLQQCCFGC*LSGNIL
Trigger: CAATATGTTTCCAGAAAGCAAACAACCAAAGCAACA...TTGTTGTAACATGGGTGTATTGAATAATGGTGGGAATTGGGCTTCTAGTGTACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp AATGAAATCATGTCATTTGCAGCAACATGGATAGAGCTGGAGGCCATTATCCTATCAAATAGCTCACATTaGTTCCAAGAAGTCCATCAT +
Preference number: 5 (lower is better)
Translates to: NEIMSFAATWIELEAIILSNSSH*FQEVHH
Trigger: ATGATGGACTTCTTGGAACAAATGTGAGCTATTTGA...TAGGATAATGGCCTCCAGCTCTATCCATGTTGCTGCAAATGACATGATTTCATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403245.8
CDS-3UTR CAA 90 bp TCCACTGCTCTTAAGAAATTGAATCTTTTCAGCAGACTCCTCTTCTATTTCCATGAAGGTTCTACACTCTaGATACAGGAATCACGTCTT +
Preference number: 5 (lower is better)
Translates to: STALKKLNLFSRLLFYFHEGSTL*IQESRL
Trigger: AAGACGTGATTCCTGTATCAAGAGTGTAGAACCTTC...ATGGAAATAGAAGAGGAGTCTGCTGAAAAGATTCAATTTCTTAAGAGCAGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR CAA 90 bp ATTAATAATGCATTCCTCTTCTCAAGAGGAGTGTTGAATTCTCCCTCAGAAGGTTCAAATAGCTCACATTaGTTCCAAGAAGTCCTGTCT +
Preference number: 5 (lower is better)
Translates to: INNAFLFSRGVLNSPSEGSNSSH*FQEVLS
Trigger: AGACAGGACTTCTTGGAACAAATGTGAGCTATTTGA...ACCTTCTGAGGGAGAATTCAACACTCCTCTTGAGAAGAGGAATGCATTATTAAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGTCAAATAGCTCACATTaGTTCCAAGAAGTCCTAGGT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLSNSSH*FQEVLG
Trigger: ACCTAGGACTTCTTGGAACAAATGTGAGCTATTTGA...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGCTGAGAAGTCTTCTTaGTTTTCAAATAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLAEKSS*FSNSSH
Trigger: ATGTGAGCTATTTGAAAACAAAGAAGACTTCTCAGC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGACAGAAAACGACTTTaGTGCATCTGTTCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLDRKRL*CICSFK
Trigger: CTTAAAAGAACAGATGCACAAAAGTCGTTTTCTGTC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCCTTTGAGTTCTGATTaGATAGCATCATTCTTCTGT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLPLSSD*IASFFC
Trigger: ACAGAAGAATGATGCTATCAAATCAGAACTCAAAGG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCATGGAGTTTTCAAATaGATTCATCACTGCTTCAGA +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLHGVFK*IHHCFR
Trigger: TCTGAAGCAGTGATGAATCAATTTGAAAACTCCATG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTGCAGCTCATTAACTaGACTTTGGAAATGTCTTAT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLQLIN*TLEMSY
Trigger: ATAAGACATTTCCAAAGTCAAGTTAATGAGCTGCAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGCTCAGTTTCTACTACTaGGTGTGTTTGCTGTATTAT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLLSFYY*VCLLYY
Trigger: ATAATACAGCAAACACACCAAGTAGTAGAAACTGAG...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GAGCCCTTCTCTGCTATAAAGGAAACTGTCCATAAATCACTTAAAATGAGACTGGAAATGTTGCTTTGGTaGTTTGCTTTCTGGAAACAT +
Preference number: 5 (lower is better)
Translates to: EPFSAIKETVHKSLKMRLEMLLW*FAFWKH
Trigger: ATGTTTCCAGAAAGCAAACAACCAAAGCAACATTTC...CAGTCTCATTTTAAGTGATTTATGGACAGTTTCCTTTATAGCAGAGAAGGGCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000617909.1
CDS-3UTR CAA 90 bp GCTCACATTTGTTCCAAGAAGTCCTGTCTTAAGATTAATAATGCATTCCTCTTCTACAGGAATCACGTCTaGCCTTTTCATAATAATGCC +
Preference number: 5 (lower is better)
Translates to: AHICSKKSCLKINNAFLFYRNHV*PFHNNA
Trigger: GGCATTATTATGAAAAGGCAAGACGTGATTCCTGTA...GAAGAGGAATGCATTATTAATCTTAAGACAGGACTTCTTGGAACAAATGTGAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS-3UTR CAA 90 bp GAAACTACTAGTTCATTTGTTTCTAAGCTATCAGTACTTAAGAGAGAGGTTCCAGCTGAGAAGTCTTCTTaGTTTTCAAATAGCTCACAT +
Preference number: 5 (lower is better)
Translates to: ETTSSFVSKLSVLKREVPAEKSS*FSNSSH
Trigger: ATGTGAGCTATTTGAAAACAAAGAAGACTTCTCAGC...TGGAACCTCTCTCTTAAGTACTGATAGCTTAGAAACAAATGAACTAGTAGTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS CAA 72 bp CTCCTTGCCGGTGCAGCTCTCGGAGAACATCTAATATaGAGTCTAGTTCTGTGCGGAACTTCTCCAGCTCAC +
Preference number: 6 (lower is better)
Translates to: LLAGAALGEHLI*SLVLCGTSPAH
Trigger: GTGAGCTGGAGAAGTTCCGCACAGAACTAGACTCAATATTAGATGTTCTCCGAGAGCTGCACCGGCAAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS CAA 90 bp GCACAACCACTCCTTGCCGGTGCAGCTCTCGGAGAACATCTAATATaGAGTCTAGTTCTGTGCGGAACTTCTCCAGCTCACGATTCTTTA +
Preference number: 6 (lower is better)
Translates to: AQPLLAGAALGEHLI*SLVLCGTSPAHDSL
Trigger: TAAAGAATCGTGAGCTGGAGAAGTTCCGCACAGAACTAGACTCAATATTAGATGTTCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS GCA 72 bp TCTGCAAAAGCAACTGGCACAACCACTCCTTGCCGGTaGAGCTCTCGGAGAACATCTAATATTGAGTCTAGT +
Preference number: 6 (lower is better)
Translates to: SAKATGTTTPCR*SSRRTSNIESS
Trigger: ACTAGACTCAATATTAGATGTTCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCCAGTTGCTTTTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS GCA 72 bp ATTTCATCTGCAAAAGCAACTGGCACAACCACTCCTTaGCGGTGCAGCTCTCGGAGAACATCTAATATTGAG +
Preference number: 6 (lower is better)
Translates to: ISSAKATGTTTP*RCSSRRTSNIE
Trigger: CTCAATATTAGATGTTCTCCGAGAGCTGCACCGGCAAGGAGTGGTTGTGCCAGTTGCTTTTGCAGATGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS GCA 72 bp TCTCTGATGAGATGCTTTGAGGGATGCAATGTGTGCTaGAGTATCTTCCTTGACCCTTCTCATGGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: SLMRCFEGCNVC*SIFLDPSHGVF
Trigger: GAAAACTCCATGAGAAGGGTCAAGGAAGATACTGCAGCACACATTGCATCCCTCAAAGCATCTCATCAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS TCA 72 bp GACTTCTTACGAGTAGACAGGCAACTTTCAGTTTTGTaGGCTGGTTTATCCAAAGCTGCAGGCTTGATGAGT +
Preference number: 6 (lower is better)
Translates to: DFLRVDRQLSVL*AGLSKAAGLMS
Trigger: ACTCATCAAGCCTGCAGCTTTGGATAAACCAGCTCACAAAACTGAAAGTTGCCTGTCTACTCGTAAGAAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000497936.5
ENST00000617909.1
CDS GCA 72 bp GCTCTCGGAGAACATCTAATATTGAGTCTAGTTCTGTaGGGAACTTCTCCAGCTCACGATTCTTTAACTGTG +
Preference number: 6 (lower is better)
Translates to: ALGEHLILSLVL*GTSPAHDSLTV
Trigger: CACAGTTAAAGAATCGTGAGCTGGAGAAGTTCCGCACAGAACTAGACTCAATATTAGATGTTCTCCGAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS CAA 72 bp TTCCTTTTAAGTAAAGGAGGTGCACTTCTGGCCTTCTaGTATGGTACCTGTTTACCCATTACAGCCCCTTCT +
Preference number: 6 (lower is better)
Translates to: FLLSKGGALLAF*YGTCLPITAPS
Trigger: AGAAGGGGCTGTAATGGGTAAACAGGTACCATACAAGAAGGCCAGAAGTGCACCTCCTTTACTTAAAAGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000497936.5
ENST00000617909.1
CDS CAA 72 bp TCTGAAACTGTTGTTCCATGGTACGAAGGCTTTTCTTaGCATCTTCATCTTTGCCCTCCAGATCAGCTTCTA +
Preference number: 6 (lower is better)
Translates to: SETVVPWYEGFS*HLHLCPPDQLL
Trigger: TAGAAGCTGATCTGGAGGGCAAAGATGAAGATGCAAAGAAAAGCCTTCGTACCATGGAACAACAGTTTCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS TCA 72 bp GAAGTCAGTGAAACAGCAGCTAAAATCTTTGAGGAATaGGGAGGAATAACCCGGAGTTCAGTAGATAACATC +
Preference number: 6 (lower is better)
Translates to: EVSETAAKIFEE*GGITRSSVDNI
Trigger: GATGTTATCTACTGAACTCCGGGTTATTCCTCCTCATTCCTCAAAGATTTTAGCTGCTGTTTCACTGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257766.8
CDS TCA 72 bp AGTTTTCTTGTAAAACTTCTGAAACATGGGAATCAGTaGAAGTATGTGGTTGGTACAGCTTGCTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: SFLVKLLKHGNQ*KYVVGTACCPG
Trigger: CCCTGGACAGCAAGCTGTACCAACCACATACTTTCACTGATTCCCATGTTTCAGAAGTTTTACAAGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS GCA 72 bp GACAATAAGCTTGATGTAGGGCTTCAACGTCACTACTaGTTTGTCCATAAGAAACACCTGTTCCTGTCATTT +
Preference number: 6 (lower is better)
Translates to: DNKLDVGLQRHY*FVHKKHLFLSF
Trigger: AAATGACAGGAACAGGTGTTTCTTATGGACAAAGCAGTAGTGACGTTGAAGCCCTACATCAAGCTTATTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS GCA 72 bp TTGGCATCTGCTGCTTTATCTTTTAAGCGTATCTTCTaGCGAATAGATGGATTCCCAGATTCAGCTTTCAGT +
Preference number: 6 (lower is better)
Translates to: LASAALSFKRIF*RIDGFPDSAFS
Trigger: ACTGAAAGCTGAATCTGGGAATCCATCTATTCGGCAGAAGATACGCTTAAAAGATAAAGCAGCAGATGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000617909.1
CDS CAA 90 bp GGTAGGCACCTTGGCTTAGGTGTTATTTTATCTTGTTCATCAAGATaGACCTCTGCAACAGAGTCTAATGAATCAAGCAGCACAACATTA +
Preference number: 6 (lower is better)
Translates to: GRHLGLGVILSCSSR*TSATESNESSSTTL
Trigger: TAATGTTGTGCTGCTTGATTCATTAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGATAAAATAACACCTAAGCCAAGGTGCCTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS CAA 90 bp GTATCACCAGCTGCTGATGCAGCCAATATTAAAGCAGGTAAAGAATaGGGATATCTTCTCTTCAGAATCCCTTCCATTTCCTTAACTTGT +
Preference number: 6 (lower is better)
Translates to: VSPAADAANIKAGKE*GYLLFRIPSISLTC
Trigger: ACAAGTTAAGGAAATGGAAGGGATTCTGAAGAGAAGATATCCCAATTCTTTACCTGCTTTAATATTGGCTGCATCAGCAGCTGGTGATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000617909.1
CDS CAA 90 bp GTATCACCAGCTGCTGATGCAGCCAATATTAAAGCAGGTAAAGAATaGGGATATCTTCTCTTCAGAATCCCTTCCATTTCCTTAACCTAT +
Preference number: 6 (lower is better)
Translates to: VSPAADAANIKAGKE*GYLLFRIPSISLTY
Trigger: ATAGGTTAAGGAAATGGAAGGGATTCTGAAGAGAAGATATCCCAATTCTTTACCTGCTTTAATATTGGCTGCATCAGCAGCTGGTGATAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487999.1
CDS CCA 72 bp TCTTCTAATGTGTCCAATCCCACTCCGAGACTACTATaGTTGAGCTCAGAAACTACTAGTTCATTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: SSNVSNPTPRLL*LSSETTSSFVS
Trigger: AGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGGATTGGACACATTAGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS CAA 72 bp ATCAACATGTTCTTCTGTGGCAGTTACTTCAGTTACTaGTGGACAGCTGTTTTCCATACTCTCATTTGTGGT +
Preference number: 6 (lower is better)
Translates to: INMFFCGSYFSY*WTAVFHTLICG
Trigger: ACCACAAATGAGAGTATGGAAAACAGCTGTCCACAAGTAACTGAAGTAACTGCCACAGAAGAACATGTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000497936.5
ENST00000617909.1
CDS CAA 90 bp TCTTGTTCTTCTAATGTGTCCAATCCCACTCCGAGACTACTATGGTaGAGCTCAGAAACTACTAGTTCATTTGTTTCTAAGCTATCAGTA +
Preference number: 6 (lower is better)
Translates to: SCSSNVSNPTPRLLW*SSETTSSFVSKLSV
Trigger: TACTGATAGCTTAGAAACAAATGAACTAGTAGTTTCTGAGCTCAACCATAGTAGTCTCGGAGTGGGATTGGACACATTAGAAGAACAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS CAA 90 bp TCCTGTCTTAAGATTAATAATGCATTCCTCTTCTCAAGAGGAGTGTaGAATTCTCCCTCAGAAGGTTCTACACTCTTGATACAGGAATCA +
Preference number: 6 (lower is better)
Translates to: SCLKINNAFLFSRGV*NSPSEGSTLLIQES
Trigger: TGATTCCTGTATCAAGAGTGTAGAACCTTCTGAGGGAGAATTCAACACTCCTCTTGAGAAGAGGAATGCATTATTAATCTTAAGACAGGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435955.1
CDS CAA 72 bp CTTGGCTTAGGTGTTATTTTATCTTGTTCATCAAGATaGACCTCTGCAACAGAGTCTAATGAATCAAGCAGC +
Preference number: 6 (lower is better)
Translates to: LGLGVILSCSSR*TSATESNESSS
Trigger: GCTGCTTGATTCATTAGACTCTGTTGCAGAGGTCAATCTTGATGAACAAGATAAAATAACACCTAAGCCAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000497936.5
ENST00000617909.1
CDS TCA 72 bp GTATCTTCCTTGACCCTTCTCATGGAGTTTTCAAATTaGTTCATCACTGCTTCAGATTTCATCTTCAGTTCA +
Preference number: 6 (lower is better)
Translates to: VSSLTLLMEFSN*FITASDFIFSS
Trigger: TGAACTGAAGATGAAATCTGAAGCAGTGATGAATCAATTTGAAAACTCCATGAGAAGGGTCAAGGAAGATAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1
CDS CAA 72 bp AGACTCTTGTTTACTCTGCAGCTCATTAACTTGACTTaGGAAATGTCTTATAAGTACCTCTTGAGTTGCTAT +
Preference number: 6 (lower is better)
Translates to: RLLFTLQLINLT*EMSYKYLLSCY
Trigger: ATAGCAACTCAAGAGGTACTTATAAGACATTTCCAAAGTCAAGTTAATGAGCTGCAGAGTAAACAAGAGTCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000257766.8
ENST00000403245.8
ENST00000461137.5
ENST00000487999.1
ENST00000617909.1