RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP128 (Homo sapiens)

Ensembl gene IDs: ENSG00000100629

Ensembl transcript IDs: ENST00000216517.10, ENST00000281129.7, ENST00000553717.1, ENST00000554298.5, ENST00000554368.1, ENST00000554502.5, ENST00000554728.1, ENST00000554827.5, ENST00000555265.6, ENST00000555529.5, ENST00000556042.5, ENST00000556061.5, ENST00000556800.1, ENST00000556981.5, ENST00000557377.1, ENST00000557411.5

Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGTCAGTTATTGCTTAAGCCCCCAGCATCTAATCCCACCTGGCTaGTCTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGC +
Preference number: 1 (lower is better)
Translates to: GVSYCLSPQHLIPPG*SLFPLLGCREDRHS
Trigger: GCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAGAGCAGCCAGGTGGGATTAGATGCTGGGGGCTTAAGCAATAACTGACTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR TCA 90 bp TTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTaGTGCACCATCATGGCTCCACGAGATTTAAGCAGTGTAGTGTGG +
Preference number: 1 (lower is better)
Translates to: LFPLLGCREDRHSKT*CTIMAPRDLSSVVW
Trigger: CCACACTACACTGCTTAAATCTCGTGGAGCCATGATGGTGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CCA 90 bp ATAGGCCCTGATTTAATTGGATGTCTTGATGATGATCCTGATGAATaGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGAAG +
Preference number: 1 (lower is better)
Translates to: IGPDLIGCLDDDPDE*AESWHSLLEGGGGK
Trigger: CTTCCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATCATCATCAAGACATCCAATTAAATCAGGGCCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
3UTR GCA 90 bp TGGTTCTGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTaGGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATG +
Preference number: 1 (lower is better)
Translates to: WFCTWCHLGDAEENF*EPCIWNIFHQFSQM
Trigger: CATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACAGAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTaGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGAATCCT +
Preference number: 1 (lower is better)
Translates to: CHLGDAEENFCEPCI*NIFHQFSQMNCRNP
Trigger: AGGATTCCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR TCA 90 bp GGTAGCTGCCTAGTTATACTCCATTCACGGTTACCATATCATCCATaGTTGCTACACAACTCTAAATTAATGGAGGCATTGCAATTCCAC +
Preference number: 1 (lower is better)
Translates to: GSCLVILHSRLPYHP*LLHNSKLMEALQFH
Trigger: GTGGAATTGCAATGCCTCCATTAATTTAGAGTTGTGTAGCAATCATGGATGATATGGTAACCGTGAATGGAGTATAACTAGGCAGCTACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554827.5
3UTR TCA 90 bp TATTACAAAGGTATTGCTTTATTGCCCTTGTCTATGCAGAATCCATaGCCCAATAGGATTCAGTTCCTGAAAGTTTACTATTACTTAGCA +
Preference number: 1 (lower is better)
Translates to: YYKGIALLPLSMQNP*PNRIQFLKVYYYLA
Trigger: TGCTAAGTAATAGTAAACTTTCAGGAACTGAATCCTATTGGGTCATGGATTCTGCATAGACAAGGGCAATAAAGCAATACCTTTGTAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR GCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTTTCTCTCAGATGAACTaGAGGAATCCTGTAATCCCA +
Preference number: 2 (lower is better)
Translates to: KRMSDLTHECGNLPERFCFSQMN*RNPVIP
Trigger: TGGGATTACAGGATTCCTGCAGTTCATCTGAGAGAA...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR TCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAGACAGGAAGCGACTGTaGTCCTGCCAAGAGGATGAG +
Preference number: 2 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTDRKRL*SCQEDE
Trigger: CTCATCCTCTTGGCAGGATCACAGTCGCTTCCTGTC...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTTGCGAACCCTGTATTTaGAATATCTTCCATCAGTTC +
Preference number: 2 (lower is better)
Translates to: KRMSDLTHECGNLPERFCCEPCI*NIFHQF
Trigger: GAACTGATGGAAGATATTCCAAATACAGGGTTCGCA...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR TCA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTGGTGAGCCTCAGGACTaGATCACAGCTCGGATACAT +
Preference number: 2 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLIGEPQD*ITARIH
Trigger: ATGTATCCGAGCTGTGATTCAGTCCTGAGGCTCACC...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
3UTR-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGTGACTGACCACACTTaGAAAAGGAAAATACAAAGT +
Preference number: 2 (lower is better)
Translates to: PKTVQDMTEVITVGYLATVTDHT*KRKIQS
Trigger: ACTTTGTATTTTCCTTTTTCAAGTGTGGTCAGTCAC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACTGAATCTAAAGTGCTaGCAACTTTTGCCTCAAGGG +
Preference number: 2 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITLNLKC*QLLPQG
Trigger: CCCTTGAGGCAAAAGTTGCCAGCACTTTAGATTCAG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATACGGTATGCAGTTGTaGACTGTTAAGATGATAGAT +
Preference number: 2 (lower is better)
Translates to: PKTVQDMTEVITVGYLATYGMQL*TVKMID
Trigger: ATCTATCATCTTAACAGTCCACAACTGCATACCGTA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACATTTAGGAGGCCAAGGTaGGAGGATAGCTCTAGTCCA +
Preference number: 2 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTFRRPR*EDSSSP
Trigger: TGGACTAGAGCTATCCTCCCACCTTGGCCTCCTAAA...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CAA 90 bp GGTTCTGTCACCTTTGAAACTTTTGGTTCTGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATA +
Preference number: 2 (lower is better)
Translates to: GSVTFETFGSVLGVI*VMLKRISANPVFGI
Trigger: TATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACAGAACCAAAAGTTTCAAAGGTGACAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACATCTAACCCACGAGTGTaGGAACCTTCCAGAAAGGTT +
Preference number: 2 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTSNPRV*EPSRKV
Trigger: AACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGA...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACACTTTGTTCCCTCTCTTaGGTTGCAGAGAAGATAGGC +
Preference number: 2 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTLCSLS*VAEKIG
Trigger: GCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR CCA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTGAATGGGCAGAGTCCTaGCATAGTCTGTTAGAAGGA +
Preference number: 2 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLIEWAES*HSLLEG
Trigger: TCCTTCTAACAGACTATGCCAGGACTCTGCCCATTC...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
3UTR CAA 90 bp TTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTaGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGT +
Preference number: 2 (lower is better)
Translates to: FGLVYHSQGPTVLSL*SMFGNTKEPKLQVC
Trigger: ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR TCA 90 bp TTACTAAGACAGAAGCAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTAGAGGAATGCTGTGGCTaGAGAATTTTCTCTTCTCGT +
Preference number: 2 (lower is better)
Translates to: LLRQKQYVLSINSCTQPVEECCG*RIFSSR
Trigger: ACGAGAAGAGAAAATTCTTCAGCCACAGCATTCCTC...TACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTGCTTCTGTCTTAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
3UTR-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAGTGCTGGCAACTTTTaGCTCAAGGGAAACTCATTT +
Preference number: 2 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISAGNF*LKGNSF
Trigger: AAATGAGTTTCCCTTGAGGCAAAAGTTGCCAGCACT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTTGGTTGGGAAAATGTaGCTGACCACACTTGAAAAA +
Preference number: 2 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVILVGKM*LTTLEK
Trigger: TTTTTCAAGTGTGGTCAGTCACATTTTCCCAACCAA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR CAA 90 bp CTGATATTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATaGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTG +
Preference number: 2 (lower is better)
Translates to: LILFGLVYHSQGPTV*SLLSMFGNTKEPKL
Trigger: CAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAATATCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAACTTTTGTCAATGTTTaGCAATACCAAAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITTFVNV*QYQRAK
Trigger: TTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR TCA 90 bp CAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTAAATGCAGTTATCATATTCTCGTCCCAGAAATaGAGAAAGATAAGAAGACAA +
Preference number: 2 (lower is better)
Translates to: QYVLSINSCTQPVNAVIIFSSQK*RKIRRQ
Trigger: TTGTCTTCTTATCTTTCTTCATTTCTGGGACGAGAA...TATGATAACTGCATTTACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
3UTR-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAATCCAAATTTTGGTTaGGAAAATGTGACTGACCAC +
Preference number: 2 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYNPNFG*ENVTDH
Trigger: GTGGTCAGTCACATTTTCCCAACCAAAATTTGGATT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATACTTTTGTCAATGTTTaGCAATACCAAAGAGCCAAA +
Preference number: 2 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYTFVNV*QYQRAK
Trigger: TTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CAA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCAAGCAGTGTAGTGTGGTaGACAGCAGCCTTCCAGCCT +
Preference number: 3 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDASSVVW*TAAFQP
Trigger: AGGCTGGAAGGCTGCTGTCAACCACACTACACTGCT...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR GCA 72 bp TATTGCTTAAGCCCCCAGCATCTAATCCCACCTGGCTaGTCTTTGTTCCCTCTCTTGGGTTGCAGAGAAGAT +
Preference number: 3 (lower is better)
Translates to: YCLSPQHLIPPG*SLFPLLGCRED
Trigger: ATCTTCTCTGCAACCCAAGAGAGGGAACAAAGAGCAGCCAGGTGGGATTAGATGCTGGGGGCTTAAGCAATA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CCA 72 bp TCAAGCATCTTTGGAAATGGCTTTAAGACCTCCACTTaGGTGAGCCTCAGGACTGAATCACAGCTCGGATAC +
Preference number: 3 (lower is better)
Translates to: SSIFGNGFKTST*VSLRTESQLGY
Trigger: GTATCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATTTCCAAAGATGCTTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
3UTR TCA 72 bp CTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTaGTGCACCATCATGGCTCCACGAGATTTAAGCAGT +
Preference number: 3 (lower is better)
Translates to: LLGCREDRHSKT*CTIMAPRDLSS
Trigger: ACTGCTTAAATCTCGTGGAGCCATGATGGTGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR GCA 72 bp GCACCTCCCCGTGTTATCTATACATCTAAACCACGATaGAGTCATGTCAGTCACCTGTCCCATGCATTTCTA +
Preference number: 3 (lower is better)
Translates to: APPRVIYTSKPR*SHVSHLSHAFL
Trigger: TAGAAATGCATGGGACAGGTGACTGACATGACTGCATCGTGGTTTAGATGTATAGATAACACGGGGAGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CCA 72 bp GGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTaGAATATCTTCCATCAGTTCTCTCAGATGAACTGC +
Preference number: 3 (lower is better)
Translates to: GDAEENFCEPCI*NIFHQFSQMNC
Trigger: GCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CCA 72 bp GATTTAATTGGATGTCTTGATGATGATCCTGATGAATaGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGA +
Preference number: 3 (lower is better)
Translates to: DLIGCLDDDPDE*AESWHSLLEGG
Trigger: TCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATCATCATCAAGACATCCAATTAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
3UTR-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAACAGTATTGTCACTTTaGTCAATGTTTGGCAATACC +
Preference number: 3 (lower is better)
Translates to: PKTVQDMTEVITVGYLATTVLSL*SMFGNT
Trigger: GGTATTGCCAAACATTGACAAAAGTGACAATACTGT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR GCA 72 bp ACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTaGGAACCCTGTATTTGGAATATCTTCCATCAGTTC +
Preference number: 3 (lower is better)
Translates to: TWCHLGDAEENF*EPCIWNIFHQF
Trigger: GAACTGATGGAAGATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAAGCTACGGTATGCAGTaGTGGACTGTTAAGATGATA +
Preference number: 3 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITSYGMQ*WTVKMI
Trigger: TATCATCTTAACAGTCCACAACTGCATACCGTAGCT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR-3UTR CAA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACATCTTTGTTCCCTCTCTaGGGTTGCAGAGAAGATAGG +
Preference number: 3 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTSLFPL*GCREDR
Trigger: CCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAGA...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACACTTTTGTCAATGTTaGGCAATACCAAAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITHFCQC*AIPKSQ
Trigger: TTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR TCA 72 bp GGTATTGCTTTATTGCCCTTGTCTATGCAGAATCCATaGCCCAATAGGATTCAGTTCCTGAAAGTTTACTAT +
Preference number: 3 (lower is better)
Translates to: GIALLPLSMQNP*PNRIQFLKVYY
Trigger: ATAGTAAACTTTCAGGAACTGAATCCTATTGGGTCATGGATTCTGCATAGACAAGGGCAATAAAGCAATACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR CCA 72 bp TCAGTTGTATATAAATGCTCCCTGAATCTAAAGTGCTaGCAACTTTTGCCTCAAGGGAAACTCATTTTCCTT +
Preference number: 3 (lower is better)
Translates to: SVVYKCSLNLKC*QLLPQGKLIFL
Trigger: AAGGAAAATGAGTTTCCCTTGAGGCAAAAGTTGCCAGCACTTTAGATTCAGGGAGCATTTATATACAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR TCA 72 bp CTAGTTATACTCCATTCACGGTTACCATATCATCCATaGTTGCTACACAACTCTAAATTAATGGAGGCATTG +
Preference number: 3 (lower is better)
Translates to: LVILHSRLPYHP*LLHNSKLMEAL
Trigger: CAATGCCTCCATTAATTTAGAGTTGTGTAGCAATCATGGATGATATGGTAACCGTGAATGGAGTATAACTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554827.5
3UTR-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCACTTTTGTCAATGTTaGGCAATACCAAAGAGCCAA +
Preference number: 3 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYHFCQC*AIPKSQ
Trigger: TTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR TCA 72 bp CACAACTTCACTTACAAAAACAGATACAGGGAGGATTaGTACATATCTATTTCCAAATGTGTCATCCATGTT +
Preference number: 3 (lower is better)
Translates to: HNFTYKNRYRED*YISISKCVIHV
Trigger: AACATGGATGACACATTTGGAAATAGATATGTATCAATCCTCCCTGTATCTGTTTTTGTAAGTGAAGTTGTG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGTGCCAAGAGGATGAGTaGTCTAACCCACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGCQEDE*SNPRVW
Trigger: CCACACTCGTGGGTTAGATCACTCATCCTCTTGGCA...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGAGACAGGAAGCGACTGTaGTCCTGCCAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGDRKRL*SCQEDE
Trigger: CTCATCCTCTTGGCAGGATCACAGTCGCTTCCTGTC...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGAAGACCTCCACTTGGGTaGGCCTCAGGACTGAATCAC +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGRPPLG*ASGLNH
Trigger: GTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCT...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGAGGCACAGACTCCAGATaGTCCAAGGCCACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGGTDSR*SKATWV
Trigger: TACCCAAGTGGCCTTGGACCATCTGGAGTCTGTGCC...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAACTGCTGGAGCTCACTaGGGTACCGCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATTAGAH*GTAQPA
Trigger: AGCAGGCTGAGCGGTACCTCAGTGAGCTCCAGCAGT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTAGGTACCGCTCAGCCTaGTTGGTTGCATCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCRYRSA*LVASSA
Trigger: TGCGGAGGATGCAACCAAGCAGGCTGAGCGGTACCT...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCACTCAGCCTGCTTGGTTaGATCCTCCGCATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDALSLLG*ILRMAS
Trigger: ACTCGCCATGCGGAGGATGCAACCAAGCAGGCTGAG...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAACCGCTCAGCCTGCTTaGTTGCATCCTCCGCATGGC +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRTAQPA*LHPPHG
Trigger: GCCATGCGGAGGATGCAACCAAGCAGGCTGAGCGGT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGTTTAAGACCTCCACTTaGGTGAGCCTCAGGACTGAA +
Preference number: 4 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGFKTST*VSLRTE
Trigger: TTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAA...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CCA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGGAATGGGCAGAGTCCTaGCATAGTCTGTTAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGEWAES*HSLLEG
Trigger: TCCTTCTAACAGACTATGCCAGGACTCTGCCCATTC...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGTAGCTGCAGGGACATaGGTCCCAGTTGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNVAAGT*VPVDPG
Trigger: GCCAGGATCAACTGGGACTCATGTCCCTGCAGCTAC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTGTCAGCTCTGAGATCTaGAGGTCAGCATGCTTACGC +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCVSSEI*RSACLR
Trigger: GCGTAAGCATGCTGACCTTCAGATCTCAGAGCTGAC...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCACTCTTTCAGAGCCTCTaGCTGCTGGAGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDALFQSL*LLELTE
Trigger: CTCAGTGAGCTCCAGCAGTCAGAGGCTCTGAAAGAG...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACTTCGAGTTCCCCTGTaGGTTGATCTGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATLRVPL*VDLAAH
Trigger: ATGGGCTGCCAGATCAACGCACAGGGGAACTCGAAG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAAGGTACCGCTCAGCCTaGTTGGTTGCATCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRRYRSA*LVASSA
Trigger: TGCGGAGGATGCAACCAAGCAGGCTGAGCGGTACCT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGTTGCATCCTCCGCATaGCGAGTCAGCTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATVASSA*RVSSEI
Trigger: GATCTCAGAGCTGACTCGCCATGCGGAGGATGCAAC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCAGCTTTGTCCTGGGCCTaGCTCTTCTTGAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDAALSWA*LFLSSA
Trigger: TGCAGAGCTCAAGAAGAGCCAGGCCCAGGACAAAGC...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGATGGTCCAAGGCCACTTaGGTACTCGTTTCTAATGCA +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGWSKAT*VLVSNA
Trigger: TGCATTAGAAACGAGTACCCAAGTGGCCTTGGACCA...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGGCACAGACTCCAGATaGTCCAAGGCCACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATGTDSR*SKATWV
Trigger: TACCCAAGTGGCCTTGGACCATCTGGAGTCTGTGCC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGATCTAACCCACGAGTGTaGGAACCTTCCAGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGSNPRV*EPSRKV
Trigger: AACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGA...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGAGATGATCCTGATGAATaGGCAGAGTCCTGGCATAGT +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGDDPDE*AESWHS
Trigger: ACTATGCCAGGACTCTGCCCATTCATCAGGATCATC...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGAGGTAGGTGGAAAATaGTGGAGCTCTGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATEVGGK*WSSDPV
Trigger: CACTGGGTCAGAGCTCCATCATTTTCCACCTACCTC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGACATGAGTCCCAGTTaGTCCTGGCGTCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNDMSPS*SWRLST
Trigger: GGTGGAAAGACGCCAGGATCAACTGGGACTCATGTC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAACTGCTGGAGCTCACTaGGGTACCGCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITTAGAH*GTAQPA
Trigger: AGCAGGCTGAGCGGTACCTCAGTGAGCTCCAGCAGT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCACTGCTGGAGCTCACTaGGGTACCGCTCAGCCTGCT +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNITAGAH*GTAQPA
Trigger: AGCAGGCTGAGCGGTACCTCAGTGAGCTCCAGCAGT...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCATGCCAAGAGGATGAGTaGTCTAACCCACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDACQEDE*SNPRVW
Trigger: CCACACTCGTGGGTTAGATCACTCATCCTCTTGGCA...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGGACAGGAAGCGACTGTaGTCCTGCCAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRDRKRL*SCQEDE
Trigger: CTCATCCTCTTGGCAGGATCACAGTCGCTTCCTGTC...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACAGTGCCTCCTGTAGCTaGAGGGACATGAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNSASCS*RDMSPS
Trigger: ACTGGGACTCATGTCCCTGCAGCTACAGGAGGCACT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACGACTCAACCGACTGTaGTCTCCCCAGACTCGCAGC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITRLNRL*SPQTRS
Trigger: GCTGCGAGTCTGGGGAGAGCACAGTCGGTTGAGTCG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555265.6
CDS-3UTR GCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTCTAATCCCACCTGGCTaGTCTTTGTTCCCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCLIPPG*SLFPLL
Trigger: CAAGAGAGGGAACAAAGAGCAGCCAGGTGGGATTAG...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTTTTAGGAGGCCAAGGTaGGAGGATAGCTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCFRRPR*EDSSSP
Trigger: TGGACTAGAGCTATCCTCCCACCTTGGCCTCCTAAA...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTGCATCTAATCCCACCTaGCTGCTCTTTGTTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCASNPT*LLFVPS
Trigger: AGAGGGAACAAAGAGCAGCCAGGTGGGATTAGATGC...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CAA 72 bp TGGCTGGAGTGTAGAAACAGAAAATGGAGTCAGTTATaGCTTAAGCCCCCAGCATCTAATCCCACCTGGCTG +
Preference number: 4 (lower is better)
Translates to: WLECRNRKWSQL*LKPPASNPTWL
Trigger: CAGCCAGGTGGGATTAGATGCTGGGGGCTTAAGCAATAACTGACTCCATTTTCTGTTTCTACACTCCAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAGAGGTAGGTGGAAAATaGTGGAGCTCTGACCCAGTG +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVREVGGK*WSSDPV
Trigger: CACTGGGTCAGAGCTCCATCATTTTCCACCTACCTC...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCCGCTCCACCCGATCTaGAACCACTTCTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNPLHPI*NHFLFL
Trigger: CAGAAACAAGAAGTGGTTTCAGATCGGGTGGAGCGG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGCTGCAGGGACATaGGTCCCAGTTGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITVAAGT*VPVDPG
Trigger: GCCAGGATCAACTGGGACTCATGTCCCTGCAGCTAC...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTCTGCACTCTCAAATCTaGCATTTGCTTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCLHSQI*HLLLQV
Trigger: GACCTGGAGAAGCAAATGTCAGATTTGAGAGTGCAG...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCAGATGCCATTGCGCTaGAGTTCAGCTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNQMPLR*SSAALS
Trigger: TGAGAGTGCAGCTGAACTTCAGCGCAATGGCATCTG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGAATCAGTTCTCTCAGATaGACTGCAGGAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGISSLR*TAGISE
Trigger: TTCAGAGATTCCTGCAGTTCATCTGAGAGAACTGAT...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCCAGCTCCCTTTCTGTaGGCATCTCTCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNPAPFL*ASLSPV
Trigger: AACTGGAGAGAGAGATGCGCACAGAAAGGGAGCTGG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATTCAGCTCCCTCTGGTaGACATCTCGTTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATFSSLW*TSRSSF
Trigger: AAAGCTGGAACGAGATGTGCACCAGAGGGAGCTGAA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATATCGTCCAAGCATCTaGTCCACTTGTCGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATYRPSI*STCRRF
Trigger: GAACCTGCGACAAGTGGACCAGATGCTTGGACGATA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTGTTGCATCCTCCGCATaGCGAGTCAGCTCTGAGATC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIVASSA*RVSSEI
Trigger: GATCTCAGAGCTGACTCGCCATGCGGAGGATGCAAC...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTGTAATTTCTCCTCCTTaGAGTGAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCVISPP*SEAPPP
Trigger: AGGAGGAGGAGCTTCACTCCAAGGAGGAGAAATTAC...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAAGTTTAGCTTTGTCCTaGGCCTGGCTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATSLALS*AWLFLS
Trigger: GCTCAAGAAGAGCCAGGCCCAGGACAAAGCTAAACT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCAAGTTTAGCTTTGTCCTaGGCCTGGCTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDASLALS*AWLFLS
Trigger: GCTCAAGAAGAGCCAGGCCCAGGACAAAGCTAAACT...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAGTTCCCCTGTGCGTTaGTCTGGCAGCCCATGGACT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISSPVR*SGSPWT
Trigger: AGTCCATGGGCTGCCAGATCAACGCACAGGGGAACT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGACATGAGTCCCAGTTaGTCCTGGCGTCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITDMSPS*SWRLST
Trigger: GGTGGAAAGACGCCAGGATCAACTGGGACTCATGTC...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACTGCACTCTCAAATCTaGCATTTGCTTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATLHSQI*HLLLQV
Trigger: GACCTGGAGAAGCAAATGTCAGATTTGAGAGTGCAG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTCAGATGCCATTGCGCTaGAGTTCAGCTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIQMPLR*SSAALS
Trigger: TGAGAGTGCAGCTGAACTTCAGCGCAATGGCATCTG...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACTCTTTCAGAGCCTCTaGCTGCTGGAGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITLFQSL*LLELTE
Trigger: CTCAGTGAGCTCCAGCAGTCAGAGGCTCTGAAAGAG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGTGGCACTCAGGTCCTTaGTGGACTCTTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRWHSGP*WTLASQ
Trigger: TTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCA...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACAGTCTGTCACACTGTaGTTTCAACTTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATQSVTL*FQLLQL
Trigger: CAGCTGGAGAAGTTGAAATCACAGTGTGACAGACTG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTAAAGAAGTTGATCCTTaGGCTGCAATCTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCKEVDP*AAIWPL
Trigger: AAGAGGCCAGATTGCAGCTCAAGGATCAACTTCTTT...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTTCCTCACAGAGCCACTaGAGTTTAGTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCSSQSH*SLVLLS
Trigger: AGAAAGCAAGACTAAACTTCAGTGGCTCTGTGAGGA...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCCAGAAGGTGCAACTaGCCAAACGCAGCGACTCAA +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPRRCN*PNAATQ
Trigger: TTGAGTCGCTGCGTTTGGTCAGTTGCACCTTCTGGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACCGATGATCTTTGGTTaGCCCTACACTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATPMIFG*PYTFPK
Trigger: TTTGGGGAAAGTGTAGGGGCAACCAAAGATCATCGG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGGAGCTCTGACCCAGTaGCACCATCAAGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCGALTQ*HHQGHL
Trigger: CAAGTGACCTTGATGGTGGCACTGGGTCAGAGCTCC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTAGTGCCTCCTGTAGCTaGAGGGACATGAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCSASCS*RDMSPS
Trigger: ACTGGGACTCATGTCCCTGCAGCTACAGGAGGCACT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAAGTGCCTCCTGTAGCTaGAGGGACATGAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITSASCS*RDMSPS
Trigger: ACTGGGACTCATGTCCCTGCAGCTACAGGAGGCACT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAGGTACCGCTCAGCCTaGTTGGTTGCATCCTCCGCA +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIRYRSA*LVASSA
Trigger: TGCGGAGGATGCAACCAAGCAGGCTGAGCGGTACCT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCATTCATCCCTGGATTTTaGCTGTGCAGTGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDAFIPGF*LCSEVR
Trigger: TCTGACCTCACTGCACAGGCAAAATCCAGGGATGAA...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCCTGTGCGTTGATCTaGCAGCCCATGGACTCAATC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPCALI*QPMDSI
Trigger: GATTGAGTCCATGGGCTGCCAGATCAACGCACAGGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAACCGCTCAGCCTGCTTaGTTGCATCCTCCGCATGGC +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTTAQPA*LHPPHG
Trigger: GCCATGCGGAGGATGCAACCAAGCAGGCTGAGCGGT...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGCTTTGTCCTGGGCCTaGCTCTTCTTGAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITALSWA*LFLSSA
Trigger: TGCAGAGCTCAAGAAGAGCCAGGCCCAGGACAAAGC...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATGGTCCAAGGCCACTTaGGTACTCGTTTCTAATGCA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATWSKAT*VLVSNA
Trigger: TGCATTAGAAACGAGTACCCAAGTGGCCTTGGACCA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCGCTCCACCCGATCTaGAACCACTTCTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPLHPI*NHFLFL
Trigger: CAGAAACAAGAAGTGGTTTCAGATCGGGTGGAGCGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACCGCTCCACCCGATCTaGAACCACTTCTTGTTTCTG +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITPLHPI*NHFLFL
Trigger: CAGAAACAAGAAGTGGTTTCAGATCGGGTGGAGCGG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCGCAGTTCTTCTACCTaGTGCAAAAGTGTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNRSSST*CKSVSR
Trigger: CCGAGAAACACTTTTGCATCAGGTAGAAGAACTGCG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCTGCACTCTCAAATCTaGCATTTGCTTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNLHSQI*HLLLQV
Trigger: GACCTGGAGAAGCAAATGTCAGATTTGAGAGTGCAG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGTCAGCTCTGAGATCTaGAGGTCAGCATGCTTACGC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCVSSEI*RSACLR
Trigger: GCGTAAGCATGCTGACCTTCAGATCTCAGAGCTGAC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTCAGCCTTCAGAGTCCTaGTATGATTCTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIQPSES*YDSQPH
Trigger: GTGAGGCTGAGAATCATATCAGGACTCTGAAGGCTG...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGCTGTCCTCACAGAGCCACTaGAGTTTAGTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: CTQPVNAVIIYTGGMLWLSSQSH*SLVLLS
Trigger: AGAAAGCAAGACTAAACTTCAGTGGCTCTGTGAGGA...CAGCCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTGCCAAGAGGATGAGTaGTCTAACCCACGAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCCQEDE*SNPRVW
Trigger: CCACACTCGTGGGTTAGATCACTCATCCTCTTGGCA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCGACAGGAAGCGACTGTaGTCCTGCCAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIDRKRL*SCQEDE
Trigger: CTCATCCTCTTGGCAGGATCACAGTCGCTTCCTGTC...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTACCCTAGTTCACGTATaGAAATCTTGGACTAGACAG +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCTLVHV*KSWTRQ
Trigger: CTGTCTAGTCCAAGATTTTCATACGTGAACTAGGGT...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCAGCTCCCTTTCTGTaGGCATCTCTCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPAPFL*ASLSPV
Trigger: AACTGGAGAGAGAGATGCGCACAGAAAGGGAGCTGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTCTTTCGATCACCTTCTaGTTTCGTAAGTTGTGTACG +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCLSITF*FRKLCT
Trigger: CGTACACAACTTACGAAAGCAGAAGGTGATCGAAAG...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATCCAACATCTGCAGTTaGTGTTTTTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATSNICS*CFSPFS
Trigger: GGAGAATGGGGAAAAACAGCAACTGCAGATGTTGGA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAAAGGTCCTTAAGCACTaGTTTCTTGGCTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATKVLKH*FLGSLF
Trigger: GAAGAGAGAGCCAAGAAAGCAGTGCTTAAGGACCTT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTATTTCATCCAGAAGCTaGTCCTGCCTTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCISSRS*SCLSIC
Trigger: ACAGATAGAAAGGCAGGAGCAGCTTCTGGATGAAAT...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAGTCGCAGGTTCCGACTaGTATCCTGTAAAGTACTTG +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRVAGSD*YPVKYL
Trigger: CAAGTACTTTACAGGATACCAGTCGGAACCTGCGAC...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATCGCTCTCCAGTCTATaGATGGTATCCAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRSLSSL*MVSREF
Trigger: GAATTCCCTGGATACCATCCATAGACTGGAGAGCGA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCGCTTTGTCCTGGGCCTaGCTCTTCTTGAGCTCTGCA +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIALSWA*LFLSSA
Trigger: TGCAGAGCTCAAGAAGAGCCAGGCCCAGGACAAAGC...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTCTATCACACCAAGAATaGATTCCTGTTCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCLSHQE*IPVQSP
Trigger: TGGAGACTGAACAGGAATCCATTCTTGGTGTGATAG...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATCTAACCCACGAGTGTaGGAACCTTCCAGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRSNPRV*EPSRKV
Trigger: AACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGTCTAACCCACGAGTGTaGGAACCTTCCAGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRSNPRV*EPSRKV
Trigger: AACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGA...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTTCACTTGGCACTGGCTaGAGTGTAGAAACAGAAAAT +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCSLGTG*SVETEN
Trigger: ATTTTCTGTTTCTACACTCCAGCCAGTGCCAAGTGA...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTCCAAAGGCACATTGTTaGCATTCCTATCACGTCAAA +
Preference number: 4 (lower is better)
Translates to: KRMSDLTHECGNLPERFCPKAHC*HSYHVK
Trigger: TTTGACGTGATAGGAATGCCAACAATGTGCCTTTGG...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCTATCATTTCTTCATaGGGTTCAGGGCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPIISS*GSGQRA
Trigger: GGCCCTTTGCCCTGAACCTCATGAAGAAATGATAGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATCACGACAGCGGAAGTaGTCTGATTCGCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITSRQRK*SDSLDD
Trigger: ATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACCGGAGTTGGTCGATTaGTTGTTCCAAGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRPELVD*LFQAFF
Trigger: AAAGAAAGCTTGGAACAATCAATCGACCAACTCCGG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACATAGTCCTTGAGAGGTaGGGTAGGTGGAAAATGATG +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNIVLER*GRWKMM
Trigger: CATCATTTTCCACCTACCTCACCTCTCAAGGACTAT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCCGGACACCAGTTCTTaGTCTCATTCGTTTAATACC +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNPDTSS*SHSFNT
Trigger: GGTATTAAACGAATGAGATCAAGAACTGGTGTCCGG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAATATCATCAGTCTCTTaGACAAACCGGACACCAGTT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATISSVS*TNRTPV
Trigger: AACTGGTGTCCGGTTTGTTCAAGAGACTGATGATAT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGAATTTGTTCACTGCTaGGGTCTCGAAGAGACTGAT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNEFVHC*GLEETD
Trigger: ATCAGTCTCTTCGAGACCTCAGCAGTGAACAAATTC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAGTAGCTGCAGGGACATaGGTCCCAGTTGATCCTGGC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSVAAGT*VPVDPG
Trigger: GCCAGGATCAACTGGGACTCATGTCCCTGCAGCTAC...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACGGCTGCCTTCTGATTaGTTCAATAACCTTCGAGAT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRRLPSD*FNNLRD
Trigger: ATCTCGAAGGTTATTGAATCAATCAGAAGGCAGCCG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCGGCTGCCTTCTGATTaGTTCAATAACCTTCGAGAT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNRLPSD*FNNLRD
Trigger: ATCTCGAAGGTTATTGAATCAATCAGAAGGCAGCCG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCAGATGCCATTGCGCTaGAGTTCAGCTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIQMPLR*SSAALS
Trigger: TGAGAGTGCAGCTGAACTTCAGCGCAATGGCATCTG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCGTCAGCTCTGAGATCTaGAGGTCAGCATGCTTACGC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIVSSEI*RSACLR
Trigger: GCGTAAGCATGCTGACCTTCAGATCTCAGAGCTGAC...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCAGCCTTCAGAGTCCTaGTATGATTCTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCQPSES*YDSQPH
Trigger: GTGAGGCTGAGAATCATATCAGGACTCTGAAGGCTG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACAGCCTTCAGAGTCCTaGTATGATTCTCAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITQPSES*YDSQPH
Trigger: GTGAGGCTGAGAATCATATCAGGACTCTGAAGGCTG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATTTCAGTCAAATTCCTaGGTTGTTGTCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATFQSNS*VVVCRA
Trigger: TGCTCTGCAGACAACAACTCAGGAATTTGACTGAAA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCATGCCTTTCTATCTGTTaGAAGAGACACTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDACLSIC*KRHCNS
Trigger: TGAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCA...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TCCTGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGTGCCTTTCTATCTGTTaGAAGAGACACTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: SCTQPVNAVIIYTGGMLWCLSIC*KRHCNS
Trigger: TGAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCA...CCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATCTATGCAGAATCCATaGCCCAATAGGATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATSMQNP*PNRIQF
Trigger: GAACTGAATCCTATTGGGTCATGGATTCTGCATAGA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACAGTCACCTCTACTTGTaGTGCCAAATGTGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNSHLYL*CQMCFL
Trigger: GAGAAAGCACATTTGGCATCACAAGTAGAGGTGACT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCATTCCATATTTACTCATaGAATCCACCCCCAACTTCC +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDAFHIYS*NPPPTS
Trigger: GGAAGTTGGGGGTGGATTTCATGAGTAAATATGGAA...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCCAAAACTCCGAGTTaGTCTTCTCTGAGCTCAACG +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPKTPS*SSLSST
Trigger: CGTTGAGCTCAGAGAAGAGCAACTCGGAGTTTTGGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCCAGCTCCCTTTCTGTaGGCATCTCTCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIPAPFL*ASLSPV
Trigger: AACTGGAGAGAGAGATGCGCACAGAAAGGGAGCTGG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACCCCTCATGCTCATCTaGTTTAGCTTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATPLMLI*FSFLFL
Trigger: AAGAAACAAGAAGCTAAAGCAGATGAGCATGAGGGG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGCGCTGAAGTTCAGCTaGACTCTCAAATCTGACATT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNALKFS*TLKSDI
Trigger: AATGTCAGATTTGAGAGTGCAGCTGAACTTCAGCGC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATGTCTTTTCTCTCCATaGACCGTTTCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATCLFSP*TVSLPL
Trigger: TAGAGGAAGTGAAACGGTGCATGGAGAGAAAAGACA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCACTCAGCCTGCTTGGTTaGATCCTCCGCATGGCGAGT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLSLLG*ILRMAS
Trigger: ACTCGCCATGCGGAGGATGCAACCAAGCAGGCTGAG...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTCAGCTCCCTCTGGTaGACATCTCGTTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCFSSLW*TSRSSF
Trigger: AAAGCTGGAACGAGATGTGCACCAGAGGGAGCTGAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACTGCAATTCCACCTCATaGAGAACAACTAGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNCNSTS*RTTRGL
Trigger: CAGACCTCTAGTTGTTCTGCATGAGGTGGAATTGCA...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCAAGCCGATGATCTTTaGTTGCCCCTACACTTTCCC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCQADDL*LPLHFP
Trigger: GGGAAAGTGTAGGGGCAACCAAAGATCATCGGCTTG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACTCGTTTAATACCCTGTaGATCCCCATAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNSFNTL*IPIVLE
Trigger: CTCAAGGACTATGGGGATCCACAGGGTATTAAACGA...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CCA 90 bp TGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGCTGTCTCCACTGAGTCCTTaGAGAATGTTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: CTQPVNAVIIYTGGMLWLSPLSP*RMFYKL
Trigger: CAGCTTGTAAAACATTCTCCAAGGACTCAGTGGAGA...CAGCCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAGGCACAGACTCCAGATaGTCCAAGGCCACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTGTDSR*SKATWV
Trigger: TACCCAAGTGGCCTTGGACCATCTGGAGTCTGTGCC...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACTGAATCTAAAGTGCTaGCAACTTTTGCCTCAAGGG +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRLNLKC*QLLPQG
Trigger: CCCTTGAGGCAAAAGTTGCCAGCACTTTAGATTCAG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TCCTGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGACAGGAGGAATGCTGTaGCTGAAGAATTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SCTQPVNAVIIYTGGMLWTGGML*LKNFLF
Trigger: GAAGAGAAAATTCTTCAGCCACAGCATTCCTCCTGT...CCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR CCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTCTTTGTTCCCTCTCTTaGGTTGCAGAGAAGATAGGC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCILCSLS*VAEKIG
Trigger: GCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCCTATCATTTCTTCATaGGGTTCAGGGCAAAGGGCC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIPIISS*GSGQRA
Trigger: GGCCCTTTGCCCTGAACCTCATGAAGAAATGATAGG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACATATCATCAGTCTCTTaGACAAACCGGACACCAGTT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNISSVS*TNRTPV
Trigger: AACTGGTGTCCGGTTTGTTCAAGAGACTGATGATAT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATGACATGAGTCCCAGTTaGTCCTGGCGTCTTTCCACC +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYDMSPS*SWRLST
Trigger: GGTGGAAAGACGCCAGGATCAACTGGGACTCATGTC...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACTGCACTCTCAAATCTaGCATTTGCTTCTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITLHSQI*HLLLQV
Trigger: GACCTGGAGAAGCAAATGTCAGATTTGAGAGTGCAG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATCACATGTGTCAAAGTaGTTCTGGATCTCCTTAAGT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATSHVSK*FWISLS
Trigger: ACTTAAGGAGATCCAGAATCACTTTGACACATGTGA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCATCACATGTGTCAAAGTaGTTCTGGATCTCCTTAAGT +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDASHVSK*FWISLS
Trigger: ACTTAAGGAGATCCAGAATCACTTTGACACATGTGA...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCACTCTTTCAGAGCCTCTaGCTGCTGGAGCTCACTGAG +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLFQSL*LLELTE
Trigger: CTCAGTGAGCTCCAGCAGTCAGAGGCTCTGAAAGAG...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATTCAGAGTCCTGATATaGTTCTCAGCCTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRFRVLI*FSASLF
Trigger: AAAGAGTGAGGCTGAGAATCATATCAGGACTCTGAA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCCAGTCTGTCACACTGTaGTTTCAACTTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNIQSVTL*FQLLQL
Trigger: CAGCTGGAGAAGTTGAAATCACAGTGTGACAGACTG...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAATCAGTTCTCTCAGATaGACTGCAGGAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRISSLR*TAGISE
Trigger: TTCAGAGATTCCTGCAGTTCATCTGAGAGAACTGAT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATGACAGGAAGCGACTGTaGTCCTGCCAAGAGGATGAG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYDRKRL*SCQEDE
Trigger: CTCATCCTCTTGGCAGGATCACAGTCGCTTCCTGTC...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACACCTCACTGTCGTCCTaGGAGAACTCTGCCCCTGAA +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYTSLSS*ENSAPE
Trigger: TTCAGGGGCAGAGTTCTCTCAGGACGACAGTGAGGT...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGGGTCCTTGCTTTGGCTaGTTTTACCAGATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRGPCFG*FYQIPF
Trigger: AAAAGGAATCTGGTAAAATCAGCCAAAGCAAGGACC...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCTTCGAGTTCCCCTGTaGGTTGATCTGGCAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYLRVPL*VDLAAH
Trigger: ATGGGCTGCCAGATCAACGCACAGGGGAACTCGAAG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAACCATCAAGGTCACTTaGACTCAAACTTGTAACAGA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATTIKVT*TQTCNR
Trigger: TCTGTTACAAGTTTGAGTGCAAGTGACCTTGATGGT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATGGAGCTCTGACCCAGTaGCACCATCAAGGTCACTTG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYGALTQ*HHQGHL
Trigger: CAAGTGACCTTGATGGTGGCACTGGGTCAGAGCTCC...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCCCCTCATGCTCATCTaGTTTAGCTTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNPLMLI*FSFLFL
Trigger: AAGAAACAAGAAGCTAAAGCAGATGAGCATGAGGGG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCTTTCGATCACCTTCTaGTTTCGTAAGTTGTGTACG +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNLSITF*FRKLCT
Trigger: CGTACACAACTTACGAAAGCAGAAGGTGATCGAAAG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGTGTCTTTTCTCTCCATaGACCGTTTCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRCLFSP*TVSLPL
Trigger: TAGAGGAAGTGAAACGGTGCATGGAGAGAAAAGACA...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACTGTCTTTTCTCTCCATaGACCGTTTCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNCLFSP*TVSLPL
Trigger: TAGAGGAAGTGAAACGGTGCATGGAGAGAAAAGACA...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATGTCTTTTCTCTCCATaGACCGTTTCACTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRCLFSP*TVSLPL
Trigger: TAGAGGAAGTGAAACGGTGCATGGAGAGAAAAGACA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATCCTTGATGGACTCTTaGATCTCAAGAAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATSLMDS*ISRSLA
Trigger: AGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTTTATTAGCAAGATCTaGTCGGATGGCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIFISKI*SDGTQV
Trigger: GACCTGAGTGCCATCCGAGCAGATCTTGCTAATAAA...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTAAGGTCCTTAAGCACTaGTTTCTTGGCTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIKVLKH*FLGSLF
Trigger: GAAGAGAGAGCCAAGAAAGCAGTGCTTAAGGACCTT...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTCATCCCTGGATTTTaGCTGTGCAGTGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCFIPGF*LCSEVR
Trigger: TCTGACCTCACTGCACAGGCAAAATCCAGGGATGAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAATTTCATCCAGAAGCTaGTCCTGCCTTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRISSRS*SCLSIC
Trigger: ACAGATAGAAAGGCAGGAGCAGCTTCTGGATGAAAT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATTTTCAGCTACGGTATaGAGTTGTGGACTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATFSATV*SCGLLR
Trigger: TCTTAACAGTCCACAACTGCATACCGTAGCTGAAAA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATATTGCCCTTGTCTATaGAGAATCCATGACCCAATA +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATYCPCL*RIHDPI
Trigger: TATTGGGTCATGGATTCTGCATAGACAAGGGCAATA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TCCTGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGCACACAGCCAGTAAATaGAGTTATCATATACACAGG +
Preference number: 4 (lower is better)
Translates to: SCTQPVNAVIIYTGGMLWHTASK*SYHIHR
Trigger: CCTGTGTATATGATAACTGCATTTACTGGCTGTGTG...CCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACAACACCTTTTCACTATaGATTCTGCCAGTTTCACCC +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNNTFSL*ILPVSP
Trigger: GGGTGAAACTGGCAGAATGCATAGTGAAAAGGTGTT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGCAGGAAATGGTAGCTaGCTAGTTATACTCCATTCA +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNAGNGS*LVILHS
Trigger: TGAATGGAGTATAACTAGGCAGCTACCATTTCCTGC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGCAGTCACCTGTCCCATaGATTTCTATTTTGATGACC +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRQSPVP*ISILMT
Trigger: GGTCATCAAAATAGAAATGCATGGGACAGGTGACTG...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTACATCTAAACCACGATaGAGTCATGTCAGTCACCTG +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCITSKPR*SHVSHL
Trigger: CAGGTGACTGACATGACTGCATCGTGGTTTAGATGT...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCAAGCCGATGATCTTTaGTTGCCCCTACACTTTCCC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIQADDL*LPLHFP
Trigger: GGGAAAGTGTAGGGGCAACCAAAGATCATCGGCTTG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCTCGCTCTCCAGTCTATaGATGGTATCCAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNISLSSL*MVSREF
Trigger: GAATTCCCTGGATACCATCCATAGACTGGAGAGCGA...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATCTCCACTGAGTCCTTaGAGAATGTTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRSPLSP*RMFYKL
Trigger: CAGCTTGTAAAACATTCTCCAAGGACTCAGTGGAGA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATGGCACAGACTCCAGATaGTCCAAGGCCACTTGGGTA +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYGTDSR*SKATWV
Trigger: TACCCAAGTGGCCTTGGACCATCTGGAGTCTGTGCC...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACCGGACACCAGTTCTTaGTCTCATTCGTTTAATACC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITPDTSS*SHSFNT
Trigger: GGTATTAAACGAATGAGATCAAGAACTGGTGTCCGG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCGGACACCAGTTCTTaGTCTCATTCGTTTAATACC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPDTSS*SHSFNT
Trigger: GGTATTAAACGAATGAGATCAAGAACTGGTGTCCGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGAATTTGTTCACTGCTaGGGTCTCGAAGAGACTGAT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITEFVHC*GLEETD
Trigger: ATCAGTCTCTTCGAGACCTCAGCAGTGAACAAATTC...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGAATTTGTTCACTGCTaGGGTCTCGAAGAGACTGAT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCEFVHC*GLEETD
Trigger: ATCAGTCTCTTCGAGACCTCAGCAGTGAACAAATTC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCGCAGTTCTTCTACCTaGTGCAAAAGTGTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIRSSST*CKSVSR
Trigger: CCGAGAAACACTTTTGCATCAGGTAGAAGAACTGCG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCAGATGCCATTGCGCTaGAGTTCAGCTGCACTCTCA +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYQMPLR*SSAALS
Trigger: TGAGAGTGCAGCTGAACTTCAGCGCAATGGCATCTG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATCACATGTGTCAAAGTaGTTCTGGATCTCCTTAAGT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRSHVSK*FWISLS
Trigger: ACTTAAGGAGATCCAGAATCACTTTGACACATGTGA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATCTGCAATGATGATGTaGGATCTTTCAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITSAMMM*DLSAPS
Trigger: AGAGGGAGCTGAAAGATCTCACATCATCATTGCAGA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTAAAGAAGTTGATCCTTaGGCTGCAATCTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCKEVDP*AAIWPL
Trigger: AAGAGGCCAGATTGCAGCTCAAGGATCAACTTCTTT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCTCCAAGCAAAGAAGTTaGTCCTTGAGCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNISKQRS*SLSCNL
Trigger: CAGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGA...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp AGGAATGCTGTGGCTGAAGAATTTTCTCTTCTCGTCCCAGAAATGAAGAAAGATTCCAAGCAAAGAAGTTaGTCCTTGAGCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: RNAVAEEFSLLVPEMKKDSKQRS*SLSCNL
Trigger: CAGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGA...ATCTTTCTTCATTTCTGGGACGAGAAGAGAAAATTCTTCAGCCACAGCATTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGGTCCAGGATATGACTaGAGTGATCACAGTAGGATA +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITGPGYD*SDHSRI
Trigger: TATCCTACTGTGATCACTTCAGTCATATCCTGGACC...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TCCTGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGTTCTCGTCCCAGAAATaGAGAAAGATAAGAAGACAA +
Preference number: 4 (lower is better)
Translates to: SCTQPVNAVIIYTGGMLWFSSQK*RKIRRQ
Trigger: TTGTCTTCTTATCTTTCTTCATTTCTGGGACGAGAA...CCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR TCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGAACAACTAGAGGTCTaGAAACCTTTATGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNEQLEV*KPLWFQ
Trigger: TTGGAACCATAAAGGTTTTCAGACCTCTAGTTGTTC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCCGATGATCTTTGGTTaGCCCTACACTTTCCCCAAA +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIPMIFG*PYTFPK
Trigger: TTTGGGGAAAGTGTAGGGGCAACCAAAGATCATCGG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCTCAAATCTGACATTTaGTTCTCCAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNLKSDI*FSRSCF
Trigger: AAAACAGGACCTGGAGAAGCAAATGTCAGATTTGAG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCGCGCTGAAGTTCAGCTaGACTCTCAAATCTGACATT +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNIALKFS*TLKSDI
Trigger: AATGTCAGATTTGAGAGTGCAGCTGAACTTCAGCGC...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGCGCTGAAGTTCAGCTaGACTCTCAAATCTGACATT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCALKFS*TLKSDI
Trigger: AATGTCAGATTTGAGAGTGCAGCTGAACTTCAGCGC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTCCAACATCTGCAGTTaGTGTTTTTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCSNICS*CFSPFS
Trigger: GGAGAATGGGGAAAAACAGCAACTGCAGATGTTGGA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACTTTGGATCTTACTCTaGTTTTTCAATTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRLWILL*FFNSLS
Trigger: GGAGAGCGAATTGAAAAAGCAGAGTAAGATCCAAAG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGTCCTTGATGGACTCTTaGATCTCAAGAAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRSLMDS*ISRSLA
Trigger: AGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGA...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTTATTAGCAAGATCTaGTCGGATGGCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCFISKI*SDGTQV
Trigger: GACCTGAGTGCCATCCGAGCAGATCTTGCTAATAAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACTTTCACTATGCATTCTaGCAGTTTCACCCGCAAAAT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNFHYAF*QFHPQN
Trigger: ATTTTGCGGGTGAAACTGGCAGAATGCATAGTGAAA...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCGTCGCAGGTTCCGACTaGTATCCTGTAAAGTACTTG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIVAGSD*YPVKYL
Trigger: CAAGTACTTTACAGGATACCAGTCGGAACCTGCGAC...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTCGTTTAATACCCTGTaGATCCCCATAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCSFNTL*IPIVLE
Trigger: CTCAAGGACTATGGGGATCCACAGGGTATTAAACGA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCGTAATTTCTCCTCCTTaGAGTGAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIVISPP*SEAPPP
Trigger: AGGAGGAGGAGCTTCACTCCAAGGAGGAGAAATTAC...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCGCTCTCCAGTCTATaGATGGTATCCAGGGAATTC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISLSSL*MVSREF
Trigger: GAATTCCCTGGATACCATCCATAGACTGGAGAGCGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATTCTCAACTTTCATCTaGCTTTGGATCTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRFSTFI*LWILLC
Trigger: GCAGAGTAAGATCCAAAGCCAGATGAAAGTTGAGAA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CTTTGTTCCCTCTCTTGGGTTGCAGAGAAGATAGGCATAGCAAAACCTGATGCATGCTTCATAAGCTCCTaGATATTCTGTTCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LCSLSWVAEKIGIAKPDACFISS*IFCSCF
Trigger: AAAACACGAACAGAATATCCAGGAGCTTATGAAGCA...TGCATCAGGTTTTGCTATGCCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATGCTTCATAAGCTCCTaGATATTCTGTTCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: PKTVQDMTEVITVGYLATCFISS*IFCSCF
Trigger: AAAACACGAACAGAATATCCAGGAGCTTATGAAGCA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCTAACCCACGAGTGTaGGAACCTTCCAGAAAGGTT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISNPRV*EPSRKV
Trigger: AACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR CAA 72 bp ACCTTTGAAACTTTTGGTTCTGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTA +
Preference number: 4 (lower is better)
Translates to: TFETFGSVLGVI*VMLKRISANPV
Trigger: TACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACAGAACCAAAAGTTTCAAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTCACGACAGCGGAAGTaGTCTGATTCGCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYSRQRK*SDSLDD
Trigger: ATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCCGGAGTTGGTCGATTaGTTGTTCCAAGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIPELVD*LFQAFF
Trigger: AAAGAAAGCTTGGAACAATCAATCGACCAACTCCGG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTTCTCAATAAACGTTaGCTCCGGAGTTGGTCGATT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCFLNKR*LRSWSI
Trigger: AATCGACCAACTCCGGAGTCAACGTTTATTGAGAAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATTTCTCAATAAACGTTaGCTCCGGAGTTGGTCGATT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITFLNKR*LRSWSI
Trigger: AATCGACCAACTCCGGAGTCAACGTTTATTGAGAAA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAATATCATCAGTCTCTTaGACAAACCGGACACCAGTT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITISSVS*TNRTPV
Trigger: AACTGGTGTCCGGTTTGTTCAAGAGACTGATGATAT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATGGCACTCAGGTCCTTaGTGGACTCTTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSWHSGP*WTLASQ
Trigger: TTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTGGCACTCAGGTCCTTaGTGGACTCTTGCATCTCAA +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYWHSGP*WTLASQ
Trigger: TTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCTTCAGAGTCCTGATATaGTTCTCAGCCTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNIFRVLI*FSASLF
Trigger: AAAGAGTGAGGCTGAGAATCATATCAGGACTCTGAA...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTCAGAGTCCTGATATaGTTCTCAGCCTCACTCTTT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCFRVLI*FSASLF
Trigger: AAAGAGTGAGGCTGAGAATCATATCAGGACTCTGAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCCAAGCAAAGAAGTTaGTCCTTGAGCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISKQRS*SLSCNL
Trigger: CAGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCCTCACAGAGCCACTaGAGTTTAGTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISSQSH*SLVLLS
Trigger: AGAAAGCAAGACTAAACTTCAGTGGCTCTGTGAGGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTGCCTTTCTATCTGTTaGAAGAGACACTGCAACTCA +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCCLSIC*KRHCNS
Trigger: TGAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACCCCTCATGCTCATCTaGTTTAGCTTCTTGTTTCTT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITPLMLI*FSFLFL
Trigger: AAGAAACAAGAAGCTAAAGCAGATGAGCATGAGGGG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACAAAGTGTTTCTCGGCTaGCTTCTGATTGATTCAATA +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNKVFLG*LLIDSI
Trigger: TATTGAATCAATCAGAAGGCAGCCGAGAAACACTTT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAAAAGTGTTTCTCGGCTaGCTTCTGATTGATTCAATA +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRKVFLG*LLIDSI
Trigger: TATTGAATCAATCAGAAGGCAGCCGAGAAACACTTT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCGCGCTGAAGTTCAGCTaGACTCTCAAATCTGACATT +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIALKFS*TLKSDI
Trigger: AATGTCAGATTTGAGAGTGCAGCTGAACTTCAGCGC...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTCTTTGGATCTTACTCTaGTTTTTCAATTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCILWILL*FFNSLS
Trigger: GGAGAGCGAATTGAAAAAGCAGAGTAAGATCCAAAG...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAAGGTCCTTAAGCACTaGTTTCTTGGCTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIKVLKH*FLGSLF
Trigger: GAAGAGAGAGCCAAGAAAGCAGTGCTTAAGGACCTT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACTTCAGCTCCCTCTGGTaGACATCTCGTTCCAGCTTT +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYFSSLW*TSRSSF
Trigger: AAAGCTGGAACGAGATGTGCACCAGAGGGAGCTGAA...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTCCATCCTCCTTAAGTaGTCCTCTTCAATGCTTATA +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCISILLK*SSSMLI
Trigger: TATAAGCATTGAAGAGGAGCACTTAAGGAGGATGGA...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp AGGAATGCTGTGGCTGAAGAATTTTCTCTTCTCGTCCCAGAAATGAAGAAAGATATTTCATCCAGAAGCTaGTCCTGCCTTTCTATCTGT +
Preference number: 4 (lower is better)
Translates to: RNAVAEEFSLLVPEMKKDISSRS*SCLSIC
Trigger: ACAGATAGAAAGGCAGGAGCAGCTTCTGGATGAAAT...ATCTTTCTTCATTTCTGGGACGAGAAGAGAAAATTCTTCAGCCACAGCATTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR GCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAGACAAAGGAGTTTGGTaGTATGATTTTAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRDKGVW*YDFSHS
Trigger: ACTGTGACTAAAATCATAGCACCAAACTCCTTTGTC...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAAGTGATCTGATTCGCTaGATGATTCTGCCATTGATG +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITSDLIR*MILPLM
Trigger: CATCAATGGCAGAATCATCCAGCGAATCAGATCACT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATATCGTCCAAGCATCTaGTCCACTTGTCGCAGGTTC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSYRPSI*STCRRF
Trigger: GAACCTGCGACAAGTGGACCAGATGCTTGGACGATA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCGTTTAATACCCTGTaGATCCCCATAGTCCTTGAG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISFNTL*IPIVLE
Trigger: CTCAAGGACTATGGGGATCCACAGGGTATTAAACGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAACTTTCATCTGGCTTTaGATCTTACTCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRTFIWL*ILLCFF
Trigger: GAAAAAGCAGAGTAAGATCCAAAGCCAGATGAAAGT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTTCTCAACTTTCATCTaGCTTTGGATCTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIFSTFI*LWILLC
Trigger: GCAGAGTAAGATCCAAAGCCAGATGAAAGTTGAGAA...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAAGTTTAGCTTTGTCCTaGGCCTGGCTCTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSLALS*AWLFLS
Trigger: GCTCAAGAAGAGCCAGGCCCAGGACAAAGCTAAACT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACATGGTCCAAGGCCACTTaGGTACTCGTTTCTAATGCA +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTWSKAT*VLVSNA
Trigger: TGCATTAGAAACGAGTACCCAAGTGGCCTTGGACCA...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAAATCCAAATTTTGGTTaGGAAAATGTGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRNPNFG*ENVTDH
Trigger: GTGGTCAGTCACATTTTCCCAACCAAAATTTGGATT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGATACGGTATGCAGTTGTaGACTGTTAAGATGATAGAT +
Preference number: 4 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRYGMQL*TVKMID
Trigger: ATCTATCATCTTAACAGTCCACAACTGCATACCGTA...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCAAAATCACTTGGCACTaGCTGGAGTGTAGAAACAGA +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNIKITWH*LECRNR
Trigger: TCTGTTTCTACACTCCAGCCAGTGCCAAGTGATTTT...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCGCAGTTCTTCTACCTaGTGCAAAAGTGTTTCTCGG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYRSSST*CKSVSR
Trigger: CCGAGAAACACTTTTGCATCAGGTAGAAGAACTGCG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCAGTCTGTCACACTGTaGTTTCAACTTCTCCAGCTG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYQSVTL*FQLLQL
Trigger: CAGCTGGAGAAGTTGAAATCACAGTGTGACAGACTG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAAGGTTCTGTCACCTTTaGAACTTTTGGTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITRFCHL*NFWFCT
Trigger: AGTACAGAACCAAAAGTTTCAAAGGTGACAGAACCT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTACCATCAAGGTCACTTaGACTCAAACTTGTAACAGA +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCTIKVT*TQTCNR
Trigger: TCTGTTACAAGTTTGAGTGCAAGTGACCTTGATGGT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCTTTCGATCACCTTCTaGTTTCGTAAGTTGTGTACG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVILSITF*FRKLCT
Trigger: CGTACACAACTTACGAAAGCAGAAGGTGATCGAAAG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCTCAAATCTGACATTTaGTTCTCCAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCLKSDI*FSRSCF
Trigger: AAAACAGGACCTGGAGAAGCAAATGTCAGATTTGAG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCCTCAAATCTGACATTTaGTTCTCCAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNILKSDI*FSRSCF
Trigger: AAAACAGGACCTGGAGAAGCAAATGTCAGATTTGAG...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACATCCAACATCTGCAGTTaGTGTTTTTCCCCATTCTCC +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTSNICS*CFSPFS
Trigger: GGAGAATGGGGAAAAACAGCAACTGCAGATGTTGGA...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATTCATCCCTGGATTTTaGCTGTGCAGTGAGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSFIPGF*LCSEVR
Trigger: TCTGACCTCACTGCACAGGCAAAATCCAGGGATGAA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATCCATCCTCCTTAAGTaGTCCTCTTCAATGCTTATA +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITSILLK*SSSMLI
Trigger: TATAAGCATTGAAGAGGAGCACTTAAGGAGGATGGA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATTTTCAGCTACGGTATaGAGTTGTGGACTGTTAAGA +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITFSATV*SCGLLR
Trigger: TCTTAACAGTCCACAACTGCATACCGTAGCTGAAAA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACAGTTTGACTGTTGCTTaGAAATCTGAGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNSLTVA*KSEILD
Trigger: ATCAAGTATCTCAGATTTCCAAGCAACAGTCAAACT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAGTAATTTCTCCTCCTTaGAGTGAAGCTCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSVISPP*SEAPPP
Trigger: AGGAGGAGGAGCTTCACTCCAAGGAGGAGAAATTAC...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCTATCACACCAAGAATaGATTCCTGTTCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVILSHQE*IPVQSP
Trigger: TGGAGACTGAACAGGAATCCATTCTTGGTGTGATAG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCTCCACTGAGTCCTTaGAGAATGTTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISPLSP*RMFYKL
Trigger: CAGCTTGTAAAACATTCTCCAAGGACTCAGTGGAGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCTGCGAACCCTGTATTTaGAATATCTTCCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNICEPCI*NIFHQF
Trigger: GAACTGATGGAAGATATTCCAAATACAGGGTTCGCA...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATATAGTCCTTGAGAGGTaGGGTAGGTGGAAAATGATG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYIVLER*GRWKMM
Trigger: CATCATTTTCCACCTACCTCACCTCTCAAGGACTAT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACTCTGCAATGATGATGTaGGATCTTTCAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYSAMMM*DLSAPS
Trigger: AGAGGGAGCTGAAAGATCTCACATCATCATTGCAGA...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTCTGCAATGATGATGTaGGATCTTTCAGCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYSAMMM*DLSAPS
Trigger: AGAGGGAGCTGAAAGATCTCACATCATCATTGCAGA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTAAATGCAGTTATCATAAAAGAAGTTGATCCTTaGGCTGCAATCTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: QYVLSINSCTQPVNAVIIKEVDP*AAIWPL
Trigger: AAGAGGCCAGATTGCAGCTCAAGGATCAACTTCTTT...TATGATAACTGCATTTACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATCCTCACAGAGCCACTaGAGTTTAGTCTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSSQSH*SLVLLS
Trigger: AGAAAGCAAGACTAAACTTCAGTGGCTCTGTGAGGA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTGACTGACCACACTTaGAAAAGGAAAATACAAAGT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITVTDHT*KRKIQS
Trigger: ACTTTGTATTTTCCTTTTTCAAGTGTGGTCAGTCAC...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTAAATGCAGTTATCATAGAGGAATGCTGTGGCTaGAGAATTTTCTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: QYVLSINSCTQPVNAVIIEECCG*RIFSSR
Trigger: ACGAGAAGAGAAAATTCTTCAGCCACAGCATTCCTC...TATGATAACTGCATTTACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTAGGCACATATGTCTaGCTCCTATCATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCLGTYV*LLSFLH
Trigger: ATGAAGAAATGATAGGAGGCAGACATATGTGCCTAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTAAAGTGTTTCTCGGCTaGCTTCTGATTGATTCAATA +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCKVFLG*LLIDSI
Trigger: TATTGAATCAATCAGAAGGCAGCCGAGAAACACTTT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAAGTCGATCCAACATCTaGAGTTGCTGTTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSRSNI*SCCFSP
Trigger: TGGGGAAAAACAGCAACTGCAGATGTTGGATCGACT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACAGTCGATCCAACATCTaGAGTTGCTGTTTTTCCCCA +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYSRSNI*SCCFSP
Trigger: TGGGGAAAAACAGCAACTGCAGATGTTGGATCGACT...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCCTTTGGATCTTACTCTaGTTTTTCAATTCGCTCTCC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVILWILL*FFNSLS
Trigger: GGAGAGCGAATTGAAAAAGCAGAGTAAGATCCAAAG...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATTTATTAGCAAGATCTaGTCGGATGGCACTCAGGTC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSFISKI*SDGTQV
Trigger: GACCTGAGTGCCATCCGAGCAGATCTTGCTAATAAA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTCCATCCTCCTTAAGTaGTCCTCTTCAATGCTTATA +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVISILLK*SSSMLI
Trigger: TATAAGCATTGAAGAGGAGCACTTAAGGAGGATGGA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGACAAAGGAGTTTGGTaGTATGATTTTAGTCACAGT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCDKGVW*YDFSHS
Trigger: ACTGTGACTAAAATCATAGCACCAAACTCCTTTGTC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAAAGGTATTGCTTTATTaGCCTTGTCTATGCAGAATC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITKVLLY*PCLCRI
Trigger: GATTCTGCATAGACAAGGGCAATAAAGCAATACCTT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAAATGGAGTCAGTTATTaGTTAAGCCCCCAGCATCTA +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTNGVSY*LSPQHL
Trigger: TAGATGCTGGGGGCTTAAGCAATAACTGACTCCATT...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTAGTTTGACTGTTGCTTaGAAATCTGAGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: CTWCHLGDAEENFCEPCISLTVA*KSEILD
Trigger: ATCAAGTATCTCAGATTTCCAAGCAACAGTCAAACT...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAACTTTCATCTGGCTTTaGATCTTACTCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITTFIWL*ILLCFF
Trigger: GAAAAAGCAGAGTAAGATCCAAAGCCAGATGAAAGT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCACTTTCATCTGGCTTTaGATCTTACTCTGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: CHLGDAEENFCEPCIWNITFIWL*ILLCFF
Trigger: GAAAAAGCAGAGTAAGATCCAAAGCCAGATGAAAGT...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTTCTCAACTTTCATCTaGCTTTGGATCTTACTCTGC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIFSTFI*LWILLC
Trigger: GCAGAGTAAGATCCAAAGCCAGATGAAAGTTGAGAA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTGCTTCATAAGCTCCTaGATATTCTGTTCGTGTTTT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCCFISS*IFCSCF
Trigger: AAAACACGAACAGAATATCCAGGAGCTTATGAAGCA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATACGGTATGCAGTTGTaGACTGTTAAGATGATAGAT +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITYGMQL*TVKMID
Trigger: ATCTATCATCTTAACAGTCCACAACTGCATACCGTA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAATGGACAAAGGAGTTTaGTGCTATGATTTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITMDKGV*CYDFSH
Trigger: GTGACTAAAATCATAGCACCAAACTCCTTTGTCCAT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR CAA 72 bp TATAAATGCTCCCTGAATCTAAAGTGCTGGCAACTTTaGCCTCAAGGGAAACTCATTTTCCTTCTTTTTAGC +
Preference number: 4 (lower is better)
Translates to: YKCSLNLKCWQL*PQGKLIFLLFS
Trigger: GCTAAAAAGAAGGAAAATGAGTTTCCCTTGAGGCAAAAGTTGCCAGCACTTTAGATTCAGGGAGCATTTATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACTTTCAGTCAAATTCCTaGGTTGTTGTCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYFQSNS*VVVCRA
Trigger: TGCTCTGCAGACAACAACTCAGGAATTTGACTGAAA...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp CAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTAAATGCAGTTATCATATTTCAGTCAAATTCCTaGGTTGTTGTCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QYVLSINSCTQPVNAVIIFQSNS*VVVCRA
Trigger: TGCTCTGCAGACAACAACTCAGGAATTTGACTGAAA...TATGATAACTGCATTTACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR TCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTTTCAGTCAAATTCCTaGGTTGTTGTCTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYFQSNS*VVVCRA
Trigger: TGCTCTGCAGACAACAACTCAGGAATTTGACTGAAA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAATCAGTTCTCTCAGATaGACTGCAGGAATCTCTGAA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSISSLR*TAGISE
Trigger: TTCAGAGATTCCTGCAGTTCATCTGAGAGAACTGAT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAAGGTTCTGTCACCTTTaGAACTTTTGGTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTRFCHL*NFWFCT
Trigger: AGTACAGAACCAAAAGTTTCAAAGGTGACAGAACCT...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR TCA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTAGGTTCTGTCACCTTTaGAACTTTTGGTTCTGTACT +
Preference number: 4 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLIRFCHL*NFWFCT
Trigger: AGTACAGAACCAAAAGTTTCAAAGGTGACAGAACCT...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATCTATGCAGAATCCATaGCCCAATAGGATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSMQNP*PNRIQF
Trigger: GAACTGAATCCTATTGGGTCATGGATTCTGCATAGA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCTTTCGATCACCTTCTaGTTTCGTAAGTTGTGTACG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYLSITF*FRKLCT
Trigger: CGTACACAACTTACGAAAGCAGAAGGTGATCGAAAG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAGTGCTGGCAACTTTTaGCTCAAGGGAAACTCATTT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYSAGNF*LKGNSF
Trigger: AAATGAGTTTCCCTTGAGGCAAAAGTTGCCAGCACT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAAGGTATTGCTTTATTaGCCTTGTCTATGCAGAATC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIKVLLY*PCLCRI
Trigger: GATTCTGCATAGACAAGGGCAATAAAGCAATACCTT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAGTGATCTGATTCGCTaGATGATTCTGCCATTGATG +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYSDLIR*MILPLM
Trigger: CATCAATGGCAGAATCATCCAGCGAATCAGATCACT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTAGTTTGACTGTTGCTTaGAAATCTGAGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCSLTVA*KSEILD
Trigger: ATCAAGTATCTCAGATTTCCAAGCAACAGTCAAACT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTAAATGCAGTTATCATACTATCACACCAAGAATaGATTCCTGTTCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: QYVLSINSCTQPVNAVIILSHQE*IPVQSP
Trigger: TGGAGACTGAACAGGAATCCATTCTTGGTGTGATAG...TATGATAACTGCATTTACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCTATCACACCAAGAATaGATTCCTGTTCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYLSHQE*IPVQSP
Trigger: TGGAGACTGAACAGGAATCCATTCTTGGTGTGATAG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACTCTCCACTGAGTCCTTaGAGAATGTTTTACAAGCTG +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYSPLSP*RMFYKL
Trigger: CAGCTTGTAAAACATTCTCCAAGGACTCAGTGGAGA...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTTGCGAACCCTGTATTTaGAATATCTTCCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLICEPCI*NIFHQF
Trigger: GAACTGATGGAAGATATTCCAAATACAGGGTTCGCA...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CCA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCATGGACAAAGGAGTTTaGTGCTATGATTTTAGTCAC +
Preference number: 4 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIMDKGV*CYDFSH
Trigger: GTGACTAAAATCATAGCACCAAACTCCTTTGTCCAT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACGAAAGGTCCTTGCTTTaGCTGATTTTACCAGATTCC +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYERSLL*LILPDS
Trigger: GGAATCTGGTAAAATCAGCCAAAGCAAGGACCTTTC...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554502.5
3UTR CAA 72 bp TTTGGATTGGTTTACCATTCACAAGGACCAACAGTATaGTCACTTTTGTCAATGTTTGGCAATACCAAAGAG +
Preference number: 4 (lower is better)
Translates to: FGLVYHSQGPTV*SLLSMFGNTKE
Trigger: CTCTTTGGTATTGCCAAACATTGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATTGGTTGGGAAAATGTaGCTGACCACACTTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLVGKM*LTTLEK
Trigger: TTTTTCAAGTGTGGTCAGTCACATTTTCCCAACCAA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCTCAAATCTGACATTTaGTTCTCCAGGTCCTGTTTT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYLKSDI*FSRSCF
Trigger: AAAACAGGACCTGGAGAAGCAAATGTCAGATTTGAG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATCCTTGATGGACTCTTaGATCTCAAGAAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSLMDS*ISRSLA
Trigger: AGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATATTGCCCTTGTCTATaGAGAATCCATGACCCAATA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSYCPCL*RIHDPI
Trigger: TATTGGGTCATGGATTCTGCATAGACAAGGGCAATA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAAATGCTGCATACAGCTaGGTTTTCAATTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTNAAYS*VFNSSF
Trigger: AAAGGATGAATTGAAAACCCAGCTGTATGCAGCATT...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATGCGAACCCTGTATTTaGAATATCTTCCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSCEPCI*NIFHQF
Trigger: GAACTGATGGAAGATATTCCAAATACAGGGTTCGCA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTGCGAACCCTGTATTTaGAATATCTTCCATCAGTTC +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYCEPCI*NIFHQF
Trigger: GAACTGATGGAAGATATTCCAAATACAGGGTTCGCA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTTTGTTCCATTCATTGTaGCATCTTCCTTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLILFHSL*HLPCLK
Trigger: CTTCAAACAAGGAAGATGCCACAATGAATGGAACAA...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR TCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAGTGACTGACCACACTTaGAAAAGGAAAATACAAAGT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSVTDHT*KRKIQS
Trigger: ACTTTGTATTTTCCTTTTTCAAGTGTGGTCAGTCAC...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR GCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATTAGGCACATATGTCTaGCTCCTATCATTTCTTCAT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLGTYV*LLSFLH
Trigger: ATGAAGAAATGATAGGAGGCAGACATATGTGCCTAA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAATGCTGCATACAGCTaGGTTTTCAATTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYNAAYS*VFNSSF
Trigger: AAAGGATGAATTGAAAACCCAGCTGTATGCAGCATT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAAATGCTGCATACAGCTaGGTTTTCAATTCATCCTTT +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSNAAYS*VFNSSF
Trigger: AAAGGATGAATTGAAAACCCAGCTGTATGCAGCATT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATTGTTCCATTCATTGTaGCATCTTCCTTGTTTGAAG +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLFHSL*HLPCLK
Trigger: CTTCAAACAAGGAAGATGCCACAATGAATGGAACAA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAAATCCAAATTTTGGTTaGGAAAATGTGACTGACCAC +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSNPNFG*ENVTDH
Trigger: GTGGTCAGTCACATTTTCCCAACCAAAATTTGGATT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
3UTR CAA 72 bp ACACAACTTCACTTACAAAAACAGATACAGGGAGGATaGATACATATCTATTTCCAAATGTGTCATCCATGT +
Preference number: 4 (lower is better)
Translates to: TQLHLQKQIQGG*IHIYFQMCHPC
Trigger: ACATGGATGACACATTTGGAAATAGATATGTATCAATCCTCCCTGTATCTGTTTTTGTAAGTGAAGTTGTGT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR GCA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACATAGTACAGTATTACTaGCTTTCCTACCTTGGAAAA +
Preference number: 4 (lower is better)
Translates to: HENISSGGKNLVAKFHIYIVQYY*LSYLGK
Trigger: TTTTCCAAGGTAGGAAAGGCAGTAATACTGTACTAT...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CCA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAGTTTGACTGTTGCTTaGAAATCTGAGATACTTGAT +
Preference number: 4 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYSLTVA*KSEILD
Trigger: ATCAAGTATCTCAGATTTCCAAGCAACAGTCAAACT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CCA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAACTTTTGTCAATGTTTaGCAATACCAAAGAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSTFVNV*QYQRAK
Trigger: TTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS TCA 90 bp CCGCTCAGCCTGCTTGGTTGCATCCTCCGCATGGCGAGTCAGCTCTaGGATCTGAAGGTCAGCATGCTTACGCTCGGCCTCACATGTGTC +
Preference number: 5 (lower is better)
Translates to: PLSLLGCILRMASQL*DLKVSMLTLGLTCV
Trigger: GACACATGTGAGGCCGAGCGTAAGCATGCTGACCTTCAGATCTCAGAGCTGACTCGCCATGCGGAGGATGCAACCAAGCAGGCTGAGCGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS TCA 90 bp CTCGGTAACTTCTACTGTAGGAAGACTTCGAGTTCCCCTGTGCGTTaGTCTGGCAGCCCATGGACTCAATCGGTCACGACAGCGGAAGTG +
Preference number: 5 (lower is better)
Translates to: LGNFYCRKTSSSPVR*SGSPWTQSVTTAEV
Trigger: CACTTCCGCTGTCGTGACCGATTGAGTCCATGGGCTGCCAGATCAACGCACAGGGGAACTCGAAGTCTTCCTACAGTAGAAGTTACCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000557411.5
CDS GCA 90 bp ACCTTCTCGGTAACTTCTACTGTAGGAAGACTTCGAGTTCCCCTGTaGGTTGATCTGGCAGCCCATGGACTCAATCGGTCACGACAGCGG +
Preference number: 5 (lower is better)
Translates to: TFSVTSTVGRLRVPL*VDLAAHGLNRSRQR
Trigger: CCGCTGTCGTGACCGATTGAGTCCATGGGCTGCCAGATCAACGCACAGGGGAACTCGAAGTCTTCCTACAGTAGAAGTTACCGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000557411.5
CDS TCA 90 bp TGTTTCTTTAGTGCCTCCTGTAGCTGCAGGGACATGAGTCCCAGTTaGTCCTGGCGTCTTTCCACCAGCTCCCTTTCTGTGCGCATCTCT +
Preference number: 5 (lower is better)
Translates to: CFFSASCSCRDMSPS*SWRLSTSSLSVRIS
Trigger: AGAGATGCGCACAGAAAGGGAGCTGGTGGAAAGACGCCAGGATCAACTGGGACTCATGTCCCTGCAGCTACAGGAGGCACTAAAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS GCA 90 bp ATTCACGGCACACCAAAAGTAGATGTGAGGCTGTCAGCTCATTACTaGTGCTACTTCAGTCTAGGTGTCATCTCCTCACTGGGGGCGGGG +
Preference number: 5 (lower is better)
Translates to: IHGTPKVDVRLSAHY*CYFSLGVISSLGAG
Trigger: CCCCGCCCCCAGTGAGGAGATGACACCTAGACTGAAGTAGCAGCAGTAATGAGCTGACAGCCTCACATCTACTTTTGGTGTGCCGTGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556981.5
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGCTCAGCCTGCTTGGTaGCATCCTCCGCATGGCGAG +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATAQPAW*HPPHGE
Trigger: CTCGCCATGCGGAGGATGCAACCAAGCAGGCTGAGC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGGCTCAGCCTGCTTGGTaGCATCCTCCGCATGGCGAG +
Preference number: 5 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRAQPAW*HPPHGE
Trigger: CTCGCCATGCGGAGGATGCAACCAAGCAGGCTGAGC...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAGCTCAGCCTGCTTGGTaGCATCCTCCGCATGGCGAG +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRAQPAW*HPPHGE
Trigger: CTCGCCATGCGGAGGATGCAACCAAGCAGGCTGAGC...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATACCGCTCAGCCTGCTaGGTTGCATCCTCCGCATGG +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATYRSAC*VASSAW
Trigger: CCATGCGGAGGATGCAACCAAGCAGGCTGAGCGGTA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS CCA 90 bp GCACCCGCCTGTCCATTACTGTATTCTCGGTATCGTCCAAGCATCTaGTCCACTTGTCGCAGGTTCCGACTGGTATCCTGTAAAGTACTT +
Preference number: 5 (lower is better)
Translates to: APACPLLYSRYRPSI*STCRRFRLVSCKVL
Trigger: AAGTACTTTACAGGATACCAGTCGGAACCTGCGACAAGTGGACCAGATGCTTGGACGATACCGAGAATACAGTAATGGACAGGCGGGTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000557411.5
CDS-3UTR CAA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGTACCGCTCAGCCTGCTaGGTTGCATCCTCCGCATGG +
Preference number: 5 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRYRSAC*VASSAW
Trigger: CCATGCGGAGGATGCAACCAAGCAGGCTGAGCGGTA...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS TCA 90 bp GTTGATCTGGCAGCCCATGGACTCAATCGGTCACGACAGCGGAAGTaGTCTGATTCGCTGGATGATTCTGCCATTGATGTACACAAATCG +
Preference number: 5 (lower is better)
Translates to: VDLAAHGLNRSRQRK*SDSLDDSAIDVHKS
Trigger: CGATTTGTGTACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGACCGATTGAGTCCATGGGCTGCCAGATCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556042.5
CDS CCA 90 bp CCCATGGACTCAATCGGTCACGACAGCGGAAGTGATCTGATTCGCTaGATGATTCTGCCATTGATGTACACAAATCAAAGCACACCCCCA +
Preference number: 5 (lower is better)
Translates to: PMDSIGHDSGSDLIR*MILPLMYTNQSTPP
Trigger: TGGGGGTGTGCTTTGATTTGTGTACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGACCGATTGAGTCCATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556981.5
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGGACATGAGTCCCAGTaGATCCTGGCGTCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATGHESQ*ILASFH
Trigger: GTGGAAAGACGCCAGGATCAACTGGGACTCATGTCC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS TCA 90 bp GTTGATCTGGCAGCCCATGGACTCAATCGGTCACGACAGCGGAAGTaGTCTGATTCGCTGGATGATTCTGCCATTGATGTACACAAATCA +
Preference number: 5 (lower is better)
Translates to: VDLAAHGLNRSRQRK*SDSLDDSAIDVHKS
Trigger: TGATTTGTGTACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGACCGATTGAGTCCATGGGCTGCCAGATCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556981.5
CDS TCA 90 bp AATAGTCTTGATGTACGGGTAAGAGCTGAGGCCGCCATAGAGAGGTaGCCATCTTCACCTGTGTTCAAGAAGCAGCTGACAATGCTAACG +
Preference number: 5 (lower is better)
Translates to: NSLDVRVRAEAAIER*PSSPVFKKQLTMLT
Trigger: CGTTAGCATTGTCAGCTGCTTCTTGAACACAGGTGAAGATGGTCACCTCTCTATGGCGGCCTCAGCTCTTACCCGTACATCAAGACTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554368.1
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACGGACATGAGTCCCAGTaGATCCTGGCGTCTTTCCAC +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNGHESQ*ILASFH
Trigger: GTGGAAAGACGCCAGGATCAACTGGGACTCATGTCC...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATGGGCCTGGCTCTTCTaGAGCTCTGCAATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATWAWLF*SSAISS
Trigger: GGAAGAAATTGCAGAGCTCAAGAAGAGCCAGGCCCA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATT +
Preference number: 5 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGVLGVI*VMLKRI
Trigger: AATTCTCTTCAGCATCACCAAGATGACACCAAGTAC...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGATGGCATCTTCCTTGTTaGAAGCTGAATCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGWHLPC*KLNLEQ
Trigger: TTGCTCCAGATTCAGCTTCAAACAAGGAAGATGCCA...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS GCA 90 bp TGCTTTCTTGGCTCTCTCTTCCTCAGCCAATTTATTAGCAAGATCTaGTCGGATGGCACTCAGGTCCTTGATGGACTCTTGCATCTCAAG +
Preference number: 5 (lower is better)
Translates to: CFLGSLFLSQFISKI*SDGTQVLDGLLHLK
Trigger: CTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTTGCTAATAAATTGGCTGAGGAAGAGAGAGCCAAGAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 90 bp ATGAGGTTCAGGGCAAAGGGCCTAGTCAAGCCGATGATCTTTGGTTaGCCCTACACTTTCCCCAAACCACCTAAGATCATATGGCTTATT +
Preference number: 5 (lower is better)
Translates to: MRFRAKGLVKPMIFG*PYTFPKPPKIIWLI
Trigger: AATAAGCCATATGATCTTAGGTGGTTTGGGGAAAGTGTAGGGGCAACCAAAGATCATCGGCTTGACTAGGCCCTTTGCCCTGAACCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556981.5
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACCCCAAAACTCCGAGTaGCTCTTCTCTGAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRPQNSE*LFSELN
Trigger: GTTGAGCTCAGAGAAGAGCAACTCGGAGTTTTGGGG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACTGGAAAGCTCCCTGTaGAAATCATCTCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATLESSL*KSSPRR
Trigger: TCGCCTTGGAGATGATTTCAACAGGGAGCTTTCCAG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACTTCCAAAGCCCTTTTaGTTTCGGCATCTGACCGGC +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRLPKPF*FRHLTG
Trigger: GCCGGTCAGATGCCGAAACAAAAAGGGCTTTGGAAG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCTTCCAAAGCCCTTTTaGTTTCGGCATCTGACCGGC +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNLPKPF*FRHLTG
Trigger: GCCGGTCAGATGCCGAAACAAAAAGGGCTTTGGAAG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGGAATCTCTGAAGTCTTaGAAATCTTCTAGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGESLKS*KSSSRL
Trigger: GAGCCTACTAGAAGATTTCAAAGACTTCAGAGATTC...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGAACTTGTTCCATTCATaGTGGCATCTTCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGNLFHS*WHLPCL
Trigger: CAAACAAGGAAGATGCCACAATGAATGGAACAAGTT...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGTTTTGGGTTGTGAACTaGTTCCATTCATTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGFWVVN*FHSLWH
Trigger: ATGCCACAATGAATGGAACAAGTTCACAACCCAAAA...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp GATCCTGATGAATGGGCAGAGTCCTGGCATAGTCTGTTAGAAGGAGGAGGTGGGCCATATTCCTCTTTTTaGGGTTGTGAACTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: DPDEWAESWHSLLEGGGGPYSSF*GCELVP
Trigger: TGGAACAAGTTCACAACCCAAAAAAGAGGAATATGG...CCCACCTCCTCCTTCTAACAGACTATGCCAGGACTCTGCCCATTCATCAGGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTAGCAGTGTAGTGTGGTaGACAGCAGCCTTCCAGCCT +
Preference number: 5 (lower is better)
Translates to: CTWCHLGDAEENFCEPCISSVVW*TAAFQP
Trigger: AGGCTGGAAGGCTGCTGTCAACCACACTACACTGCT...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTTCTTTGTTCCCTCTCTaGGGTTGCAGAGAAGATAGG +
Preference number: 5 (lower is better)
Translates to: KRMSDLTHECGNLPERFCSLFPL*GCREDR
Trigger: CCTATCTTCTCTGCAACCCAAGAGAGGGAACAAAGA...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS TCA 90 bp TCCTGGGCCTGGCTCTTCTTGAGCTCTGCAATTTCTTCCTCCAAGTaGGCTTTCTCAACTTTCATCTGGCTTTGGATCTTACTCTGCTTT +
Preference number: 5 (lower is better)
Translates to: SWAWLFLSSAISSSK*AFSTFIWLWILLCF
Trigger: AAAGCAGAGTAAGATCCAAAGCCAGATGAAAGTTGAGAAAGCTCACTTGGAGGAAGAAATTGCAGAGCTCAAGAAGAGCCAGGCCCAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS TCA 90 bp CAAGAATGGATTCCTGTTCAGTCTCCAAGCAAAGAAGTTGATCCTTaGGCTGCAATCTGGCCTCTTCCATCCTCCTTAAGTGCTCCTCTT +
Preference number: 5 (lower is better)
Translates to: QEWIPVQSPSKEVDP*AAIWPLPSSLSAPL
Trigger: AAGAGGAGCACTTAAGGAGGATGGAAGAGGCCAGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGAGACTGAACAGGAATCCATTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 90 bp AGTTGCTCTTCTCTGAGCTCAACGCTCTTTTTAGGCACATATGTCTaGCTCCTATCATTTCTTCATGAGGTTCAGGGCAAAGGGCCTAGT +
Preference number: 5 (lower is better)
Translates to: SCSSLSSTLFLGTYV*LLSFLHEVQGKGPS
Trigger: ACTAGGCCCTTTGCCCTGAACCTCATGAAGAAATGATAGGAGGCAGACATATGTGCCTAAAAAGAGCGTTGAGCTCAGAGAAGAGCAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556981.5
ENST00000557411.5
CDS GCA 90 bp CCTGGATTTTGCCTGTGCAGTGAGGTCAGAAAGGTCCTTAAGCACTaGTTTCTTGGCTCTCTCTTCCTCAGCCAATTTATTAGCAAGATC +
Preference number: 5 (lower is better)
Translates to: PGFCLCSEVRKVLKH*FLGSLFLSQFISKI
Trigger: GATCTTGCTAATAAATTGGCTGAGGAAGAGAGAGCCAAGAAAGCAGTGCTTAAGGACCTTTCTGACCTCACTGCACAGGCAAAATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CCA 90 bp TTGAAATCTTCTAGTAGGCTCAGTTTCTCAGGCACAGACTCCAGATaGTCCAAGGCCACTTGGGTACTCGTTTCTAATGCAATTACACGG +
Preference number: 5 (lower is better)
Translates to: LKSSSRLSFSGTDSR*SKATWVLVSNAITR
Trigger: CCGTGTAATTGCATTAGAAACGAGTACCCAAGTGGCCTTGGACCATCTGGAGTCTGTGCCTGAGAAACTGAGCCTACTAGAAGATTTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
ENST00000556061.5
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAATCTCCAAGGCGAATTaGTTCACTGCTGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRISKAN*FTAEVS
Trigger: CGAGACCTCAGCAGTGAACAAATTCGCCTTGGAGAT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACATCTCCAAGGCGAATTaGTTCACTGCTGAGGTCTCG +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNISKAN*FTAEVS
Trigger: CGAGACCTCAGCAGTGAACAAATTCGCCTTGGAGAT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCTGGAAAGCTCCCTGTaGAAATCATCTCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNLESSL*KSSPRR
Trigger: TCGCCTTGGAGATGATTTCAACAGGGAGCTTTCCAG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTGTCCTTGATGGACTCTaGCATCTCAAGAAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: KRMSDLTHECGNLPERFCVLDGL*HLKKFS
Trigger: GCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGAC...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTCTCCAAGCAAAGAAGTaGATCCTTGAGCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: KRMSDLTHECGNLPERFCLQAKK*ILELQS
Trigger: AGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGAG...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGATCACCTTTGAAACTTTaGGTTCTGTACTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGSPLKL*VLYLVS
Trigger: TGACACCAAGTACAGAACCAAAAGTTTCAAAGGTGA...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp AATGGCTTTAAGACCTCCACTTGGGTGAGCCTCAGGACTGAATCACAGCTCGGAGGAGCAACAGTTCTTTaGGTAAATGAGTTCACGTAT +
Preference number: 5 (lower is better)
Translates to: NGFKTSTWVSLRTESQLGGATVL*VNEFTY
Trigger: ATACGTGAACTCATTTACCAAAAGAACTGTTGCTCC...TCCGAGCTGTGATTCAGTCCTGAGGCTCACCCAAGTGGAGGTCTTAAAGCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGGAGGGGGAAAGGTCCTaGCTTTGGCTGATTTTACCA +
Preference number: 5 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCREGERS*LWLILP
Trigger: TGGTAAAATCAGCCAAAGCAAGGACCTTTCCCCCTC...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTACCAAAGGCACATTGTaGGCATTCCTATCACGTCAA +
Preference number: 5 (lower is better)
Translates to: KRMSDLTHECGNLPERFCTKGTL*AFLSRQ
Trigger: TTGACGTGATAGGAATGCCAACAATGTGCCTTTGGT...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGCCGATGATCTTTGGTaGCCCCTACACTTTCCCCAA +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCADDLW*PLHFPQ
Trigger: TTGGGGAAAGTGTAGGGGCAACCAAAGATCATCGGC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAAGCATCTGGTCCACTaGTCGCAGGTTCCGACTGGT +
Preference number: 5 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIKHLVH*SQVPTG
Trigger: ACCAGTCGGAACCTGCGACAAGTGGACCAGATGCTT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACATATCATCAGTCTCTaGAACAAACCGGACACCAGT +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATHIISL*NKPDTS
Trigger: ACTGGTGTCCGGTTTGTTCAAGAGACTGATGATATG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACCTGAAGGGCACGCTTaGTTAGGACATCATTCAATT +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATPEGHA*LGHHSI
Trigger: AATTGAATGATGTCCTAACAAAGCGTGCCCTTCAGG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTATGGCACTCAGGTCCTaGATGGACTCTTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: CTWCHLGDAEENFCEPCIMALRS*MDSCIS
Trigger: TGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCAT...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TGCACACAGCCAGTAAATGCAGTTATCATATACACAGGAGGAATGCTGTGGCTGCTGCCTTTCTATCTGTaGAAAGAGACACTGCAACTC +
Preference number: 5 (lower is better)
Translates to: CTQPVNAVIIYTGGMLWLLPFYL*KETLQL
Trigger: GAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCAG...CAGCCACAGCATTCCTCCTGTGTATATGATAACTGCATTTACTGGCTGTGTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR CAA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATT +
Preference number: 5 (lower is better)
Translates to: KRMSDLTHECGNLPERFCVLGVI*VMLKRI
Trigger: AATTCTCTTCAGCATCACCAAGATGACACCAAGTAC...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAAAGTGCTGGCAACTTTaGCCTCAAGGGAAACTCATT +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATKCWQL*PQGKLI
Trigger: AATGAGTTTCCCTTGAGGCAAAAGTTGCCAGCACTT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS GCA 90 bp TTCACACTCTGCAATGATGATGTGAGATCTTTCAGCTCCCTCTGGTaGACATCTCGTTCCAGCTTTAACTGTGTGATGATTGTAGCTGTT +
Preference number: 5 (lower is better)
Translates to: FTLCNDDVRSFSSLW*TSRSSFNCVMIVAV
Trigger: AACAGCTACAATCATCACACAGTTAAAGCTGGAACGAGATGTGCACCAGAGGGAGCTGAAAGATCTCACATCATCATTGCAGAGTGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCATATCATCAGTCTCTaGAACAAACCGGACACCAGT +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNHIISL*NKPDTS
Trigger: ACTGGTGTCCGGTTTGTTCAAGAGACTGATGATATG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATTCTGCTTTCGTAAGTaGTGTACGCAGTTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATFCFRK*CTQFFY
Trigger: GTAGAAGAACTGCGTACACAACTTACGAAAGCAGAA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGCCTGAAGGGCACGCTTaGTTAGGACATCATTCAATT +
Preference number: 5 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRPEGHA*LGHHSI
Trigger: AATTGAATGATGTCCTAACAAAGCGTGCCCTTCAGG...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTGGGCCTGGCTCTTCTaGAGCTCTGCAATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIWAWLF*SSAISS
Trigger: GGAAGAAATTGCAGAGCTCAAGAAGAGCCAGGCCCA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCTCAAGAAGTTTAGCTTaGTCCTGGGCCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: CHLGDAEENFCEPCIWNISRSLA*SWAWLF
Trigger: GAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGA...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTATGGCACTCAGGTCCTaGATGGACTCTTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCMALRS*MDSCIS
Trigger: TGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCAT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAATTGTGGCATCTTCCTaGTTTGAAGCTGAATCTGGA +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATIVASS*FEAESG
Trigger: TCCAGATTCAGCTTCAAACAAGGAAGATGCCACAAT...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS TCA 90 bp GAAAGAGACACTGCAACTCAGATTCCTTGTTTTCAGTCAAATTCCTaGGTTGTTGTCTGCAGAGCATCAGCTGGTGTCGCAGATTTTTCT +
Preference number: 5 (lower is better)
Translates to: ERDTATQIPCFQSNS*VVVCRASAGVADFS
Trigger: AGAAAAATCTGCGACACCAGCTGATGCTCTGCAGACAACAACTCAGGAATTTGACTGAAAACAAGGAATCTGAGTTGCAGTGTCTCTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000554728.1
ENST00000555265.6
CDS TCA 90 bp GAGAGACACCTGAGACAATTTGGGCCAATCAGGCTCTTTATCCTTTaGGAATTTAAAATGGGCACTCAAGCTCCCAATTGGTTGCTAGAA +
Preference number: 5 (lower is better)
Translates to: ERHLRQFGPIRLFIL*EFKMGTQAPNWLLE
Trigger: TTCTAGCAACCAATTGGGAGCTTGAGTGCCCATTTTAAATTCTCAAAGGATAAAGAGCCTGATTGGCCCAAATTGTCTCAGGTGTCTCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554368.1
CDS GCA 90 bp GTTGTGTACGCAGTTCTTCTACCTGATGCAAAAGTGTTTCTCGGCTaGCTTCTGATTGATTCAATAACCTTCGAGATAGCTCCAATTCCT +
Preference number: 5 (lower is better)
Translates to: VVYAVLLPDAKVFLG*LLIDSITFEIAPIP
Trigger: AGGAATTGGAGCTATCTCGAAGGTTATTGAATCAATCAGAAGGCAGCCGAGAAACACTTTTGCATCAGGTAGAAGAACTGCGTACACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS CCA 90 bp ATCTCCAGTCCTCCCCTTGTTCATCCTGATAGTTTGACTGTTGCTTaGAAATCTGAGATACTTGATGCTGTAAACCCTTTCGATCACCTT +
Preference number: 5 (lower is better)
Translates to: ISSPPLVHPDSLTVA*KSEILDAVNPFDHL
Trigger: AAGGTGATCGAAAGGGTTTACAGCATCAAGTATCTCAGATTTCCAAGCAACAGTCAAACTATCAGGATGAACAAGGGGAGGACTGGAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554502.5
ENST00000554827.5
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACATGGATGATTCTGCCATaGATGTACACAAATCAAAGC +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATWMILP*MYTNQS
Trigger: GCTTTGATTTGTGTACATCAATGGCAGAATCATCCA...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAAAGCATCTGGTCCACTaGTCGCAGGTTCCGACTGGT +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSKHLVH*SQVPTG
Trigger: ACCAGTCGGAACCTGCGACAAGTGGACCAGATGCTT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACTTCTGCTTTCGTAAGTaGTGTACGCAGTTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNFCFRK*CTQFFY
Trigger: GTAGAAGAACTGCGTACACAACTTACGAAAGCAGAA...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp AAGAGGATGAGTGATCTAACCCACGAGTGTGGGAACCTTCCAGAAAGGTTCTGTAACTTTCATCTGGCTTaGGATCTTACTCTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: KRMSDLTHECGNLPERFCNFHLA*DLTLLF
Trigger: AAAAAGCAGAGTAAGATCCAAAGCCAGATGAAAGTT...ACAGAACCTTTCTGGAAGGTTCCCACACTCGTGGGTTAGATCACTCATCCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGAATCTCTGAAGTCTTaGAAATCTTCTAGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATESLKS*KSSSRL
Trigger: GAGCCTACTAGAAGATTTCAAAGACTTCAGAGATTC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGACTGCGAACCCTGTATTaGGAATATCTTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRLRTLY*EYLPSV
Trigger: AACTGATGGAAGATATTCCAAATACAGGGTTCGCAG...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACAGGAGCAACAGTTCTTTaGGTAAATGAGTTCACGTAT +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATGATVL*VNEFTY
Trigger: ATACGTGAACTCATTTACCAAAAGAACTGTTGCTCC...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CCAAAGACGGTCCAGGATATGACTGAAGTGATCACAGTAGGATATTTGGCCACACCATATTCCTCTTTTTaGGGTTGTGAACTTGTTCCA +
Preference number: 5 (lower is better)
Translates to: PKTVQDMTEVITVGYLATPYSSF*GCELVP
Trigger: TGGAACAAGTTCACAACCCAAAAAAGAGGAATATGG...TGTGGCCAAATATCCTACTGTGATCACTTCAGTCATATCCTGGACCGTCTTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAAGCTACGGTATGCAGTaGTGGACTGTTAAGATGATA +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRSYGMQ*WTVKMI
Trigger: TATCATCTTAACAGTCCACAACTGCATACCGTAGCT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACAAATTAATGGAGGCATaGCAATTCCACCTCATGCAG +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNKLMEA*QFHLMQ
Trigger: CTGCATGAGGTGGAATTGCAATGCCTCCATTAATTT...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCCCCAAAACTCCGAGTaGCTCTTCTCTGAGCTCAAC +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYPQNSE*LFSELN
Trigger: GTTGAGCTCAGAGAAGAGCAACTCGGAGTTTTGGGG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAGTACTTGTTATAGTGTaGACCTTCTCGGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRVLVIV*TFSVTS
Trigger: AGAAGTTACCGAGAAGGTCAACACTATAACAAGTAC...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCTTCCAAAGCCCTTTTaGTTTCGGCATCTGACCGGC +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYLPKPF*FRHLTG
Trigger: GCCGGTCAGATGCCGAAACAAAAAGGGCTTTGGAAG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCCTGAAGGGCACGCTTaGTTAGGACATCATTCAATT +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCPEGHA*LGHHSI
Trigger: AATTGAATGATGTCCTAACAAAGCGTGCCCTTCAGG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACTGGGCCTGGCTCTTCTaGAGCTCTGCAATTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HENISSGGKNLVAKFHIYWAWLF*SSAISS
Trigger: GGAAGAAATTGCAGAGCTCAAGAAGAGCCAGGCCCA...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCTCCAAGCAAAGAAGTaGATCCTTGAGCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCLQAKK*ILELQS
Trigger: AGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGAG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGTGCAACTCAGATTCCTaGTTTTCAGTCAAATTCCTG +
Preference number: 5 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRCNSDS*FSVKFL
Trigger: CAGGAATTTGACTGAAAACAAGGAATCTGAGTTGCA...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp GAAAAGGAGATGGGCTTGGAAATAGTCCAAAGGGGATGCAACAGAAGTAGGTTTTGCAACTCAGATTCCTaGTTTTCAGTCAAATTCCTG +
Preference number: 5 (lower is better)
Translates to: EKEMGLEIVQRGCNRSRFCNSDS*FSVKFL
Trigger: CAGGAATTTGACTGAAAACAAGGAATCTGAGTTGCA...AAACCTACTTCTGTTGCATCCCCTTTGGACTATTTCCAAGCCCATCTCCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACTGCCTTTCTATCTGTaGAAAGAGACACTGCAACTC +
Preference number: 5 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITLPFYL*KETLQL
Trigger: GAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCAG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGCGAACCCTGTATTTGGAATATCTTCCATCAGTTCTCTCAGATGAACTGCAGGAAGGTTCTGTCACCTTaGAAACTTTTGGTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: CEPCIWNIFHQFSQMNCRKVLSP*KLLVLY
Trigger: GTACAGAACCAAAAGTTTCAAAGGTGACAGAACCTT...CCTGCAGTTCATCTGAGAGAACTGATGGAAGATATTCCAAATACAGGGTTCGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAAAGGTTCTGTCACCTTaGAAACTTTTGGTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRKVLSP*KLLVLY
Trigger: GTACAGAACCAAAAGTTTCAAAGGTGACAGAACCTT...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GAGCCAAAGCTGCAGGTATGTCTGTTAGATAATCTGGGCCAAATTGCTGTAAGAGGAGCAACAGTTCTTTaGGTAAATGAGTTCACGTAT +
Preference number: 5 (lower is better)
Translates to: EPKLQVCLLDNLGQIAVRGATVL*VNEFTY
Trigger: ATACGTGAACTCATTTACCAAAAGAACTGTTGCTCC...TCTTACAGCAATTTGGCCCAGATTATCTAACAGACATACCTGCAGCTTTGGCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATGGCATCTTCCTTGTTaGAAGCTGAATCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITWHLPC*KLNLEQ
Trigger: TTGCTCCAGATTCAGCTTCAAACAAGGAAGATGCCA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACAAAGTGCTGGCAACTTTaGCCTCAAGGGAAACTCATT +
Preference number: 5 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITKCWQL*PQGKLI
Trigger: AATGAGTTTCCCTTGAGGCAAAAGTTGCCAGCACTT...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS TCA 90 bp TCACGATGTATTTCATCCAGAAGCTGCTCCTGCCTTTCTATCTGTTaGAAGAGACACTGCAACTCAGATTCCTTGTTTTCAGTCAAATTC +
Preference number: 5 (lower is better)
Translates to: SRCISSRSCSCLSIC*KRHCNSDSLFSVKF
Trigger: GAATTTGACTGAAAACAAGGAATCTGAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCAGGAGCAGCTTCTGGATGAAATACATCGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000554728.1
ENST00000555265.6
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCACTGGAAAGCTCCCTGTaGAAATCATCTCCAAGGCGA +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLESSL*KSSPRR
Trigger: TCGCCTTGGAGATGATTTCAACAGGGAGCTTTCCAG...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCAATTCCTGTTCAAGTaGATTCTTCTCAGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNQFLFK*ILLSFS
Trigger: ACTGAAACTGAGAAGAATCAACTTGAACAGGAATTG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATCAAGAAGTTTAGCTTaGTCCTGGGCCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSRSLA*SWAWLF
Trigger: GAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTCAAGAAGTTTAGCTTaGTCCTGGGCCTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYSRSLA*SWAWLF
Trigger: GAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAATGGCACTCAGGTCCTaGATGGACTCTTGCATCTCA +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSMALRS*MDSCIS
Trigger: TGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCAT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATT +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCVLGVI*VMLKRI
Trigger: AATTCTCTTCAGCATCACCAAGATGACACCAAGTAC...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TGTACTTGGTGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTCACCTTTGAAACTTTaGGTTCTGTACTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: CTWCHLGDAEENFCEPCISPLKL*VLYLVS
Trigger: TGACACCAAGTACAGAACCAAAAGTTTCAAAGGTGA...AATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTAGCTACGGTATGCAGTaGTGGACTGTTAAGATGATA +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCSYGMQ*WTVKMI
Trigger: TATCATCTTAACAGTCCACAACTGCATACCGTAGCT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp AGGAAAATCATCCAGGTTCCTGGCTTTGGGGTCCTGAATGAAAGAGAAATGAACCAGATACAGGGAGGATaGATACATATCTATTTCCAA +
Preference number: 5 (lower is better)
Translates to: RKIIQVPGFGVLNEREMNQIQGG*IHIYFQ
Trigger: TTGGAAATAGATATGTATCAATCCTCCCTGTATCTG...GTTCATTTCTCTTTCATTCAGGACCCCAAAGCCAGGAACCTGGATGATTTTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554827.5
CDS-3UTR CAA 90 bp TTACTAAGACAGAAGCAGTATGTCTTATCAATTAATTCCTGCACACAGCCAGTACTCCAAGCAAAGAAGTaGATCCTTGAGCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: LLRQKQYVLSINSCTQPVLQAKK*ILELQS
Trigger: AGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGAG...TACTGGCTGTGTGCAGGAATTAATTGATAAGACATACTGCTTCTGTCTTAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554728.1
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTGCAACTCAGATTCCTaGTTTTCAGTCAAATTCCTG +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCCNSDS*FSVKFL
Trigger: CAGGAATTTGACTGAAAACAAGGAATCTGAGTTGCA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTCACCTTTGAAACTTTaGGTTCTGTACTTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCSPLKL*VLYLVS
Trigger: TGACACCAAGTACAGAACCAAAAGTTTCAAAGGTGA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTAACTTGTTCCATTCATaGTGGCATCTTCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCNLFHS*WHLPCL
Trigger: CAAACAAGGAAGATGCCACAATGAATGGAACAAGTT...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTTTTGGGTTGTGAACTaGTTCCATTCATTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCFWVVN*FHSLWH
Trigger: ATGCCACAATGAATGGAACAAGTTCACAACCCAAAA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS TCA 90 bp CTTGTAACAGAAATACTTCTCCCTCCTGAGTTTCTCAATAAACGTTaGCTCCGGAGTTGGTCGATTGATTGTTCCAAGCTTTCTTTTAAA +
Preference number: 5 (lower is better)
Translates to: LVTEILLPPEFLNKR*LRSWSIDCSKLSFK
Trigger: TTTAAAAGAAAGCTTGGAACAATCAATCGACCAACTCCGGAGTCAACGTTTATTGAGAAACTCAGGAGGGAGAAGTATTTCTGTTACAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
CDS GCA 90 bp TATCAAGGAAAATATTTTCTTTCACAAGTGCCCTTACACAAACACTaGAGAGGCTGCTTAAGAGGTTGTAGCCTTAAACATGGATACTAC +
Preference number: 5 (lower is better)
Translates to: YQGKYFLSQVPLHKH*RGCLRGCSLKHGYY
Trigger: GTAGTATCCATGTTTAAGGCTACAACCTCTTAAGCAGCCTCTGCAGTGTTTGTGTAAGGGCACTTGTGAAAGAAAATATTTTCCTTGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557377.1
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATCCGGAGTTGGTCGATaGATTGTTCCAAGCTTTCTT +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSSGVGR*IVPSFL
Trigger: AAGAAAGCTTGGAACAATCAATCGACCAACTCCGGA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTCAATTCCTGTTCAAGTaGATTCTTCTCAGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCQFLFK*ILLSFS
Trigger: ACTGAAACTGAGAAGAATCAACTTGAACAGGAATTG...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACACAATTCCTGTTCAAGTaGATTCTTCTCAGTTTCAGT +
Preference number: 5 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITQFLFK*ILLSFS
Trigger: ACTGAAACTGAGAAGAATCAACTTGAACAGGAATTG...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATGTCCTTGATGGACTCTaGCATCTCAAGAAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYVLDGL*HLKKFS
Trigger: GCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGAC...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAGTCCTTGATGGACTCTaGCATCTCAAGAAGTTTAGC +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSVLDGL*HLKKFS
Trigger: GCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGAC...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCACATATTCTGTTCGTGTTTaGTTTTCACACTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: DFSHSKPKTVQDMTEVITYSVRV*FSHSAM
Trigger: CATTGCAGAGTGTGAAAACAAAACACGAACAGAATA...TGTGATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTGTCACTTTTGTCAATGTTTGGCAATACCAAAGAGCCAAAGCTGCAGGTATGTTATTCTGTTCGTGTTTaGTTTTCACACTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: LSLLSMFGNTKEPKLQVCYSVRV*FSHSAM
Trigger: CATTGCAGAGTGTGAAAACAAAACACGAACAGAATA...ACATACCTGCAGCTTTGGCTCTTTGGTATTGCCAAACATTGACAAAAGTGACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATCTCCAAGCAAAGAAGTaGATCCTTGAGCTGCAATCT +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYLQAKK*ILELQS
Trigger: AGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGAG...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACCTGCCTTTCTATCTGTaGAAAGAGACACTGCAACTC +
Preference number: 5 (lower is better)
Translates to: HENISSGGKNLVAKFHIYLPFYL*KETLQL
Trigger: GAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCAG...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACACTGCGAACCCTGTATTaGGAATATCTTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTLRTLY*EYLPSV
Trigger: AACTGATGGAAGATATTCCAAATACAGGGTTCGCAG...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTCTGCGAACCCTGTATTaGGAATATCTTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLILRTLY*EYLPSV
Trigger: AACTGATGGAAGATATTCCAAATACAGGGTTCGCAG...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCAAGGTTCTGTCACCTTaGAAACTTTTGGTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIKVLSP*KLLVLY
Trigger: GTACAGAACCAAAAGTTTCAAAGGTGACAGAACCTT...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATTGGCATCTTCCTTGTTaGAAGCTGAATCTGGAGCAA +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYWHLPC*KLNLEQ
Trigger: TTGCTCCAGATTCAGCTTCAAACAAGGAAGATGCCA...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTATTGTGGCATCTTCCTaGTTTGAAGCTGAATCTGGA +
Preference number: 5 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLIIVASS*FEAESG
Trigger: TCCAGATTCAGCTTCAAACAAGGAAGATGCCACAAT...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp TATGATTTTAGTCACAGTAAACCAAAGACGGTCCAGGATATGACTGAAGTGATCTTTTGGGTTGTGAACTaGTTCCATTCATTGTGGCAT +
Preference number: 5 (lower is better)
Translates to: YDFSHSKPKTVQDMTEVIFWVVN*FHSLWH
Trigger: ATGCCACAATGAATGGAACAAGTTCACAACCCAAAA...GATCACTTCAGTCATATCCTGGACCGTCTTTGGTTTACTGTGACTAAAATCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACACACCTTCTGAAGTCTTaGAAATCTTCTAGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTHLLKS*KSSSRL
Trigger: GAGCCTACTAGAAGATTTCAAAGACTTCAGAAGGTG...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACAAATGGAGTCAGTTATaGCTTAAGCCCCCAGCATCT +
Preference number: 5 (lower is better)
Translates to: HENISSGGKNLVAKFHIYKWSQL*LKPPAS
Trigger: AGATGCTGGGGGCTTAAGCAATAACTGACTCCATTT...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TGTCATCTTGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATATCGTGTATACCCTGTATTaGATAGGGCAGAAAAGTATT +
Preference number: 5 (lower is better)
Translates to: CHLGDAEENFCEPCIWNIVYTLY*IGQKSI
Trigger: AATACTTTTCTGCCCTATCAAATACAGGGTATACAC...GATATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp CATGAGAATATTAGCTCTGGAGGAAAGAATTTGGTGGCAAAATTCCATATTTACGGAAAGGTCCTTGCTTaGGCTGATTTTACCAGATTC +
Preference number: 5 (lower is better)
Translates to: HENISSGGKNLVAKFHIYGKVLA*ADFTRF
Trigger: GAATCTGGTAAAATCAGCCAAAGCAAGGACCTTTCC...GTAAATATGGAATTTTGCCACCAAATTCTTTCCTCCAGAGCTAATATTCTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACAAAAACCAAAGGCACATaGTTGGCATTCCTATCACGT +
Preference number: 5 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTKTKGT*LAFLSR
Trigger: ACGTGATAGGAATGCCAACAATGTGCCTTTGGTTTT...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATTCTGCTTTCGTAAGTaGTGTACGCAGTTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSFCFRK*CTQFFY
Trigger: GTAGAAGAACTGCGTACACAACTTACGAAAGCAGAA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCACTGCGAACCCTGTATTaGGAATATCTTCCATCAGTT +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSLRTLY*EYLPSV
Trigger: AACTGATGGAAGATATTCCAAATACAGGGTTCGCAG...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp ACTTCTGTCCTTCAAGCCAAACAGAAGAACTATACTATAGGCCCTGATTTAATTAAGGTTCTGTCACCTTaGAAACTTTTGGTTCTGTAC +
Preference number: 5 (lower is better)
Translates to: TSVLQAKQKNYTIGPDLIKVLSP*KLLVLY
Trigger: GTACAGAACCAAAAGTTTCAAAGGTGACAGAACCTT...AATTAAATCAGGGCCTATAGTATAGTTCTTCTGTTTGGCTTGAAGGACAGAAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556061.5
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCATGGATGATTCTGCCATaGATGTACACAAATCAAAGC +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSWMILP*MYTNQS
Trigger: GCTTTGATTTGTGTACATCAATGGCAGAATCATCCA...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATGTACTTGTTATAGTGTaGACCTTCTCGGTAACTTCT +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYVLVIV*TFSVTS
Trigger: AGAAGTTACCGAGAAGGTCAACACTATAACAAGTAC...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp ATATTTACTCATGAAATCCACCCCCAACTTCCACTCACACATTTTAATAGGACATATTCTGTTCGTGTTTaGTTTTCACACTCTGCAATG +
Preference number: 5 (lower is better)
Translates to: IFTHEIHPQLPLTHFNRTYSVRV*FSHSAM
Trigger: CATTGCAGAGTGTGAAAACAAAACACGAACAGAATA...TGTCCTATTAAAATGTGTGAGTGGAAGTTGGGGGTGGATTTCATGAGTAAATAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000554502.5
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAGAATCTCTGAAGTCTTaGAAATCTTCTAGTAGGCTC +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSESLKS*KSSSRL
Trigger: GAGCCTACTAGAAGATTTCAAAGACTTCAGAGATTC...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAACTTGTTCCATTCATaGTGGCATCTTCCTTGTTTG +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYNLFHS*WHLPCL
Trigger: CAAACAAGGAAGATGCCACAATGAATGGAACAAGTT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp GGTATGCAGTTGTGGACTGTTAAGATGATAGATATAAAAGTCCTGAGCATTTATAACTTTCATCTGGCTTaGGATCTTACTCTGCTTTTT +
Preference number: 5 (lower is better)
Translates to: GMQLWTVKMIDIKVLSIYNFHLA*DLTLLF
Trigger: AAAAAGCAGAGTAAGATCCAAAGCCAGATGAAAGTT...ATAAATGCTCAGGACTTTTATATCTATCATCTTAACAGTCCACAACTGCATACC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS-3UTR CAA 90 bp TTATTTGGATTGGTTTACCATTCACAAGGACCAACAGTATTGTCACTTTTGTCAACAGTATTGTCACTTTaGTCAATGTTTGGCAATACC +
Preference number: 5 (lower is better)
Translates to: LFGLVYHSQGPTVLSLLSTVLSL*SMFGNT
Trigger: GGTATTGCCAAACATTGACAAAAGTGACAATACTGT...TGACAAAAGTGACAATACTGTTGGTCCTTGTGAATGGTAAACCAATCCAAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000281129.7
ENST00000555265.6
CDS GCA 72 bp AGGGCAAAGGGCCTAGTCAAGCCGATGATCTTTGGTTaGCCCTACACTTTCCCCAAACCACGGGGGCGGGGG +
Preference number: 6 (lower is better)
Translates to: RAKGLVKPMIFG*PYTFPKPRGRG
Trigger: CCCCCGCCCCCGTGGTTTGGGGAAAGTGTAGGGGCAACCAAAGATCATCGGCTTGACTAGGCCCTTTGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000555529.5
CDS TCA 72 bp CTGCTTGGTTGCATCCTCCGCATGGCGAGTCAGCTCTaGGATCTGAAGGTCAGCATGCTTACGCTCGGCCTC +
Preference number: 6 (lower is better)
Translates to: LLGCILRMASQL*DLKVSMLTLGL
Trigger: GAGGCCGAGCGTAAGCATGCTGACCTTCAGATCTCAGAGCTGACTCGCCATGCGGAGGATGCAACCAAGCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS TCA 72 bp AGTGCCTCCTGTAGCTGCAGGGACATGAGTCCCAGTTaGTCCTGGCGTCTTTCCACCAGCTCCCTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: SASCSCRDMSPS*SWRLSTSSLSV
Trigger: CACAGAAAGGGAGCTGGTGGAAAGACGCCAGGATCAACTGGGACTCATGTCCCTGCAGCTACAGGAGGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS GCA 72 bp GGTGCAACTGACCAAACGCAGCGACTCAACCGACTGTaGTCTCCCCAGACTCGCAGCTATGGCAACTTGAAC +
Preference number: 6 (lower is better)
Translates to: GATDQTQRLNRL*SPQTRSYGNLN
Trigger: GTTCAAGTTGCCATAGCTGCGAGTCTGGGGAGAGCACAGTCGGTTGAGTCGCTGCGTTTGGTCAGTTGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555265.6
CDS TCA 72 bp CTTGTTTCTTTAGTGCCTCCTGTAGCTGCAGGGACATaGGTCCCAGTTGATCCTGGCGTCTTTCCACCAGCT +
Preference number: 6 (lower is better)
Translates to: LVSLVPPVAAGT*VPVDPGVFPPA
Trigger: AGCTGGTGGAAAGACGCCAGGATCAACTGGGACTCATGTCCCTGCAGCTACAGGAGGCACTAAAGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS TCA 72 bp GATGTACGGGTAAGAGCTGAGGCCGCCATAGAGAGGTaGCCATCTTCACCTGTGTTCAAGAAGCAGCTGACA +
Preference number: 6 (lower is better)
Translates to: DVRVRAEAAIER*PSSPVFKKQLT
Trigger: TGTCAGCTGCTTCTTGAACACAGGTGAAGATGGTCACCTCTCTATGGCGGCCTCAGCTCTTACCCGTACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000554368.1
CDS GCA 72 bp TCTGCTCGGATGGCACTCAGGTCCTTGATGGACTCTTaGATCTCAAGAAGTTTAGCTTTGTCCTGGGCCTGG +
Preference number: 6 (lower is better)
Translates to: SARMALRSLMDS*ISRSLALSWAW
Trigger: CCAGGCCCAGGACAAAGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS TCA 72 bp GCAGCCCATGGACTCAATCGGTCACGACAGCGGAAGTaGTCTGATTCGCTGGATGATTCTGCCATTGATGTA +
Preference number: 6 (lower is better)
Translates to: AAHGLNRSRQRK*SDSLDDSAIDV
Trigger: TACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGACCGATTGAGTCCATGGGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000556981.5
CDS GCA 72 bp GTAACTTCTACTGTAGGAAGACTTCGAGTTCCCCTGTaGGTTGATCTGGCAGCCCATGGACTCAATCGGTCA +
Preference number: 6 (lower is better)
Translates to: VTSTVGRLRVPL*VDLAAHGLNRS
Trigger: TGACCGATTGAGTCCATGGGCTGCCAGATCAACGCACAGGGGAACTCGAAGTCTTCCTACAGTAGAAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000557411.5
CDS CAA 72 bp TCGGCATCTGACCGGCTCCTTCTGGAAAGCTCCCTGTaGAAATCATCTCCAAGGCGAATTTGTTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: SASDRLLLESSL*KSSPRRICSLL
Trigger: CAGCAGTGAACAAATTCGCCTTGGAGATGATTTCAACAGGGAGCTTTCCAGAAGGAGCCGGTCAGATGCCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS CAA 72 bp ATCTGCTCGGATGGCACTCAGGTCCTTGATGGACTCTaGCATCTCAAGAAGTTTAGCTTTGTCCTGGGCCTG +
Preference number: 6 (lower is better)
Translates to: ICSDGTQVLDGL*HLKKFSFVLGL
Trigger: CAGGCCCAGGACAAAGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CAA 90 bp GCACTCAGGTCCTTGATGGACTCTTGCATCTCAAGAAGTTTAGCTTaGTCCTGGGCCTGGCTCTTCTTGAGCTCTGCAATTTCTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ALRSLMDSCISRSLA*SWAWLFLSSAISSS
Trigger: GGAGGAAGAAATTGCAGAGCTCAAGAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 72 bp GGCTCTCTCTTCCTCAGCCAATTTATTAGCAAGATCTaGTCGGATGGCACTCAGGTCCTTGATGGACTCTTG +
Preference number: 6 (lower is better)
Translates to: GSLFLSQFISKI*SDGTQVLDGLL
Trigger: CAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTTGCTAATAAATTGGCTGAGGAAGAGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 72 bp CCAAAAGTAGATGTGAGGCTGTCAGCTCATTACTGCTaGTACTTCAGTCTAGGTGTCATCTCCTCACTGGGG +
Preference number: 6 (lower is better)
Translates to: PKVDVRLSAHYC*YFSLGVISSLG
Trigger: CCCCAGTGAGGAGATGACACCTAGACTGAAGTAGCAGCAGTAATGAGCTGACAGCCTCACATCTACTTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556981.5
CDS GCA 72 bp AGGGCAAAGGGCCTAGTCAAGCCGATGATCTTTGGTTaGCCCTACACTTTCCCCAAACCACCTAAGATCATA +
Preference number: 6 (lower is better)
Translates to: RAKGLVKPMIFG*PYTFPKPPKII
Trigger: TATGATCTTAGGTGGTTTGGGGAAAGTGTAGGGGCAACCAAAGATCATCGGCTTGACTAGGCCCTTTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556981.5
CDS CCA 72 bp TGTCCATTACTGTATTCTCGGTATCGTCCAAGCATCTaGTCCACTTGTCGCAGGTTCCGACTGGTATCCTGT +
Preference number: 6 (lower is better)
Translates to: CPLLYSRYRPSI*STCRRFRLVSC
Trigger: ACAGGATACCAGTCGGAACCTGCGACAAGTGGACCAGATGCTTGGACGATACCGAGAATACAGTAATGGACA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000557411.5
CDS CCA 72 bp TCTAGTAGGCTCAGTTTCTCAGGCACAGACTCCAGATaGTCCAAGGCCACTTGGGTACTCGTTTCTAATGCA +
Preference number: 6 (lower is better)
Translates to: SSRLSFSGTDSR*SKATWVLVSNA
Trigger: TGCATTAGAAACGAGTACCCAAGTGGCCTTGGACCATCTGGAGTCTGTGCCTGAGAAACTGAGCCTACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
ENST00000556061.5
CDS CCA 72 bp TCAATCGGTCACGACAGCGGAAGTGATCTGATTCGCTaGATGATTCTGCCATTGATGTACACAAATCGGGGG +
Preference number: 6 (lower is better)
Translates to: SIGHDSGSDLIR*MILPLMYTNRG
Trigger: CCCCCGATTTGTGTACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGACCGATTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556042.5
CDS CAA 90 bp CTTTTTGTTTCGGCATCTGACCGGCTCCTTCTGGAAAGCTCCCTGTaGAAATCATCTCCAAGGCGAATTTGTTCACTGCTGAGGTCTCGA +
Preference number: 6 (lower is better)
Translates to: LFVSASDRLLLESSL*KSSPRRICSLLRSR
Trigger: TCGAGACCTCAGCAGTGAACAAATTCGCCTTGGAGATGATTTCAACAGGGAGCTTTCCAGAAGGAGCCGGTCAGATGCCGAAACAAAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS CAA 90 bp ATTAGCAAGATCTGCTCGGATGGCACTCAGGTCCTTGATGGACTCTaGCATCTCAAGAAGTTTAGCTTTGTCCTGGGCCTGGCTCTTCTT +
Preference number: 6 (lower is better)
Translates to: ISKICSDGTQVLDGL*HLKKFSFVLGLALL
Trigger: AAGAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGACCTGAGTGCCATCCGAGCAGATCTTGCTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS TCA 72 bp TCAGCATGCTTACGCTCGGCCTCACATGTGTCAAAGTaGTTCTGGATCTCCTTAAGTCGATCCAACATCTGC +
Preference number: 6 (lower is better)
Translates to: SACLRSASHVSK*FWISLSRSNIC
Trigger: GCAGATGTTGGATCGACTTAAGGAGATCCAGAATCACTTTGACACATGTGAGGCCGAGCGTAAGCATGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CAA 90 bp TTTGCCTGTGCAGTGAGGTCAGAAAGGTCCTTAAGCACTGCTTTCTaGGCTCTCTCTTCCTCAGCCAATTTATTAGCAAGATCTGCTCGG +
Preference number: 6 (lower is better)
Translates to: FACAVRSERSLSTAF*ALSSSANLLARSAR
Trigger: CCGAGCAGATCTTGCTAATAAATTGGCTGAGGAAGAGAGAGCCAAGAAAGCAGTGCTTAAGGACCTTTCTGACCTCACTGCACAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CAA 90 bp GCTCCTTCTGGAAAGCTCCCTGTTGAAATCATCTCCAAGGCGAATTaGTTCACTGCTGAGGTCTCGAAGAGACTGATGAAAACCATGAAG +
Preference number: 6 (lower is better)
Translates to: APSGKLPVEIISKAN*FTAEVSKRLMKTMK
Trigger: CTTCATGGTTTTCATCAGTCTCTTCGAGACCTCAGCAGTGAACAAATTCGCCTTGGAGATGATTTCAACAGGGAGCTTTCCAGAAGGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS GCA 72 bp ACACCAAAAGTAGATGTGAGGCTGTCAGCTCATTACTaGTGCTACTTCAGTCTAGGTGTCATCTCCTCACTG +
Preference number: 6 (lower is better)
Translates to: TPKVDVRLSAHY*CYFSLGVISSL
Trigger: CAGTGAGGAGATGACACCTAGACTGAAGTAGCAGCAGTAATGAGCTGACAGCCTCACATCTACTTTTGGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556981.5
CDS CCA 72 bp TCTTGCATCTCAAGAAGTTTAGCTTTGTCCTGGGCCTaGCTCTTCTTGAGCTCTGCAATTTCTTCCTCCAAG +
Preference number: 6 (lower is better)
Translates to: SCISRSLALSWA*LFLSSAISSSK
Trigger: CTTGGAGGAAGAAATTGCAGAGCTCAAGAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGAGATGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CAA 72 bp TCCTTGATGGACTCTTGCATCTCAAGAAGTTTAGCTTaGTCCTGGGCCTGGCTCTTCTTGAGCTCTGCAATT +
Preference number: 6 (lower is better)
Translates to: SLMDSCISRSLA*SWAWLFLSSAI
Trigger: AATTGCAGAGCTCAAGAAGAGCCAGGCCCAGGACAAAGCTAAACTTCTTGAGATGCAAGAGTCCATCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CCA 72 bp TCAATCGGTCACGACAGCGGAAGTGATCTGATTCGCTaGATGATTCTGCCATTGATGTACACAAATCAAAGC +
Preference number: 6 (lower is better)
Translates to: SIGHDSGSDLIR*MILPLMYTNQS
Trigger: GCTTTGATTTGTGTACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCTGTCGTGACCGATTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556981.5
CDS CAA 72 bp AGCGGAAGTGATCTGATTCGCTGGATGATTCTGCCATaGATGTACACAAATCAAAGCACACCCCCAAAACTC +
Preference number: 6 (lower is better)
Translates to: SGSDLIRWMILP*MYTNQSTPPKL
Trigger: GAGTTTTGGGGGTGTGCTTTGATTTGTGTACATCAATGGCAGAATCATCCAGCGAATCAGATCACTTCCGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556981.5
CDS CAA 72 bp GGAAAGCTCCCTGTTGAAATCATCTCCAAGGCGAATTaGTTCACTGCTGAGGTCTCGAAGAGACTGATGAAA +
Preference number: 6 (lower is better)
Translates to: GKLPVEIISKAN*FTAEVSKRLMK
Trigger: TTTCATCAGTCTCTTCGAGACCTCAGCAGTGAACAAATTCGCCTTGGAGATGATTTCAACAGGGAGCTTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS CAA 72 bp GCAGTGAGGTCAGAAAGGTCCTTAAGCACTGCTTTCTaGGCTCTCTCTTCCTCAGCCAATTTATTAGCAAGA +
Preference number: 6 (lower is better)
Translates to: AVRSERSLSTAF*ALSSSANLLAR
Trigger: TCTTGCTAATAAATTGGCTGAGGAAGAGAGAGCCAAGAAAGCAGTGCTTAAGGACCTTTCTGACCTCACTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CAA 72 bp AAGAATGGATTCCTGTTCAGTCTCCAAGCAAAGAAGTaGATCCTTGAGCTGCAATCTGGCCTCTTCCATCCT +
Preference number: 6 (lower is better)
Translates to: KNGFLFSLQAKK*ILELQSGLFHP
Trigger: AGGATGGAAGAGGCCAGATTGCAGCTCAAGGATCAACTTCTTTGCTTGGAGACTGAACAGGAATCCATTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000554728.1
ENST00000555265.6
CDS CAA 90 bp TCCCTCCTGAGTTTCTCAATAAACGTTGACTCCGGAGTTGGTCGATaGATTGTTCCAAGCTTTCTTTTAAATGTTCTATCGCACCCGCCT +
Preference number: 6 (lower is better)
Translates to: SLLSFSINVDSGVGR*IVPSFLLNVLSHPP
Trigger: AGGCGGGTGCGATAGAACATTTAAAAGAAAGCTTGGAACAATCAATCGACCAACTCCGGAGTCAACGTTTATTGAGAAACTCAGGAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
CDS CAA 90 bp GAGACACTGCAACTCAGATTCCTTGTTTTCAGTCAAATTCCTGAGTaGTTGTCTGCAGAGCATCAGCTGGTGTCGCAGATTTTTCTCTCT +
Preference number: 6 (lower is better)
Translates to: ETLQLRFLVFSQIPE*LSAEHQLVSQIFLS
Trigger: AGAGAGAAAAATCTGCGACACCAGCTGATGCTCTGCAGACAACAACTCAGGAATTTGACTGAAAACAAGGAATCTGAGTTGCAGTGTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000554728.1
ENST00000555265.6
CDS TCA 72 bp GTTCGTGTTTTGTTTTCACACTCTGCAATGATGATGTaGGATCTTTCAGCTCCCTCTGGTGCACATCTCGTT +
Preference number: 6 (lower is better)
Translates to: VRVLFSHSAMMM*DLSAPSGAHLV
Trigger: AACGAGATGTGCACCAGAGGGAGCTGAAAGATCTCACATCATCATTGCAGAGTGTGAAAACAAAACACGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 72 bp TCTCTGAGCTCAACGCTCTTTTTAGGCACATATGTCTaGCTCCTATCATTTCTTCATGAGGTTCAGGGCAAA +
Preference number: 6 (lower is better)
Translates to: SLSSTLFLGTYV*LLSFLHEVQGK
Trigger: TTTGCCCTGAACCTCATGAAGAAATGATAGGAGGCAGACATATGTGCCTAAAAAGAGCGTTGAGCTCAGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556981.5
ENST00000557411.5
CDS GCA 72 bp TGCAATGATGATGTGAGATCTTTCAGCTCCCTCTGGTaGACATCTCGTTCCAGCTTTAACTGTGTGATGATT +
Preference number: 6 (lower is better)
Translates to: CNDDVRSFSSLW*TSRSSFNCVMI
Trigger: AATCATCACACAGTTAAAGCTGGAACGAGATGTGCACCAGAGGGAGCTGAAAGATCTCACATCATCATTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 72 bp CTTTCACAAGTGCCCTTACACAAACACTGCAGAGGCTaGTTAAGAGGTTGTAGCCTTAAACATGGATACTAC +
Preference number: 6 (lower is better)
Translates to: LSQVPLHKHCRG*LRGCSLKHGYY
Trigger: GTAGTATCCATGTTTAAGGCTACAACCTCTTAAGCAGCCTCTGCAGTGTTTGTGTAAGGGCACTTGTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557377.1
CDS CAA 72 bp AAAAGACATAAAGACAGTGGCAAGGAGGATCTGCCCTaGAGAATAATGGAGAGGGAGGTAGTATGTCCTGAA +
Preference number: 6 (lower is better)
Translates to: KRHKDSGKEDLP*RIMEREVVCPE
Trigger: TTCAGGACATACTACCTCCCTCTCCATTATTCTCAAGGGCAGATCCTCCTTGCCACTGTCTTTATGTCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556800.1
CDS CAA 90 bp ACACTGCAACTCAGATTCCTTGTTTTCAGTCAAATTCCTGAGTTGTaGTCTGCAGAGCATCAGCTGGTGTCGCAGATTTTTCTCTCTGTT +
Preference number: 6 (lower is better)
Translates to: TLQLRFLVFSQIPEL*SAEHQLVSQIFLSV
Trigger: AACAGAGAGAAAAATCTGCGACACCAGCTGATGCTCTGCAGACAACAACTCAGGAATTTGACTGAAAACAAGGAATCTGAGTTGCAGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000554728.1
ENST00000555265.6
CDS TCA 72 bp GAAATACTTCTCCCTCCTGAGTTTCTCAATAAACGTTaGCTCCGGAGTTGGTCGATTGATTGTTCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: EILLPPEFLNKR*LRSWSIDCSKL
Trigger: AAGCTTGGAACAATCAATCGACCAACTCCGGAGTCAACGTTTATTGAGAAACTCAGGAGGGAGAAGTATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
CDS TCA 72 bp ATCATCAGTCTCTTGAACAAACCGGACACCAGTTCTTaGTCTCATTCGTTTAATACCCTGTGGATCCCCATA +
Preference number: 6 (lower is better)
Translates to: IISLLNKPDTSS*SHSFNTLWIPI
Trigger: TATGGGGATCCACAGGGTATTAAACGAATGAGATCAAGAACTGGTGTCCGGTTTGTTCAAGAGACTGATGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
ENST00000555529.5
CDS GCA 72 bp GCAGTTCTTCTACCTGATGCAAAAGTGTTTCTCGGCTaGCTTCTGATTGATTCAATAACCTTCGAGATAGCT +
Preference number: 6 (lower is better)
Translates to: AVLLPDAKVFLG*LLIDSITFEIA
Trigger: AGCTATCTCGAAGGTTATTGAATCAATCAGAAGGCAGCCGAGAAACACTTTTGCATCAGGTAGAAGAACTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554827.5
ENST00000555265.6
CDS GCA 72 bp TTCTGGATCTCCTTAAGTCGATCCAACATCTGCAGTTaGTGTTTTTCCCCATTCTCCAGTTCACGTGTTAAA +
Preference number: 6 (lower is better)
Translates to: FWISLSRSNICS*CFSPFSSSRVK
Trigger: TTTAACACGTGAACTGGAGAATGGGGAAAAACAGCAACTGCAGATGTTGGATCGACTTAAGGAGATCCAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CCA 72 bp CCTCCCCTTGTTCATCCTGATAGTTTGACTGTTGCTTaGAAATCTGAGATACTTGATGCTGTAAACCCTTTC +
Preference number: 6 (lower is better)
Translates to: PPLVHPDSLTVA*KSEILDAVNPF
Trigger: GAAAGGGTTTACAGCATCAAGTATCTCAGATTTCCAAGCAACAGTCAAACTATCAGGATGAACAAGGGGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554502.5
ENST00000554827.5
ENST00000555265.6
CDS CAA 72 bp GCTCATTTTATAGATGAGGACTCAGAAAGTTGCCATTaGTTGCCTCTGTGCATGAGAAGATCCTTCCTTCTC +
Preference number: 6 (lower is better)
Translates to: AHFIDEDSESCH*LPLCMRRSFLL
Trigger: GAGAAGGAAGGATCTTCTCATGCACAGAGGCAACAAATGGCAACTTTCTGAGTCCTCATCTATAAAATGAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000554368.1
ENST00000555529.5
ENST00000556042.5
ENST00000556800.1
ENST00000556981.5
CDS GCA 72 bp GCTTTCTCAACTTTCATCTGGCTTTGGATCTTACTCTaGTTTTTCAATTCGCTCTCCAGTCTATGGATGGTA +
Preference number: 6 (lower is better)
Translates to: AFSTFIWLWILL*FFNSLSSLWMV
Trigger: TACCATCCATAGACTGGAGAGCGAATTGAAAAAGCAGAGTAAGATCCAAAGCCAGATGAAAGTTGAGAAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS CAA 72 bp GGTTGTGAACTTGTTCCATTCATTGTGGCATCTTCCTaGTTTGAAGCTGAATCTGGAGCAACAGTTCTTTTG +
Preference number: 6 (lower is better)
Translates to: GCELVPFIVASS*FEAESGATVLL
Trigger: CAAAAGAACTGTTGCTCCAGATTCAGCTTCAAACAAGGAAGATGCCACAATGAATGGAACAAGTTCACAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000553717.1
ENST00000555265.6
ENST00000556061.5
CDS CAA 90 bp CTCACGATGTATTTCATCCAGAAGCTGCTCCTGCCTTTCTATCTGTaGAAAGAGACACTGCAACTCAGATTCCTTGTTTTCAGTCAAATT +
Preference number: 6 (lower is better)
Translates to: LTMYFIQKLLLPFYL*KETLQLRFLVFSQI
Trigger: AATTTGACTGAAAACAAGGAATCTGAGTTGCAGTGTCTCTTTCAACAGATAGAAAGGCAGGAGCAGCTTCTGGATGAAATACATCGTGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000554728.1
ENST00000555265.6
CDS CAA 72 bp TTCCGACTGGTATCCTGTAAAGTACTTGTTATAGTGTaGACCTTCTCGGTAACTTCTACTGTAGGAAGACTT +
Preference number: 6 (lower is better)
Translates to: FRLVSCKVLVIV*TFSVTSTVGRL
Trigger: AAGTCTTCCTACAGTAGAAGTTACCGAGAAGGTCAACACTATAACAAGTACTTTACAGGATACCAGTCGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000216517.10
ENST00000281129.7
ENST00000554298.5
ENST00000555265.6
ENST00000555529.5
ENST00000556042.5
ENST00000557411.5
CDS CAA 72 bp TACTTTGAAACTTTTGGTTCTGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTA +
Preference number: 6 (lower is better)
Translates to: YFETFGSVLGVI*VMLKRISANPV
Trigger: TACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACAGAACCAAAAGTTTCAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557377.1
CDS TCA 72 bp TTCTCTTCTAAACTTTCAGCCTTCAGAGTCCTGATATaGTTCTCAGCCTCACTCTTTTCTTTCTTAAAGTGC +
Preference number: 6 (lower is better)
Translates to: FSSKLSAFRVLI*FSASLFSFLKC
Trigger: GCACTTTAAGAAAGAAAAGAGTGAGGCTGAGAATCATATCAGGACTCTGAAGGCTGAAAGTTTAGAAGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000281129.7
ENST00000554502.5
ENST00000555265.6
CDS GCA 72 bp AAATATTTTCTTTCACAAGTGCCCTTACACAAACACTaGAGAGGCTGCTTAAGAGGTTGTAGCCTTAAACAT +
Preference number: 6 (lower is better)
Translates to: KYFLSQVPLHKH*RGCLRGCSLKH
Trigger: ATGTTTAAGGCTACAACCTCTTAAGCAGCCTCTGCAGTGTTTGTGTAAGGGCACTTGTGAAAGAAAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557377.1
CDS CAA 90 bp AAAGAAAATTACTTTGAAACTTTTGGTTCTGTACTTGGTGTCATCTaGGTGATGCTGAAGAGAATTTCTGCGAACCCTGTATTTGGAATA +
Preference number: 6 (lower is better)
Translates to: KENYFETFGSVLGVI*VMLKRISANPVFGI
Trigger: TATTCCAAATACAGGGTTCGCAGAAATTCTCTTCAGCATCACCAAGATGACACCAAGTACAGAACCAAAAGTTTCAAAGTAATTTTCTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557377.1
CDS TCA 72 bp TCCTTGACAACTACATGTACTATCATCCAATCTGCATaGAGTTATGTGTGGGTCATATTTCTCCAAAAATTA +
Preference number: 6 (lower is better)
Translates to: SLTTTCTIIQSA*SYVWVIFLQKL
Trigger: TAATTTTTGGAGAAATATGACCCACACATAACTTCATGCAGATTGGATGATAGTACATGTAGTTGTCAAGGA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000554298.5