RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP131 (Homo sapiens)

Ensembl gene IDs: ENSG00000141577

Ensembl transcript IDs: ENST00000269392.8, ENST00000374782.7, ENST00000450824.7, ENST00000570482.2, ENST00000570817.5, ENST00000571292.1, ENST00000573053.5, ENST00000575907.5

Found 803 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCTGTCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGTGGGCCTCCTGTGCTGCTCCAGCAG +
Preference number: 1 (lower is better)
Translates to: LCPLPSVLRQCSRHP*SLGTWRGPPVLLQQ
Trigger: CTGCTGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGACAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGGCGTGGGCCTCCTGTaGTGCTCCAGCAGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNGVGLL*CSSSSS
Trigger: GGAGGAGCTGCTGGAGCAGCACAGGAGGCCCACGCC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACAACCACCAGCCTCTGTaGGGGGCAGGTGGGCGTCCC +
Preference number: 2 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHNHQPL*GAGGRP
Trigger: GGGACGCCCACCTGCCCCCCACAGAGGCTGGTGGTT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
3UTR-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGACTTGGTACTTGGCGTaGGCCTCCTGTGCTGCTCCA +
Preference number: 2 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLTWYLA*ASCAAP
Trigger: TGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGT...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNASLVT*YLAWAS
Trigger: GGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAAATGCAGCCACAGGTaGTTAGCCGTGGGCATCTCA +
Preference number: 2 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISKCSHR*LAVGIS
Trigger: TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
3UTR-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAAATGCAGCCACAGGTaGTTAGCCGTGGGCATCTCA +
Preference number: 2 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQKCSHR*LAVGIS
Trigger: TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
3UTR-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCTTTACTGTTAAAATaGAGCCACAGGTGCTTAGCC +
Preference number: 2 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPLLLK*SHRCLA
Trigger: GGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
3UTR CCA 72 bp CGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCCTGTGCTGCTCCAGCA +
Preference number: 3 (lower is better)
Translates to: RSSTVFPASLVT*YLAWASCAAPA
Trigger: TGCTGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR CCA 72 bp CTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGTGGGCCTCCTGTGCTG +
Preference number: 3 (lower is better)
Translates to: LPSVLRQCSRHP*SLGTWRGPPVL
Trigger: CAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCTGGTCACTTGGTACTaGGCGTGGGCCTCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTLVTWY*AWASCA
Trigger: AGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
3UTR GCA 72 bp CAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTaGTTAGCCGTGGGCATCTCAACCACCAGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: QRPPLLLKCSHR*LAVGISTTSLC
Trigger: ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCAGGCGGGCAGCTCCTaGTCCGCGCCGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGQAGSS*SAPLHL
Trigger: CAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTCCAGCTCCGCCCGCTaGCTGGCTGCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSSSAR*LAACWP
Trigger: GGGCCAGCAGGCAGCCAGGCAGCGGGCGGAGCTGGA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCGCAGCTCCTCGGCCTaGCGCAGGCAGCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGRSSSA*RRQRCE
Trigger: CTCGCAGCGCTGCCTGCGCCAGGCCGAGGAGCTGCG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCCGGCGGGGAGGGGATaGGGAACCAGTCGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGPAGRG*GTSRAQ
Trigger: TTGGGCGCGACTGGTTCCGCATCCCCTCCCCGCCGG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGTGGGCCTCCTGTGCTCCAGCTCCGCCCGCTaGCGCTGCCGAGCACGTTCG +
Preference number: 4 (lower is better)
Translates to: DSVPGIPGHLVLGVGLLCSSSAR*RCRARS
Trigger: CGAACGTGCTCGGCAGCGGCAGCGGGCGGAGCTGGA...GCACAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCCTCCAGTGGCCCCCTaGACTTGGCGCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGPPVAP*TWRSPC
Trigger: GCAGGGGGAGCGCCAAGTCCAGGGGGCCACTGGAGG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTGGTGGTGGCGGCACTaGCAGGACGCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGWWWRH*QDAGTQ
Trigger: CTGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCGGTCTCCGGGGCCTaGAGCAGGGAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGAVSGA*SREATT
Trigger: GGTGGTGGCCTCCCTGCTGCAGGCCCCGGAGACCGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCTCGTGCTGCGCCTGTaGCTGGGCCACACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGLVLRL*LGHTLG
Trigger: ACCGAGCGTGTGGCCCAGGCACAGGCGCAGCACGAG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGCACGTTCGCGCTCCTaGTGGCCCAGCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGARSRS*WPSASF
Trigger: GAAGGAGGCGCTGGGCCAGCAGGAGCGCGAACGTGC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCCAGCTCCGCCCGCTaGCTGGCTGCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSSSAR*LAACWP
Trigger: GGGCCAGCAGGCAGCCAGGCAGCGGGCGGAGCTGGA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTGCTCGTTCACCGCCTaGGCATCCTCCAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGCSFTA*ASSSAR
Trigger: GCGGGCGCTGGAGGATGCGCAGGCGGTGAACGAGCA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCAGGTCCACACCTGCTaGGCTGCGCTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGQVHTC*AALRDA
Trigger: AGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCCGTGGTCACCTCGCTaGCCCAGGCGTATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGPWSPR*PRRICP
Trigger: GGGGCAGATACGCCTGGGCCAGCGAGGTGACCACGG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000269392.8
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCGGCGGGGAGGGGATaGGGAACCAGTCGCGCCCAA +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGPAGRG*GTSRAQ
Trigger: TTGGGCGCGACTGGTTCCGCATCCCCTCCCCGCCGG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGCGCTCCGGGACGCTaGCGATGGCCCGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGCAPGR*RWPGCL
Trigger: AAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCACACCTGCTGGGCTaGGCTCCGGGACGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGPHLLG*APGRCR
Trigger: TCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTCGCCTGGCTTGGCGTaGCTTCTCCTCCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSPGLA*LLLPGL
Trigger: AAGGCCCGGGAGGAGAAGGCACGCCAAGCCAGGCGA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGCCCACGCTCGGCAGTaGTCGCCTTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGAHARQ*SPSGLS
Trigger: TGAGAGCCCAGAAGGCGAGCACTGCCGAGCGTGGGC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGGCGCAGGCAGCGCTaGGAGGCCCGCTCATCCGAC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGWRRQR*EARSSD
Trigger: GTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCGCCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGAGCGCCCGCTCCTTCTaGCGCACAAGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSARSF*RTRPCR
Trigger: TCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCGGTCCTCGAACTCCTaGCGGATCACCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGRSSNS*RITWAR
Trigger: CCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCTGTGGTTCTGGGGATaGGTCGGAGGTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGLWFWG*VGGGQA
Trigger: TGCCTGCCCACCTCCGACTCATCCCCAGAACCACAG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTGTCCCGTAAGCGCTTaGTGCGGCTCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGCPVSA*CGSRQP
Trigger: AGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCAGGCGGGCAGCTCCTaGTCCGCGCCGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLQAGSS*SAPLHL
Trigger: CAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCCCTCGCCTGACCGCTaGCGCTGCTCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWPSPDR*RCSSRL
Trigger: CAAGCGGGAGGAGCAGCGGCAGCGGTCAGGCGAGGG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGCCGCATCACAGACGTaGTCACCTCGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGAASQT*SPRTPA
Trigger: AGCTGGGGTCCGAGGTGAGCACGTCTGTGATGCGGC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCCCGCTCATCCGACTaGAGCAGCTCCGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGARSSD*SSSASC
Trigger: GCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCACGTTCGCGCTCCTaGTGGCCCAGCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGARSRS*WPSASF
Trigger: GAAGGAGGCGCTGGGCCAGCAGGAGCGCGAACGTGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCAGGGCTCGGGTCAGTaGAGAGCTGCTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGQGSGQ*RAALLQ
Trigger: CTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCTCCTCCTCAGAGGCTaGCAGCCGGTCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGLLLRG*QPVLEL
Trigger: GAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCCTCCAGCTCCAGCTaGTGGCGGGCCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSSSSS*WRACSV
Trigger: CACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGAGGA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGTTGTGTCCGGAGGCTaGTCACGGCCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGVVSGG*SRPPPS
Trigger: GGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAAC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGAGCCGCTCCGAGGCTaGCTGACCTGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGEPLRG*LTCVVL
Trigger: CAGCACCACGCAGGTCAGCCAGCCTCGGAGCGGCTC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGGGCTCCGTTGGCCTaGGGGAGCCGCTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWWAPLA*GSRSEA
Trigger: AGCCTCGGAGCGGCTCCCCCAGGCCAACGGAGCCCA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCTGCTCGCCTGGCTTaGCGTGCCTTCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGAARLA*RAFSSR
Trigger: CCGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCCTCCAGTGGCCCCCTaGACTTGGCGCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWPPVAP*TWRSPC
Trigger: GCAGGGGGAGCGCCAAGTCCAGGGGGCCACTGGAGG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCGCAGCTCCTCGGCCTaGCGCAGGCAGCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRSSSA*RRQRCE
Trigger: CTCGCAGCGCTGCCTGCGCCAGGCCGAGGAGCTGCG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCTGTCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGTCCAGCTCCAGCTGCTaGCGGGCCTGCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: SVLCLPFFDSVPGIPGHLSSSSC*RACSVA
Trigger: GGCCACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGA...CAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGACAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGAACCACCAGCCTCTGTaGGGGGCAGGTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGNHQPL*GAGGRP
Trigger: GGGACGCCCACCTGCCCCCCACAGAGGCTGGTGGTT...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCTGGTTGGAGCTCTTaGGCGGAGGCGCCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSGWSS*AEAPSP
Trigger: CGGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGACCAGCGCTGGATGGTaGCAGTGGCCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGTSAGW*QWPGSP
Trigger: AGGTGAACCAGGCCACTGTCACCATCCAGCGCTGGT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCCAGGGCCACGGTaGATTCTTTCCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWGPGPR*ILSSAG
Trigger: GCCCGCGGAGGAAAGAATGCACCGTGGCCCTGGCCC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACAGGCGGGCAGCTCCTaGTCCGCGCCGCTGCACCTG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISQAGSS*SAPLHL
Trigger: CAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGAGCAGCTGCAGTGTGTaGAGCAGCTCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSSCSV*SSSSSG
Trigger: GCCACTGGAGGAGCTGCTGCACACACTGCAGCTGCT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCACCCACCCCTCCTaGTGGGAGTCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWGTHPS*WESSWS
Trigger: GGACCAGCTGGACTCCCAGCAGGAGGGGTGGGTGCC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTTAATCTCCAGCTCGTaGTGCGCCTGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGLISSS*CACAWA
Trigger: GGCCCAGGCACAGGCGCAGCACGAGCTGGAGATTAA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGAGCAGCTCCGCCTCGTaGAGGCTCTTGAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSSSAS*RLLSLR
Trigger: GCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCT...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCGCAGGCAGCGCTaGGAGGCCCGCTCATCCGAC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLWRRQR*EARSSD
Trigger: GTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCGCCA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCGCTGCCTGGCTGCCTaGTGGCCCAGCCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCRCLAA*WPSRSL
Trigger: GAGGGAGCGGCTGGGCCAGCAGGCAGCCAGGCAGCG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGTGGGCCTCCTGAGCTTCCGCTCCGACTaGTCCAGCTCGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: FDSVPGIPGHLVLGVGLLSFRSD*SSSESS
Trigger: CGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCT...CAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp TCTGTCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGTGCTCGTTCACCGCCTaGGCATCCTCCAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: SVLCLPFFDSVPGIPGHLCSFTA*ASSSAR
Trigger: GCGGGCGCTGGAGGATGCGCAGGCGGTGAACGAGCA...CAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGACAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp GCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGGTGGGCCTCCTGTGCTaGTCCAGCAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: AFRSSTVFPASLVTWYLAVGLLC*SSSSSR
Trigger: CCTGGAGGAGCTGCTGGAGCAGCACAGGAGGCCCAC...CGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCGTGGGCCTCCTGTaGTGCTCCAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWGVGLL*CSSSSS
Trigger: GGAGGAGCTGCTGGAGCAGCACAGGAGGCCCACGCC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCCGCGAAGCCTGCCTaGCGCGCGGGGCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISAAKPA*RAGPAD
Trigger: ATCTGCAGGCCCCGCGCGCCAGGCAGGCTTCGCGGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCAGGTCCACACCTGCTaGGCTGCGCTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWQVHTC*AALRDA
Trigger: AGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCGCGCCGCTGCACCTaGTGCCGGTACCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPRRCT*CRYQRW
Trigger: CCAGCGCTGGTACCGGCACCAGGTGCAGCGGCGCGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGATGAGTCGGAGGTaGGCAGGCAGCGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWGMSRR*AGSGLR
Trigger: CCGGAGACCGCTGCCTGCCCACCTCCGACTCATCCC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCTGCGTCCTGTCCTCTaGAGGCTGCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGLRPVL*RLLWFW
Trigger: CCAGAACCACAGCAGCCTCCAGAGGACAGGACGCAG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGAGTGCCGCTGGATGGTaGCCTCGTAGTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSAAGW*PRSAPS
Trigger: AGAGGGAGCACTACGAGGCCACCATCCAGCGGCACT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGCTGCGCCTGTGCCTaGGCCACACGCTCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGCCACA*ATRSVH
Trigger: ATGCACCGAGCGTGTGGCCCAGGCACAGGCGCAGCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCGCAGCTCCTCGGCCTaGCGCAGGCAGCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPRSSSA*RRQRCE
Trigger: CTCGCAGCGCTGCCTGCGCCAGGCCGAGGAGCTGCG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACGCAGCTCCTCGGCCTaGCGCAGGCAGCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISRSSSA*RRQRCE
Trigger: CTCGCAGCGCTGCCTGCGCCAGGCCGAGGAGCTGCG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCGGCCTCCCCAAGCTaGCCCTTCAGCTCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSASPS*PFSSEH
Trigger: GTGCTCGGAGCTGAAGGGCCAGCTTGGGGAGGCCGA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGGCCAGCTCGGCCTTaGCCTGCCGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWWPARP*PAASPP
Trigger: AGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTGGCCAGCTCGGCCTTaGCCTGCCGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSAFRSSTVFPASLVTWYWPARP*PAASPP
Trigger: AGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCA...GTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTAACCACCAGCCTCTGTaGGGGGCAGGTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PLPSVLRQCSRHPWSLGTNHQPL*GAGGRP
Trigger: GGGACGCCCACCTGCCCCCCACAGAGGCTGGTGGTT...AGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCAGCTGTCAGAGAGCTaGCGTCATCCTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGQLSES*RHPPRW
Trigger: CCAGCGAGGAGGATGACGCCAGCTCTCTGACAGCTG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
3UTR CAA 72 bp CCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTaGGTACTTGGCGTGGGCCTCCTGTGCTGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PFFDSVPGIPGH*VLGVGLLCCSS
Trigger: GCTGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR TCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGAGGGTCCCCTCGCCTaGCCGCTGCCGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTEGPLA*PLPLLL
Trigger: GAGGAGCAGCGGCAGCGGTCAGGCGAGGGGACCCTC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TCTGTCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: SVLCLPFFDSVPGIPGHLSEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...CAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGACAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGCGCTCCGGGACGCTaGCGATGGCCCGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISCAPGR*RWPGCL
Trigger: AAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGGTGGCGGCACTaGCAGGACGCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLWWWRH*QDAGTQ
Trigger: CTGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCTGCTCCGCGCCGCTaGACCTGGTGCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCPAPRR*TWCRYQ
Trigger: CTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACCCTCGCCTGACCGCTaGCGCTGCTCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISPSPDR*RCSSRL
Trigger: CAAGCGGGAGGAGCAGCGGCAGCGGTCAGGCGAGGG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCCTCGCCTGACCGCTaGCGCTGCTCCTCCCGCTTG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPSPDR*RCSSRL
Trigger: CAAGCGGGAGGAGCAGCGGCAGCGGTCAGGCGAGGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCCACGCTCGGCAGTaGTCGCCTTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWAHARQ*SPSGLS
Trigger: TGAGAGCCCAGAAGGCGAGCACTGCCGAGCGTGGGC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCGGTCTCCGGGGCCTaGAGCAGGGAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTAVSGA*SREATT
Trigger: GGTGGTGGCCTCCCTGCTGCAGGCCCCGGAGACCGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGACTTGGCGCTCCCCCTaGTCGGGGCCATCATCTCCA +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGTWRSP*SGPSSP
Trigger: TGGAGATGATGGCCCCGAGCAGGGGGAGCGCCAAGT...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGGCCCAGGCGTATCTaGCCCTGTGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGWPRRI*PCDGSW
Trigger: CCAGGACCCATCACAGGGGCAGATACGCCTGGGCCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGAGTCCAGCTGGTCCTaGCCAGACTTCTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGESSWS*PDFSIS
Trigger: CGAGATGGAGAAGTCTGGGCAGGACCAGCTGGACTC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGGCACCCACCCCTCCTaGTGGGAGTCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLGTHPS*WESSWS
Trigger: GGACCAGCTGGACTCCCAGCAGGAGGGGTGGGTGCC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGCGCCAGCGCTCTCTaGAGCAGCAGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWCASAL*SSSMAC
Trigger: GCAGGCCATGCTGCTGCTGCAGAGAGCGCTGGCGCA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGCCGTGAGGTCTCGCTaGTGCGCCAGCGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLAVRSR*CASALC
Trigger: GCAGAGAGCGCTGGCGCAGCAGCGAGACCTCACGGC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTCAATGAAGGCCAAGTaGCGCTGGATGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSMKAK*RWMVAS
Trigger: CGAGGCCACCATCCAGCGGCACTTGGCCTTCATTGA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGCCACACGCTCGGTaGATCTCTGGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGGPHAR*ISGPPA
Trigger: AGCAGGAGGACCAGAGATGCACCGAGCGTGTGGCCC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGGCGCAGGCAGCGCTaGGAGGCCCGCTCATCCGAC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISWRRQR*EARSSD
Trigger: GTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCGCCA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCCTGCTCCAGGTGCTaGTGGAACCGCTGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSCSRC*WNRCRA
Trigger: TGCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCGCTGCCTGGCTGCCTaGTGGCCCAGCCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTRCLAA*WPSRSL
Trigger: GAGGGAGCGGCTGGGCCAGCAGGCAGCCAGGCAGCG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCTGCCTGGCTGCCTaGTGGCCCAGCCGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNRCLAA*WPSRSL
Trigger: GAGGGAGCGGCTGGGCCAGCAGGCAGCCAGGCAGCG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTTCAGCTCCATCTGGTaGCGGCGCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGFSSIW*RRSCSS
Trigger: GGAGGAGCAGGAGCGCCGGCACCAGATGGAGCTGAA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGAGCGCCCGCTCCTTCTaGCGCACAAGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSARSF*RTRPCR
Trigger: TCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCTCCTCCTCAGAGGCTaGCAGCCGGTCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGLLLRG*QPVLEL
Trigger: GAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCTCCAGCTCCAGCTaGTGGCGGGCCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSSSSS*WRACSV
Trigger: CACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGAGGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCCGCGAAGCCTGCCTaGCGCGCGGGGCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTAAKPA*RAGPAD
Trigger: ATCTGCAGGCCCCGCGCGCCAGGCAGGCTTCGCGGC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTGGGCTCCGTTGGCCTaGGGGAGCCGCTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPWAPLA*GSRSEA
Trigger: AGCCTCGGAGCGGCTCCCCCAGGCCAACGGAGCCCA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGTCTGTGGGCTCCGTTaGCCTGGGGGAGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISVCGLR*PGGAAP
Trigger: CGGAGCGGCTCCCCCAGGCCAACGGAGCCCACAGAC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCACCTCCTTCCGCCTaGGCAAGCCCGTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSPPSA*ASPCCP
Trigger: GGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGCCGGTACCAGCGCTaGATGGTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGCRYQR*MVTVAW
Trigger: CCAGGCCACTGTCACCATCCAGCGCTGGTACCGGCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACCTCCAGTGGCCCCCTaGACTTGGCGCTCCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISPPVAP*TWRSPC
Trigger: GCAGGGGGAGCGCCAAGTCCAGGGGGCCACTGGAGG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCAGCAGCTCCTCCAGTaGCCCCCTGGACTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWQQLLQ*PPGLGA
Trigger: AGCGCCAAGTCCAGGGGGCCACTGGAGGAGCTGCTG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACCCTGTGATGGGTCCTaGGGCGGGGCAGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISPCDGS*GGAARP
Trigger: CGGACGTGCTGCCCCGCCCCAGGACCCATCACAGGG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGGCGTCATCCTCCGTaGTCACCTCGCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWWRHPP*SPRWPR
Trigger: CCTGGGCCAGCGAGGTGACCACGGAGGATGACGCCA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269392.8
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCAAGTGCCGCTGGATaGTGGCCTCGTAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGPSAAG*WPRSAP
Trigger: GGGAGCACTACGAGGCCACCATCCAGCGGCACTTGG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTCGGCCTCCCCAAGCTaGCCCTTCAGCTCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: PLPSVLRQCSRHPWSLGTSASPS*PFSSEH
Trigger: GTGCTCGGAGCTGAAGGGCCAGCTTGGGGAGGCCGA...AGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCCAGCTCCAGCTGCTaGCGGGCCTGCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSSSSC*RACSVA
Trigger: GGCCACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGACTTGGTACTTGGCGTaGGCCTCCTGTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGTWYLA*ASCAAP
Trigger: TGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCGCGGGCCCGCTGGTaGGTCAAGGGCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPRARW*VKGTGT
Trigger: AGTTCCAGTGCCCTTGACTCACCAGCGGGCCCGCGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTGGTTGGAGCTCTTaGGCGGAGGCGCCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSGWSS*AEAPSP
Trigger: CGGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGAGGGTCCCCTCGCCTaGCCGCTGCCGCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHEGPLA*PLPLLL
Trigger: GAGGAGCAGCGGCAGCGGTCAGGCGAGGGGACCCTC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTCTTGGTTTTCTCACTaGTCCACTTCTCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSWFSH*STSPGG
Trigger: CCCGCCGGGAGAAGTGGATCAGTGAGAAAACCAAGA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTGGTGGTGGCGGCACTaGCAGGACGCCGGGACACAG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPWWWRH*QDAGTQ
Trigger: CTGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGACGCAGTTGCCCACTaGTCCCTTGTTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGDAVAH*SLVAPV
Trigger: AACAGGAGCAACAAGGGAGCAGTGGGCAACTGCGTC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACGCCGCTGCACCTGGTaGCGGTACCAGCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISRRCTW*RYQRWM
Trigger: CATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCGCCGCTGCACCTGGTaGCGGTACCAGCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLRRCTW*RYQRWM
Trigger: CATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCTGCTCCGCGCCGCTaGACCTGGTGCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNPAPRR*TWCRYQ
Trigger: CTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCCTCTTTCTGCTGGTaGAGGTCCAAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGASFCW*RSKRVP
Trigger: GGGGACCCTCTTGGACCTGCACCAGCAGAAAGAGGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGCCCACGCTCGGCAGTaGTCGCCTTCTGGGCTCTCA +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLAHARQ*SPSGLS
Trigger: TGAGAGCCCAGAAGGCGAGCACTGCCGAGCGTGGGC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGCGGTCTCCGGGGCCTaGAGCAGGGAGGCCACCACC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGAVSGA*SREATT
Trigger: GGTGGTGGCCTCCCTGCTGCAGGCCCCGGAGACCGC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCACCCACCCCTCCTaGTGGGAGTCCAGCTGGTCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCGTHPS*WESSWS
Trigger: GGACCAGCTGGACTCCCAGCAGGAGGGGTGGGTGCC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTGCTCCCTCTGCCGCTaGAGCTGCCGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNCSLCR*SCRLSA
Trigger: GGCGCTGAGCCGGCAGCTGCAGCGGCAGAGGGAGCA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGCTCCCTCTGCCGCTaGAGCTGCCGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTCSLCR*SCRLSA
Trigger: GGCGCTGAGCCGGCAGCTGCAGCGGCAGAGGGAGCA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTGCTCCCTCTGCCGCTaGAGCTGCCGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTCSLCR*SCRLSA
Trigger: GGCGCTGAGCCGGCAGCTGCAGCGGCAGAGGGAGCA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTCGTGCTGCGCCTGTaGCTGGGCCACACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLVLRL*LGHTLG
Trigger: ACCGAGCGTGTGGCCCAGGCACAGGCGCAGCACGAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTTAATCTCCAGCTCGTaGTGCGCCTGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGLISSS*CACAWA
Trigger: GGCCCAGGCACAGGCGCAGCACGAGCTGGAGATTAA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGAGCCTCCGCACTTCCTaGTTGTGCCTTGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGSLRTS*LCLAIS
Trigger: GCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTCCAGCTCCGCCCGCTaGCTGGCTGCCTGCTGGCCC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSSSAR*LAACWP
Trigger: GGGCCAGCAGGCAGCCAGGCAGCGGGCGGAGCTGGA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGCTGCTCTCCTCCAGCTaGTGCCTCAGCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: AFRSSTVFPASLVTWYLALLSSS*CLSSSS
Trigger: GCTGGAAGAGCTGAGGCAGCAGCTGGAGGAGAGCAG...CGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp CTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGTTCAGCTCCATCTGGTaGCGGCGCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LPSVLRQCSRHPWSLGTWFSSIW*RRSCSS
Trigger: GGAGGAGCAGGAGCGCCGGCACCAGATGGAGCTGAA...CCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTTCAGCTCCATCTGGTaGCGGCGCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWFSSIW*RRSCSS
Trigger: GGAGGAGCAGGAGCGCCGGCACCAGATGGAGCTGAA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGCCGCACAAGGCCCTaGAGACGCAGATTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWCRTRP*RRRFSP
Trigger: GGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGCTCGTTCACCGCCTaGGCATCCTCCAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLCSFTA*ASSSAR
Trigger: GCGGGCGCTGGAGGATGCGCAGGCGGTGAACGAGCA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCGCTCGCTAGAAAGCTaGTCGTTCACCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGRSLES*SFTACA
Trigger: TGCGCAGGCGGTGAACGAGCAGCTTTCTAGCGAGCG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTTGTGTCCGGAGGCTaGTCACGGCCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWVVSGG*SRPPPS
Trigger: GGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAAC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGTGGGCCTCCTGTGCTaGTCCAGCAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLVGLLC*SSSSSR
Trigger: CCTGGAGGAGCTGCTGGAGCAGCACAGGAGGCCCAC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGGCGTGGGCCTCCTGTaGTGCTCCAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLGVGLL*CSSSSS
Trigger: GGAGGAGCTGCTGGAGCAGCACAGGAGGCCCACGCC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGCCGCGAAGCCTGCCTaGCGCGCGGGGCCTGCAGAT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHAAKPA*RAGPAD
Trigger: ATCTGCAGGCCCCGCGCGCCAGGCAGGCTTCGCGGC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCCGGGTGCCTTTCATaGTGGACAAGGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGPGCLS*WTRQVL
Trigger: CAGGACCTGCCTTGTCCACCATGAAAGGCACCCGGG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACAGGTCCACACCTGCTaGGCTGCGCTCCGGGACGCT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISQVHTC*AALRDA
Trigger: AGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGAGGTTGTTGATGGCCTaGGAGCCCCCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWRLLMA*EPPGPV
Trigger: CACAGGGCCTGGGGGCTCCCAGGCCATCAACAACCT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGTGAGTCAAGGGCACTaGAACTCCGGGCATTGGATG +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGVSQGH*NSGHWM
Trigger: CATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCAC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCGCGCCGCTGCACCTaGTGCCGGTACCAGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHPRRCT*CRYQRW
Trigger: CCAGCGCTGGTACCGGCACCAGGTGCAGCGGCGCGG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCTGCTCGCCTGGCTTaGCGTGCCTTCTCCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISAARLA*RAFSSR
Trigger: CCGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCAGTGCTCGCCTTCTaGGCTCTCAGGGCTCGTTTC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGAVLAF*ALRARF
Trigger: GAAACGAGCCCTGAGAGCCCAGAAGGCGAGCACTGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCAGTGCCGCCTGGTGTaGGGGACAGCTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLQCRLV*GTAPEQ
Trigger: CTGCTCAGGAGCTGTCCCCCACACCAGGCGGCACTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGATGAGTCGGAGGTaGGCAGGCAGCGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCGMSRR*AGSGLR
Trigger: CCGGAGACCGCTGCCTGCCCACCTCCGACTCATCCC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCCCCAGCTGCATCCTaGGCAAGAACGTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGSPAAS*ARTSCV
Trigger: GACGCAGGACGTTCTTGCCCAGGATGCAGCTGGGGA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGTGGCCCCCTGGACTTaGCGCTCCCCCTGCTCGGGG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHVAPWT*RSPCSG
Trigger: CCCCGAGCAGGGGGAGCGCCAAGTCCAGGGGGCCAC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCCTGTGATGGGTCCTaGGGCGGGGCAGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTPCDGS*GGAARP
Trigger: CGGACGTGCTGCCCCGCCCCAGGACCCATCACAGGG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGCTGGGAGTCCAGCTaGTCCTGCCCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGCWESS*SCPDFS
Trigger: GGAGAAGTCTGGGCAGGACCAGCTGGACTCCCAGCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGACCCACCCCTCCTGCTaGGAGTCCAGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLTHPSC*ESSWSC
Trigger: GCAGGACCAGCTGGACTCCCAGCAGGAGGGGTGGGT...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCAGCTCCTCGGCCTaGCGCAGGCAGCGCTGCGAG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHRSSSA*RRQRCE
Trigger: CTCGCAGCGCTGCCTGCGCCAGGCCGAGGAGCTGCG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCTGGCGGATCACCTaGGCCAGGTTGCTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSWRIT*ARLLRS
Trigger: CGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGGCCAGCTCGGCCTTaGCCTGCCGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISWPARP*PAASPP
Trigger: AGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTCCAGCTCCAGCTGCTaGCGGGCCTGCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSSSSC*RACSVA
Trigger: GGCCACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTAACCACCAGCCTCTGTaGGGGGCAGGTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPNHQPL*GAGGRP
Trigger: GGGACGCCCACCTGCCCCCCACAGAGGCTGGTGGTT...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCGTCATCCTCCTCGCTaGCCCAGGCGTATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRHPPR*PRRICP
Trigger: GGGGCAGATACGCCTGGGCCAGCGAGGAGGATGACG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCATTGGATGGCAAGGTaGAGCCCCGGGGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWHWMAR*SPGAGH
Trigger: ATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCGCGGGCCCGCTGGTaGGTCAAGGGCACTGGAACT +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTPRARW*VKGTGT
Trigger: AGTTCCAGTGCCCTTGACTCACCAGCGGGCCCGCGG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGACCAGCGCTGGATGGTaGCAGTGGCCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWTSAGW*QWPGSP
Trigger: AGGTGAACCAGGCCACTGTCACCATCCAGCGCTGGT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCCTCCCGCTTGGCCTaGAGCAAGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSSRLA*SKCSRR
Trigger: CCGCCTGGAGCACTTGCTTCAGGCCAAGCGGGAGGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCCTCCCGCTTGGCCTaGAGCAAGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSSRLA*SKCSRR
Trigger: CCGCCTGGAGCACTTGCTTCAGGCCAAGCGGGAGGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGTGGGGGACAGCTCCTaGGCAGGCTGCCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCVGDSS*AGCRIP
Trigger: AGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCAC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGTGGGGGACAGCTCCTaGGCAGGCTGCCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISVGDSS*AGCRIP
Trigger: AGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCAC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTCGGCCTCCAGCCGGTaGATGACCAGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSASSR*MTSSIS
Trigger: GGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp CTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTTGTCCCGTAAGCGCTTaGTGCGGCTCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: LCLPFFDSVPGIPGHLVLCPVSA*CGSRQP
Trigger: AGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACA...AAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR TCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGTCCCGTAAGCGCTTaGTGCGGCTCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLCPVSA*CGSRQP
Trigger: AGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTGCGCTCCGGGACGCTaGCGATGGCCCGGGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQCAPGR*RWPGCL
Trigger: AAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCCACACCTGCTGGGCTaGGCTCCGGGACGCTGCCGA +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGPHLLG*APGRCR
Trigger: TCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACTCAGGTCCACACCTaGTGGGCTGCGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLTQVHT*WAALRD
Trigger: GTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGT...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCGAGGCTGGCTGACCTaGGTGGTGCTGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGRGWLT*VVLLDL
Trigger: AAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGGGCCAGGGCCACGGTaGATTCTTTCCTCCGCGGGC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTGPGPR*ILSSAG
Trigger: GCCCGCGGAGGAAAGAATGCACCGTGGCCCTGGCCC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCTTCCCAAAGCCGCTaGTCTCACTGCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWASQSR*SHCPHR
Trigger: CCTGTGAGGGCAGTGAGAGCAGCGGCTTTGGGAAGC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGCCTGGGCAAGCCCGTaGTGCCCCCAGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLAWASP*CPQYCS
Trigger: GGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCGCCGCTGCACCTGGTaGCGGTACCAGCGCTGGATG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTRRCTW*RYQRWM
Trigger: CATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCCTGCTCCGCGCCGCTaGACCTGGTGCCGGTACCAG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGPAPRR*TWCRYQ
Trigger: CTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCTCTTTCTGCTGGTaGAGGTCCAAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWASFCW*RSKRVP
Trigger: GGGGACCCTCTTGGACCTGCACCAGCAGAAAGAGGC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCAGCTCCTGAATGGCTaGTCGCCTGGCTTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLQLLNG*SPGLAC
Trigger: GCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCAGGTTGTCCCCAGCTaGATCCTGGGCAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGQVVPS*ILGKNV
Trigger: GACGTTCTTGCCCAGGATGCAGCTGGGGACAACCTG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGCGCCAGCGCTCTCTaGAGCAGCAGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLCASAL*SSSMAC
Trigger: GCAGGCCATGCTGCTGCTGCAGAGAGCGCTGGCGCA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGCGCCAGCGCTCTCTaGAGCAGCAGCATGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISCASAL*SSSMAC
Trigger: GCAGGCCATGCTGCTGCTGCAGAGAGCGCTGGCGCA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGCCGTGAGGTCTCGCTaGTGCGCCAGCGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNAVRSR*CASALC
Trigger: GCAGAGAGCGCTGGCGCAGCAGCGAGACCTCACGGC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTCTGCCGCTGCAGCTaGCGGCTCAGCGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPLCRCS*RLSAFS
Trigger: AGAGAAGGCGCTGAGCCGGCAGCTGCAGCGGCAGAG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTCTGCCGCTGCAGCTaGCGGCTCAGCGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLCRCS*RLSAFS
Trigger: AGAGAAGGCGCTGAGCCGGCAGCTGCAGCGGCAGAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGCTCCCTCTGCCGCTaGAGCTGCCGGCTCAGCGCC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHCSLCR*SCRLSA
Trigger: GGCGCTGAGCCGGCAGCTGCAGCGGCAGAGGGAGCA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCAGCTCCGCCTCGTaGAGGCTCTTGAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLSSSAS*RLLSLR
Trigger: GCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCT...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCCCGCTCATCCGACTaGAGCAGCTCCGCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTARSSD*SSSASC
Trigger: GCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGGCGCAGGCAGCGCTaGGAGGCCCGCTCATCCGAC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHWRRQR*EARSSD
Trigger: GTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCGCCA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCACGTTCGCGCTCCTaGTGGCCCAGCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTARSRS*WPSASF
Trigger: GAAGGAGGCGCTGGGCCAGCAGGAGCGCGAACGTGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCACGTTCGCGCTCCTaGTGGCCCAGCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTARSRS*WPSASF
Trigger: GAAGGAGGCGCTGGGCCAGCAGGAGCGCGAACGTGC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGCTGCAGCGCCCACTaGTCCTGCTCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLCCSAH*SCSRCC
Trigger: GCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCAGGGCTCGGGTCAGTaGAGAGCTGCTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLQGSGQ*RAALLQ
Trigger: CTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAGCGCCCGCTCCTTCTaGCGCACAAGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSARSF*RTRPCR
Trigger: TCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGCTCGTTCACCGCCTaGGCATCCTCCAGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTCSFTA*ASSSAR
Trigger: GCGGGCGCTGGAGGATGCGCAGGCGGTGAACGAGCA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTCCTCCAGCTCCAGCTaGTGGCGGGCCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTSSSSS*WRACSV
Trigger: CACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGAGGA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGTTGTGTCCGGAGGCTaGTCACGGCCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLVVSGG*SRPPPS
Trigger: GGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAAC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGTGGGCCTCCTGTGCTaGTCCAGCAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLVGLLC*SSSSSR
Trigger: CCTGGAGGAGCTGCTGGAGCAGCACAGGAGGCCCAC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGGCGTGGGCCTCCTGTaGTGCTCCAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTGVGLL*CSSSSS
Trigger: GGAGGAGCTGCTGGAGCAGCACAGGAGGCCCACGCC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTCCAGCTCCGCCCGCTaGCGCTGCCGAGCACGTTCG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSSSAR*RCRARS
Trigger: CGAACGTGCTCGGCAGCGGCAGCGGGCGGAGCTGGA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000570817.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGGACGATGGGCTTGGTaGTGGCGGCACTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPGRWAW*WRHCQD
Trigger: GTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGAGACAGAGCGGACGATaGGCTTGGTGGTGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRQSGR*AWWWRH
Trigger: GTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCT...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGAGGTTGTTGATGGCCTaGGAGCCCCCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRLLMA*EPPGPV
Trigger: CACAGGGCCTGGGGGCTCCCAGGCCATCAACAACCT...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGAGCCGCTCCGAGGCTaGCTGACCTGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTEPLRG*LTCVVL
Trigger: CAGCACCACGCAGGTCAGCCAGCCTCGGAGCGGCTC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGGGCTCCGTTGGCCTaGGGGAGCCGCTCCGAGGCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHWAPLA*GSRSEA
Trigger: AGCCTCGGAGCGGCTCCCCCAGGCCAACGGAGCCCA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGTCTGTGGGCTCCGTTaGCCTGGGGGAGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGVCGLR*PGGAAP
Trigger: CGGAGCGGCTCCCCCAGGCCAACGGAGCCCACAGAC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGTCTGTGGGCTCCGTTaGCCTGGGGGAGCCGCTCCG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQVCGLR*PGGAAP
Trigger: CGGAGCGGCTCCCCCAGGCCAACGGAGCCCACAGAC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCTGTGCTCAGGCTaGCAGGCCTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWGLCSG*QASFSH
Trigger: GTGGGAAAAAGAGGCCTGCCAGCCTGAGCACAGCCC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTGGCTCCCTTCTCGCTaGGGGCTGTGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCWLPSR*GLCSGW
Trigger: CCAGCCTGAGCACAGCCCCCAGCGAGAAGGGAGCCA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCAGGACGTTCCAGGTaGCTCCCTTCTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCPGRSR*LPSRWG
Trigger: CCCCCAGCGAGAAGGGAGCCACCTGGAACGTCCTGG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTCACCTCCTTCCGCCTaGGCAAGCCCGTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSPPSA*ASPCCP
Trigger: GGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGAGGCTGCCGCATTCCTaGCACTCTGGTCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRLPHS*HSGLPG
Trigger: CCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCT...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCAGTGCCGCCTGGTGTaGGGGACAGCTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPQCRLV*GTAPEQ
Trigger: CTGCTCAGGAGCTGTCCCCCACACCAGGCGGCACTG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGGGATGAGTCGGAGGTaGGCAGGCAGCGGTCTCCGG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNGMSRR*AGSGLR
Trigger: CCGGAGACCGCTGCCTGCCCACCTCCGACTCATCCC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCAGCAGCTCCTCCAGTaGCCCCCTGGACTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLQQLLQ*PPGLGA
Trigger: AGCGCCAAGTCCAGGGGGCCACTGGAGGAGCTGCTG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCCTGTGATGGGTCCTaGGGCGGGGCAGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQPCDGS*GGAARP
Trigger: CGGACGTGCTGCCCCGCCCCAGGACCCATCACAGGG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGAGTGCCGCTGGATGGTaGCCTCGTAGTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSAAGW*PRSAPS
Trigger: AGAGGGAGCACTACGAGGCCACCATCCAGCGGCACT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATCGGCCTCCCCAAGCTaGCCCTTCAGCTCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSASPS*PFSSEH
Trigger: GTGCTCGGAGCTGAAGGGCCAGCTTGGGGAGGCCGA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCCTGGCGGATCACCTaGGCCAGGTTGCTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSWRIT*ARLLRS
Trigger: CGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCCTGGCGGATCACCTaGGCCAGGTTGCTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSWRIT*ARLLRS
Trigger: CGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTCCAGCTCCAGCTGCTaGCGGGCCTGCAGCGTGGCC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSSSSC*RACSVA
Trigger: GGCCACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAGCAGCTCCTCCAGGTaGTCGGCCCGCTTCACCGCA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSSSSR*SARFTA
Trigger: TGCGGTGAAGCGGGCCGACCACCTGGAGGAGCTGCT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGGTCACTTGGTACTTaGCGTGGGCCTCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGWSLGT*RGPPVL
Trigger: CAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAACCACCAGCCTCTGTaGGGGGCAGGTGGGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTNHQPL*GAGGRP
Trigger: GGGACGCCCACCTGCCCCCCACAGAGGCTGGTGGTT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCAGCTGTCAGAGAGCTaGCGTCATCCTCCTCGCTGG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWQLSES*RHPPRW
Trigger: CCAGCGAGGAGGATGACGCCAGCTCTCTGACAGCTG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACACATGCGCTCCTTCCTaGTGCGGCCGGCCTCCCACG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNTCAPS*CGRPPT
Trigger: CGTGGGAGGCCGGCCGCACCAGGAAGGAGCGCATGT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000573053.5
CDS-3UTR TCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCAGTATTGTTGGCCTTaGGGGCCTGGTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLQYCWP*GPGGQC
Trigger: GCACTGCCCACCAGGCCCTCAAGGCCAACAATACTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTTCTGGGGATaGGTCGGAGGTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPLWFWG*VGGGQA
Trigger: TGCCTGCCCACCTCCGACTCATCCCCAGAACCACAG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCTCGTGCAGGCTCTTaGGCCTCCGCACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPRAGS*ASALPA
Trigger: AGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCCTCGTGCAGGCTCTTaGGCCTCCGCACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLPRAGS*ASALPA
Trigger: AGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCGGCCTCCAGCCGGTaGATGACCAGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSASSR*MTSSIS
Trigger: GGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGTCCCGTAAGCGCTTaGTGCGGCTCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLCPVSA*CGSRQP
Trigger: AGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCACTCAGGTCCACACCTaGTGGGCTGCGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTTQVHT*WAALRD
Trigger: GTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAGCCGCTGCTCTCACTaGCCTCACAGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSRCSH*PHRWLP
Trigger: AGGCAGCCACCTGTGAGGGCAGTGAGAGCAGCGGCT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCCTGGGCAAGCCCGTaGTGCCCCCAGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPAWASP*CPQYCS
Trigger: GGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTCGCCTGGCTTGGCGTaGCTTCTCCTCCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSPGLA*LLLPGL
Trigger: AAGGCCCGGGAGGAGAAGGCACGCCAAGCCAGGCGA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCTGTCCTCTGGAGGCTaGTGTGGTTCTGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWLSSGG*CGSGDE
Trigger: CTCATCCCCAGAACCACAGCAGCCTCCAGAGGACAG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTTGGCGCTCCCCCTaGTCGGGGCCATCATCTCCA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISTWRSP*SGPSSP
Trigger: TGGAGATGATGGCCCCGAGCAGGGGGAGCGCCAAGT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGGCCCAGGCGTATCTaGCCCTGTGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLWPRRI*PCDGSW
Trigger: CCAGGACCCATCACAGGGGCAGATACGCCTGGGCCA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGAGCAGCAGCATGGCCTaGTTCTTCTCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSSSMA*FFSSTS
Trigger: GGAGGTGGAGGAGAAGAAGCAGGCCATGCTGCTGCT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGCCGTGAGGTCTCGCTaGTGCGCCAGCGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHAVRSR*CASALC
Trigger: GCAGAGAGCGCTGGCGCAGCAGCGAGACCTCACGGC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGGGCCACACGCTCGGTaGATCTCTGGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLGPHAR*ISGPPA
Trigger: AGCAGGAGGACCAGAGATGCACCGAGCGTGTGGCCC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGGGCCACACGCTCGGTaGATCTCTGGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPGPHAR*ISGPPA
Trigger: AGCAGGAGGACCAGAGATGCACCGAGCGTGTGGCCC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCTCGTGCTGCGCCTGTaGCTGGGCCACACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQLVLRL*LGHTLG
Trigger: ACCGAGCGTGTGGCCCAGGCACAGGCGCAGCACGAG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTCGTGCTGCGCCTGTaGCTGGGCCACACGCTCGGT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLVLRL*LGHTLG
Trigger: ACCGAGCGTGTGGCCCAGGCACAGGCGCAGCACGAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTAATCTCCAGCTCGTaGTGCGCCTGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLLISSS*CACAWA
Trigger: GGCCCAGGCACAGGCGCAGCACGAGCTGGAGATTAA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGCACGTTCGCGCTCCTaGTGGCCCAGCGCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGARSRS*WPSASF
Trigger: GAAGGAGGCGCTGGGCCAGCAGGAGCGCGAACGTGC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCCTGCTCCAGGTGCTaGTGGAACCGCTGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSCSRC*WNRCRA
Trigger: TGCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCTGCTCTCCTCCAGCTaGTGCCTCAGCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLLLSSS*CLSSSS
Trigger: GCTGGAAGAGCTGAGGCAGCAGCTGGAGGAGAGCAG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTCAGTGCAGAGCTaGTCTCCTCCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCGSVQS*SPPAAA
Trigger: GGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGGGTCAGTGCAGAGCTaGTCTCCTCCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISGSVQS*SPPAAA
Trigger: GGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGGGTCAGTGCAGAGCTaGTCTCCTCCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPGSVQS*SPPAAA
Trigger: GGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGGGTCAGTGCAGAGCTaGTCTCCTCCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLGSVQS*SPPAAA
Trigger: GGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCAGGGCTCGGGTCAGTaGAGAGCTGCTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCQGSGQ*RAALLQ
Trigger: CTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCAGGGCTCGGGTCAGTaGAGAGCTGCTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLQGSGQ*RAALLQ
Trigger: CTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAGCTTCCGCTCCGACTaGTCCAGCTCGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSFRSD*SSSESS
Trigger: CGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACTCCTCCTCAGAGGCTaGCAGCCGGTCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISLLLRG*QPVLEL
Trigger: GAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTCCTCCTCAGAGGCTaGCAGCCGGTCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLLLRG*QPVLEL
Trigger: GAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTCCTCCAGCTCCAGCTaGTGGCGGGCCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSSSSS*WRACSV
Trigger: CACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGAGGA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTCCTCCAGCTCCAGCTaGTGGCGGGCCTGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSSSSS*WRACSV
Trigger: CACGCTGCAGGCCCGCCAGCAGCTGGAGCTGGAGGA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGTTGTGTCCGGAGGCTaGTCACGGCCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPVVSGG*SRPPPS
Trigger: GGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAAC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGTGGGCCTCCTGTGCTaGTCCAGCAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTVGLLC*SSSSSR
Trigger: CCTGGAGGAGCTGCTGGAGCAGCACAGGAGGCCCAC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGGCGTGGGCCTCCTGTaGTGCTCCAGCAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQGVGLL*CSSSSS
Trigger: GGAGGAGCTGCTGGAGCAGCACAGGAGGCCCACGCC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGACAGAGCGGACGATaGGCTTGGTGGTGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLRQSGR*AWWWRH
Trigger: GTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCT...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGAGCCGCTCCGAGGCTaGCTGACCTGCGTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHEPLRG*LTCVVL
Trigger: CAGCACCACGCAGGTCAGCCAGCCTCGGAGCGGCTC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGCATCAGGAAGTCTGTaGGCTCCGTTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCASGSL*APLAWG
Trigger: CCCCCAGGCCAACGGAGCCCACAGACTTCCTGATGC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTGGCTCCCTTCTCGCTaGGGGCTGTGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTWLPSR*GLCSGW
Trigger: CCAGCCTGAGCACAGCCCCCAGCGAGAAGGGAGCCA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCCAGGACGTTCCAGGTaGCTCCCTTCTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTPGRSR*LPSRWG
Trigger: CCCCCAGCGAGAAGGGAGCCACCTGGAACGTCCTGG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTACTCCGGGCATTGGATaGCAAGGTGAAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCTPGIG*QGEAPG
Trigger: CCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGT...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTCCGGGCTGAGTGGGTaGCACTGGAGACATTCTTCG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSGLSG*HWRHSS
Trigger: CGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTTGTTCCGGGCTGAGTaGGTGGCACTGGAGACATTC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGLFRAE*VALETF
Trigger: GAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTCACCTCCTTCCGCCTaGGCAAGCCCGTGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSPPSA*ASPCCP
Trigger: GGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTGCCGGTACCAGCGCTaGATGGTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCCRYQR*MVTVAW
Trigger: CCAGGCCACTGTCACCATCCAGCGCTGGTACCGGCA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGCTGCTCCTCCCGCTTaGCCTGAAGCAAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLAAPPA*PEASAP
Trigger: TGGAGCACTTGCTTCAGGCCAAGCGGGAGGAGCAGC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACCCGGGCCTTCCTCCTaGCTGCCTCTTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISPGPSS*LPLSAG
Trigger: ACCAGCAGAAAGAGGCAGCCAGGAGGAAGGCCCGGG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCCCGGGCCTTCCTCCTaGCTGCCTCTTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLPGPSS*LPLSAG
Trigger: ACCAGCAGAAAGAGGCAGCCAGGAGGAAGGCCCGGG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCATTCCTGGCACTCTaGTCTCCCTGGGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGAFLAL*SPWDSQ
Trigger: CTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCCCAGCTGCATCCTaGGCAAGAACGTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSPAAS*ARTSCV
Trigger: GACGCAGGACGTTCTTGCCCAGGATGCAGCTGGGGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGCAGCTCCTCCAGTaGCCCCCTGGACTTGGCGCT +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNQQLLQ*PPGLGA
Trigger: AGCGCCAAGTCCAGGGGGCCACTGGAGGAGCTGCTG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACACCCACCCCTCCTGCTaGGAGTCCAGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNTHPSC*ESSWSC
Trigger: GCAGGACCAGCTGGACTCCCAGCAGGAGGGGTGGGT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCAAGTGCCGCTGGATaGTGGCCTCGTAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPSAAG*WPRSAP
Trigger: GGGAGCACTACGAGGCCACCATCCAGCGGCACTTGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCGCTCGGTGCATCTCTaGTCCTCCTGCTTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRSVHL*SSCFSS
Trigger: CGAGCTGAAGCAGGAGGACCAGAGATGCACCGAGCG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTGCTGCGCCTGTGCCTaGGCCACACGCTCGGTGCAT +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTCCACA*ATRSVH
Trigger: ATGCACCGAGCGTGTGGCCCAGGCACAGGCGCAGCA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGTATTCAGCTCCATCTaGTGCCGGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLVFSSI*CRRSCS
Trigger: GGAGCAGGAGCGCCGGCACCAGATGGAGCTGAATAC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTTCTCACTCTCCTCCTTaGCCAGCGCCATGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LCLPFFDSVPGIPGHLVLSHSPP*PAPCRP
Trigger: AGGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGA...AAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTCGGCCTCCCCAAGCTaGCCCTTCAGCTCCGAGCAC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSASPS*PFSSEH
Trigger: GTGCTCGGAGCTGAAGGGCCAGCTTGGGGAGGCCGA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGGCCAGCTCGGCCTTaGCCTGCCGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHWPARP*PAASPP
Trigger: AGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTGGCCAGCTCGGCCTTaGCCTGCCGCGTCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGWPARP*PAASPP
Trigger: AGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGCAGCTCCTCCAGGTaGTCGGCCCGCTTCACCGCA +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSSSSR*SARFTA
Trigger: TGCGGTGAAGCGGGCCGACCACCTGGAGGAGCTGCT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGGTCACTTGGTACTTaGCGTGGGCCTCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWWSLGT*RGPPVL
Trigger: CAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGT +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGCSRHP*SLGTWR
Trigger: ACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCGTCATCCTCCTCGCTaGCCCAGGCGTATCTGCCCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTRHPPR*PRRICP
Trigger: GGGGCAGATACGCCTGGGCCAGCGAGGAGGATGACG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCAGCCACGCCTCCTaGGGGGACATGCGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTSSHAS*GDMRSF
Trigger: GAAGGAGCGCATGTCCCCCCAGGAGGCGTGGCTGCT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000573053.5
CDS-3UTR TCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGTGCACCATGGTGGTaGCGCAGTTGCCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLCAPWW*RSCPLL
Trigger: GAGCAGTGGGCAACTGCGTCACCACCATGGTGCACA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTCTGGTTGGAGCTCTTaGGCGGAGGCGCCCTCTCCG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSGWSS*AEAPSP
Trigger: CGGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGCGCTGGATGGTaGCAGTGGCCTGGTTCACCT +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISTSAGW*QWPGSP
Trigger: AGGTGAACCAGGCCACTGTCACCATCCAGCGCTGGT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTCCTCCCGCTTGGCCTaGAGCAAGTGCTCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSSRLA*SKCSRR
Trigger: CCGCCTGGAGCACTTGCTTCAGGCCAAGCGGGAGGA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGTGGGGGACAGCTCCTaGGCAGGCTGCCGCATTCCT +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQVGDSS*AGCRIP
Trigger: AGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCAC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACAGTATTGTTGGCCTTaGGGGCCTGGTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISQYCWP*GPGGQC
Trigger: GCACTGCCCACCAGGCCCTCAAGGCCAACAATACTG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCCTCGTGCAGGCTCTTaGGCCTCCGCACTTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTPRAGS*ASALPA
Trigger: AGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp TCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: SSAFRSSTVFPASLVTWYPPAGE*PAQSPC
Trigger: ACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGG...GTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR TCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTGTCCCGTAAGCGCTTaGTGCGGCTCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTCPVSA*CGSRQP
Trigger: AGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSEHRS*SFRSDC
Trigger: GCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGCCGATGGCCCGGGTaGCTTTCATGGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISCRWPG*LSWWTR
Trigger: CCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTGCCGATGGCCCGGGTaGCTTTCATGGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLCRWPG*LSWWTR
Trigger: CCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTGCCGATGGCCCGGGTaGCTTTCATGGTGGACAAGG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCCRWPG*LSWWTR
Trigger: CCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACACTCAGGTCCACACCTaGTGGGCTGCGCTCCGGGAC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHTQVHT*WAALRD
Trigger: GTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTTTTCCCACTGGGGCTaGCCTCGAAGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWFSHWG*PRRASG
Trigger: TCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCGCTGCTCTCACTaGCCTCACAGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTSRCSH*PHRWLP
Trigger: AGGCAGCCACCTGTGAGGGCAGTGAGAGCAGCGGCT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCTTCCCAAAGCCGCTaGTCTCACTGCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPASQSR*SHCPHR
Trigger: CCTGTGAGGGCAGTGAGAGCAGCGGCTTTGGGAAGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCTTCCCAAAGCCGCTaGTCTCACTGCCCTCACAGG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISASQSR*SHCPHR
Trigger: CCTGTGAGGGCAGTGAGAGCAGCGGCTTTGGGAAGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCCTGGGCAAGCCCGTaGTGCCCCCAGTATTGTTCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTAWASP*CPQYCS
Trigger: GGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTCGCCTGGCTTGGCGTaGCTTCTCCTCCCGGGCCTT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSPGLA*LLLPGL
Trigger: AAGGCCCGGGAGGAGAAGGCACGCCAAGCCAGGCGA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCAGCTCCTGAATGGCTaGTCGCCTGGCTTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTQLLNG*SPGLAC
Trigger: GCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTCTGCCGCTGCAGCTaGCGGCTCAGCGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHLCRCS*RLSAFS
Trigger: AGAGAAGGCGCTGAGCCGGCAGCTGCAGCGGCAGAG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCTCTGCCGCTGCAGCTaGCGGCTCAGCGCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQLCRCS*RLSAFS
Trigger: AGAGAAGGCGCTGAGCCGGCAGCTGCAGCGGCAGAG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCAATGAAGGCCAAGTaGCGCTGGATGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLSMKAK*RWMVAS
Trigger: CGAGGCCACCATCCAGCGGCACTTGGCCTTCATTGA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGGGCCACACGCTCGGTaGATCTCTGGTCCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNGPHAR*ISGPPA
Trigger: AGCAGGAGGACCAGAGATGCACCGAGCGTGTGGCCC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGTTCCTGCTTGTGCCTTaGAATCAGCTTCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGFLLVP*NQLLDL
Trigger: GAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAA...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGCAGCTCCGCCTCGTaGAGGCTCTTGAGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSSSAS*RLLSLR
Trigger: GCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGCTGCAGCGCCCACTaGTCCTGCTCCAGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHCCSAH*SCSRCC
Trigger: GCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCTGCTCTCCTCCAGCTaGTGCCTCAGCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLLSSS*CLSSSS
Trigger: GCTGGAAGAGCTGAGGCAGCAGCTGGAGGAGAGCAG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACTGCTCTCCTCCAGCTaGTGCCTCAGCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISLLSSS*CLSSSS
Trigger: GCTGGAAGAGCTGAGGCAGCAGCTGGAGGAGAGCAG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTTCAGCTCCATCTGGTaGCGGCGCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTFSSIW*RRSCSS
Trigger: GGAGGAGCAGGAGCGCCGGCACCAGATGGAGCTGAA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTTCAGCTCCATCTGGTaGCGGCGCTCCTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNFSSIW*RRSCSS
Trigger: GGAGGAGCAGGAGCGCCGGCACCAGATGGAGCTGAA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCTCTCCAGCTCCAGCTaGTGCTTCAGGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWLSSSS*CFRVFS
Trigger: GCTGAATACCCTGAAGCAGCAGCTGGAGCTGGAGAG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CTCTGTCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTCTCTCCAGCTCCAGCTaGTGCTTCAGGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: LCPLPSVLRQCSRHPWSLLSSSS*CFRVFS
Trigger: GCTGAATACCCTGAAGCAGCAGCTGGAGCTGGAGAG...AAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGACAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCTTCCGCTCCGACTaGTCCAGCTCGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTSFRSD*SSSESS
Trigger: CGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACAGCTTCCGCTCCGACTaGTCCAGCTCGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSFRSD*SSSESS
Trigger: CGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGCCGCACAAGGCCCTaGAGACGCAGATTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTCRTRP*RRRFSP
Trigger: GGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGCGCCCGCTCCTTCTaGCGCACAAGGCCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSARSF*RTRPCR
Trigger: TCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCGCTCGCTAGAAAGCTaGTCGTTCACCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLRSLES*SFTACA
Trigger: TGCGCAGGCGGTGAACGAGCAGCTTTCTAGCGAGCG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACGCTCGCTAGAAAGCTaGTCGTTCACCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISRSLES*SFTACA
Trigger: TGCGCAGGCGGTGAACGAGCAGCTTTCTAGCGAGCG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGTTGTGTCCGGAGGCTaGTCACGGCCTCCTCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNVVSGG*SRPPPS
Trigger: GGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAAC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGTGGGCCTCCTGTGCTaGTCCAGCAGCTCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGVGLLC*SSSSSR
Trigger: CCTGGAGGAGCTGCTGGAGCAGCACAGGAGGCCCAC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGGACGATGGGCTTGGTaGTGGCGGCACTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQGRWAW*WRHCQD
Trigger: GTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGGACGATGGGCTTGGTaGTGGCGGCACTGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHGRWAW*WRHCQD
Trigger: GTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACAGGTTGTTGATGGCCTaGGAGCCCCCAGGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNRLLMA*EPPGPV
Trigger: CACAGGGCCTGGGGGCTCCCAGGCCATCAACAACCT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGGGCTGTGCTCAGGCTaGCAGGCCTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPGLCSG*QASFSH
Trigger: GTGGGAAAAAGAGGCCTGCCAGCCTGAGCACAGCCC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTGGCTCCCTTCTCGCTaGGGGCTGTGCTCAGGCTGG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQWLPSR*GLCSGW
Trigger: CCAGCCTGAGCACAGCCCCCAGCGAGAAGGGAGCCA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCCAGGACGTTCCAGGTaGCTCCCTTCTCGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGPGRSR*LPSRWG
Trigger: CCCCCAGCGAGAAGGGAGCCACCTGGAACGTCCTGG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCACTCCGGGCATTGGATaGCAAGGTGAAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTTPGIG*QGEAPG
Trigger: CCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTGCCGGTACCAGCGCTaGATGGTGACAGTGGCCTGG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNCRYQR*MVTVAW
Trigger: CCAGGCCACTGTCACCATCCAGCGCTGGTACCGGCA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCGGGCCTTCCTCCTaGCTGCCTCTTTCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNPGPSS*LPLSAG
Trigger: ACCAGCAGAAAGAGGCAGCCAGGAGGAAGGCCCGGG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGAATGGCTGCTCGCCTaGCTTGGCGTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCEWLLA*LGVPSP
Trigger: AGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGTTGCAGCTCCTGAATaGCTGCTCGCCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISVAAPE*LLAWLG
Trigger: GCCAAGCCAGGCGAGCAGCCATTCAGGAGCTGCAAC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCTGGGATTCTCAGGTaGCCCACGCTCGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTPGILR*PTLGSA
Trigger: AGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCACTCTGGTCTCCCTaGGATTCTCAGGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPALWSP*DSQVAH
Trigger: GTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGGCTGCCGCATTCCTaGCACTCTGGTCTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTRLPHS*HSGLPG
Trigger: CCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTGCCGCCTGGTGTaGGGGACAGCTCCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHQCRLV*GTAPEQ
Trigger: CTGCTCAGGAGCTGTCCCCCACACCAGGCGGCACTG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACTGCGTCCTGTCCTCTaGAGGCTGCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISLRPVL*RLLWFW
Trigger: CCAGAACCACAGCAGCCTCCAGAGGACAGGACGCAG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCCCCAGCTGCATCCTaGGCAAGAACGTCCTGCGTC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSPAAS*ARTSCV
Trigger: GACGCAGGACGTTCTTGCCCAGGATGCAGCTGGGGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTGCTGGGAGTCCAGCTaGTCCTGCCCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCCWESS*SCPDFS
Trigger: GGAGAAGTCTGGGCAGGACCAGCTGGACTCCCAGCA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACACCCACCCCTCCTGCTaGGAGTCCAGCTGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHTHPSC*ESSWSC
Trigger: GCAGGACCAGCTGGACTCCCAGCAGGAGGGGTGGGT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTAGTGCCGCTGGATGGTaGCCTCGTAGTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSAAGW*PRSAPS
Trigger: AGAGGGAGCACTACGAGGCCACCATCCAGCGGCACT...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCCAAGTGCCGCTGGATaGTGGCCTCGTAGTGCTCCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTPSAAG*WPRSAP
Trigger: GGGAGCACTACGAGGCCACCATCCAGCGGCACTTGG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACGCTCGGTGCATCTCTaGTCCTCCTGCTTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISRSVHL*SSCFSS
Trigger: CGAGCTGAAGCAGGAGGACCAGAGATGCACCGAGCG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGTATTCAGCTCCATCTaGTGCCGGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPVFSSI*CRRSCS
Trigger: GGAGCAGGAGCGCCGGCACCAGATGGAGCTGAATAC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCTCACTCTCCTCCTTaGCCAGCGCCATGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSHSPP*PAPCRP
Trigger: AGGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCTCACTCTCCTCCTTaGCCAGCGCCATGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSHSPP*PAPCRP
Trigger: AGGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTCCTGGCGGATCACCTaGGCCAGGTTGCTGCGCTCG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSWRIT*ARLLRS
Trigger: CGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGGTCCTCGAACTCCTaGCGGATCACCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHRSSNS*RITWAR
Trigger: CCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCGGTCCTCGAACTCCTaGCGGATCACCTGGGCCAGG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQRSSNS*RITWAR
Trigger: CCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGAGCAGCTCCTCCAGGTaGTCGGCCCGCTTCACCGCA +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSSSSR*SARFTA
Trigger: TGCGGTGAAGCGGGCCGACCACCTGGAGGAGCTGCT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTCACTTGGTACTTaGCGTGGGCCTCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLWSLGT*RGPPVL
Trigger: CAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCA...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCASLVT*YLAWAS
Trigger: GGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPASLVT*YLAWAS
Trigger: GGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLASLVT*YLAWAS
Trigger: GGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISASLVT*YLAWAS
Trigger: GGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGT +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWCSRHP*SLGTWR
Trigger: ACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCATTGGATGGCAAGGTaGAGCCCCGGGGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTHWMAR*SPGAGH
Trigger: ATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGTGCACCATGGTGGTaGCGCAGTTGCCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTCAPWW*RSCPLL
Trigger: GAGCAGTGGGCAACTGCGTCACCACCATGGTGCACA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTGTGCACCATGGTGGTaGCGCAGTTGCCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNCAPWW*RSCPLL
Trigger: GAGCAGTGGGCAACTGCGTCACCACCATGGTGCACA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGTATTGTTCCGGGCTaGGTGGGTGGCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLSIVPG*VGGTGD
Trigger: GTCTCCAGTGCCACCCACTCAGCCCGGAACAATACT...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTAGTATTGTTCCGGGCTaGGTGGGTGGCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSIVPG*VGGTGD
Trigger: GTCTCCAGTGCCACCCACTCAGCCCGGAACAATACT...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTGTGGTTCTGGGGATaGGTCGGAGGTGGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLWFWG*VGGGQA
Trigger: TGCCTGCCCACCTCCGACTCATCCCCAGAACCACAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLPPAGE*PAQSPC
Trigger: ACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTCGGCCTCCAGCCGGTaGATGACCAGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSASSR*MTSSIS
Trigger: GGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTCGGCCTCCAGCCGGTaGATGACCAGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSASSR*MTSSIS
Trigger: GGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCACCTTCCTCTTCTaGTCGCTGCCTGTGACCACG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLSTFLF*SLPVTT
Trigger: CGTGGTCACAGGCAGCGAGCAGAAGAGGAAGGTGCT...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCGAGGCTGGCTGACCTaGGTGGTGCTGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCRGWLT*VVLLDL
Trigger: AAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCGAGGCTGGCTGACCTaGGTGGTGCTGTTGGATCTT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLRGWLT*VVLLDL
Trigger: AAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACAGCCGCTGCTCTCACTaGCCTCACAGGTGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSRCSH*PHRWLP
Trigger: AGGCAGCCACCTGTGAGGGCAGTGAGAGCAGCGGCT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTGGGCAAGCCCGTGCTaGCCCCAGTATTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQWASPC*PQYCSG
Trigger: CCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTGGGCAAGCCCGTGCTaGCCCCAGTATTGTTCCGGG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGWASPC*PQYCSG
Trigger: CCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCTCCTGAATGGCTaGTCGCCTGGCTTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHQLLNG*SPGLAC
Trigger: GCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTGTCCTCTGGAGGCTaGTGTGGTTCTGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLSSGG*CGSGDE
Trigger: CTCATCCCCAGAACCACAGCAGCCTCCAGAGGACAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACAGGTTGTCCCCAGCTaGATCCTGGGCAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISQVVPS*ILGKNV
Trigger: GACGTTCTTGCCCAGGATGCAGCTGGGGACAACCTG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGACTTGGCGCTCCCCCTaGTCGGGGCCATCATCTCCA +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQTWRSP*SGPSSP
Trigger: TGGAGATGATGGCCCCGAGCAGGGGGAGCGCCAAGT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCAGCTGCAGTGTGTaGAGCAGCTCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTSSCSV*SSSSSG
Trigger: GCCACTGGAGGAGCTGCTGCACACACTGCAGCTGCT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTCCTTCTCCAGCAGCTaGAGTGTGTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLSFSSS*SVCSSS
Trigger: GGAGCTGCTGCACACACTGCAGCTGCTGGAGAAGGA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGGCCCAGGCGTATCTaGCCCTGTGATGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHWPRRI*PCDGSW
Trigger: CCAGGACCCATCACAGGGGCAGATACGCCTGGGCCA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGAGTCCAGCTGGTCCTaGCCAGACTTCTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCESSWS*PDFSIS
Trigger: CGAGATGGAGAAGTCTGGGCAGGACCAGCTGGACTC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGCCGCATCACAGACGTaGTCACCTCGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQAASQT*SPRTPA
Trigger: AGCTGGGGTCCGAGGTGAGCACGTCTGTGATGCGGC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTAGCAGCAGCATGGCCTaGTTCTTCTCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSSSMA*FFSSTS
Trigger: GGAGGTGGAGGAGAAGAAGCAGGCCATGCTGCTGCT...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCAATGAAGGCCAAGTaGCGCTGGATGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSMKAK*RWMVAS
Trigger: CGAGGCCACCATCCAGCGGCACTTGGCCTTCATTGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTCAATGAAGGCCAAGTaGCGCTGGATGGTGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLSMKAK*RWMVAS
Trigger: CGAGGCCACCATCCAGCGGCACTTGGCCTTCATTGA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTCCTGCTCCAGGTGCTaGTGGAACCGCTGCCGAGCA +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSCSRC*WNRCRA
Trigger: TGCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGGGTCAGTGCAGAGCTaGTCTCCTCCAGCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGGSVQS*SPPAAA
Trigger: GGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGGCTCGGGTCAGTaGAGAGCTGCTCTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHQGSGQ*RAALLQ
Trigger: CTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGAGCTTCCGCTCCGACTaGTCCAGCTCGGAGAGCTCG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSFRSD*SSSESS
Trigger: CGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTGCCGCACAAGGCCCTaGAGACGCAGATTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQCRTRP*RRRFSP
Trigger: GGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTGCCGCACAAGGCCCTaGAGACGCAGATTCTCGCCC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGCRTRP*RRRFSP
Trigger: GGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCTCGCTAGAAAGCTaGTCGTTCACCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNRSLES*SFTACA
Trigger: TGCGCAGGCGGTGAACGAGCAGCTTTCTAGCGAGCG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTCCTCCTCAGAGGCTaGCAGCCGGTCCTCGAACTC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLLLRG*QPVLEL
Trigger: GAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCGCTTCACCGCAGCCTaGAGCACACCCACAGGGTCA +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQRFTAA*STPTGS
Trigger: TGACCCTGTGGGTGTGCTGCAGGCTGCGGTGAAGCG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGAGACAGAGCGGACGATaGGCTTGGTGGTGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGRQSGR*AWWWRH
Trigger: GTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGCATCAGGAAGTCTGTaGGCTCCGTTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGASGSL*APLAWG
Trigger: CCCCCAGGCCAACGGAGCCCACAGACTTCCTGATGC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGCATCAGGAAGTCTGTaGGCTCCGTTGGCCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQASGSL*APLAWG
Trigger: CCCCCAGGCCAACGGAGCCCACAGACTTCCTGATGC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCCTCTTTTTCCCACTaGGGCTGCCCTCGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPASFSH*GCPRRA
Trigger: TGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGTGAAGCCCCGGGGCTaGTCATCCAGGACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGVKPRG*SSRTFQ
Trigger: CTGGAACGTCCTGGATGACCAGCCCCGGGGCTTCAC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGTGAAGCCCCGGGGCTaGTCATCCAGGACGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHVKPRG*SSRTFQ
Trigger: CTGGAACGTCCTGGATGACCAGCCCCGGGGCTTCAC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACACTCCGGGCATTGGATaGCAAGGTGAAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHTPGIG*QGEAPG
Trigger: CCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGTGAGTCAAGGGCACTaGAACTCCGGGCATTGGATG +
Preference number: 4 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLVSQGH*NSGHWM
Trigger: CATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCAC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGGAGGGGGCAGTCTaGTTGGAGCTCTTGAGCGGA +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTREGAV*LELLSG
Trigger: TCCGCTCAAGAGCTCCAACCAGACTGCCCCCTCCCT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTCCGGGCTGAGTGGGTaGCACTGGAGACATTCTTCG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLSGLSG*HWRHSS
Trigger: CGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGATGGTGACAGTGGCCTaGTTCACCTGGTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGMVTVA*FTWWIN
Trigger: GTTTATCCACCAGGTGAACCAGGCCACTGTCACCAT...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCTGCCTCTTTCTGCTaGTGCAGGTCCAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPAASFC*CRSKRV
Trigger: GACCCTCTTGGACCTGCACCAGCAGAAAGAGGCAGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGAATGGCTGCTCGCCTaGCTTGGCGTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNEWLLA*LGVPSP
Trigger: AGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCAGTGCTCGCCTTCTaGGCTCTCAGGGCTCGTTTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTAVLAF*ALRARF
Trigger: GAAACGAGCCCTGAGAGCCCAGAAGGCGAGCACTGC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCTGGGATTCTCAGGTaGCCCACGCTCGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHPGILR*PTLGSA
Trigger: AGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGCACTCTGGTCTCCCTaGGATTCTCAGGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNALWSP*DSQVAH
Trigger: GTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCTGCGTCCTGTCCTCTaGAGGCTGCTGTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTLRPVL*RLLWFW
Trigger: CCAGAACCACAGCAGCCTCCAGAGGACAGGACGCAG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCAGCTGTCAGAGAGCTaGCGTCATCCTCCGTGGTCA +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPQLSES*RHPPWS
Trigger: TGACCACGGAGGATGACGCCAGCTCTCTGACAGCTG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000269392.8
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTGCTGGGAGTCCAGCTaGTCCTGCCCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNCWESS*SCPDFS
Trigger: GGAGAAGTCTGGGCAGGACCAGCTGGACTCCCAGCA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGTATTCAGCTCCATCTaGTGCCGGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTVFSSI*CRRSCS
Trigger: GGAGCAGGAGCGCCGGCACCAGATGGAGCTGAATAC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTTGGTACTTGGCGTaGGCCTCCTGTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISTWYLA*ASCAAP
Trigger: TGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGGTCACTTGGTACTTaGCGTGGGCCTCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISWSLGT*RGPPVL
Trigger: CAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATTGGATGGCAAGGTaGAGCCCCGGGGCTGGTCAT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGHWMAR*SPGAGH
Trigger: ATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCAGTATTGTTGGCCTTaGGGGCCTGGTGGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGQYCWP*GPGGQC
Trigger: GCACTGCCCACCAGGCCCTCAAGGCCAACAATACTG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGTTCGGGGAACGCACTaGGTTTTCCAAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGVRGTH*VFQISP
Trigger: TGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAAC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCAATCAGCTGGTCAATaGAGGCCAAGTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCQSAGQ*RPSAAG
Trigger: TCCAGCGGCACTTGGCCTTCATTGACCAGCTGATTG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACAATCAGCTGGTCAATaGAGGCCAAGTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISQSAGQ*RPSAAG
Trigger: TCCAGCGGCACTTGGCCTTCATTGACCAGCTGATTG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCTTGGTTTTCTCACTaGTCCACTTCTCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSWFSH*STSPGG
Trigger: CCCGCCGGGAGAAGTGGATCAGTGAGAAAACCAAGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATCTTGGTTTTCTCACTaGTCCACTTCTCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSWFSH*STSPGG
Trigger: CCCGCCGGGAGAAGTGGATCAGTGAGAAAACCAAGA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCPPAGE*PAQSPC
Trigger: ACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLPPAGE*PAQSPC
Trigger: ACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTCGGCCTCCAGCCGGTaGATGACCAGCTCAATCTCC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSASSR*MTSSIS
Trigger: GGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGCACCTTCCTCTTCTaGTCGCTGCCTGTGACCACG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSTFLF*SLPVTT
Trigger: CGTGGTCACAGGCAGCGAGCAGAAGAGGAAGGTGCT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATTTTCCCACTGGGGCTaGCCTCGAAGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISFSHWG*PRRASG
Trigger: TCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGCCTCTTTCTGCTGGTaGAGGTCCAAGAGGGTCCCC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHASFCW*RSKRVP
Trigger: GGGGACCCTCTTGGACCTGCACCAGCAGAAAGAGGC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCTGTCCTCTGGAGGCTaGTGTGGTTCTGGGGATGAG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTLSSGG*CGSGDE
Trigger: CTCATCCCCAGAACCACAGCAGCCTCCAGAGGACAG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGCAGCTGCAGTGTGTaGAGCAGCTCCTCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSSCSV*SSSSSG
Trigger: GCCACTGGAGGAGCTGCTGCACACACTGCAGCTGCT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTCCTTCTCCAGCAGCTaGAGTGTGTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSFSSS*SVCSSS
Trigger: GGAGCTGCTGCACACACTGCAGCTGCTGGAGAAGGA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTCCTTCTCCAGCAGCTaGAGTGTGTGCAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTSFSSS*SVCSSS
Trigger: GGAGCTGCTGCACACACTGCAGCTGCTGGAGAAGGA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGAGTCCAGCTGGTCCTaGCCAGACTTCTCCATCTCG +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTESSWS*PDFSIS
Trigger: CGAGATGGAGAAGTCTGGGCAGGACCAGCTGGACTC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGCAGCAGCATGGCCTaGTTCTTCTCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSSSMA*FFSSTS
Trigger: GGAGGTGGAGGAGAAGAAGCAGGCCATGCTGCTGCT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAGCCTCCGCACTTCCTaGTTGTGCCTTGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISSLRTS*LCLAIS
Trigger: GCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTAGCCTCCGCACTTCCTaGTTGTGCCTTGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSLRTS*LCLAIS
Trigger: GCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCT...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTCTCCAGCTCCAGCTaGTGCTTCAGGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPLSSSS*CFRVFS
Trigger: GCTGAATACCCTGAAGCAGCAGCTGGAGCTGGAGAG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTCTCCAGCTCCAGCTaGTGCTTCAGGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLSSSS*CFRVFS
Trigger: GCTGAATACCCTGAAGCAGCAGCTGGAGCTGGAGAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCGCTCGCTAGAAAGCTaGTCGTTCACCGCCTGCGCA +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQRSLES*SFTACA
Trigger: TGCGCAGGCGGTGAACGAGCAGCTTTCTAGCGAGCG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGTGGGCCTCCTGCCTTTACTGTTAAAATaGAGCCACAGGTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: FDSVPGIPGHLVLGVGLLPLLLK*SHRCLA
Trigger: GGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG...CAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCCCGGGTGCCTTTCATaGTGGACAAGGCAGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGPGCLS*WTRQVL
Trigger: CAGGACCTGCCTTGTCCACCATGAAAGGCACCCGGG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCCTCTTTTTCCCACTaGGGCTGCCCTCGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTASFSH*GCPRRA
Trigger: TGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGGGCTGTGCTCAGGCTaGCAGGCCTCTTTTTCCCAC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGGLCSG*QASFSH
Trigger: GTGGGAAAAAGAGGCCTGCCAGCCTGAGCACAGCCC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCTGAGTGGGTGGCACTaGAGACATTCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLSGWH*RHSSAA
Trigger: AGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTTGTTCCGGGCTGAGTaGGTGGCACTGGAGACATTC +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLFRAE*VALETF
Trigger: GAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCCTGGTTCACCTGGTaGATAAACCTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISAWFTW*INLSAS
Trigger: GGAGGCTGAGAGGTTTATCCACCAGGTGAACCAGGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGCCTGGTTCACCTGGTaGATAAACCTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPAWFTW*INLSAS
Trigger: GGAGGCTGAGAGGTTTATCCACCAGGTGAACCAGGC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCTGCCTCTTTCTGCTaGTGCAGGTCCAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTAASFC*CRSKRV
Trigger: GACCCTCTTGGACCTGCACCAGCAGAAAGAGGCAGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCTGCCTCTTTCTGCTaGTGCAGGTCCAAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTAASFC*CRSKRV
Trigger: GACCCTCTTGGACCTGCACCAGCAGAAAGAGGCAGC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGAATGGCTGCTCGCCTaGCTTGGCGTGCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHEWLLA*LGVPSP
Trigger: AGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGTTGCAGCTCCTGAATaGCTGCTCGCCTGGCTTGGC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGVAAPE*LLAWLG
Trigger: GCCAAGCCAGGCGAGCAGCCATTCAGGAGCTGCAAC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGCACTCTGGTCTCCCTaGGATTCTCAGGTGGCCCAC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQALWSP*DSQVAH
Trigger: GTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGCATTCCTGGCACTCTaGTCTCCCTGGGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCAFLAL*SPWDSQ
Trigger: CTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGTGCCGCTGGATGGTaGCCTCGTAGTGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSAAGW*PRSAPS
Trigger: AGAGGGAGCACTACGAGGCCACCATCCAGCGGCACT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCGCTCGGTGCATCTCTaGTCCTCCTGCTTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQRSVHL*SSCFSS
Trigger: CGAGCTGAAGCAGGAGGACCAGAGATGCACCGAGCG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCTCGGTGCATCTCTaGTCCTCCTGCTTCAGCTCG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHRSVHL*SSCFSS
Trigger: CGAGCTGAAGCAGGAGGACCAGAGATGCACCGAGCG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGTATTCAGCTCCATCTaGTGCCGGCGCTCCTGCTCC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQVFSSI*CRRSCS
Trigger: GGAGCAGGAGCGCCGGCACCAGATGGAGCTGAATAC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTCTCACTCTCCTCCTTaGCCAGCGCCATGTCGGCCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSHSPP*PAPCRP
Trigger: AGGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCACTTGGTACTTGGCGTaGGCCTCCTGTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTTWYLA*ASCAAP
Trigger: TGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTTGGTACTTGGCGTaGGCCTCCTGTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTTWYLA*ASCAAP
Trigger: TGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGGTCACTTGGTACTTaGCGTGGGCCTCCTGTGCTG +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTWSLGT*RGPPVL
Trigger: CAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGCATCCCTGGTCACTTaGTACTTGGCGTGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHASLVT*YLAWAS
Trigger: GGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACAGTATTGTTCCGGGCTaGGTGGGTGGCACTGGAGAC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSIVPG*VGGTGD
Trigger: GTCTCCAGTGCCACCCACTCAGCCCGGAACAATACT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCAATCAGCTGGTCAATaGAGGCCAAGTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTQSAGQ*RPSAAG
Trigger: TCCAGCGGCACTTGGCCTTCATTGACCAGCTGATTG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR TCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGT +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTPPAGE*PAQSPC
Trigger: ACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACAGCACCTTCCTCTTCTaGTCGCTGCCTGTGACCACG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHSTFLF*SLPVTT
Trigger: CGTGGTCACAGGCAGCGAGCAGAAGAGGAAGGTGCT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGCCCTCACAGGTGGCTaGCTTGATGATGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLALTGG*LDDVVE
Trigger: CTCAACAACATCATCAAGGCAGCCACCTGTGAGGGC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCCCTCACAGGTGGCTaGCTTGATGATGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISALTGG*LDDVVE
Trigger: CTCAACAACATCATCAAGGCAGCCACCTGTGAGGGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCTGGCTGCCTCTTTCTaGTGGTGCAGGTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQLAASF*WCRSKR
Trigger: CCTCTTGGACCTGCACCAGCAGAAAGAGGCAGCCAG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTGGCTGCCTCTTTCTaGTGGTGCAGGTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLAASF*WCRSKR
Trigger: CCTCTTGGACCTGCACCAGCAGAAAGAGGCAGCCAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGGCTGCCTCTTTCTaGTGGTGCAGGTCCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHLAASF*WCRSKR
Trigger: CCTCTTGGACCTGCACCAGCAGAAAGAGGCAGCCAG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGTTGTCCCCAGCTaGATCCTGGGCAAGAACGTC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHQVVPS*ILGKNV
Trigger: GACGTTCTTGCCCAGGATGCAGCTGGGGACAACCTG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGCAGCAGCATGGCCTaGTTCTTCTCCTCCACCTCC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSSSMA*FFSSTS
Trigger: GGAGGTGGAGGAGAAGAAGCAGGCCATGCTGCTGCT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTTCCTGCTTGTGCCTTaGAATCAGCTTCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWFLLVP*NQLLDL
Trigger: GAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCTCTCCAGCTCCAGCTaGTGCTTCAGGGTATTCAGC +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTLSSSS*CFRVFS
Trigger: GCTGAATACCCTGAAGCAGCAGCTGGAGCTGGAGAG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCTTTACTGTTAAAATaGAGCCACAGGTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGPLLLK*SHRCLA
Trigger: GGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGCCTCTTTTTCCCACTaGGGCTGCCCTCGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQASFSH*GCPRRA
Trigger: TGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCTGAGTGGGTGGCACTaGAGACATTCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTLSGWH*RHSSAA
Trigger: AGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTCCGGGCTGAGTGGGTaGCACTGGAGACATTCTTCG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSGLSG*HWRHSS
Trigger: CGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTTGTCCTCAATCAGCTaGTCAATGAAGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWLSSIS*SMKAKC
Trigger: GCACTTGGCCTTCATTGACCAGCTGATTGAGGACAA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCTTGCAATCAGCTTCTaGATCTCGGGCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLAISF*ISGSRP
Trigger: AGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGACTTGGTACTTGGCGTaGGCCTCCTGTGCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGTWYLA*ASCAAP
Trigger: TGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGT +
Preference number: 4 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTCSRHP*SLGTWR
Trigger: ACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAATCAGCTGGTCAATaGAGGCCAAGTGCCGCTGGA +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHQSAGQ*RPSAAG
Trigger: TCCAGCGGCACTTGGCCTTCATTGACCAGCTGATTG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTTTTCCCACTGGGGCTaGCCTCGAAGAGCATCAGGA +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHFSHWG*PRRASG
Trigger: TCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGACGCAGTTGCCCACTaGTCCCTTGTTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHDAVAH*SLVAPV
Trigger: AACAGGAGCAACAAGGGAGCAGTGGGCAACTGCGTC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGACGCAGTTGCCCACTaGTCCCTTGTTGCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGDAVAH*SLVAPV
Trigger: AACAGGAGCAACAAGGGAGCAGTGGGCAACTGCGTC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGCCCTCACAGGTGGCTaGCTTGATGATGTTGTTGAG +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNALTGG*LDDVVE
Trigger: CTCAACAACATCATCAAGGCAGCCACCTGTGAGGGC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGCCTCCGCACTTCCTaGTTGTGCCTTGCAATCAGC +
Preference number: 4 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSLRTS*LCLAIS
Trigger: GCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACAAATGCAGCCACAGGTaGTTAGCCGTGGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNKCSHR*LAVGIS
Trigger: TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTGAGTGGGTGGCACTaGAGACATTCTTCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLSGWH*RHSSAA
Trigger: AGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGCCTGGTTCACCTGGTaGATAAACCTCTCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHAWFTW*INLSAS
Trigger: GGAGGCTGAGAGGTTTATCCACCAGGTGAACCAGGC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTATGGTGACAGTGGCCTaGTTCACCTGGTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCMVTVA*FTWWIN
Trigger: GTTTATCCACCAGGTGAACCAGGCCACTGTCACCAT...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGCATTCCTGGCACTCTaGTCTCCCTGGGATTCTCAG +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGAFLAL*SPWDSQ
Trigger: CTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHCSRHP*SLGTWR
Trigger: ACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTGTTCCCGGCATCCCTaGTCACTTGGTACTTGGCGT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGCSRHP*SLGTWR
Trigger: ACGCCAAGTACCAAGTGACCAGGGATGCCGGGAACA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR TCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGTTCGGGGAACGCACTaGGTTTTCCAAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCVRGTH*VFQISP
Trigger: TGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAAC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR TCA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGTTCGGGGAACGCACTaGGTTTTCCAAATTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPVRGTH*VFQISP
Trigger: TGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAAC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR GCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACAAATGCAGCCACAGGTaGTTAGCCGTGGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHKCSHR*LAVGIS
Trigger: TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGAAATGCAGCCACAGGTaGTTAGCCGTGGGCATCTCA +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGKCSHR*LAVGIS
Trigger: TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTTGCAATCAGCTTCTaGATCTCGGGCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHLAISF*ISGSRP
Trigger: AGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTTGCAATCAGCTTCTaGATCTCGGGCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLAISF*ISGSRP
Trigger: AGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTTCCTGCTTGTGCCTTaGAATCAGCTTCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNFLLVP*NQLLDL
Trigger: GAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCTTTACTGTTAAAATaGAGCCACAGGTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCPLLLK*SHRCLA
Trigger: GGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR GCA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCACCTTTACTGTTAAAATaGAGCCACAGGTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISPLLLK*SHRCLA
Trigger: GGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACATGGTGACAGTGGCCTaGTTCACCTGGTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHMVTVA*FTWWIN
Trigger: GTTTATCCACCAGGTGAACCAGGCCACTGTCACCAT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CCA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTTGTCCTCAATCAGCTaGTCAATGAAGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNLSSIS*SMKAKC
Trigger: GCACTTGGCCTTCATTGACCAGCTGATTGAGGACAA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTTGTCCTCAATCAGCTaGTCAATGAAGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTLSSIS*SMKAKC
Trigger: GCACTTGGCCTTCATTGACCAGCTGATTGAGGACAA...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTTCCTGCTTGTGCCTTaGAATCAGCTTCTGGATCTC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGFLLVP*NQLLDL
Trigger: GAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CCA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTTGTCCTCAATCAGCTaGTCAATGAAGGCCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHLSSIS*SMKAKC
Trigger: GCACTTGGCCTTCATTGACCAGCTGATTGAGGACAA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR GCA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCCTTTACTGTTAAAATaGAGCCACAGGTGCTTAGCC +
Preference number: 4 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGPLLLK*SHRCLA
Trigger: GGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS GCA 90 bp CCACACCTGCTGGGCTGCGCTCCGGGACGCTGCCGATGGCCCGGGTaGCTTTCATGGTGGACAAGGCAGGTCCTGCGCGGGCCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: PHLLGCAPGRCRWPG*LSWWTRQVLRGPGA
Trigger: CGCCCCCGGCCCGCGCAGGACCTGCCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp CCAGCTCCAGCTGCTGGCGGGCCTGCAGCGTGGCCAGCTCGGCCTTaGCCTGCCGCGTCTCCTCCTCAGAGGCTGCCAGCCGGTCCTCGA +
Preference number: 5 (lower is better)
Translates to: PAPAAGGPAAWPARP*PAASPPQRLPAGPR
Trigger: TCGAGGACCGGCTGGCAGCCTCTGAGGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCACGCTGCAGGCCCGCCAGCAGCTGGAGCTGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp TCCTCGGCCTGGCGCAGGCAGCGCTGCGAGGCCCGCTCATCCGACTaGAGCAGCTCCGCCTCGTGCAGGCTCTTGAGCCTCCGCACTTCC +
Preference number: 5 (lower is better)
Translates to: SSAWRRQRCEARSSD*SSSASCRLLSLRTS
Trigger: GGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCGCCAGGCCGAGGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS TCA 90 bp CCCTCGGCCTCCCCAAGCTGGCCCTTCAGCTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGCTCCAGCTCGGAGAGCTCGGCCTCG +
Preference number: 5 (lower is better)
Translates to: PSASPSWPFSSEHRS*SFRSDCSSSESSAS
Trigger: CGAGGCCGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGAGCTGAAGGGCCAGCTTGGGGAGGCCGAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp CCGGGACACAGGCGGAGGGAGACCTGTCAGACTCAGGTCCACACCTaGTGGGCTGCGCTCCGGGACGCTGCCGATGGCCCGGGTGCCTTT +
Preference number: 5 (lower is better)
Translates to: PGHRRRETCQTQVHT*WAALRDAADGPGAF
Trigger: AAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAGGTCTCCCTCCGCCTGTGTCCCGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp CTCCTCCCGCTTGGCCTGAAGCAAGTGCTCCAGGCGGGCAGCTCCTaGTCCGCGCCGCTGCACCTGGTGCCGGTACCAGCGCTGGATGGT +
Preference number: 5 (lower is better)
Translates to: LLPLGLKQVLQAGSS*SAPLHLVPVPALDG
Trigger: ACCATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTGGAGCACTTGCTTCAGGCCAAGCGGGAGGAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 90 bp AGCTGGCGTCATCCTCCGTGGTCACCTCGCTGGCCCAGGCGTATCTaGCCCTGTGATGGGTCCTGGGGCGGGGCAGCACGTCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SWRHPPWSPRWPRRI*PCDGSWGGAARPAP
Trigger: AGGAGCCGGACGTGCTGCCCCGCCCCAGGACCCATCACAGGGGCAGATACGCCTGGGCCAGCGAGGTGACCACGGAGGATGACGCCAGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269392.8
ENST00000575907.5
CDS GCA 90 bp GCCTGCGCATCCTCCAGCGCCCGCTCCTTCTGCCGCACAAGGCCCTaGAGACGCAGATTCTCGCCCTCGGCCTCCCCAAGCTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ACASSSARSFCRTRP*RRRFSPSASPSWPF
Trigger: GAAGGGCCAGCTTGGGGAGGCCGAGGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCTGGAGGATGCGCAGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS CCA 90 bp GACTCAGGTCCACACCTGCTGGGCTGCGCTCCGGGACGCTGCCGATaGCCCGGGTGCCTTTCATGGTGGACAAGGCAGGTCCTGCGCGGG +
Preference number: 5 (lower is better)
Translates to: DSGPHLLGCAPGRCR*PGCLSWWTRQVLRG
Trigger: CCCGCGCAGGACCTGCCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp CAGGCGGAGGGAGACCTGTCAGACTCAGGTCCACACCTGCTGGGCTaGGCTCCGGGACGCTGCCGATGGCCCGGGTGCCTTTCATGGTGG +
Preference number: 5 (lower is better)
Translates to: QAEGDLSDSGPHLLG*APGRCRWPGCLSWW
Trigger: CCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAGGTCTCCCTCCGCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp AGCTGCTCGTTCACCGCCTGCGCATCCTCCAGCGCCCGCTCCTTCTaGCGCACAAGGCCCTGCAGACGCAGATTCTCGCCCTCGGCCTCC +
Preference number: 5 (lower is better)
Translates to: SCSFTACASSSARSF*RTRPCRRRFSPSAS
Trigger: GGAGGCCGAGGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCTGGAGGATGCGCAGGCGGTGAACGAGCAGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp TCAGCCCTCAGGGCTCGGGTCAGTGCAGAGCTGCTCTCCTCCAGCTaGTGCCTCAGCTCTTCCAGCTCCGCCCGCTGCCGCTGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: SALRARVSAELLSSS*CLSSSSSARCRCRA
Trigger: TGCTCGGCAGCGGCAGCGGGCGGAGCTGGAAGAGCTGAGGCAGCAGCTGGAGGAGAGCAGCTCTGCACTGACCCGAGCCCTGAGGGCTGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374782.7
ENST00000570817.5
ENST00000575907.5
CDS CCA 90 bp CGTGCCTTCTCCTCCCGGGCCTTCCTCCTGGCTGCCTCTTTCTGCTaGTGCAGGTCCAAGAGGGTCCCCTCGCCTGACCGCTGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: RAFSSRAFLLAASFC*CRSKRVPSPDRCRC
Trigger: GCAGCGGCAGCGGTCAGGCGAGGGGACCCTCTTGGACCTGCACCAGCAGAAAGAGGCAGCCAGGAGGAAGGCCCGGGAGGAGAAGGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp GCCGCCTGGTGTGGGGGACAGCTCCTGAGCAGGCTGCCGCATTCCTaGCACTCTGGTCTCCCTGGGATTCTCAGGTGGCCCACGCTCGGC +
Preference number: 5 (lower is better)
Translates to: AAWCGGQLLSRLPHS*HSGLPGILRWPTLG
Trigger: GCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCACACCAGGCGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp GCCACCTCACTGTACAGCCGCTGCCGTTGCTGCTGCAGCGCCCACTaGTCCTGCTCCAGGTGCTGCTGGAACCGCTGCCGAGCACGTTCG +
Preference number: 5 (lower is better)
Translates to: ATSLYSRCRCCCSAH*SCSRCCWNRCRARS
Trigger: CGAACGTGCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGTACAGTGAGGTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS CCA 90 bp GGACACAGGCGGAGGGAGACCTGTCAGACTCAGGTCCACACCTGCTaGGCTGCGCTCCGGGACGCTGCCGATGGCCCGGGTGCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: GHRRRETCQTQVHTC*AALRDAADGPGAFH
Trigger: ATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAGGTCTCCCTCCGCCTGTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp CTGTCAGACTCAGGTCCACACCTGCTGGGCTGCGCTCCGGGACGCTaGCGATGGCCCGGGTGCCTTTCATGGTGGACAAGGCAGGTCCTG +
Preference number: 5 (lower is better)
Translates to: LSDSGPHLLGCAPGR*RWPGCLSWWTRQVL
Trigger: CAGGACCTGCCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp GTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGTGGGCCTCCTGTaGTGCTCCAGCAGCTCCTCCAGGTGGTCGGCCCGCTTCACCGCA +
Preference number: 5 (lower is better)
Translates to: VPGIPGHLVLGVGLL*CSSSSSRWSARFTA
Trigger: TGCGGTGAAGCGGGCCGACCACCTGGAGGAGCTGCTGGAGCAGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCCGGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
ENST00000575907.5
CDS CCA 90 bp AGGCTGCCGCATTCCTGGCACTCTGGTCTCCCTGGGATTCTCAGGTaGCCCACGCTCGGCAGTGCTCGCCTTCTGGGCTCTCAGGGCTCG +
Preference number: 5 (lower is better)
Translates to: RLPHSWHSGLPGILR*PTLGSARLLGSQGS
Trigger: CGAGCCCTGAGAGCCCAGAAGGCGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp GTGTGGGGGACAGCTCCTGAGCAGGCTGCCGCATTCCTGGCACTCTaGTCTCCCTGGGATTCTCAGGTGGCCCACGCTCGGCAGTGCTCG +
Preference number: 5 (lower is better)
Translates to: VWGTAPEQAAAFLAL*SPWDSQVAHARQCS
Trigger: CGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp CCCGGCCCCGCCTCCGGCACCCACCCCTCCTGCTGGGAGTCCAGCTaGTCCTGCCCAGACTTCTCCATCTCGTCCAAGAAGCTCATGATG +
Preference number: 5 (lower is better)
Translates to: PGPASGTHPSCWESS*SCPDFSISSKKLMM
Trigger: CATCATGAGCTTCTTGGACGAGATGGAGAAGTCTGGGCAGGACCAGCTGGACTCCCAGCAGGAGGGGTGGGTGCCGGAGGCGGGGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp TGCCGCGTCTCCTCCTCAGAGGCTGCCAGCCGGTCCTCGAACTCCTaGCGGATCACCTGGGCCAGGTTGCTGCGCTCGCTAGAAAGCTGC +
Preference number: 5 (lower is better)
Translates to: CRVSSSEAASRSSNS*RITWARLLRSLESC
Trigger: GCAGCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAGACGCGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS TCA 90 bp GGGGGCCAGGGCCACGGTGCATTCTTTCCTCCGCGGGCCCGCTGGTaGGTCAAGGGCACTGGAACTCCGGGCATTGGATGGCAAGGTGAA +
Preference number: 5 (lower is better)
Translates to: GGQGHGAFFPPRARW*VKGTGTPGIGWQGE
Trigger: TTCACCTTGCCATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCACCAGCGGGCCCGCGGAGGAAAGAATGCACCGTGGCCCTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 90 bp CAGCCTCCTCCTCCGTCACCTCCTTCCGCCTGGGCAAGCCCGTGCTaGCCCCAGTATTGTTCCGGGCTGAGTGGGTGGCACTGGAGACAT +
Preference number: 5 (lower is better)
Translates to: QPPPPSPPSAWASPC*PQYCSGLSGWHWRH
Trigger: ATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGACGGAGGAGGAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 90 bp CAGCGCTGCGAGGCCCGCTCATCCGACTGCAGCAGCTCCGCCTCGTaGAGGCTCTTGAGCCTCCGCACTTCCTGCTTGTGCCTTGCAATC +
Preference number: 5 (lower is better)
Translates to: QRCEARSSDCSSSAS*RLLSLRTSCLCLAI
Trigger: GATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCTCGCAGCGCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp AGCAGGGCTGGCCACAGGGACTCACCTCATGTTGTGTCCGGAGGCTaGTCACGGCCTCCTCCTTCCTCGCGAGGGCTGTCTTCACCCTCC +
Preference number: 5 (lower is better)
Translates to: SRAGHRDSPHVVSGG*SRPPPSSRGLSSPS
Trigger: GGAGGGTGAAGACAGCCCTCGCGAGGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAACATGAGGTGAGTCCCTGTGGCCAGCCCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS CCA 90 bp ACAGCTCCTGAGCAGGCTGCCGCATTCCTGGCACTCTGGTCTCCCTaGGATTCTCAGGTGGCCCACGCTCGGCAGTGCTCGCCTTCTGGG +
Preference number: 5 (lower is better)
Translates to: TAPEQAAAFLALWSP*DSQVAHARQCSPSG
Trigger: CCCAGAAGGCGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTCAGGAGCTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp TCCTCAGAGGCTGCCAGCCGGTCCTCGAACTCCTGGCGGATCACCTaGGCCAGGTTGCTGCGCTCGCTAGAAAGCTGCTCGTTCACCGCC +
Preference number: 5 (lower is better)
Translates to: SSEAASRSSNSWRIT*ARLLRSLESCSFTA
Trigger: GGCGGTGAACGAGCAGCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCGGCTGGCAGCCTCTGAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGTACAGCCGCTGCCGTaGCTGCTGCAGCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGVQPLP*LLQRPL
Trigger: CAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGTAC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS GCA 90 bp TGCGCCTGTGCCTGGGCCACACGCTCGGTGCATCTCTGGTCCTCCTaGTTCAGCTCGGCCACCACAGCCTCGCACTTTTCACTCAGGACC +
Preference number: 5 (lower is better)
Translates to: CACAWATRSVHLWSS*FSSATTASHFSLRT
Trigger: GGTCCTGAGTGAAAAGTGCGAGGCTGTGGTGGCCGAGCTGAAGCAGGAGGACCAGAGATGCACCGAGCGTGTGGCCCAGGCACAGGCGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS CCA 90 bp CGCCTGGGCAAGCCCGTGCTGCCCCCAGTATTGTTCCGGGCTGAGTaGGTGGCACTGGAGACATTCTTCGGCAGCTTCCCAAAGCCGCTG +
Preference number: 5 (lower is better)
Translates to: RLGKPVLPPVLFRAE*VALETFFGSFPKPL
Trigger: CAGCGGCTTTGGGAAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 90 bp GCAGCTCCTGCTCCGCGCCGCTGCACCTGGTGCCGGTACCAGCGCTaGATGGTGACAGTGGCCTGGTTCACCTGGTGGATAAACCTCTCA +
Preference number: 5 (lower is better)
Translates to: AAPAPRRCTWCRYQR*MVTVAWFTWWINLS
Trigger: TGAGAGGTTTATCCACCAGGTGAACCAGGCCACTGTCACCATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGGAGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 90 bp AGCTCGTGCTGCGCCTGTGCCTGGGCCACACGCTCGGTGCATCTCTaGTCCTCCTGCTTCAGCTCGGCCACCACAGCCTCGCACTTTTCA +
Preference number: 5 (lower is better)
Translates to: SSCCACAWATRSVHL*SSCFSSATTASHFS
Trigger: TGAAAAGTGCGAGGCTGTGGTGGCCGAGCTGAAGCAGGAGGACCAGAGATGCACCGAGCGTGTGGCCCAGGCACAGGCGCAGCACGAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS TCA 90 bp CTGGTGAGTCAAGGGCACTGGAACTCCGGGCATTGGATGGCAAGGTaGAGCCCCGGGGCTGGTCATCCAGGACGTTCCAGGTGGCTCCCT +
Preference number: 5 (lower is better)
Translates to: LVSQGHWNSGHWMAR*SPGAGHPGRSRWLP
Trigger: AGGGAGCCACCTGGAACGTCCTGGATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS TCA 90 bp CTTCCGCCTGGGCAAGCCCGTGCTGCCCCCAGTATTGTTCCGGGCTaGGTGGGTGGCACTGGAGACATTCTTCGGCAGCTTCCCAAAGCC +
Preference number: 5 (lower is better)
Translates to: LPPGQARAAPSIVPG*VGGTGDILRQLPKA
Trigger: GGCTTTGGGAAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 90 bp GCACTCTGGTCTCCCTGGGATTCTCAGGTGGCCCACGCTCGGCAGTaGTCGCCTTCTGGGCTCTCAGGGCTCGTTTCTGTTGCAGCTCCT +
Preference number: 5 (lower is better)
Translates to: ALWSPWDSQVAHARQ*SPSGLSGLVSVAAP
Trigger: AGGAGCTGCAACAGAAACGAGCCCTGAGAGCCCAGAAGGCGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp TCTCGCTGGGGGCTGTGCTCAGGCTGGCAGGCCTCTTTTTCCCACTaGGGCTGCCCTCGAAGAGCATCAGGAAGTCTGTGGGCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: SRWGLCSGWQASFSH*GCPRRASGSLWAPL
Trigger: CAACGGAGCCCACAGACTTCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGCCTGCCAGCCTGAGCACAGCCCCCAGCGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGAGCGGACGATGGGCTaGGTGGTGGCGGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGERTMG*VVAALP
Trigger: TGGCAGTGCCGCCACCACCAAGCCCATCGTCCGCTC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGAGTCTGTGGGCTCCGTaGGCCTGGGGGAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSLWAP*AWGSRS
Trigger: GGAGCGGCTCCCCCAGGCCAACGGAGCCCACAGACT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCCTTCTCTGTCTCCTaGACCCGCCGGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGAFSVS*TRRAVR
Trigger: CCTCACGGCCCGGCGGGTCAAGGAGACAGAGAAGGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGGCATCCCTGGTCACTaGGTACTTGGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGGIPGH*VLGVGL
Trigger: GAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
63% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS TCA 90 bp AGGCCCGCTCATCCGACTGCAGCAGCTCCGCCTCGTGCAGGCTCTTaGGCCTCCGCACTTCCTGCTTGTGCCTTGCAATCAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RPAHPTAAAPPRAGS*ASALPACALQSASG
Trigger: TCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp TCGTTTCTGTTGCAGCTCCTGAATGGCTGCTCGCCTGGCTTGGCGTaGCTTCTCCTCCCGGGCCTTCCTCCTGGCTGCCTCTTTCTGCTG +
Preference number: 5 (lower is better)
Translates to: SFLLQLLNGCSPGLA*LLLPGLPPGCLFLL
Trigger: CAGCAGAAAGAGGCAGCCAGGAGGAAGGCCCGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTGCAACAGAAACGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 90 bp AGCCCGTGCTGCCCCCAGTATTGTTCCGGGCTGAGTGGGTGGCACTaGAGACATTCTTCGGCAGCTTCCCAAAGCCGCTGCTCTCACTGC +
Preference number: 5 (lower is better)
Translates to: SPCCPQYCSGLSGWH*RHSSAASQSRCSHC
Trigger: GCAGTGAGAGCAGCGGCTTTGGGAAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 90 bp TGGGCAAGCCCGTGCTGCCCCCAGTATTGTTCCGGGCTGAGTGGGTaGCACTGGAGACATTCTTCGGCAGCTTCCCAAAGCCGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: WASPCCPQYCSGLSG*HWRHSSAASQSRCS
Trigger: AGAGCAGCGGCTTTGGGAAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 90 bp TCCAGAGCAGACTCACAGAAGCGAAGCCCCATCCCACACGACGGATaGAAGCCACATTCTCTGCCTCTGCCCCTCCGCAGACCCGCAGGA +
Preference number: 5 (lower is better)
Translates to: SRADSQKRSPIPHDG*KPHSLPLPLRRPAG
Trigger: TCCTGCGGGTCTGCGGAGGGGCAGAGGCAGAGAATGTGGCTTCCATCCGTCGTGTGGGATGGGGCTTCGCTTCTGTGAGTCTGCTCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570482.2
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGAGGGGGCAGTCTGGTaGGAGCTCTTGAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGEGAVW*ELLSGG
Trigger: GCCTCCGCTCAAGAGCTCCAACCAGACTGCCCCCTC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGAGGCCACCACCAGTATaGTTGGCCTTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGRPPPV*LALRAW
Trigger: CCAGGCCCTCAAGGCCAACAATACTGGTGGTGGCCT...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCCTCGTGCAGGCTCTaGAGCCTCCGCACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGASCRL*SLRTSC
Trigger: GCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGTGGCCAGCTCGGCCTaGGCCTGCCGCGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPVASSA*ACRVSS
Trigger: GGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCAC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCTGGTCACTTGGTACTaGGCGTGGGCCTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGLVTWY*AWASCA
Trigger: AGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS TCA 90 bp CACTCTCCTCCTTGGCCAGCGCCATGTCGGCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGTCCCGGCCTTTCCGGATTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: HSPPWPAPCRPPAGE*PAQSPCPGLSGFLP
Trigger: GGGAAGAAATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGACATGGCGCTGGCCAAGGAGGAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp CGCCTCGTGCAGGCTCTTGAGCCTCCGCACTTCCTGCTTGTGCCTTaGAATCAGCTTCTGGATCTCGGGCTCCAGACCTCGGACAGTGAC +
Preference number: 5 (lower is better)
Translates to: RLVQALEPPHFLLVP*NQLLDLGLQTSDSD
Trigger: GTCACTGTCCGAGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp AGCTCCGCCTCGTGCAGGCTCTTGAGCCTCCGCACTTCCTGCTTGTaGCTTGCAATCAGCTTCTGGATCTCGGGCTCCAGACCTCGGACA +
Preference number: 5 (lower is better)
Translates to: SSASCRLLSLRTSCL*LAISFWISGSRPRT
Trigger: TGTCCGAGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS GCA 90 bp TGCAGCAGCTCCGCCTCGTGCAGGCTCTTGAGCCTCCGCACTTCCTaGTTGTGCCTTGCAATCAGCTTCTGGATCTCGGGCTCCAGACCT +
Preference number: 5 (lower is better)
Translates to: CSSSASCRLLSLRTS*LCLAISFWISGSRP
Trigger: AGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGAGGGGGCAGTCTGGTaGGAGCTCTTGAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWEGAVW*ELLSGG
Trigger: GCCTCCGCTCAAGAGCTCCAACCAGACTGCCCCCTC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGCTGCCTTGATGATGTaGTTGAGGGAGGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGAALMM*LREGAV
Trigger: GACTGCCCCCTCCCTCAACAACATCATCAAGGCAGC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGTGCTGCCCCCAGTATaGTTCCGGGCTGAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGVLPPV*FRAEWV
Trigger: CACCCACTCAGCCCGGAACAATACTGGGGGCAGCAC...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCCTCGTGCAGGCTCTaGAGCCTCCGCACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWASCRL*SLRTSC
Trigger: GCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGTTCTCACTCTCCTCCTaGGCCAGCGCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGFSLSS*ASAMSA
Trigger: GGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGAA...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGTGGCCAGCTCGGCCTaGGCCTGCCGCGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTVASSA*ACRVSS
Trigger: GGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCAC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCACCGCAGCCTCATGTaGTGTCCGGAGGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGHRSLM*CPEAAH
Trigger: GTGAGCAGCCTCCGGACACAACATGAGGCTGCGGTG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp GCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGGGCATCCCTGGTCACTaGGTACTTGGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: AFRSSTVFPASLVTWYLAGIPGH*VLGVGL
Trigger: GAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCC...CGCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGAGCGGACGATGGGCTaGGTGGTGGCGGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCERTMG*VVAALP
Trigger: TGGCAGTGCCGCCACCACCAAGCCCATCGTCCGCTC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGGATCTTCTAAGGTTGTaGATGGCCTGGGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGDLLRL*MAWEPP
Trigger: TGGGGGCTCCCAGGCCATCAACAACCTTAGAAGATC...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCAGTCTGTGGGCTCCGTaGGCCTGGGGGAGCCGCTCC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTSLWAP*AWGSRS
Trigger: GGAGCGGCTCCCCCAGGCCAACGGAGCCCACAGACT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGAGGGGGCAGTCTGGTaGGAGCTCTTGAGCGGAGGC +
Preference number: 5 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLEGAVW*ELLSGG
Trigger: GCCTCCGCTCAAGAGCTCCAACCAGACTGCCCCCTC...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGGCTGCTCGCCTGGCTaGGCGTGCCTTCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTGCSPG*ACLLLP
Trigger: CGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGGCTGCTCGCCTGGCTaGGCGTGCCTTCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNGCSPG*ACLLLP
Trigger: CGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGCCTTCTCTGTCTCCTaGACCCGCCGGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCAFSVS*TRRAVR
Trigger: CCTCACGGCCCGGCGGGTCAAGGAGACAGAGAAGGC...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGTACAGCCGCTGCCGTaGCTGCTGCAGCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISVQPLP*LLQRPL
Trigger: CAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGTAC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGTGGCCAGCTCGGCCTaGGCCTGCCGCGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHVASSA*ACRVSS
Trigger: GGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCAC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGTGGCCAGCTCGGCCTaGGCCTGCCGCGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGVASSA*ACRVSS
Trigger: GGAGGAGACGCGGCAGGCCAAGGCCGAGCTGGCCAC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCTGGTCACTTGGTACTaGGCGTGGGCCTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGLVTWY*AWASCA
Trigger: AGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGCATCCCTGGTCACTaGGTACTTGGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWGIPGH*VLGVGL
Trigger: GAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCC...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS TCA 90 bp TTCTCACTCTCCTCCTTGGCCAGCGCCATGTCGGCCTCCAGCCGGTaGATGACCAGCTCAATCTCCTTGTCCCGGCCTTTCCGGATTTCT +
Preference number: 5 (lower is better)
Translates to: FSLSSLASAMSASSR*MTSSISLSRPFRIS
Trigger: AGAAATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCCCTTGTTGCTCCTGTaGTTAGCAGTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGPLLLL*LAVKLG
Trigger: CCCCAACTTCACTGCTAACAACAGGAGCAACAAGGG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTGTCTGGTTGGAGCTCTaGAGCGGAGGCGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPVWLEL*SGGALS
Trigger: GGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGAC...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGGCTGCTCGCCTGGCTaGGCGTGCCTTCTCCTCCCG +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHGCSPG*ACLLLP
Trigger: CGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCCACCACCAGTATTGTaGGCCTTGAGGGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWPPPVL*ALRAWW
Trigger: CCACCAGGCCCTCAAGGCCAACAATACTGGTGGTGG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCCTTCTCTGTCTCCTaGACCCGCCGGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTAFSVS*TRRAVR
Trigger: CCTCACGGCCCGGCGGGTCAAGGAGACAGAGAAGGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGCCTCGTGCAGGCTCTaGAGCCTCCGCACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISASCRL*SLRTSC
Trigger: GCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGATCACCTGGGCCAGGTaGCTGCGCTCGCTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWITWAR*LRSLES
Trigger: GCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGAT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCACCGCAGCCTCATGTaGTGTCCGGAGGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLHRSLM*CPEAAH
Trigger: GTGAGCAGCCTCCGGACACAACATGAGGCTGCGGTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGGTACTTGGCGGGACTCACCTCATGTaGTGTCCGGAGGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: CLPFFDSVPGIPGHLVLGGTHLM*CPEAAH
Trigger: GTGAGCAGCCTCCGGACACAACATGAGGTGAGTCCC...GCCAAGTACCAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGTCTGGTTGGAGCTCTaGAGCGGAGGCGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNVWLEL*SGGALS
Trigger: GGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGAC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGTCTGGTTGGAGCTCTaGAGCGGAGGCGCCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTVWLEL*SGGALS
Trigger: GGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGAC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAGTGCTGCCCCCAGTATaGTTCCGGGCTGAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISVLPPV*FRAEWV
Trigger: CACCCACTCAGCCCGGAACAATACTGGGGGCAGCAC...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCGTGCTGCCCCCAGTATaGTTCCGGGCTGAGTGGGTG +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLVLPPV*FRAEWV
Trigger: CACCCACTCAGCCCGGAACAATACTGGGGGCAGCAC...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGCCTTCTCTGTCTCCTaGACCCGCCGGGCCGTGAGG +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGAFSVS*TRRAVR
Trigger: CCTCACGGCCCGGCGGGTCAAGGAGACAGAGAAGGC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGCTCCGCACTTCCTGCTaGTGCCTTGCAATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGLRTSC*CLAISF
Trigger: GAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAG...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCCTCGTGCAGGCTCTaGAGCCTCCGCACTTCCTGC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTASCRL*SLRTSC
Trigger: GCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGTACAGCCGCTGCCGTaGCTGCTGCAGCGCCCACTG +
Preference number: 5 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQVQPLP*LLQRPL
Trigger: CAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGTAC...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGACCAGCTCAATCTCCTaGTCCCGGCCTTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: KCSHRCLAVGISTTSLCGTSSIS*SRPFRI
Trigger: AATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGT...CCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTTCTCACTCTCCTCCTaGGCCAGCGCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLFSLSS*ASAMSA
Trigger: GGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGAA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTTGTCCCGTAAGCGCTaGATGCGGCTCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLSRKR*MRLSAA
Trigger: GGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATTGTCCCGTAAGCGCTaGATGCGGCTCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISLSRKR*MRLSAA
Trigger: GGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCTTGTCCCGTAAGCGCTaGATGCGGCTCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLSRKR*MRLSAA
Trigger: GGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAA...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TCTGTCCTCTGCCTTCCGTTCTTCGACAGTGTTCCCGGCATCCCTGGTCACTTGAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATG +
Preference number: 5 (lower is better)
Translates to: SVLCLPFFDSVPGIPGHLSSASY*SRKRLM
Trigger: CATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCT...CAAGTGACCAGGGATGCCGGGAACACTGTCGAAGAACGGAAGGCAGAGGACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS TCA 90 bp CCAGCTGGTCCTGCCCAGACTTCTCCATCTCGTCCAAGAAGCTCATaGTGCTTTGTAGCTTGGCCTCCGATAGCAGCGTCCCATCCTCAG +
Preference number: 5 (lower is better)
Translates to: PAGPAQTSPSRPRSS*CFVAWPPIAASHPQ
Trigger: CTGAGGATGGGACGCTGCTATCGGAGGCCAAGCTACAAAGCATCATGAGCTTCTTGGACGAGATGGAGAAGTCTGGGCAGGACCAGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGGAACTCCGGGCATaGGATGGCAAGGTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPLELRA*DGKVKP
Trigger: GGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCAGGGCTCGTTTCTGTaGCAGCTCCTGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLQGSFL*QLLNGC
Trigger: GCAGCCATTCAGGAGCTGCAACAGAAACGAGCCCTG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCAGTATTGTTGGCCTaGAGGGCCTGGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPVLLA*RAWWAV
Trigger: CACTGCCCACCAGGCCCTCAAGGCCAACAATACTGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCCACCACCAGTATTGTaGGCCTTGAGGGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPPPPVL*ALRAWW
Trigger: CCACCAGGCCCTCAAGGCCAACAATACTGGTGGTGG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCCACCACCAGTATTGTaGGCCTTGAGGGCCTGGTGG +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLPPPVL*ALRAWW
Trigger: CCACCAGGCCCTCAAGGCCAACAATACTGGTGGTGG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAAGGCCACCACCAGTATaGTTGGCCTTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISRPPPV*LALRAW
Trigger: CCAGGCCCTCAAGGCCAACAATACTGGTGGTGGCCT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGGGGCGGACAGTGACCTCCTaGATCTTCTTGGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: MQPQVLSRGHLNHQPLWGRTVTS*IFLVFS
Trigger: TGAGAAAACCAAGAAGATCAAGGAGGTCACTGTCCG...CCCCCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGACCAGCTCAATCTCCTaGTCCCGGCCTTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWTSSIS*SRPFRI
Trigger: AATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGT...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTTCTCACTCTCCTCCTaGGCCAGCGCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTFSLSS*ASAMSA
Trigger: GGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGAA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTTGTCCCGTAAGCGCTaGATGCGGCTCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTLSRKR*MRLSAA
Trigger: GGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAA...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTATCACCTGGGCCAGGTaGCTGCGCTCGCTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPITWAR*LRSLES
Trigger: GCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGAT...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCAGCCTCATGTaGTGTCCGGAGGCTGCTCAC +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNHRSLM*CPEAAH
Trigger: GTGAGCAGCCTCCGGACACAACATGAGGCTGCGGTG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCTGGTCACTTGGTACTaGGCGTGGGCCTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLVTWY*AWASCA
Trigger: AGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTGGTCACTTGGTACTaGGCGTGGGCCTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLVTWY*AWASCA
Trigger: AGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGGCATCCCTGGTCACTaGGTACTTGGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTGIPGH*VLGVGL
Trigger: GAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTTGGATCTTCTAAGGTaGTTGATGGCCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWLDLLR*LMAWEP
Trigger: GGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCTGGAACTCCGGGCATaGGATGGCAAGGTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTLELRA*DGKVKP
Trigger: GGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCCCTTGTTGCTCCTGTaGTTAGCAGTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWPLLLL*LAVKLG
Trigger: CCCCAACTTCACTGCTAACAACAGGAGCAACAAGGG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATGGTGGTGACGCAGTaGCCCACTGCTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLMVVTQ*PTAPLL
Trigger: CAACAAGGGAGCAGTGGGCAACTGCGTCACCACCAT...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTCACAGGTGGCTGCCTaGATGATGTTGTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSQVAA*MMLLRE
Trigger: CTCCCTCAACAACATCATCAAGGCAGCCACCTGTGA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCAGGGCTCGTTTCTGTaGCAGCTCCTGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPQGSFL*QLLNGC
Trigger: GCAGCCATTCAGGAGCTGCAACAGAAACGAGCCCTG...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCAGGGCTCGTTTCTGTaGCAGCTCCTGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLQGSFL*QLLNGC
Trigger: GCAGCCATTCAGGAGCTGCAACAGAAACGAGCCCTG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCAGTATTGTTGGCCTaGAGGGCCTGGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNPVLLA*RAWWAV
Trigger: CACTGCCCACCAGGCCCTCAAGGCCAACAATACTGG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGGCCACCACCAGTATaGTTGGCCTTGAGGGCCTGG +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTRPPPV*LALRAW
Trigger: CCAGGCCCTCAAGGCCAACAATACTGGTGGTGGCCT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCGCCATCATCTCCAGGTaGTCCCCAGCTGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTAIISR*SPAASW
Trigger: CCAGGATGCAGCTGGGGACAACCTGGAGATGATGGC...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTTCTCACTCTCCTCCTaGGCCAGCGCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGFSLSS*ASAMSA
Trigger: GGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGAA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACTTCTCACTCTCCTCCTaGGCCAGCGCCATGTCGGCC +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHFSLSS*ASAMSA
Trigger: GGCCGACATGGCGCTGGCCAAGGAGGAGAGTGAGAA...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTTGTCCCGTAAGCGCTaGATGCGGCTCTCGGCAGCC +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLSRKR*MRLSAA
Trigger: GGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATG +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSSASY*SRKRLM
Trigger: CATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCT...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATG +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSSASY*SRKRLM
Trigger: CATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCT...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCATCACCTGGGCCAGGTaGCTGCGCTCGCTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTITWAR*LRSLES
Trigger: GCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGAT...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCTGGTCACTTGGTACTaGGCGTGGGCCTCCTGTGCT +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTLVTWY*AWASCA
Trigger: AGCACAGGAGGCCCACGCCAAGTACCAAGTGACCAG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGGCATCCCTGGTCACTaGGTACTTGGCGTGGGCCTC +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGGIPGH*VLGVGL
Trigger: GAGGCCCACGCCAAGTACCAAGTGACCAGGGATGCC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS TCA 90 bp CCTCCGATAGCAGCGTCCCATCCTCAGGAGGTTCGGGGAACGCACTaGGTTTTCCAAATTTCTCCAAGTTGTCAGCTGTCAGAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PPIAASHPQEVRGTH*VFQISPSCQLSESW
Trigger: CCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAACCTCCTGAGGATGGGACGCTGCTATCGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS-3UTR CAA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCTGGAACTCCGGGCATaGGATGGCAAGGTGAAGCCC +
Preference number: 5 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQLELRA*DGKVKP
Trigger: GGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAG...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCCACTGCTCCCTTGTaGCTCCTGTTGTTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCPTAPL*LLLLAV
Trigger: CACTGCTAACAACAGGAGCAACAAGGGAGCAGTGGG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACATGGTGGTGACGCAGTaGCCCACTGCTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNMVVTQ*PTAPLL
Trigger: CAACAAGGGAGCAGTGGGCAACTGCGTCACCACCAT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCGCTGCCTTGATGATGTaGTTGAGGGAGGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTAALMM*LREGAV
Trigger: GACTGCCCCCTCCCTCAACAACATCATCAAGGCAGC...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACGCTGCCTTGATGATGTaGTTGAGGGAGGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNAALMM*LREGAV
Trigger: GACTGCCCCCTCCCTCAACAACATCATCAAGGCAGC...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCAGTATTGTTGGCCTaGAGGGCCTGGTGGGCAGTG +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHPVLLA*RAWWAV
Trigger: CACTGCCCACCAGGCCCTCAAGGCCAACAATACTGG...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGCCATCATCTCCAGGTaGTCCCCAGCTGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHAIISR*SPAASW
Trigger: CCAGGATGCAGCTGGGGACAACCTGGAGATGATGGC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGCCATCATCTCCAGGTaGTCCCCAGCTGCATCCTGG +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGAIISR*SPAASW
Trigger: CCAGGATGCAGCTGGGGACAACCTGGAGATGATGGC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGTCACTCAGGACCTTCTaGTCCTCAATCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWSLRTF*SSISWS
Trigger: TGACCAGCTGATTGAGGACAAGAAGGTCCTGAGTGA...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTCCGCACTTCCTGCTaGTGCCTTGCAATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLRTSC*CLAISF
Trigger: GAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCTCCGCACTTCCTGCTaGTGCCTTGCAATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLRTSC*CLAISF
Trigger: GAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATG +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSSASY*SRKRLM
Trigger: CATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGATCACCTGGGCCAGGTaGCTGCGCTCGCTAGAAAGC +
Preference number: 5 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQITWAR*LRSLES
Trigger: GCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGAT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCATTGGATCTTCTAAGGTaGTTGATGGCCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISLDLLR*LMAWEP
Trigger: GGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAA...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCCCTTGTTGCTCCTGTaGTTAGCAGTGAAGTTGGGG +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCPLLLL*LAVKLG
Trigger: CCCCAACTTCACTGCTAACAACAGGAGCAACAAGGG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCACTGCTCCCTTGTaGCTCCTGTTGTTAGCAGTG +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNPTAPL*LLLLAV
Trigger: CACTGCTAACAACAGGAGCAACAAGGGAGCAGTGGG...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACATGGTGGTGACGCAGTaGCCCACTGCTCCCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHMVVTQ*PTAPLL
Trigger: CAACAAGGGAGCAGTGGGCAACTGCGTCACCACCAT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp ACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTTCACAGGTGGCTGCCTaGATGATGTTGTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: TVKMQPQVLSRGHLNHQPSQVAA*MMLLRE
Trigger: CTCCCTCAACAACATCATCAAGGCAGCCACCTGTGA...AGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTTCACAGGTGGCTGCCTaGATGATGTTGTTGAGGGAG +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCSQVAA*MMLLRE
Trigger: CTCCCTCAACAACATCATCAAGGCAGCCACCTGTGA...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTGGCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KMQPQVLSRGHLNHQPLWPNFSK*SAVREL
Trigger: CAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGG...CCACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCTCCGCACTTCCTGCTaGTGCCTTGCAATCAGCTTC +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTLRTSC*CLAISF
Trigger: GAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATG +
Preference number: 5 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQSSASY*SRKRLM
Trigger: CATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGGATCTTCTAAGGTTGTaGATGGCCTGGGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGDLLRL*MAWEPP
Trigger: TGGGGGCTCCCAGGCCATCAACAACCTTAGAAGATC...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACGATCTTCTAAGGTTGTaGATGGCCTGGGAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHDLLRL*MAWEPP
Trigger: TGGGGGCTCCCAGGCCATCAACAACCTTAGAAGATC...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCTGCGTGGTGCTGTaGGATCTTCTAAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: RPPLLLKCSHRCLAVGISTCVVL*DLLRLL
Trigger: CAACAACCTTAGAAGATCCAACAGCACCACGCAGGT...TGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCATGATGCTTTGTAGCTaGGCCTCCGATAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTMMLCS*ASDSSV
Trigger: GACGCTGCTATCGGAGGCCAAGCTACAAAGCATCAT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACATGATGCTTTGTAGCTaGGCCTCCGATAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNMMLCS*ASDSSV
Trigger: GACGCTGCTATCGGAGGCCAAGCTACAAAGCATCAT...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGCGGACAGTGACCTCCTaGATCTTCTTGGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: VKMQPQVLSRGHLNHQPLRTVTS*IFLVFS
Trigger: TGAGAAAACCAAGAAGATCAAGGAGGTCACTGTCCG...CAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGCCTCTGTCTTCCTGCTTGTGCCTaGCAATCAGCTTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: LKCSHRCLAVGISTTSLCLPACA*QSASGS
Trigger: AGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAG...ACAGAGGCTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp ACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCCTTCCTGCTTGTGCCTaGCAATCAGCTTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: TASFTVKMQPQVLSRGHLLPACA*QSASGS
Trigger: AGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAG...GAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACACCAGCTCAATCTCCTaGTCCCGGCCTTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: SFTVKMQPQVLSRGHLNHTSSIS*SRPFRI
Trigger: AATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGT...GTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGACCAGCTCAATCTCCTaGTCCCGGCCTTTCCGGATT +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGTSSIS*SRPFRI
Trigger: AATCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000573053.5
CDS-3UTR CAA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGTTGGATCTTCTAAGGTaGTTGATGGCCTGGGAGCCC +
Preference number: 5 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQLDLLR*LMAWEP
Trigger: GGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAA...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCTGCGTGGTGCTGTaGGATCTTCTAAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTTCVVL*DLLRLL
Trigger: CAACAACCTTAGAAGATCCAACAGCACCACGCAGGT...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGATGATGCTTTGTAGCTaGGCCTCCGATAGCAGCGTC +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGMMLCS*ASDSSV
Trigger: GACGCTGCTATCGGAGGCCAAGCTACAAAGCATCAT...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp GCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACTCACTCAGGACCTTCTaGTCCTCAATCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: ASFTVKMQPQVLSRGHLNSLRTF*SSISWS
Trigger: TGACCAGCTGATTGAGGACAAGAAGGTCCTGAGTGA...GTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCTTCCTGCTTGTGCCTaGCAATCAGCTTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTLPACA*QSASGS
Trigger: AGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp TTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCAGACCTGCGTGGTGCTGTaGGATCTTCTAAGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: FTVKMQPQVLSRGHLNHQTCVVL*DLLRLL
Trigger: CAACAACCTTAGAAGATCCAACAGCACCACGCAGGT...CTGGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTPNFSK*SAVREL
Trigger: CAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGTCACTCAGGACCTTCTaGTCCTCAATCAGCTGGTCA +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGSLRTF*SSISWS
Trigger: TGACCAGCTGATTGAGGACAAGAAGGTCCTGAGTGA...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCACCCGGACAGTGACCTCCTaGATCTTCTTGGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PLLLKCSHRCLAVGISTTRTVTS*IFLVFS
Trigger: TGAGAAAACCAAGAAGATCAAGGAGGTCACTGTCCG...GGTGGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp CCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCATCTCAACCCGGACAGTGACCTCCTaGATCTTCTTGGTTTTCTCA +
Preference number: 5 (lower is better)
Translates to: PPLLLKCSHRCLAVGISTRTVTS*IFLVFS
Trigger: TGAGAAAACCAAGAAGATCAAGGAGGTCACTGTCCG...GGTTGAGATGCCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCTTCCTGCTTGTGCCTaGCAATCAGCTTCTGGATCT +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGLPACA*QSASGS
Trigger: AGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
CDS-3UTR CAA 90 bp AAAACAACGGCCTCCTTTACTGTTAAAATGCAGCCACAGGTGCTTAGCCGTGGGCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: KTTASFTVKMQPQVLSRGPNFSK*SAVREL
Trigger: CAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGG...CCCACGGCTAAGCACCTGTGGCTGCATTTTAACAGTAAAGGAGGCCGTTGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
CDS CCA 72 bp GCTCCGGGACGCTGCCGATGGCCCGGGTGCCTTTCATaGTGGACAAGGCAGGTCCTGCGCGGGCCGGGGGCG +
Preference number: 6 (lower is better)
Translates to: APGRCRWPGCLS*WTRQVLRGPGA
Trigger: CGCCCCCGGCCCGCGCAGGACCTGCCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGC
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp AGGCGGAGGGAGACCTGTCAGACTCAGGTCCACACCTaGTGGGCTGCGCTCCGGGACGCTGCCGATGGCCCG +
Preference number: 6 (lower is better)
Translates to: RRRETCQTQVHT*WAALRDAADGP
Trigger: CGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAGGTCTCCCTCCGCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp CTTGGCCTGAAGCAAGTGCTCCAGGCGGGCAGCTCCTaGTCCGCGCCGCTGCACCTGGTGCCGGTACCAGCG +
Preference number: 6 (lower is better)
Translates to: LGLKQVLQAGSS*SAPLHLVPVPA
Trigger: CGCTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTGGAGCACTTGCTTCAGGCCAAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 72 bp TGGCGCAGGCAGCGCTGCGAGGCCCGCTCATCCGACTaGAGCAGCTCCGCCTCGTGCAGGCTCTTGAGCCTC +
Preference number: 6 (lower is better)
Translates to: WRRQRCEARSSD*SSSASCRLLSL
Trigger: GAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCTCGCAGCGCTGCCTGCGCCA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS CCA 72 bp CGGAGGGAGACCTGTCAGACTCAGGTCCACACCTGCTaGGCTGCGCTCCGGGACGCTGCCGATGGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: RRETCQTQVHTC*AALRDAADGPG
Trigger: ACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGAGTCTGACAGGTCTCCCTCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp CGCTGGCCCAGGCGTATCTGCCCCTGTGATGGGTCCTaGGGCGGGGCAGCACGTCCGGCTCCTTCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RWPRRICPCDGS*GGAARPAPSPA
Trigger: TGCTGGAGAAGGAGCCGGACGTGCTGCCCCGCCCCAGGACCCATCACAGGGGCAGATACGCCTGGGCCAGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp CTCAGCTCCTGTTCCCGGTTCAGCAGCCACGCCTCCTaGGGGGACATGCGCTCCTTCCTGGTGCGGCCGGCC +
Preference number: 6 (lower is better)
Translates to: LSSCSRFSSHAS*GDMRSFLVRPA
Trigger: GGCCGGCCGCACCAGGAAGGAGCGCATGTCCCCCCAGGAGGCGTGGCTGCTGAACCGGGAACAGGAGCTGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000573053.5
CDS CAA 90 bp TTCTGCTCGCTGCCTGTGACCACGGAGACAGAGCGGACGATGGGCTaGGTGGTGGCGGCACTGCCAGGACGCCGGGACACAGGCGGAGGG +
Preference number: 6 (lower is better)
Translates to: FCSLPVTTETERTMG*VVAALPGRRDTGGG
Trigger: CCCTCCGCCTGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCTCCGTGGTCACAGGCAGCGAGCAGAA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp CAGCCCCGAGGTCCAGCAGGGCTGGCCACAGGGACTCACCTCATGTaGTGTCCGGAGGCTGCTCACGGCCTCCTCCTTCCTCGCGAGGGC +
Preference number: 6 (lower is better)
Translates to: QPRGPAGLATGTHLM*CPEAAHGLLLPREG
Trigger: GCCCTCGCGAGGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAACATGAGGTGAGTCCCTGTGGCCAGCCCTGCTGGACCTCGGGGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS GCA 72 bp AGACAGAGCGGACGATGGGCTTGGTGGTGGCGGCACTaGCAGGACGCCGGGACACAGGCGGAGGGAGACCTG +
Preference number: 6 (lower is better)
Translates to: RQSGRWAWWWRH*QDAGTQAEGDL
Trigger: CAGGTCTCCCTCCGCCTGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp AAGTGCTCCAGGCGGGCAGCTCCTGCTCCGCGCCGCTaGACCTGGTGCCGGTACCAGCGCTGGATGGTGACA +
Preference number: 6 (lower is better)
Translates to: KCSRRAAPAPRR*TWCRYQRWMVT
Trigger: TGTCACCATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCGCGGAGCAGGAGCTGCCCGCCTGGAGCACTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 72 bp CATCCTCCGTGGTCACCTCGCTGGCCCAGGCGTATCTaGCCCTGTGATGGGTCCTGGGGCGGGGCAGCACGT +
Preference number: 6 (lower is better)
Translates to: HPPWSPRWPRRI*PCDGSWGGAAR
Trigger: ACGTGCTGCCCCGCCCCAGGACCCATCACAGGGGCAGATACGCCTGGGCCAGCGAGGTGACCACGGAGGATG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269392.8
ENST00000575907.5
CDS GCA 72 bp TGCTGCTGCAGCGCCCACTGCTCCTGCTCCAGGTGCTaGTGGAACCGCTGCCGAGCACGTTCGCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: CCCSAHCSCSRC*WNRCRARSRSC
Trigger: GCAGGAGCGCGAACGTGCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS GCA 72 bp TCCTCCAGCGCCCGCTCCTTCTGCCGCACAAGGCCCTaGAGACGCAGATTCTCGCCCTCGGCCTCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: SSSARSFCRTRP*RRRFSPSASPS
Trigger: GCTTGGGGAGGCCGAGGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCTGGAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 72 bp CTCGGCCTTGGCCTGCCGCGTCTCCTCCTCAGAGGCTaGCAGCCGGTCCTCGAACTCCTGGCGGATCACCTG +
Preference number: 6 (lower is better)
Translates to: LGLGLPRLLLRG*QPVLELLADHL
Trigger: CAGGTGATCCGCCAGGAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGAGACGCGGCAGGCCAAGGCCGAG
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 72 bp AGCTGGCGTCATCCTCCTCGCTGGCCCAGGCGTATCTaGCCCTGTGATGGGTCCTGGGGCGGGGCAGCACGT +
Preference number: 6 (lower is better)
Translates to: SWRHPPRWPRRI*PCDGSWGGAAR
Trigger: ACGTGCTGCCCCGCCCCAGGACCCATCACAGGGGCAGATACGCCTGGGCCAGCGAGGAGGATGACGCCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
CDS CCA 72 bp CCACACCTGCTGGGCTGCGCTCCGGGACGCTGCCGATaGCCCGGGTGCCTTTCATGGTGGACAAGGCAGGTC +
Preference number: 6 (lower is better)
Translates to: PHLLGCAPGRCR*PGCLSWWTRQV
Trigger: GACCTGCCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp TGCTGCAGCGCCCACTGCTCCTGCTCCAGGTGCTGCTaGAACCGCTGCCGAGCACGTTCGCGCTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: CCSAHCSCSRCC*NRCRARSRSCW
Trigger: CCAGCAGGAGCGCGAACGTGCTCGGCAGCGGTTCCAGCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS TCA 72 bp TGGTGGGCAGTGCCGCCTGGTGTGGGGGACAGCTCCTaGGCAGGCTGCCGCATTCCTGGCACTCTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: WWAVPPGVGDSS*AGCRIPGTLVS
Trigger: GGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCACACCAGGCGGCACTGCCCACCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp TCAGGTCCACACCTGCTGGGCTGCGCTCCGGGACGCTaGCGATGGCCCGGGTGCCTTTCATGGTGGACAAGG +
Preference number: 6 (lower is better)
Translates to: SGPHLLGCAPGR*RWPGCLSWWTR
Trigger: CCTTGTCCACCATGAAAGGCACCCGGGCCATCGGCAGCGTCCCGGAGCGCAGCCCAGCAGGTGTGGACCTGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp CCTCCGTCACCTCCTTCCGCCTGGGCAAGCCCGTGCTaGCCCCAGTATTGTTCCGGGCTGAGTGGGTGGCAC +
Preference number: 6 (lower is better)
Translates to: PPSPPSAWASPC*PQYCSGLSGWH
Trigger: GTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGACGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 72 bp CCTCCTCCGTCACCTCCTTCCGCCTGGGCAAGCCCGTaGTGCCCCCAGTATTGTTCCGGGCTGAGTGGGTGG +
Preference number: 6 (lower is better)
Translates to: PPPSPPSAWASP*CPQYCSGLSGW
Trigger: CCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGACGGAGGAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 72 bp TTCACCGCCTGCGCATCCTCCAGCGCCCGCTCCTTCTaGCGCACAAGGCCCTGCAGACGCAGATTCTCGCCC +
Preference number: 6 (lower is better)
Translates to: FTACASSSARSF*RTRPCRRRFSP
Trigger: GGGCGAGAATCTGCGTCTGCAGGGCCTTGTGCGGCAGAAGGAGCGGGCGCTGGAGGATGCGCAGGCGGTGAA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 72 bp GCCCCATCCCACACGACGGATGGAAGCCACATTCTCTaGCTCTGCCCCTCCGCAGACCCGCAGGAAGGCGGG +
Preference number: 6 (lower is better)
Translates to: APSHTTDGSHIL*LCPSADPQEGG
Trigger: CCCGCCTTCCTGCGGGTCTGCGGAGGGGCAGAGGCAGAGAATGTGGCTTCCATCCGTCGTGTGGGATGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570482.2
CDS CCA 72 bp CACTGGGGCTGCCCTCGAAGAGCATCAGGAAGTCTGTaGGCTCCGTTGGCCTGGGGGAGCCGCTCCGAGGCT +
Preference number: 6 (lower is better)
Translates to: HWGCPRRASGSL*APLAWGSRSEA
Trigger: AGCCTCGGAGCGGCTCCCCCAGGCCAACGGAGCCCACAGACTTCCTGATGCTCTTCGAGGGCAGCCCCAGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp TCCTCCCGGGCCTTCCTCCTGGCTGCCTCTTTCTGCTaGTGCAGGTCCAAGAGGGTCCCCTCGCCTGACCGC +
Preference number: 6 (lower is better)
Translates to: SSRAFLLAASFC*CRSKRVPSPDR
Trigger: GCGGTCAGGCGAGGGGACCCTCTTGGACCTGCACCAGCAGAAAGAGGCAGCCAGGAGGAAGGCCCGGGAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 72 bp CTGCCTGTGACCACGGAGACAGAGCGGACGATGGGCTaGGTGGTGGCGGCACTGCCAGGACGCCGGGACACA +
Preference number: 6 (lower is better)
Translates to: LPVTTETERTMG*VVAALPGRRDT
Trigger: TGTGTCCCGGCGTCCTGGCAGTGCCGCCACCACCAAGCCCATCGTCCGCTCTGTCTCCGTGGTCACAGGCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 72 bp CCTGCAGCAGGGAGGCCACCACCAGTATTGTTGGCCTaGAGGGCCTGGTGGGCAGTGCCGCCTGGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: PAAGRPPPVLLA*RAWWAVPPGVG
Trigger: CCCCACACCAGGCGGCACTGCCCACCAGGCCCTCAAGGCCAACAATACTGGTGGTGGCCTCCCTGCTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp GGCCTGGGGGAGCCGCTCCGAGGCTGGCTGACCTGCGTGGTGCTGTaGGATCTTCTAAGGTTGTTGATGGCCTGGGAGCCCCCAGGCCCT +
Preference number: 6 (lower is better)
Translates to: GLGEPLRGWLTCVVL*DLLRLLMAWEPPGP
Trigger: AGGGCCTGGGGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCGGAGCGGCTCCCCCAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp CTCCGCGGGCCCGCTGGTGAGTCAAGGGCACTGGAACTCCGGGCATaGGATGGCAAGGTGAAGCCCCGGGGCTGGTCATCCAGGACGTTC +
Preference number: 6 (lower is better)
Translates to: LRGPAGESRALELRA*DGKVKPRGWSSRTF
Trigger: GAACGTCCTGGATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCACCAGCGGGCCCGCGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp CAGCCGCTCCCTCTCCTCAGCCACCTCACTGTACAGCCGCTGCCGTaGCTGCTGCAGCGCCCACTGCTCCTGCTCCAGGTGCTGCTGGAA +
Preference number: 6 (lower is better)
Translates to: QPLPLLSHLTVQPLP*LLQRPLLLLQVLLE
Trigger: TTCCAGCAGCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGTACAGTGAGGTGGCTGAGGAGAGGGAGCGGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS CAA 90 bp GCTGCCAGCCGGTCCTCGAACTCCTGGCGGATCACCTGGGCCAGGTaGCTGCGCTCGCTAGAAAGCTGCTCGTTCACCGCCTGCGCATCC +
Preference number: 6 (lower is better)
Translates to: AASRSSNSWRITWAR*LRSLESCSFTACAS
Trigger: GGATGCGCAGGCGGTGAACGAGCAGCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCGGCTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS TCA 72 bp TCCCCAAGCTGGCCCTTCAGCTCCGAGCACCGCTCCTaGAGCTTCCGCTCCGACTGCTCCAGCTCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: SPSWPFSSEHRS*SFRSDCSSSES
Trigger: GCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCTTCAGGAGCGGTGCTCGGAGCTGAAGGGCCAGCTTGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS GCA 72 bp TTGCAGCTCCTGAATGGCTGCTCGCCTGGCTTGGCGTaGCTTCTCCTCCCGGGCCTTCCTCCTGGCTGCCTC +
Preference number: 6 (lower is better)
Translates to: LQLLNGCSPGLA*LLLPGLPPGCL
Trigger: GAGGCAGCCAGGAGGAAGGCCCGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTGCAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp GAGGCCCGCTCATCCGACTGCAGCAGCTCCGCCTCGTaGAGGCTCTTGAGCCTCCGCACTTCCTGCTTGTGC +
Preference number: 6 (lower is better)
Translates to: EARSSDCSSSAS*RLLSLRTSCLC
Trigger: GCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS GCA 72 bp CTCTCCTCAGCCACCTCACTGTACAGCCGCTGCCGTTaGTGCTGCAGCGCCCACTGCTCCTGCTCCAGGTGC +
Preference number: 6 (lower is better)
Translates to: LSSATSLYSRCR*CCSAHCSCSRC
Trigger: GCACCTGGAGCAGGAGCAGTGGGCGCTGCAGCAGCAACGGCAGCGGCTGTACAGTGAGGTGGCTGAGGAGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000269392.8
ENST00000450824.7
ENST00000573053.5
CDS CCA 72 bp GCTCCGCGCCGCTGCACCTGGTGCCGGTACCAGCGCTaGATGGTGACAGTGGCCTGGTTCACCTGGTGGATA +
Preference number: 6 (lower is better)
Translates to: APRRCTWCRYQR*MVTVAWFTWWI
Trigger: TATCCACCAGGTGAACCAGGCCACTGTCACCATCCAGCGCTGGTACCGGCACCAGGTGCAGCGGCGCGGAGC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 72 bp GAGCAGGCTGCCGCATTCCTGGCACTCTGGTCTCCCTaGGATTCTCAGGTGGCCCACGCTCGGCAGTGCTCG +
Preference number: 6 (lower is better)
Translates to: EQAAAFLALWSP*DSQVAHARQCS
Trigger: CGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp GCTGCCAGCCGGTCCTCGAACTCCTGGCGGATCACCTaGGCCAGGTTGCTGCGCTCGCTAGAAAGCTGCTCG +
Preference number: 6 (lower is better)
Translates to: AASRSSNSWRIT*ARLLRSLESCS
Trigger: CGAGCAGCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCGGCTGGCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS CCA 72 bp TCCTCCTCAGAGGCTGCCAGCCGGTCCTCGAACTCCTaGCGGATCACCTGGGCCAGGTTGCTGCGCTCGCTA +
Preference number: 6 (lower is better)
Translates to: SSSEAASRSSNS*RITWARLLRSL
Trigger: TAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCGGCTGGCAGCCTCTGAGGAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS TCA 72 bp GGCCACGGTGCATTCTTTCCTCCGCGGGCCCGCTGGTaGGTCAAGGGCACTGGAACTCCGGGCATTGGATGG +
Preference number: 6 (lower is better)
Translates to: GHGAFFPPRARW*VKGTGTPGIGW
Trigger: CCATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCACCAGCGGGCCCGCGGAGGAAAGAATGCACCGTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp ACAGCTCCTGAGCAGGCTGCCGCATTCCTGGCACTCTaGTCTCCCTGGGATTCTCAGGTGGCCCACGCTCGG +
Preference number: 6 (lower is better)
Translates to: TAPEQAAAFLAL*SPWDSQVAHAR
Trigger: CCGAGCGTGGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTCAGGAGCTGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp TGTGGGGGACAGCTCCTGAGCAGGCTGCCGCATTCCTaGCACTCTGGTCTCCCTGGGATTCTCAGGTGGCCC +
Preference number: 6 (lower is better)
Translates to: CGGQLLSRLPHS*HSGLPGILRWP
Trigger: GGGCCACCTGAGAATCCCAGGGAGACCAGAGTGCCAGGAATGCGGCAGCCTGCTCAGGAGCTGTCCCCCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp GCCTCCGGCACCCACCCCTCCTGCTGGGAGTCCAGCTaGTCCTGCCCAGACTTCTCCATCTCGTCCAAGAAG +
Preference number: 6 (lower is better)
Translates to: ASGTHPSCWESS*SCPDFSISSKK
Trigger: CTTCTTGGACGAGATGGAGAAGTCTGGGCAGGACCAGCTGGACTCCCAGCAGGAGGGGTGGGTGCCGGAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 72 bp CCCGCTGGTGAGTCAAGGGCACTGGAACTCCGGGCATaGGATGGCAAGGTGAAGCCCCGGGGCTGGTCATCC +
Preference number: 6 (lower is better)
Translates to: PAGESRALELRA*DGKVKPRGWSS
Trigger: GGATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAGTGCCCTTGACTCACCAGCGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 72 bp TCCGACTGCTCCAGCTCGGAGAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATGCGGCTCTCGGCAGCC +
Preference number: 6 (lower is better)
Translates to: SDCSSSESSASY*SRKRLMRLSAA
Trigger: GGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCTCTCCGAGCTGGAGCAGTCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS CAA 72 bp CGGTCCTCGAACTCCTGGCGGATCACCTGGGCCAGGTaGCTGCGCTCGCTAGAAAGCTGCTCGTTCACCGCC +
Preference number: 6 (lower is better)
Translates to: RSSNSWRITWAR*LRSLESCSFTA
Trigger: GGCGGTGAACGAGCAGCTTTCTAGCGAGCGCAGCAACCTGGCCCAGGTGATCCGCCAGGAGTTCGAGGACCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS CAA 72 bp GGTCCAGCAGGGCTGGCCACAGGGACTCACCTCATGTaGTGTCCGGAGGCTGCTCACGGCCTCCTCCTTCCT +
Preference number: 6 (lower is better)
Translates to: GPAGLATGTHLM*CPEAAHGLLLP
Trigger: AGGAAGGAGGAGGCCGTGAGCAGCCTCCGGACACAACATGAGGTGAGTCCCTGTGGCCAGCCCTGCTGGACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570817.5
CDS CAA 90 bp CTCCGAGGCTGGCTGACCTGCGTGGTGCTGTTGGATCTTCTAAGGTaGTTGATGGCCTGGGAGCCCCCAGGCCCTGTGGCCTCCAGCACC +
Preference number: 6 (lower is better)
Translates to: LRGWLTCVVLLDLLR*LMAWEPPGPVASST
Trigger: GGTGCTGGAGGCCACAGGGCCTGGGGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp TCCGTCACCTCCTTCCGCCTGGGCAAGCCCGTGCTGCCCCCAGTATaGTTCCGGGCTGAGTGGGTGGCACTGGAGACATTCTTCGGCAGC +
Preference number: 6 (lower is better)
Translates to: SVTSFRLGKPVLPPV*FRAEWVALETFFGS
Trigger: GCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAGGAGGTGACGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS TCA 72 bp CAAGGGCACTGGAACTCCGGGCATTGGATGGCAAGGTaGAGCCCCGGGGCTGGTCATCCAGGACGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: QGHWNSGHWMAR*SPGAGHPGRSR
Trigger: CCTGGAACGTCCTGGATGACCAGCCCCGGGGCTTCACCTTGCCATCCAATGCCCGGAGTTCCAGTGCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS TCA 72 bp CCTTGGCCAGCGCCATGTCGGCCTCCAGCCGGTGAATaGCCAGCTCAATCTCCTTGTCCCGGCCTTTCCGGA +
Preference number: 6 (lower is better)
Translates to: PWPAPCRPPAGE*PAQSPCPGLSG
Trigger: TCCGGAAAGGCCGGGACAAGGAGATTGAGCTGGTCATTCACCGGCTGGAGGCCGACATGGCGCTGGCCAAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS TCA 72 bp CGCAGGAAGGCGGGAGGACAGGACCAATACCGAGGCTaGCAGGAGGGATGGGGAGACTGCAGGAAAGGGGCA +
Preference number: 6 (lower is better)
Translates to: RRKAGGQDQYRG*QEGWGDCRKGA
Trigger: TGCCCCTTTCCTGCAGTCTCCCCATCCCTCCTGTCAGCCTCGGTATTGGTCCTGTCCTCCCGCCTTCCTGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570482.2
CDS GCA 72 bp CCTGCTCGGGGCCATCATCTCCAGGTTGTCCCCAGCTaGATCCTGGGCAAGAACGTCCTGCGTCCTGTCCTC +
Preference number: 6 (lower is better)
Translates to: PARGHHLQVVPS*ILGKNVLRPVL
Trigger: GAGGACAGGACGCAGGACGTTCTTGCCCAGGATGCAGCTGGGGACAACCTGGAGATGATGGCCCCGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 72 bp GCCTTGATGATGTTGTTGAGGGAGGGGGCAGTCTGGTaGGAGCTCTTGAGCGGAGGCGCCCTCTCCGAGGGG +
Preference number: 6 (lower is better)
Translates to: ALMMLLREGAVW*ELLSGGALSEG
Trigger: CCCCTCGGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGACTGCCCCCTCCCTCAACAACATCATCAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CAA 72 bp TCCTTCCGCCTGGGCAAGCCCGTGCTGCCCCCAGTATaGTTCCGGGCTGAGTGGGTGGCACTGGAGACATTC +
Preference number: 6 (lower is better)
Translates to: SFRLGKPVLPPV*FRAEWVALETF
Trigger: GAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCCAGGCGGAAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CAA 72 bp TTTCTGTTGCAGCTCCTGAATGGCTGCTCGCCTGGCTaGGCGTGCCTTCTCCTCCCGGGCCTTCCTCCTGGC +
Preference number: 6 (lower is better)
Translates to: FLLQLLNGCSPG*ACLLLPGLPPG
Trigger: GCCAGGAGGAAGGCCCGGGAGGAGAAGGCACGCCAAGCCAGGCGAGCAGCCATTCAGGAGCTGCAACAGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp CGAGGCTGGCTGACCTGCGTGGTGCTGTTGGATCTTCTAAGGTTGTaGATGGCCTGGGAGCCCCCAGGCCCTGTGGCCTCCAGCACCTTC +
Preference number: 6 (lower is better)
Translates to: RGWLTCVVLLDLLRL*MAWEPPGPVASSTF
Trigger: GAAGGTGCTGGAGGCCACAGGGCCTGGGGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp GAGGCCCGCTCATCCGACTGCAGCAGCTCCGCCTCGTGCAGGCTCTaGAGCCTCCGCACTTCCTGCTTGTGCCTTGCAATCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: EARSSDCSSSASCRL*SLRTSCLCLAISFW
Trigger: CCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATGAGCGGGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS CAA 90 bp AGCTTCCGCTCCGACTGCTCCAGCTCGGAGAGCTCGGCCTCGTACTaGTCCCGTAAGCGCTTGATGCGGCTCTCGGCAGCCTTCTCACTC +
Preference number: 6 (lower is better)
Translates to: SFRSDCSSSESSASY*SRKRLMRLSAAFSL
Trigger: GAGTGAGAAGGCTGCCGAGAGCCGCATCAAGCGCTTACGGGACAAGTACGAGGCCGAGCTCTCCGAGCTGGAGCAGTCGGAGCGGAAGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570817.5
ENST00000571292.1
ENST00000573053.5
ENST00000575907.5
CDS CAA 90 bp AGCAGCTCCGCCTCGTGCAGGCTCTTGAGCCTCCGCACTTCCTGCTaGTGCCTTGCAATCAGCTTCTGGATCTCGGGCTCCAGACCTCGG +
Preference number: 6 (lower is better)
Translates to: SSSASCRLLSLRTSC*CLAISFWISGSRPR
Trigger: CCGAGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS TCA 72 bp GGGCAAGCCCGTGCTGCCCCCAGTATTGTTCCGGGCTaGGTGGGTGGCACTGGAGACATTCTTCGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: GQARAAPSIVPG*VGGTGDILRQL
Trigger: AAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTTGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 72 bp TGCTCAGGCTGGCAGGCCTCTTTTTCCCACTGGGGCTaGCCTCGAAGAGCATCAGGAAGTCTGTGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: CSGWQASFSHWG*PRRASGSLWAP
Trigger: CGGAGCCCACAGACTTCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGCCTGCCAGCCTGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp TCTCCCTGGGATTCTCAGGTGGCCCACGCTCGGCAGTaGTCGCCTTCTGGGCTCTCAGGGCTCGTTTCTGTT +
Preference number: 6 (lower is better)
Translates to: SPWDSQVAHARQ*SPSGLSGLVSV
Trigger: AACAGAAACGAGCCCTGAGAGCCCAGAAGGCGAGCACTGCCGAGCGTGGGCCACCTGAGAATCCCAGGGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp GGGCTGTGCTCAGGCTGGCAGGCCTCTTTTTCCCACTaGGGCTGCCCTCGAAGAGCATCAGGAAGTCTGTGG +
Preference number: 6 (lower is better)
Translates to: GLCSGWQASFSH*GCPRRASGSLW
Trigger: CCACAGACTTCCTGATGCTCTTCGAGGGCAGCCCCAGTGGGAAAAAGAGGCCTGCCAGCCTGAGCACAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp GCTGCCTTGATGATGTTGTTGAGGGAGGGGGCAGTCTaGTTGGAGCTCTTGAGCGGAGGCGCCCTCTCCGAG +
Preference number: 6 (lower is better)
Translates to: AALMMLLREGAV*LELLSGGALSE
Trigger: CTCGGAGAGGGCGCCTCCGCTCAAGAGCTCCAACCAGACTGCCCCCTCCCTCAACAACATCATCAAGGCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CAA 72 bp GAGCCGCTCCGAGGCTGGCTGACCTGCGTGGTGCTGTaGGATCTTCTAAGGTTGTTGATGGCCTGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: EPLRGWLTCVVL*DLLRLLMAWEP
Trigger: GGGCTCCCAGGCCATCAACAACCTTAGAAGATCCAACAGCACCACGCAGGTCAGCCAGCCTCGGAGCGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS TCA 72 bp TCTCCGAGGGGGTGTAGCGGTTGTGCACCATGGTGGTaGCGCAGTTGCCCACTGCTCCCTTGTTGCTCCTGT +
Preference number: 6 (lower is better)
Translates to: SPRGCSGCAPWW*RSCPLLPCCSC
Trigger: ACAGGAGCAACAAGGGAGCAGTGGGCAACTGCGTCACCACCATGGTGCACAACCGCTACACCCCCTCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS TCA 72 bp CATCCGACTGCAGCAGCTCCGCCTCGTGCAGGCTCTTaGGCCTCCGCACTTCCTGCTTGTGCCTTGCAATCA +
Preference number: 6 (lower is better)
Translates to: HPTAAAPPRAGS*ASALPACALQS
Trigger: TGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGAGCTGCTGCAGTCGGATG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS TCA 72 bp TCTCCGAGGGGGTGTAGCGGTTGTGCACCATGGTGGTaGCGCAGTTGCCCACTGCTCCCTTGTTGCTCCCAA +
Preference number: 6 (lower is better)
Translates to: SPRGCSGCAPWW*RSCPLLPCCSQ
Trigger: TTGGGAGCAACAAGGGAGCAGTGGGCAACTGCGTCACCACCATGGTGCACAACCGCTACACCCCCTCGGAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570482.2
CDS GCA 72 bp CCCAAAGCCGCTGCTCTCACTGCCCTCACAGGTGGCTaGCTTGATGATGTTGTTGAGGGAGGGGGCAGTCTG +
Preference number: 6 (lower is better)
Translates to: PKAAALTALTGG*LDDVVEGGGSL
Trigger: CAGACTGCCCCCTCCCTCAACAACATCATCAAGGCAGCCACCTGTGAGGGCAGTGAGAGCAGCGGCTTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS GCA 72 bp TCCGCCTCGTGCAGGCTCTTGAGCCTCCGCACTTCCTaGTTGTGCCTTGCAATCAGCTTCTGGATCTCGGGC +
Preference number: 6 (lower is better)
Translates to: SASCRLLSLRTS*LCLAISFWISG
Trigger: GCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGAGGCGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS CCA 72 bp CCGTGCTGCCCCCAGTATTGTTCCGGGCTGAGTGGGTaGCACTGGAGACATTCTTCGGCAGCTTCCCAAAGC +
Preference number: 6 (lower is better)
Translates to: PCCPQYCSGLSG*HWRHSSAASQS
Trigger: GCTTTGGGAAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 72 bp AAGCCCGTGCTGCCCCCAGTATTGTTCCGGGCTGAGTaGGTGGCACTGGAGACATTCTTCGGCAGCTTCCCA +
Preference number: 6 (lower is better)
Translates to: KPVLPPVLFRAE*VALETFFGSFP
Trigger: TGGGAAGCTGCCGAAGAATGTCTCCAGTGCCACCCACTCAGCCCGGAACAATACTGGGGGCAGCACGGGCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000570482.2
ENST00000575907.5
CDS CCA 72 bp CTCCGCACTTCCTGCTTGTGCCTTGCAATCAGCTTCTaGATCTCGGGCTCCAGACCTCGGACAGTGACCTCC +
Preference number: 6 (lower is better)
Translates to: LRTSCLCLAISF*ISGSRPRTVTS
Trigger: GGAGGTCACTGTCCGAGGTCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS GCA 72 bp TCGTGCAGGCTCTTGAGCCTCCGCACTTCCTGCTTGTaGCTTGCAATCAGCTTCTGGATCTCGGGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: SCRLLSLRTSCL*LAISFWISGSR
Trigger: TCTGGAGCCCGAGATCCAGAAGCTGATTGCAAGGCACAAGCAGGAAGTGCGGAGGCTCAAGAGCCTGCACGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000573053.5
ENST00000575907.5
CDS CCA 72 bp TTCCAAATTTCTCCAAGTTGTCAGCTGTCAGAGAGCTaGCGTCATCCTCCGTGGTCACCTCGCTGGCCCAGG +
Preference number: 6 (lower is better)
Translates to: FQISPSCQLSES*RHPPWSPRWPR
Trigger: CCTGGGCCAGCGAGGTGACCACGGAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000269392.8
ENST00000575907.5
CDS CAA 90 bp CCAGACTTCTCCATCTCGTCCAAGAAGCTCATGATGCTTTGTAGCTaGGCCTCCGATAGCAGCGTCCCATCCTCAGGAGGTTCGGGGAAC +
Preference number: 6 (lower is better)
Translates to: PDFSISSKKLMMLCS*ASDSSVPSSGGSGN
Trigger: GTTCCCCGAACCTCCTGAGGATGGGACGCTGCTATCGGAGGCCAAGCTACAAAGCATCATGAGCTTCTTGGACGAGATGGAGAAGTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 90 bp TCAGGAGGTTCGGGGAACGCACTGAGTTTTCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTGGCGTCATCCTCCTCGCTGGCCCAG +
Preference number: 6 (lower is better)
Translates to: SGGSGNALSFPNFSK*SAVRELASSSSLAQ
Trigger: CTGGGCCAGCGAGGAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAACCTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
CDS TCA 72 bp CCTGCCCAGACTTCTCCATCTCGTCCAAGAAGCTCATaGTGCTTTGTAGCTTGGCCTCCGATAGCAGCGTCC +
Preference number: 6 (lower is better)
Translates to: PAQTSPSRPRSS*CFVAWPPIAAS
Trigger: GGACGCTGCTATCGGAGGCCAAGCTACAAAGCATCATGAGCTTCTTGGACGAGATGGAGAAGTCTGGGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS GCA 72 bp GCGGTTGTGCACCATGGTGGTGACGCAGTTGCCCACTaGTCCCTTGTTGCTCCTGTTGTTAGCAGTGAAGTT +
Preference number: 6 (lower is better)
Translates to: AVVHHGGDAVAH*SLVAPVVSSEV
Trigger: AACTTCACTGCTAACAACAGGAGCAACAAGGGAGCAGTGGGCAACTGCGTCACCACCATGGTGCACAACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CCA 72 bp TTCCAAATTTCTCCAAGTTGTCAGCTGTCAGAGAGCTaGCGTCATCCTCCTCGCTGGCCCAGGCGTATCTGC +
Preference number: 6 (lower is better)
Translates to: FQISPSCQLSES*RHPPRWPRRIC
Trigger: GCAGATACGCCTGGGCCAGCGAGGAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7
CDS CAA 90 bp TCAGGAGGTTCGGGGAACGCACTGAGTTTTCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTGGCGTCATCCTCCGTGGTCACCTCG +
Preference number: 6 (lower is better)
Translates to: SGGSGNALSFPNFSK*SAVRELASSSVVTS
Trigger: CGAGGTGACCACGGAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAACCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269392.8
ENST00000575907.5
CDS CAA 72 bp TCCATCTCGTCCAAGAAGCTCATGATGCTTTGTAGCTaGGCCTCCGATAGCAGCGTCCCATCCTCAGGAGGT +
Preference number: 6 (lower is better)
Translates to: SISSKKLMMLCS*ASDSSVPSSGG
Trigger: ACCTCCTGAGGATGGGACGCTGCTATCGGAGGCCAAGCTACAAAGCATCATGAGCTTCTTGGACGAGATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS TCA 72 bp GCAGCGTCCCATCCTCAGGAGGTTCGGGGAACGCACTaGGTTTTCCAAATTTCTCCAAGTTGTCAGCTGTCA +
Preference number: 6 (lower is better)
Translates to: AASHPQEVRGTH*VFQISPSCQLS
Trigger: TGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGAACCTCCTGAGGATGGGACGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000269392.8
ENST00000374782.7
ENST00000450824.7
ENST00000575907.5
CDS CAA 72 bp TCGGGGAACGCACTGAGTTTTCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTGGCGTCATCCTCCGTG +
Preference number: 6 (lower is better)
Translates to: SGNALSFPNFSK*SAVRELASSSV
Trigger: CACGGAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000269392.8
ENST00000575907.5
CDS CAA 72 bp TCGGGGAACGCACTGAGTTTTCCAAATTTCTCCAAGTaGTCAGCTGTCAGAGAGCTGGCGTCATCCTCCTCG +
Preference number: 6 (lower is better)
Translates to: SGNALSFPNFSK*SAVRELASSSS
Trigger: CGAGGAGGATGACGCCAGCTCTCTGACAGCTGACAACTTGGAGAAATTTGGAAAACTCAGTGCGTTCCCCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374782.7
ENST00000450824.7