RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP126 (Homo sapiens)

Ensembl gene IDs: ENSG00000110318

Ensembl transcript IDs: ENST00000263468.13, ENST00000532077.1, ENST00000532529.1, ENST00000670091.1, ENST00000670318.1

Found 600 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAGCCATAGGAAGGCCTCCCTTCACCATACAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAAC +
Preference number: 1 (lower is better)
Translates to: TAIGRPPFTIQKGNL*SIAATKGHFVGCGN
Trigger: GTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTGTATGGTGAAGGGAGGCCTTCCTATGGCTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR GCA 90 bp GAGTCACAGACGGATAACTTTCTTCACAAACAGGACTTCTTTGGGTaGAATATAATGTCGCATCTTGCCGGGCAACTGCTTGAGTGCCAT +
Preference number: 1 (lower is better)
Translates to: ESQTDNFLHKQDFFG*NIMSHLAGQLLECH
Trigger: ATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCACCCAAAGAAGTCCTGTTTGTGAAGAAAGTTATCCGTCTGTGACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 90 bp TTTGGCACTCTGAAGAACAATATGATGGCAGTGATGGTATCACAGTaGCTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCT +
Preference number: 1 (lower is better)
Translates to: FGTLKNNMMAVMVSQ*LGQNKHLRVENYFP
Trigger: AGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAGTCACTGTGATACCATCACTGCCATCATATTGTTCTTCAGAGTGCCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR GCA 90 bp TTTGGGTGCAATATAATGTCGCATCTTGCCGGGCAACTGCTTGAGTaGCATTTGAATGATTTATTTTTGCGAAAGTTTGGCACTCTGAAG +
Preference number: 1 (lower is better)
Translates to: FGCNIMSHLAGQLLE*HLNDLFLRKFGTLK
Trigger: CTTCAGAGTGCCAAACTTTCGCAAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCACCCAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR GCA 90 bp GAGAATGCCAGTTTATCTTCATCAAAGCAGCTGAGATTAGTTGATTaGATATTTGCTGGTTTGAGGGAAATGGTATTCCGCTGGATGGAT +
Preference number: 1 (lower is better)
Translates to: ENASLSSSKQLRLVD*IFAGLREMVFRWMD
Trigger: ATCCATCCAGCGGAATACCATTTCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCATTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGC +
Preference number: 1 (lower is better)
Translates to: LWKNVCLLYSQASSL*HVFRARLCPAFCLG
Trigger: GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 90 bp TCTGGAAATGTAGCCACTTCCTGGGTTAGAGAATCTGAAGTGCTTTaGGATTTGCTAAATTTAAATGTTGGGCTCTCAGTAACTAATGGT +
Preference number: 1 (lower is better)
Translates to: SGNVATSWVRESEVL*DLLNLNVGLSVTNG
Trigger: ACCATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAGGAAGTGGCTACATTTCCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 90 bp TTTAGAGAATGCCAGTTTATCTTCATCAAAGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTTGAGGGAAATGGTATTCCGCTGGAT +
Preference number: 1 (lower is better)
Translates to: FRECQFIFIKAAEIS*LHICWFEGNGIPLD
Trigger: ATCCAGCGGAATACCATTTCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCATTCTCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 90 bp TTAGTTGATTGCATATTTGCTGGTTTGAGGGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCCTTATTAAGTGTTAAATATATTTCT +
Preference number: 1 (lower is better)
Translates to: LVDCIFAGLREMVFR*MDVECSLLSVKYIS
Trigger: AGAAATATATTTAACACTTAATAAGGAGCATTCCACATCCATCCAGCGGAATACCATTTCCCTCAAACCAGCAAATATGCAATCAACTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTCAGGCTGGTGTGCAGTaGCGAAACACAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSQAGVQ*RNTAHC
Trigger: GCAGTGAGCTGTGTTTCGCCACTGCACACCAGCCTG...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTCTCAAGCAGTCCTCCTaGCTTGGCCTCCAAAGTGCT +
Preference number: 2 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSLKQSS*LGLQSA
Trigger: AGCACTTTGGAGGCCAAGGCAGGAGGACTGCTTGAG...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263468.13
3UTR-3UTR TCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTCTTCGAGGAGTTTCTaGGTTTCCTCCAGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSSSRSF*VSSSLS
Trigger: GCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp AGAGAACTGAGGCTGGTGGATGATCTGCAAAGGCCTCGGGCTGATTaGACAATGCTGTGGCTTGTGGAACAGATTGCTGGACTGACTGAA +
Preference number: 2 (lower is better)
Translates to: RELRLVDDLQRPRAD*TMLWLVEQIAGLTE
Trigger: TTCAGTCAGTCCAGCAATCTGTTCCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGCAGATCATCCACCAGCCTCAGTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR CCA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACACAGGCTGGTGTGCAGTaGCGAAACACAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTQAGVQ*RNTAHC
Trigger: GCAGTGAGCTGTGTTTCGCCACTGCACACCAGCCTG...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTCTACTAACATGGTGTaGCAGAAAGAACATGGGTTT +
Preference number: 2 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSSTNMV*QKEHGF
Trigger: AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCCAGGCTGGTGTGCAGTaGCGAAACACAGCTCACTGC +
Preference number: 2 (lower is better)
Translates to: GKYMKGLLRRILLELSLVQAGVQ*RNTAHC
Trigger: GCAGTGAGCTGTGTTTCGCCACTGCACACCAGCCTG...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCCACTGTCACCCAGGCTaGTGTGCAGTGGCGAAACAC +
Preference number: 2 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGHCHPG*CAVAKH
Trigger: GTGTTTCGCCACTGCACACCAGCCTGGGTGACAGTG...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCGCAAAGGCCTCGGGCTaGTTTGACAATGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFAKASG*FDNAVA
Trigger: AGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGC...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR TCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGTGCAAGGGAGAGAACTaGGGCTGGTGGATGATCTGC +
Preference number: 2 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKCKGEN*GWWMIC
Trigger: GCAGATCATCCACCAGCCTCAGTTCTCTCCCTTGCA...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR GCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTCTGTCTACCTCGGCCTaGAAAGTGCTGGGATTACAG +
Preference number: 2 (lower is better)
Translates to: AQFLISKVETKIPMVWVALSTSA*KVLGLQ
Trigger: CTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAG...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGCTGTCTACCTCGGCCTaGAAAGTGCTGGGATTACAG +
Preference number: 2 (lower is better)
Translates to: FLISKVETKIPMVWVAGQLSTSA*KVLGLQ
Trigger: CTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAG...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTGGCCTCGGGCTGATTTaGCAATGCTGTGGCTTGTGG +
Preference number: 2 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPGLGLI*QCCGLW
Trigger: CCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCC...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR GCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTACGAAACACAGCTCACTaGAGCCTCAACCTCCCAGGT +
Preference number: 2 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLRNTAH*SLNLPG
Trigger: ACCTGGGAGGTTGAGGCTGCAGTGAGCTGTGTTTCG...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTACTGTTGCCAGGCTGGTaGAGTGGTGCAATCTCAGCT +
Preference number: 2 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLLLPGW*SGAISA
Trigger: AGCTGAGATTGCACCACTGCACCAGCCTGGCAACAG...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263468.13
3UTR-3UTR CCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTCAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGG +
Preference number: 2 (lower is better)
Translates to: VTFALLLPPRAILWDVVTQASSL*HVFRAR
Trigger: CCTAGCTCTGAATACATGCCACAAGGATGAAGCTTG...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTGGCTGGTGGATGATCTaGAAAGGCCTCGGGCTGATT +
Preference number: 2 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPGWWMI*KGLGLI
Trigger: AATCAGCCCGAGGCCTTTGCAGATCATCCACCAGCC...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: VTFALLLPPRAILWDVVTAAEIS*LHICWF
Trigger: AAACCAGCAAATATGCAATCAACTAATCTCAGCTGC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGATGGTCTCTCTCTTTTaGATGCTCCAGAAGTGGAGT +
Preference number: 2 (lower is better)
Translates to: FLISKVETKIPMVWVAGQMVSLF*MLQKWS
Trigger: ACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCAT...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: LYSQASSLWHVFRARLCPVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: AQFLISKVETKIPMVWVAVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCAGTTCAAAGGCATATaGTCTGCTCCAGATCCTCCT +
Preference number: 2 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLQFKGI*SAPDPP
Trigger: AGGAGGATCTGGAGCAGACCATATGCCTTTGAACTG...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCCAGTTCAAAGGCATATaGTCTGCTCCAGATCCTCCT +
Preference number: 2 (lower is better)
Translates to: GKYMKGLLRRILLELSLVQFKGI*SAPDPP
Trigger: AGGAGGATCTGGAGCAGACCATATGCCTTTGAACTG...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTCTTCGAGGAGTTTCTaGGTTTCCTCCAGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: KRLFALLTSFILVACIQSSSRSF*VSSSLS
Trigger: GCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGA...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGTCAGAACAAGCATTTaGGAGTGGAGAACTACTTTC +
Preference number: 2 (lower is better)
Translates to: LYSQASSLWHVFRARLCPVRTSI*EWRTTF
Trigger: GAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGAC...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGTAGCCCTCTTATTTTaGTGCAGGACATTAGGACCT +
Preference number: 2 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGVALLF*CRTLGP
Trigger: AGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTAC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: LLYSQASSLWHVFRARLCVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: VTFALLLPPRAILWDVVTGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTAGACAAAAATACCCATaGTTTGGGTGGCTGGTCAGA +
Preference number: 2 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLRQKYP*FGWLVR
Trigger: TCTGACCAGCCACCCAAACCATGGGTATTTTTGTCT...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTGTAGCTATGTGGCCTTaGCTCAGTTTCTCATCTCTA +
Preference number: 2 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFVAMWP*LSFSSL
Trigger: TAGAGATGAGAAACTGAGCCAAGGCCACATAGCTAC...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGATTCACAAACAACTTaGCACACTCTTCTGGCCTGT +
Preference number: 2 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGDSQTT*HTLLAC
Trigger: ACAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAATC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGTGGTATTCCGCTGGATaGATGTGGAATGCTCCTTAT +
Preference number: 2 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKWYSAG*MWNAPY
Trigger: ATAAGGAGCATTCCACATCCATCCAGCGGAATACCA...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 2 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 2 (lower is better)
Translates to: LFFAEGLADCILDGKTKGEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp CATCTTGCCGGGCAACTGCTTGAGTGCCATTTGAATGATTTATTTTaGCGAAAGTTTGGCACTCTGAAGAACAATATGATGGCAGTGATG +
Preference number: 2 (lower is better)
Translates to: HLAGQLLECHLNDLF*RKFGTLKNNMMAVM
Trigger: CATCACTGCCATCATATTGTTCTTCAGAGTGCCAAACTTTCGCAAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGCATATTTGCTGGTTTaGGGGAAATGGTATTCCGCT +
Preference number: 2 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLAYLLV*GKWYSA
Trigger: AGCGGAATACCATTTCCCTCAAACCAGCAAATATGC...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAATGGTCTCTCTCTTTTaGATGCTCCAGAAGTGGAGT +
Preference number: 2 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLMVSLF*MLQKWS
Trigger: ACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCAT...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTGTCAGAACAAGCATTTaGGAGTGGAGAACTACTTTC +
Preference number: 2 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFVRTSI*EWRTTF
Trigger: GAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGAC...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTCAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAG +
Preference number: 2 (lower is better)
Translates to: LVFTKRYASSPREVHERSQKGNL*SIAATK
Trigger: CTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTG...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTCTTTGGCATGCAGGATaGTGCTGTGTACATATATAC +
Preference number: 2 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFLWHAG*CCVHIY
Trigger: GTATATATGTACACAGCAGCATCCTGCATGCCAAAG...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
3UTR-3UTR GCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTCTCTCTCTTTTGAATaGTCCAGAAGTGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFSLSFE*SRSGVS
Trigger: ACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTCAGGACTTCTTTGGGTaGAATATAATGTCGCATCTT +
Preference number: 2 (lower is better)
Translates to: LYSQASSLWHVFRARLCPQDFFG*NIMSHL
Trigger: AAGATGCGACATTATATTGCACCCAAAGAAGTCCTG...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTAAAATACCCATGGTTTaGGTGGCTGGTCAGATTAAA +
Preference number: 2 (lower is better)
Translates to: AQFLISKVETKIPMVWVAKIPMV*VAGQIK
Trigger: TTTAATCTGACCAGCCACCCAAACCATGGGTATTTT...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGAAAATACCCATGGTTTaGGTGGCTGGTCAGATTAAA +
Preference number: 2 (lower is better)
Translates to: FLISKVETKIPMVWVAGQKIPMV*VAGQIK
Trigger: TTTAATCTGACCAGCCACCCAAACCATGGGTATTTT...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGTCTACTAACATGGTGTaGCAGAAAGAACATGGGTTT +
Preference number: 2 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLSTNMV*QKEHGF
Trigger: AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGA...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTATTTTCAGGAGTTACTaGTTGACACTGAGACACTTG +
Preference number: 2 (lower is better)
Translates to: AQFLISKVETKIPMVWVAIFRSY*LTLRHL
Trigger: CAAGTGTCTCAGTGTCAACCAGTAACTCCTGAAAAT...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGTTAGACGGATTCTGCTaGAATTATCTCTTGTCTCTG +
Preference number: 2 (lower is better)
Translates to: FLISKVETKIPMVWVAGQLDGFC*NYLLSL
Trigger: CAGAGACAAGAGATAATTCCAGCAGAATCCGTCTAA...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTGATTTGACAATGCTGTaGCTTGTGGAACAGATTGCT +
Preference number: 2 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLDLTML*LVEQIA
Trigger: AGCAATCTGTTCCACAAGCCACAGCATTGTCAAATC...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR CAA 90 bp CTGAGTTTGAATTTTGATTCTGTCACTGTAGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATG +
Preference number: 2 (lower is better)
Translates to: LSLNFDSVTVGSYVA*AQFLISKVETKIPM
Trigger: CATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGCCAAGGCCACATAGCTACCTACAGTGACAGAATCAAAATTCAAACTCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCAAGACTGTCTATACTTaGGAGGGTTTCAGAATTGGT +
Preference number: 2 (lower is better)
Translates to: GKYMKGLLRRILLELSLVKTVYT*EGFRIG
Trigger: ACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTT...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGTATCTGAGAAAGCTGTaGCATTCTGAGTATTTGAAG +
Preference number: 2 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLYLRKL*HSEYLK
Trigger: CTTCAAATACTCAGAATGTCACAGCTTTCTCAGATA...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGTATCTGAGAAAGCTGTaGCATTCTGAGTATTTGAAG +
Preference number: 2 (lower is better)
Translates to: FLISKVETKIPMVWVAGQYLRKL*HSEYLK
Trigger: CTTCAAATACTCAGAATGTCACAGCTTTCTCAGATA...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTGTACATATAAAGCCTaGTTGGACTTTTGCAGATCC +
Preference number: 2 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDCTYKA*LDFCRS
Trigger: GGATCTGCAAAAGTCCAATCAGGCTTTATATGTACA...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCACCACTTCTAATATTTaGTGTAGATTGAGGAGGAGG +
Preference number: 2 (lower is better)
Translates to: GKYMKGLLRRILLELSLVTTSNI*CRLRRR
Trigger: CCTCCTCCTCAATCTACATCAAATATTAGAAGTGGT...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATAAACAGTATACAGGCTaGAGAAAAGGATGTGGAAGT +
Preference number: 2 (lower is better)
Translates to: LADCILDGKTKGVATGTHKQYTG*RKGCGS
Trigger: ACTTCCACATCCTTTTCTTCAGCCTGTATACTGTTT...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR GCA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 2 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCCCATTTCTACTAACATaGTGTGGCAGAAAGAACATG +
Preference number: 2 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGPFLLT*CGRKNM
Trigger: CATGTTCTTTCTGCCACACCATGTTAGTAGAAATGG...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 2 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTCAGAATATTTCTCTTaGTCTGGAAATGTAGCCACT +
Preference number: 2 (lower is better)
Translates to: AQFLISKVETKIPMVWVASEYFS*SGNVAT
Trigger: AGTGGCTACATTTCCAGACCAAGAGAAATATTCTGA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTGCTCTACCTCTTTGTaGCTTACCTTGCTTAGTTTT +
Preference number: 2 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDCSTSL*LTLLSF
Trigger: AAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCA...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCCATATAAAGCCTGATTaGACTTTTGCAGATCCTGGT +
Preference number: 2 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGHIKPD*TFADPG
Trigger: ACCAGGATCTGCAAAAGTCCAATCAGGCTTTATATG...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTATTTTCAGGAGTTACTaGTTGACACTGAGACACTTG +
Preference number: 2 (lower is better)
Translates to: LVFTKRYASSPREVHERSIFRSY*LTLRHL
Trigger: CAAGTGTCTCAGTGTCAACCAGTAACTCCTGAAAAT...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp CTAAATTTAAATGTTGGGCTCTCAGTAACTAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAGTCAGTTGTCCTCATAGTGCTAGTT +
Preference number: 2 (lower is better)
Translates to: LNLNVGLSVTNGLSL*NAPEVESVVLIVLV
Trigger: AACTAGCACTATGAGGACAACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATTAGTTACTGAGAGCCCAACATTTAAATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp AATGTAGCCACTTCCTGGGTTAGAGAATCTGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGGCTCTCAGTAACTAATGGTCTCTCT +
Preference number: 2 (lower is better)
Translates to: NVATSWVRESEVLWD*LNLNVGLSVTNGLS
Trigger: AGAGAGACCATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAGGAAGTGGCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp TGCAATATAATGTCGCATCTTGCCGGGCAACTGCTTGAGTGCCATTaGAATGATTTATTTTTGCGAAAGTTTGGCACTCTGAAGAACAAT +
Preference number: 2 (lower is better)
Translates to: CNIMSHLAGQLLECH*NDLFLRKFGTLKNN
Trigger: ATTGTTCTTCAGAGTGCCAAACTTTCGCAAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATTGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTTCGAGGAGTTTCTaGGTTTCCTCCAGTTTAAGC +
Preference number: 2 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCSSRSF*VSSSLS
Trigger: GCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCTATCTGAGAAAGCTGTaGCATTCTGAGTATTTGAAG +
Preference number: 2 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGYLRKL*HSEYLK
Trigger: CTTCAAATACTCAGAATGTCACAGCTTTCTCAGATA...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 2 (lower is better)
Translates to: LVFTKRYASSPREVHERSGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 2 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACATTTTCAGGAGTTACTaGTTGACACTGAGACACTTG +
Preference number: 2 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNIFRSY*LTLRHL
Trigger: CAAGTGTCTCAGTGTCAACCAGTAACTCCTGAAAAT...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTACAAACAGGACTTCTTTaGGTGCAATATAATGTCGCA +
Preference number: 2 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLQTGLL*VQYNVA
Trigger: TGCGACATTATATTGCACCCAAAGAAGTCCTGTTTG...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 2 (lower is better)
Translates to: VFHGILRTLLNFTALLNVVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 2 (lower is better)
Translates to: KRLFALLTSFILVACIQSFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATCAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAG +
Preference number: 2 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNQKGNL*SIAATK
Trigger: CTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTG...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTCTCTCTTTTGAATaGTCCAGAAGTGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCSLSFE*SRSGVS
Trigger: ACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTATCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 2 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTATCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 2 (lower is better)
Translates to: DCILDGKTKGVATGTHEVSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp ATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTA +
Preference number: 2 (lower is better)
Translates to: ILWKNVCLLYSQASS*WHVFRARLCPAFCL
Trigger: TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp ATCTATAAATTGCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAG +
Preference number: 2 (lower is better)
Translates to: IYKLQRSTVNSLEKR*FALLTSFILVACIQ
Trigger: CTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCAATTTATAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp TACAGCACAAGTAGAAACACTAATTATGTTGCTTCCAGCACCACTTaGAATGTGGAATTGTTGAGAATGCTGTTGAGTTGTTCCTGTTTT +
Preference number: 2 (lower is better)
Translates to: YSTSRNTNYVASSTT*NVELLRMLLSCSCF
Trigger: AAAACAGGAACAACTCAACAGCATTCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGCAACATAATTAGTGTTTCTACTTGTGCTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTGCAAAGGAGCACTGTaGATTCTTTGGAAAAACGTT +
Preference number: 2 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCCKGAL*ILWKNV
Trigger: AACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGTTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 2 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 2 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTACTAACATGGTGTaGCAGAAAGAACATGGGTTT +
Preference number: 2 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCSTNMV*QKEHGF
Trigger: AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR TCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCAGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTT +
Preference number: 2 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPAAEIS*LHICWF
Trigger: AAACCAGCAAATATGCAATCAACTAATCTCAGCTGC...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 2 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCACAGGACTTCTTTGGGTaGAATATAATGTCGCATCTT +
Preference number: 2 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPQDFFG*NIMSHL
Trigger: AAGATGCGACATTATATTGCACCCAAAGAAGTCCTG...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 90 bp AATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTaGTTAAATGTCACTGCTCTGTTAAACTTCACTGCTCACAAAATC +
Preference number: 2 (lower is better)
Translates to: NVFHGILRTLLNFTA*LNVTALLNFTAHKI
Trigger: GATTTTGTGAGCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR GCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 2 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 72 bp GTAGAGACAGGGTTGCCCAGGCTGGTCACGAACTCCTaGGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAG +
Preference number: 3 (lower is better)
Translates to: VETGLPRLVTNS*AQAICLPRPAK
Trigger: CTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCCTGGGCAACCCTGTCTCTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTTTGTAGAGACAGGGTaGCCCAGGCTGGTCACGAAC +
Preference number: 3 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSFVETG*PRLVTN
Trigger: GTTCGTGACCAGCCTGGGCAACCCTGTCTCTACAAA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR TCA 72 bp GGCTGGTGGATGATCTGCAAAGGCCTCGGGCTGATTTaGCAATGCTGTGGCTTGTGGAACAGATTGCTGGAC +
Preference number: 3 (lower is better)
Translates to: GWWMICKGLGLI*QCCGLWNRLLD
Trigger: GTCCAGCAATCTGTTCCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGCAGATCATCCACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR CAA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAG +
Preference number: 3 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSNGLSL*NAPEVE
Trigger: CTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATT...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR GCA 72 bp GGAAGGCCTCCCTTCACCATACAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAGGGCCATTTTGTGGGA +
Preference number: 3 (lower is better)
Translates to: GRPPFTIQKGNL*SIAATKGHFVG
Trigger: TCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTGTATGGTGAAGGGAGGCCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGGTAACCTTTGCTCTATaGCTGCCACCAAGGGCCATT +
Preference number: 3 (lower is better)
Translates to: FLISKVETKIPMVWVAGQVTFAL*LPPRAI
Trigger: AATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCCAACGGCCCTGGCTaGATTCATGGCATTTTAATG +
Preference number: 3 (lower is better)
Translates to: LYSQASSLWHVFRARLCPANGPG*IHGILM
Trigger: CATTAAAATGCCATGAATCAAGCCAGGGCCGTTGGC...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: LYSQASSLWHVFRARLCPGSYVA*AQFLIS
Trigger: AGAGATGAGAAACTGAGCCAAGGCCACATAGCTACC...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGGSYVA*AQFLIS
Trigger: AGAGATGAGAAACTGAGCCAAGGCCACATAGCTACC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTCCTCCCTGGACTTCTTaGTATCAGCAGAATTTACAG +
Preference number: 3 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGPPWTS*YQQNLQ
Trigger: CTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGG...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR GCA 72 bp ACGGATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTaGTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTA +
Preference number: 3 (lower is better)
Translates to: TDSAGIISCLCS*WFYLLSSPEVV
Trigger: TACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAATCCGT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTTAAGAATTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 3 (lower is better)
Translates to: CSIAATKGHFVGCGNFKNCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...ATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCT +
Preference number: 3 (lower is better)
Translates to: FLISKVETKIPMVWVAGQSQASS*WHVFRA
Trigger: AGCTCTGAATACATGCCACAAGGATGAAGCTTGTGA...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCT +
Preference number: 3 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLGSYVA*AQFLIS
Trigger: AGAGATGAGAAACTGAGCCAAGGCCACATAGCTACC...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: LADCILDGKTKGVATGTHSWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTGGTCAGAACAAGCATTaGAGAGTGGAGAACTACTTT +
Preference number: 3 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGGQNKH*RVENYF
Trigger: AAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACC...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGAGGCCTCGGGCTGATTaGACAATGCTGTGGCTTGTG +
Preference number: 3 (lower is better)
Translates to: RHNVFHGILRTLLNFTALRPRAD*TMLWLV
Trigger: CACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCT...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR-3UTR CAA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 3 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: VTFALLLPPRAILWDVVTSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACCCACCAAGGGCCATTTaGTGGGATGTGGTAACTTTA +
Preference number: 3 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNPPRAI*WDVVTL
Trigger: TAAAGTTACCACATCCCACAAAATGGCCCTTGGTGG...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: LFFAEGLADCILDGKTKGSWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCCTCCCTGGACTTCTTaGTATCAGCAGAATTTACAG +
Preference number: 3 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKPPWTS*YQQNLQ
Trigger: CTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGG...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTGTAGCCCTCTTATTTaGATGCAGGACATTAGGACC +
Preference number: 3 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFCSPLI*MQDIRT
Trigger: GGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 72 bp CTTCTCATAACAGTAGACCCTGTAGCCCTCTTATTTTaGTGCAGGACATTAGGACCTCTTTTCCATAAGGGA +
Preference number: 3 (lower is better)
Translates to: LLITVDPVALLF*CRTLGPLFHKG
Trigger: TCCCTTATGGAAAAGAGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACAGGGTCTACTGTTATGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 72 bp GATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTaGTTCTATCTTCTCTCTTCTCCAGAAGTGGTATTA +
Preference number: 3 (lower is better)
Translates to: DSAGIISCLCSC*FYLLSSPEVVL
Trigger: TAATACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCT +
Preference number: 3 (lower is better)
Translates to: LFFAEGLADCILDGKTKGSQASS*WHVFRA
Trigger: AGCTCTGAATACATGCCACAAGGATGAAGCTTGTGA...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGTGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 3 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACATCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 3 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGGCTTGTGATCATTTTTaGATAATGCGGAAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKACDHF*IMRKAR
Trigger: CCTTGCCTTCCGCATTATCAAAAAATGATCACAAGC...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 72 bp AACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTT +
Preference number: 3 (lower is better)
Translates to: NVCLLYSQASSL*HVFRARLCPAF
Trigger: AAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 72 bp GTAGCCACTTCCTGGGTTAGAGAATCTGAAGTGCTTTaGGATTTGCTAAATTTAAATGTTGGGCTCTCAGTA +
Preference number: 3 (lower is better)
Translates to: VATSWVRESEVL*DLLNLNVGLSV
Trigger: TACTGAGAGCCCAACATTTAAATTTAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAGGAAGTGGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 72 bp GAATATTTCTCTTGGTCTGGAAATGTAGCCACTTCCTaGGTTAGAGAATCTGAAGTGCTTTGGGATTTGCTA +
Preference number: 3 (lower is better)
Translates to: EYFSWSGNVATS*VRESEVLWDLL
Trigger: TAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAGGAAGTGGCTACATTTCCAGACCAAGAGAAATATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 3 (lower is better)
Translates to: NSLEKRLFALLTSFILVACSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 3 (lower is better)
Translates to: GILRTLLNFTALLNVTALCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGAAATGTTCATGGGGGTaGTTGCTCACATGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEKCSWG*LLTCFP
Trigger: AGGAAAACATGTGAGCAACAACCCCCATGAACATTT...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCGAAAGAACATGGGTTTaGGAACTAGATAAACCTGAG +
Preference number: 3 (lower is better)
Translates to: GKYMKGLLRRILLELSLVERTWV*ELDKPE
Trigger: CTCAGGTTTATCTAGTTCCAAAACCCATGTTCTTTC...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAGCTTGTGATCATTTTTaGATAATGCGGAAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVACDHF*IMRKAR
Trigger: CCTTGCCTTCCGCATTATCAAAAAATGATCACAAGC...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCSWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTTCAGAATATTTCTCTaGGTCTGGAAATGTAGCCAC +
Preference number: 3 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFFRIFL*VWKCSH
Trigger: GTGGCTACATTTCCAGACCAAGAGAAATATTCTGAA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACATTGAATGTGGAATTGTaGAGAATGCTGTTGAGTTGT +
Preference number: 3 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTLNVEL*RMLLSC
Trigger: ACAACTCAACAGCATTCTCAACAATTCCACATTCAA...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTCTTTGTGGCTTACCTaGCTTAGTTTTAGAATCATC +
Preference number: 3 (lower is better)
Translates to: AQFLISKVETKIPMVWVASLWLT*LSFRII
Trigger: GATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTT +
Preference number: 3 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCCWNYL*SLQLLV
Trigger: AACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTATGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 3 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTATCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 3 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 3 (lower is better)
Translates to: LFFAEGLADCILDGKTKGSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCAAGACTGTCTATACTaGAGAGGGTTTCAGAATTGG +
Preference number: 3 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLQDCLY*RGFQNW
Trigger: CCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTG...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGG +
Preference number: 3 (lower is better)
Translates to: GKYMKGLLRRILLELSLVEVLWD*LNLNVG
Trigger: CCCAACATTTAAATTTAGCAAATCCCAAAGCACTTC...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGG +
Preference number: 3 (lower is better)
Translates to: LADCILDGKTKGVATGTHEVLWD*LNLNVG
Trigger: CCCAACATTTAAATTTAGCAAATCCCAAAGCACTTC...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCTTTGTGGCTTACCTaGCTTAGTTTTAGAATCATC +
Preference number: 3 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDSLWLT*LSFRII
Trigger: GATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGA...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 72 bp TTAATAAAAGTGAGTTTTCATCTGAGGTGCTTGGAATaGTTCACAAACAACTTGGCACACTCTTCTGGCCTG +
Preference number: 3 (lower is better)
Translates to: LIKVSFHLRCLE*FTNNLAHSSGL
Trigger: CAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAATCATTCCAAGCACCTCAGATGAAAACTCACTTTTATTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
3UTR GCA 72 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCATCCTTGTGGCATGTAT +
Preference number: 3 (lower is better)
Translates to: KEHCEFFGKTFV*STHKLHPCGMY
Trigger: ATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR GCA 72 bp AATATAATGTCGCATCTTGCCGGGCAACTGCTTGAGTaGCATTTGAATGATTTATTTTTGCGAAAGTTTGGC +
Preference number: 3 (lower is better)
Translates to: NIMSHLAGQLLE*HLNDLFLRKFG
Trigger: GCCAAACTTTCGCAAAAATAAATCATTCAAATGGCACTCAAGCAGTTGCCCGGCAAGATGCGACATTATATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CCA 72 bp TGCATATTTGCTGGTTTGAGGGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCCTTATTAAGTGTTAAA +
Preference number: 3 (lower is better)
Translates to: CIFAGLREMVFR*MDVECSLLSVK
Trigger: TTTAACACTTAATAAGGAGCATTCCACATCCATCCAGCGGAATACCATTTCCCTCAAACCAGCAAATATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TATCTACTAAAATTCTGGAGGAGTCATGGGCAGAATTACAGAAGAATTCTGGTCGAAAGAACATGGGTTTaGGAACTAGATAAACCTGAG +
Preference number: 3 (lower is better)
Translates to: YLLKFWRSHGQNYRRILVERTWV*ELDKPE
Trigger: CTCAGGTTTATCTAGTTCCAAAACCCATGTTCTTTC...GACCAGAATTCTTCTGTAATTCTGCCCATGACTCCTCCAGAATTTTAGTAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263468.13
3UTR-3UTR CAA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGGCTTGTGATCATTTTTaGATAATGCGGAAGGCAAGG +
Preference number: 3 (lower is better)
Translates to: RHNVFHGILRTLLNFTALACDHF*IMRKAR
Trigger: CCTTGCCTTCCGCATTATCAAAAAATGATCACAAGC...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTAGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGG +
Preference number: 3 (lower is better)
Translates to: DCILDGKTKGVATGTHEVEVLWD*LNLNVG
Trigger: CCCAACATTTAAATTTAGCAAATCCCAAAGCACTTC...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGAGAATGCTGTTGAGTaGTTCCTGTTTTATTCTTCA +
Preference number: 3 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLENAVE*FLFYSS
Trigger: TGAAGAATAAAACAGGAACAACTCAACAGCATTCTC...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 72 bp TTCTTCATGCTCTGTAGCCTCAAGACTGTCTATACTTaGGAGGGTTTCAGAATTGGTTATCTGATTAACTTC +
Preference number: 3 (lower is better)
Translates to: FFMLCSLKTVYT*EGFRIGYLINF
Trigger: GAAGTTAATCAGATAACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTGAGGCTACAGAGCATGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR GCA 72 bp AGTTTATCTTCATCAAAGCAGCTGAGATTAGTTGATTaGATATTTGCTGGTTTGAGGGAAATGGTATTCCGC +
Preference number: 3 (lower is better)
Translates to: SLSSSKQLRLVD*IFAGLREMVFR
Trigger: GCGGAATACCATTTCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATTGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 3 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR TCA 72 bp TGCCAGTTTATCTTCATCAAAGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTTGAGGGAAATGGTATT +
Preference number: 3 (lower is better)
Translates to: CQFIFIKAAEIS*LHICWFEGNGI
Trigger: AATACCATTTCCCTCAAACCAGCAAATATGCAATCAACTAATCTCAGCTGCTTTGATGAAGATAAACTGGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR-3UTR CAA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 3 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCTCAGCGCCGCCTGTCTaGTCGCCCCCAGAACCTCCC +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFSAPPV*SPPEPP
Trigger: GGGAGGTTCTGGGGGCGAGCAGACAGGCGGCGCTGA...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
3UTR CAA 72 bp AGGCTGGTGGATGATCTGCAAAGGCCTCGGGCTGATTaGACAATGCTGTGGCTTGTGGAACAGATTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RLVDDLQRPRAD*TMLWLVEQIAG
Trigger: TCCAGCAATCTGTTCCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGCAGATCATCCACCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGGCCTCGGGCTGATTTaGCAATGCTGTGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTGLGLI*QCCGLW
Trigger: CCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGAACTCTGGGGTGCGTaGGGTGGATGGCCAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGELWGA*GGWPGG
Trigger: CCCACCTGGCCATCCACCCCACGCACCCCAGAGTTC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTGCTTTCCTCCGCTGTaGAAGAGGAACATGGGCACG +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTCFPPL*KRNMGT
Trigger: CGTGCCCATGTTCCTCTTTCACAGCGGAGGAAAGCA...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTCAGCGCCGCCTGTCTaGTCGCCCCCAGAACCTCCC +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHSAPPV*SPPEPP
Trigger: GGGAGGTTCTGGGGGCGAGCAGACAGGCGGCGCTGA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGCCAGAACCTCCCTCATaGCAGCTCCGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FLISKVETKIPMVWVAGQPEPPS*QLRLPP
Trigger: AGGAGGAAGCCGGAGCTGCCATGAGGGAGGTTCTGG...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTGTACATATAAAGCCTaGTTGGACTTTTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSCTYKA*LDFCRS
Trigger: GGATCTGCAAAAGTCCAATCAGGCTTTATATGTACA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTACTGAGGCTGGTGGATaGTCTGCAAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFTEAGG*SAKASG
Trigger: GCCCGAGGCCTTTGCAGATCATCCACCAGCCTCAGT...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGGGGCGGCAGCAACCCTaGAGCCGCCATCTTGACAAC +
Preference number: 4 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKGRQQP*SRHLDN
Trigger: GTTGTCAAGATGGCGGCTGCAGGGTTGCTGCCGCCC...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR CCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCCCAGAACCTCCCTCATaGCAGCTCCGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: GKYMKGLLRRILLELSLVPEPPS*QLRLPP
Trigger: AGGAGGAAGCCGGAGCTGCCATGAGGGAGGTTCTGG...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTTAGACGGATTCTGCTaGAATTATCTCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSLDGFC*NYLLSL
Trigger: CAGAGACAAGAGATAATTCCAGCAGAATCCGTCTAA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGTGGTGGGACCGCAATaGGACCCGTGGAGGAGACAG +
Preference number: 4 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLVVGPQ*DPWRRQ
Trigger: CTGTCTCCTCCACGGGTCCCATTGCGGTCCCACCAC...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTGGTGCGTGGGGTGGATaGCCAGGTGGGCAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGGAWGG*PGGQEG
Trigger: TCCTTCTTGCCCACCTGGCCATCCACCCCACGCACC...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR TCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCGTCGAGGTTGTCCGATaGTTCAGTGCCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: KRLFALLTSFILVACIQSVEVVR*FSAQFP
Trigger: GGGGAACTGGGCACTGAATCATCGGACAACCTCGAC...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCGTCGAGGTTGTCCGATaGTTCAGTGCCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFVEVVR*FSAQFP
Trigger: GGGGAACTGGGCACTGAATCATCGGACAACCTCGAC...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTGTCGAGGTTGTCCGATaGTTCAGTGCCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLVEVVR*FSAQFP
Trigger: GGGGAACTGGGCACTGAATCATCGGACAACCTCGAC...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTGCTTTCCTCCGCTGTaGAAGAGGAACATGGGCACG +
Preference number: 4 (lower is better)
Translates to: AQFLISKVETKIPMVWVACFPPL*KRNMGT
Trigger: CGTGCCCATGTTCCTCTTTCACAGCGGAGGAAAGCA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTGTGCAGGCAACGGAGTaGCATAAGAAAGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGVQATE*HKKEWG
Trigger: TCCCCACTCTTTCTTATGTCACTCCGTTGCCTGCAC...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGGGCCTCGGGCTGATTTaGCAATGCTGTGGCTTGTGG +
Preference number: 4 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKGLGLI*QCCGLW
Trigger: CCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCC...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTGGGCGGCAGCAACCCTaGAGCCGCCATCTTGACAAC +
Preference number: 4 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLGRQQP*SRHLDN
Trigger: GTTGTCAAGATGGCGGCTGCAGGGTTGCTGCCGCCC...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR GCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCATCAGCGCCGCCTGTCTaGTCGCCCCCAGAACCTCCC +
Preference number: 4 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPSAPPV*SPPEPP
Trigger: GGGAGGTTCTGGGGGCGAGCAGACAGGCGGCGCTGA...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATGTCCGATGATTCAGTaGCCAGTTCCCCGACCGCGC +
Preference number: 4 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVCPMIQ*PVPRPR
Trigger: GCGCGGTCGGGGAACTGGGCACTGAATCATCGGACA...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTCCGATGATTCAGTaGCCAGTTCCCCGACCGCGC +
Preference number: 4 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNCPMIQ*PVPRPR
Trigger: GCGCGGTCGGGGAACTGGGCACTGAATCATCGGACA...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTGGAGTCTTGCTCTGTTaGCAGGCTGGTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFGVLLC*QAGAVV
Trigger: CACCACTGCACCAGCCTGGCAACAGAGCAAGACTCC...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATCAGGCTGGTGTGCAGTaGCGAAACACAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHQAGVQ*RNTAHC
Trigger: GCAGTGAGCTGTGTTTCGCCACTGCACACCAGCCTG...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATCACTGTCACCCAGGCTaGTGTGCAGTGGCGAAACAC +
Preference number: 4 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYHCHPG*CAVAKH
Trigger: GTGTTTCGCCACTGCACACCAGCCTGGGTGACAGTG...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATCACTGTCACCCAGGCTaGTGTGCAGTGGCGAAACAC +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHHCHPG*CAVAKH
Trigger: GTGTTTCGCCACTGCACACCAGCCTGGGTGACAGTG...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGGGTGGATGGCCAGGTaGGCAAGAAGGAATTGGTGC +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHGWMAR*ARRNWC
Trigger: GCACCAATTCCTTCTTGCCCACCTGGCCATCCACCC...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR TCA 90 bp TGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTTAAGAATCTGGTCACGAACTCCTaGGCTCAAGCCATCTGTCTA +
Preference number: 4 (lower is better)
Translates to: CSIAATKGHFVGCGNFKNLVTNS*AQAICL
Trigger: TAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAG...ATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGCAAAGGCCTCGGGCTaGTTTGACAATGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGAKASG*FDNAVA
Trigger: AGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTACTGAGGCTGGTGGATaGTCTGCAAAGGCCTCGGGC +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPTEAGG*SAKASG
Trigger: GCCCGAGGCCTTTGCAGATCATCCACCAGCCTCAGT...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTGCAAGGGAGAGAACTaGGGCTGGTGGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDCKGEN*GWWMIC
Trigger: GCAGATCATCCACCAGCCTCAGTTCTCTCCCTTGCA...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTGCAAGGGAGAGAACTaGGGCTGGTGGATGATCTGC +
Preference number: 4 (lower is better)
Translates to: KRLFALLTSFILVACIQSCKGEN*GWWMIC
Trigger: GCAGATCATCCACCAGCCTCAGTTCTCTCCCTTGCA...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTGTCCGATGATTCAGTaGCCAGTTCCCCGACCGCGC +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHCPMIQ*PVPRPR
Trigger: GCGCGGTCGGGGAACTGGGCACTGAATCATCGGACA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGCCTCGGCCTGCAAAGTaGTGGGATTACAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMPRPAK*WDYRHK
Trigger: CTTATGCCTGTAATCCCAGCACTTTGCAGGCCGAGG...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCGAAACACAGCTCACTaGAGCCTCAACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLRNTAH*SLNLPG
Trigger: ACCTGGGAGGTTGAGGCTGCAGTGAGCTGTGTTTCG...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGGCTGGTGGATGATCTaGAAAGGCCTCGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGGWWMI*KGLGLI
Trigger: AATCAGCCCGAGGCCTTTGCAGATCATCCACCAGCC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CCA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTACAGGCTGGTGTGCAGTaGCGAAACACAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: DCILDGKTKGVATGTHEVQAGVQ*RNTAHC
Trigger: GCAGTGAGCTGTGTTTCGCCACTGCACACCAGCCTG...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTCACTGTCACCCAGGCTaGTGTGCAGTGGCGAAACAC +
Preference number: 4 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGHCHPG*CAVAKH
Trigger: GTGTTTCGCCACTGCACACCAGCCTGGGTGACAGTG...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACAGTAGGGGTCAGGTGTaGAGACAGCTGGACAGGCAG +
Preference number: 4 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNSRGQV*RQLDRQ
Trigger: CTGCCTGTCCAGCTGTCTCCACACCTGACCCCTACT...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACCCGCAATGGGACCCGTaGAGGAGACAGTTGATCAGG +
Preference number: 4 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNPQWDP*RRQLIR
Trigger: CCTGATCAACTGTCTCCTCCACGGGTCCCATTGCGG...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATATGATTGGAGAACTCTaGGGTGCGTGGGGTGGATGG +
Preference number: 4 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDMIGEL*GAWGGW
Trigger: CCATCCACCCCACGCACCCCAGAGTTCTCCAATCAT...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGAGGGTCAGGAATGATTaGAGAACTCTGGGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMRVRND*RTLGCV
Trigger: CACGCACCCCAGAGTTCTCCAATCATTCCTGACCCT...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTATGGTCTCTCTCTTTTaGATGCTCCAGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTMVSLF*MLQKWS
Trigger: ACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCAT...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTCTTGCAGACTGTGGTTaGATGACAGCGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: LYSQASSLWHVFRARLCPLADCG*MTAPFL
Trigger: CAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAG...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGTGATGGTATCACAGTaGCTAGGTCAGAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTVMVSQ*LGQNKH
Trigger: ATGCTTGTTCTGACCTAGTCACTGTGATACCATCAC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGTAGCCCTCTTATTTTaGTGCAGGACATTAGGACCT +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTVALLF*CRTLGP
Trigger: AGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTAC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCCTGGTCACGAACTCCTaGGCTCAAGCCATCTGTCTA +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFLVTNS*AQAICL
Trigger: TAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAG...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTACTTTCTTCCCCCAATaGGGAGGATTGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCTFFPQ*GGLKGW
Trigger: CCACCCCTTCAATCCTCCTCATTGGGGGAAGAAAGT...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTCCTCGGCCTGCAAAGTaGTGGGATTACAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFPRPAK*WDYRHK
Trigger: CTTATGCCTGTAATCCCAGCACTTTGCAGGCCGAGG...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATCTGTCTACCTCGGCCTaGAAAGTGCTGGGATTACAG +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHLSTSA*KVLGLQ
Trigger: CTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAG...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCCTGTCTACCTCGGCCTaGAAAGTGCTGGGATTACAG +
Preference number: 4 (lower is better)
Translates to: KRLFALLTSFILVACIQSLSTSA*KVLGLQ
Trigger: CTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAG...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATACAATTCCTGATCACTaGAACCTCTGCCTCCCAGGC +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHTIPDH*NLCLPG
Trigger: GCCTGGGAGGCAGAGGTTGCAGTGATCAGGAATTGT...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATGGAAGAATTTGGAAGTaGTGGGACCGCAATGGGACC +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHGRIWK*WDRNGT
Trigger: GGTCCCATTGCGGTCCCACCACTTCCAAATTCTTCC...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACGGCAGTATATGGGGCTaGCGGGCAGGAGAAACAGTT +
Preference number: 4 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNGSIWG*RAGETV
Trigger: AACTGTTTCTCCTGCCCGCCAGCCCCATATACTGCC...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTGGATAGGCAGTATATaGGGCTGGCGGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNWIGSI*GWRAGE
Trigger: TTCTCCTGCCCGCCAGCCCCATATACTGCCTATCCA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR TCA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTGCAGGCAACGGAGTaGCATAAGAAAGAGTGGGGA +
Preference number: 4 (lower is better)
Translates to: LFFAEGLADCILDGKTKGVQATE*HKKEWG
Trigger: TCCCCACTCTTTCTTATGTCACTCCGTTGCCTGCAC...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCCCTCGGCCTGCAAAGTaGTGGGATTACAGGCATAAG +
Preference number: 4 (lower is better)
Translates to: LFFAEGLADCILDGKTKGPRPAK*WDYRHK
Trigger: CTTATGCCTGTAATCCCAGCACTTTGCAGGCCGAGG...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATCTGTCTACCTCGGCCTaGAAAGTGCTGGGATTACAG +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNLSTSA*KVLGLQ
Trigger: CTGTAATCCCAGCACTTTGCAGGCCGAGGTAGACAG...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATGGGAGTAGAGGTGCGTaGCACCATGCCCAGCTATTT +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHGSRGA*HHAQLF
Trigger: AAATAGCTGGGCATGGTGGCACGCACCTCTACTCCC...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR GCA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCTGTTGCCAGGCTGGTaGAGTGGTGCAATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LEKRLFALLTSFILVACILLPGW*SGAISA
Trigger: AGCTGAGATTGCACCACTGCACCAGCCTGGCAACAG...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR GCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCAAGCTAGCAGGATGTaGAGGCAACGGAGTGACATA +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCQASRM*RQRSDI
Trigger: TATGTCACTCCGTTGCCTGCACATCCTGCTAGCTTG...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCCCAGAACCTCCCTCATaGCAGCTCCGGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVPEPPS*QLRLPP
Trigger: AGGAGGAAGCCGGAGCTGCCATGAGGGAGGTTCTGG...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTCTCCAGTTTATTGTTaGTCTACGGGAAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTSPVYC*STGKGK
Trigger: CTTCCCTTTTCCCGTAGACCAACAATAAACTGGAGA...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: FLISKVETKIPMVWVAGQEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: LYSQASSLWHVFRARLCPEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGCAGGCTGGTGTGCAGTaGCGAAACACAGCTCACTGC +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALQAGVQ*RNTAHC
Trigger: GCAGTGAGCTGTGTTTCGCCACTGCACACCAGCCTG...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCACGGTGAAGCTACTTTaGCATGCAGGATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGTVKLL*HAGCCC
Trigger: ACAGCAGCATCCTGCATGCCAAAGTAGCTTCACCGT...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR CCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTGCAACCTCTACCTCCTaGGTTCAAACGATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVFTKRYASSPREVHERSATSTS*VQTILL
Trigger: CAGGAGAATCGTTTGAACCCAGGAGGTAGAGGTTGC...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCAACAACCAGTGGAGCTaGAAGGGAACGACGAACAAG +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFNNQWS*KGTTNK
Trigger: CTTGTTCGTCGTTCCCTTCCAGCTCCACTGGTTGTT...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGAGGTTCCAAAGGGGTTaGGGAAACAACCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSERFQRG*GNNQWS
Trigger: GCTCCACTGGTTGTTTCCCCAACCCCTTTGGAACCT...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGCATATTTGCTGGTTTaGGGGAAATGGTATTCCGCT +
Preference number: 4 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLAYLLV*GKWYSA
Trigger: AGCGGAATACCATTTCCCTCAAACCAGCAAATATGC...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTGCATATTTGCTGGTTTaGGGGAAATGGTATTCCGCT +
Preference number: 4 (lower is better)
Translates to: YSQASSLWHVFRARLCPAAYLLV*GKWYSA
Trigger: AGCGGAATACCATTTCCCTCAAACCAGCAAATATGC...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTCTGGTCACGAACTCCTaGGCTCAAGCCATCTGTCTA +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPLVTNS*AQAICL
Trigger: TAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAG...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTTCTTCCTTAGAACTTaGAGATTCAGTGTGAAAGGG +
Preference number: 4 (lower is better)
Translates to: VTFALLLPPRAILWDVVTFFLRT*RFSVKG
Trigger: CCCTTTCACACTGAATCTTCAAGTTCTAAGGAAGAA...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR TCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGACTCAGGGTCAGGAATaGTTGGAGAACTCTGGGGTG +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALTQGQE*LENSGV
Trigger: CACCCCAGAGTTCTCCAATCATTCCTGACCCTGAGT...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR TCA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGATTGCTGGACTGACTaGAAAGGATCCAAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYDCWTD*KGSKLA
Trigger: TGCTAGCTTGGATCCTTTTCAGTCAGTCCAGCAATC...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTAACAGATTGCTGGACTaGCTGAAAAGGATCCAAGCT +
Preference number: 4 (lower is better)
Translates to: LYSQASSLWHVFRARLCPNRLLD*LKRIQA
Trigger: AGCTTGGATCCTTTTCAGTCAGTCCAGCAATCTGTT...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCAGCAAAGGCCTCGGGCTaGTTTGACAATGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: LSSTNMGGLDTKGTELLAAKASG*FDNAVA
Trigger: AGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGC...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGACTTTCTTCCCCCAATaGGGAGGATTGAAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALTFFPQ*GGLKGW
Trigger: CCACCCCTTCAATCCTCCTCATTGGGGGAAGAAAGT...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: FLISKVETKIPMVWVAGQVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp ACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTCGAAACACAGCTCACTaGAGCCTCAACCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: TVNSLEKRLFALLTSFILRNTAH*SLNLPG
Trigger: ACCTGGGAGGTTGAGGCTGCAGTGAGCTGTGTTTCG...AAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCCTCAAGCAGTCCTCCTaGCTTGGCCTCCAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCLKQSS*LGLQSA
Trigger: AGCACTTTGGAGGCCAAGGCAGGAGGACTGCTTGAG...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR GCA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCAGGCTGGTGGATGATCTaGAAAGGCCTCGGGCTGATT +
Preference number: 4 (lower is better)
Translates to: LSSTNMGGLDTKGTELLAGWWMI*KGLGLI
Trigger: AATCAGCCCGAGGCCTTTGCAGATCATCCACCAGCC...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTGGTATTCCGCTGGATaGATGTGGAATGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: AQFLISKVETKIPMVWVAWYSAG*MWNAPY
Trigger: ATAAGGAGCATTCCACATCCATCCAGCGGAATACCA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACATGGTATTCCGCTGGATaGATGTGGAATGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTWYSAG*MWNAPY
Trigger: ATAAGGAGCATTCCACATCCATCCAGCGGAATACCA...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: KRLFALLTSFILVACIQSEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATCAGTTCAAAGGCATATaGTCTGCTCCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYQFKGI*SAPDPP
Trigger: AGGAGGATCTGGAGCAGACCATATGCCTTTGAACTG...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATCAGTTCAAAGGCATATaGTCTGCTCCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHQFKGI*SAPDPP
Trigger: AGGAGGATCTGGAGCAGACCATATGCCTTTGAACTG...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTGTCTCTGCAGCTGCTaGTTCTATCTTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: YSQASSLWHVFRARLCPACLCSC*FYLLSS
Trigger: AGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACA...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGAGACAAAAATACCCATaGTTTGGGTGGCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLRQKYP*FGWLVR
Trigger: TCTGACCAGCCACCCAAACCATGGGTATTTTTGTCT...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACAAGACAAAAATACCCATaGTTTGGGTGGCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTRQKYP*FGWLVR
Trigger: TCTGACCAGCCACCCAAACCATGGGTATTTTTGTCT...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAACGGTGAAGCTACTTTaGCATGCAGGATGCTGCTGT +
Preference number: 4 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLTVKLL*HAGCCC
Trigger: ACAGCAGCATCCTGCATGCCAAAGTAGCTTCACCGT...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR CCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCGGAAGTAGCCGGGGTTaGAGGACAAGGATGATATTT +
Preference number: 4 (lower is better)
Translates to: GKYMKGLLRRILLELSLVGSSRG*RTRMIF
Trigger: AAATATCATCCTTGTCCTCCAACCCCGGCTACTTCC...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCATGGGGAAACAACCAGTaGAGCTGGAAGGGAACGACG +
Preference number: 4 (lower is better)
Translates to: LSSTNMGGLDTKGTELLAWGNNQ*SWKGTT
Trigger: CGTCGTTCCCTTCCAGCTCCACTGGTTGTTTCCCCA...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATAGGTTCCAAAGGGGTTaGGGAAACAACCAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHRFQRG*GNNQWS
Trigger: GCTCCACTGGTTGTTTCCCCAACCCCTTTGGAACCT...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CCA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTGATTTGACAATGCTGTaGCTTGTGGAACAGATTGCT +
Preference number: 4 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGDLTML*LVEQIA
Trigger: AGCAATCTGTTCCACAAGCCACAGCATTGTCAAATC...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
3UTR CAA 72 bp AAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTC +
Preference number: 4 (lower is better)
Translates to: KVFLDGFCWNYL*SLQLLVLSSLF
Trigger: GAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGCATATTTGCTGGTTTaGGGGAAATGGTATTCCGCT +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCAYLLV*GKWYSA
Trigger: AGCGGAATACCATTTCCCTCAAACCAGCAAATATGC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATGCATATTTGCTGGTTTaGGGGAAATGGTATTCCGCT +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHAYLLV*GKWYSA
Trigger: AGCGGAATACCATTTCCCTCAAACCAGCAAATATGC...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGATGGTCTCTCTCTTTTaGATGCTCCAGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKMVSLF*MLQKWS
Trigger: ACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCAT...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTTGTACATATAAAGCCTaGTTGGACTTTTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGCTYKA*LDFCRS
Trigger: GGATCTGCAAAAGTCCAATCAGGCTTTATATGTACA...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTCTTGCAGACTGTGGTTaGATGACAGCGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPLADCG*MTAPFL
Trigger: CAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAG...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCACTTGCAGACTGTGGTTaGATGACAGCGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: NSLEKRLFALLTSFILVALADCG*MTAPFL
Trigger: CAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAG...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGTCAGAACAAGCATTTaGGAGTGGAGAACTACTTTC +
Preference number: 4 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLVRTSI*EWRTTF
Trigger: GAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGAC...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCGTGATGGTATCACAGTaGCTAGGTCAGAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: KRLFALLTSFILVACIQSVMVSQ*LGQNKH
Trigger: ATGCTTGTTCTGACCTAGTCACTGTGATACCATCAC...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTGTAGCCCTCTTATTTTaGTGCAGGACATTAGGACCT +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFVALLF*CRTLGP
Trigger: AGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTAC...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCAACAGATTGCTGGACTaGCTGAAAAGGATCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFNRLLD*LKRIQA
Trigger: AGCTTGGATCCTTTTCAGTCAGTCCAGCAATCTGTT...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTCTCTCTCTTTTGAATaGTCCAGAAGTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: AQFLISKVETKIPMVWVASLSFE*SRSGVS
Trigger: ACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTCAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: LYSQASSLWHVFRARLCPQKGNL*SIAATK
Trigger: CTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTG...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTCAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: AQFLISKVETKIPMVWVAQKGNL*SIAATK
Trigger: CTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTG...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCACAAGCTAGCAGGATGTaGAGGCAACGGAGTGACATA +
Preference number: 4 (lower is better)
Translates to: NSLEKRLFALLTSFILVAQASRM*RQRSDI
Trigger: TATGTCACTCCGTTGCCTGCACATCCTGCTAGCTTG...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGGAACATGGGCACGCTaGAATTTTTCAGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLGTWAR*NFSVTS
Trigger: AGAAGTTACTGAAAAATTCCAGCGTGCCCATGTTCC...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACCAGTTCAAAGGCATATaGTCTGCTCCAGATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNQFKGI*SAPDPP
Trigger: AGGAGGATCTGGAGCAGACCATATGCCTTTGAACTG...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATTGTCTCTGCAGCTGCTaGTTCTATCTTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHCLCSC*FYLLSS
Trigger: AGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACA...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKQASSL*HVFRAR
Trigger: CCTAGCTCTGAATACATGCCACAAGGATGAAGCTTG...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTGTAGCTATGTGGCCTTaGCTCAGTTTCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: LVFTKRYASSPREVHERSVAMWP*LSFSSL
Trigger: TAGAGATGAGAAACTGAGCCAAGGCCACATAGCTAC...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGATTCACAAACAACTTaGCACACTCTTCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCDSQTT*HTLLAC
Trigger: ACAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAATC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCTGGACAGGCAGGAATaGATCTCCAGTTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKLDRQE*ISSLLL
Trigger: CAACAATAAACTGGAGATCCATTCCTGCCTGTCCAG...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGAGAATTTGGAAGTGGTaGGACCGCAATGGGACCCGT +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALRIWKW*DRNGTR
Trigger: ACGGGTCCCATTGCGGTCCCACCACTTCCAAATTCT...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGGCAGGAGAAACAGTTaGGTAGCTAGGAAGAATTTG +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCGRRNS*VARKNL
Trigger: CAAATTCTTCCTAGCTACCCAACTGTTTCTCCTGCC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGACTCCAGTTTATTGTTaGTCTACGGGAAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLTPVYC*STGKGK
Trigger: CTTCCCTTTTCCCGTAGACCAACAATAAACTGGAGT...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670318.1
3UTR CAA 72 bp AATGTTGGGCTCTCAGTAACTAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAGTCAGTTGTCCTCATA +
Preference number: 4 (lower is better)
Translates to: NVGLSVTNGLSL*NAPEVESVVLI
Trigger: TATGAGGACAACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATTAGTTACTGAGAGCCCAACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTTCTTCGAGGAGTTTCTaGGTTTCCTCCAGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLSSRSF*VSSSLS
Trigger: GCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGA...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: YSQASSLWHVFRARLCPAAAEIS*LHICWF
Trigger: AAACCAGCAAATATGCAATCAACTAATCTCAGCTGC...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGATGGTCTCTCTCTTTTaGATGCTCCAGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEMVSLF*MLQKWS
Trigger: ACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCAT...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGTCAGAACAAGCATTTaGGAGTGGAGAACTACTTTC +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCVRTSI*EWRTTF
Trigger: GAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGAC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGTCAGAACAAGCATTTaGGAGTGGAGAACTACTTTC +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHVRTSI*EWRTTF
Trigger: GAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGAC...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGGTAGCCCTCTTATTTTaGTGCAGGACATTAGGACCT +
Preference number: 4 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEVALLF*CRTLGP
Trigger: AGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTAC...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTGCAAAGGAGCACTGTaGATTCTTTGGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: YSQASSLWHVFRARLCPACKGAL*ILWKNV
Trigger: AACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCA...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATGATTGCTGGACTGACTaGAAAGGATCCAAGCTAGCA +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHDCWTD*KGSKLA
Trigger: TGCTAGCTTGGATCCTTTTCAGTCAGTCCAGCAATC...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCTCTCTCTCTTTTGAATaGTCCAGAAGTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGSLSFE*SRSGVS
Trigger: ACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGA...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATTCTCTCTCTTTTGAATaGTCCAGAAGTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHSLSFE*SRSGVS
Trigger: ACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGA...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTAGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: DCILDGKTKGVATGTHEVVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCTTTGGCATGCAGGATaGTGCTGTGTACATATATAC +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCLWHAG*CCVHIY
Trigger: GTATATATGTACACAGCAGCATCCTGCATGCCAAAG...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR GCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTCAAACGATTCTCCTaGCTCAGCCTCCTAGTAGCT +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALFKRFS*LSLLVA
Trigger: AGCTACTAGGAGGCTGAGGCAGGAGAATCGTTTGAA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCTGTGAAAGAGGAACATaGGCACGCTGGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFCERGT*ARWNFS
Trigger: TGAAAAATTCCAGCGTGCCCATGTTCCTCTTTCACA...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATGGTATTCCGCTGGATaGATGTGGAATGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVWYSAG*MWNAPY
Trigger: ATAAGGAGCATTCCACATCCATCCAGCGGAATACCA...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACATGCTCTACCTCTTTGTaGCTTACCTTGCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTCSTSL*LTLLSF
Trigger: AAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCA...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACACATATAAAGCCTGATTaGACTTTTGCAGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTHIKPD*TFADPG
Trigger: ACCAGGATCTGCAAAAGTCCAATCAGGCTTTATATG...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTCATATAAAGCCTGATTaGACTTTTGCAGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: AQFLISKVETKIPMVWVAHIKPD*TFADPG
Trigger: ACCAGGATCTGCAAAAGTCCAATCAGGCTTTATATG...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGCATATAAAGCCTGATTaGACTTTTGCAGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: FLISKVETKIPMVWVAGQHIKPD*TFADPG
Trigger: ACCAGGATCTGCAAAAGTCCAATCAGGCTTTATATG...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTATTTTCAGGAGTTACTaGTTGACACTGAGACACTTG +
Preference number: 4 (lower is better)
Translates to: LYSQASSLWHVFRARLCPIFRSY*LTLRHL
Trigger: CAAGTGTCTCAGTGTCAACCAGTAACTCCTGAAAAT...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTTAAGAATATTTTCAGGAGTTACTaGTTGACACTGAGACACTTG +
Preference number: 4 (lower is better)
Translates to: CSIAATKGHFVGCGNFKNIFRSY*LTLRHL
Trigger: CAAGTGTCTCAGTGTCAACCAGTAACTCCTGAAAAT...ATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGCAAACAGGACTTCTTTaGGTGCAATATAATGTCGCA +
Preference number: 4 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMQTGLL*VQYNVA
Trigger: TGCGACATTATATTGCACCCAAAGAAGTCCTGTTTG...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLQASSL*HVFRAR
Trigger: CCTAGCTCTGAATACATGCCACAAGGATGAAGCTTG...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKQASSL*HVFRAR
Trigger: CCTAGCTCTGAATACATGCCACAAGGATGAAGCTTG...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTCAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGQASSL*HVFRAR
Trigger: CCTAGCTCTGAATACATGCCACAAGGATGAAGCTTG...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTCTACTAACATGGTGTaGCAGAAAGAACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: YSQASSLWHVFRARLCPASTNMV*QKEHGF
Trigger: AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGA...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAGATTCACAAACAACTTaGCACACTCTTCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVDSQTT*HTLLAC
Trigger: ACAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAATC...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTGATTCACAAACAACTTaGCACACTCTTCTGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGDSQTT*HTLLAC
Trigger: ACAGGCCAGAAGAGTGTGCCAAGTTGTTTGTGAATC...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTATTCTGGAGGAGTCATaGGCAGAATTACAGAAGAAT +
Preference number: 4 (lower is better)
Translates to: YSQASSLWHVFRARLCPAILEES*AELQKN
Trigger: ATTCTTCTGTAATTCTGCCCATGACTCCTCCAGAAT...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATAGTAGAGGGTACAGATaGATGGATAGGCAGTATATG +
Preference number: 4 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDSRGYR*MDRQYM
Trigger: CATATACTGCCTATCCATCCATCTGTACCCTCTACT...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCTGGTGCAAAGGTCTTTaGAAGAGTAGAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: LFFAEGLADCILDGKTKGWCKGL*KSRGYR
Trigger: TCTGTACCCTCTACTCTTCCAAAGACCTTTGCACCA...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGGCTCCAGTTTATTGTTaGTCTACGGGAAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEAPVYC*STGKGK
Trigger: CTTCCCTTTTCCCGTAGACCAACAATAAACTGGAGC...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS-3UTR CCA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCTGGGGAAACAACCAGTaGAGCTCCAGTTTATTGTTG +
Preference number: 4 (lower is better)
Translates to: LFFAEGLADCILDGKTKGWGNNQ*SSSLLL
Trigger: CAACAATAAACTGGAGCTCCACTGGTTGTTTCCCCA...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670091.1
3UTR CAA 72 bp AAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCT +
Preference number: 4 (lower is better)
Translates to: KNVCLLYSQASS*WHVFRARLCPA
Trigger: AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 72 bp TTGCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LQRSTVNSLEKR*FALLTSFILVA
Trigger: TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTTTTAAGTTGGATTCCTaGATTTGTTTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCFKLDS*ICLRAS
Trigger: AGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAA...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATTTTAAGTTGGATTCCTaGATTTGTTTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHFKLDS*ICLRAS
Trigger: AGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAA...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATAAGACTGTCTATACTTaGGAGGGTTTCAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDKTVYT*EGFRIG
Trigger: ACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTT...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTATCTGAGAAAGCTGTaGCATTCTGAGTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: AQFLISKVETKIPMVWVAYLRKL*HSEYLK
Trigger: CTTCAAATACTCAGAATGTCACAGCTTTCTCAGATA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTATGGTCTCTCTCTTTTaGATGCTCCAGAAGTGGAGT +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPMVSLF*MLQKWS
Trigger: ACTCCACTTCTGGAGCATTCAAAAGAGAGAGACCAT...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCTGTACATATAAAGCCTaGTTGGACTTTTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFCTYKA*LDFCRS
Trigger: GGATCTGCAAAAGTCCAATCAGGCTTTATATGTACA...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCACTTGCAGACTGTGGTTaGATGACAGCGCCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPLADCG*MTAPFL
Trigger: CAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAG...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCACCACTTCTAATATTTaGTGTAGATTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFTTSNI*CRLRRR
Trigger: CCTCCTCCTCAATCTACATCAAATATTAGAAGTGGT...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTACCACTTCTAATATTTaGTGTAGATTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCTTSNI*CRLRRR
Trigger: CCTCCTCCTCAATCTACATCAAATATTAGAAGTGGT...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCAGTGATGGTATCACAGTaGCTAGGTCAGAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: NSLEKRLFALLTSFILVAVMVSQ*LGQNKH
Trigger: ATGCTTGTTCTGACCTAGTCACTGTGATACCATCAC...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCTGCAAAGGAGCACTGTaGATTCTTTGGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: GKYMKGLLRRILLELSLVCKGAL*ILWKNV
Trigger: AACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCA...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCTCTCTCTCTTTTGAATaGTCCAGAAGTGGAGTCAGT +
Preference number: 4 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGSLSFE*SRSGVS
Trigger: ACTGACTCCACTTCTGGAGCATTCAAAAGAGAGAGA...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATCAGGACTTCTTTGGGTaGAATATAATGTCGCATCTT +
Preference number: 4 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYQDFFG*NIMSHL
Trigger: AAGATGCGACATTATATTGCACCCAAAGAAGTCCTG...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TATCTACTAAAATTCTGGAGGAGTCATGGGCAGAATTACAGAAGAATTCTGGTCGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: YLLKFWRSHGQNYRRILVVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...GACCAGAATTCTTCTGTAATTCTGCCCATGACTCCTCCAGAATTTTAGTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR GCA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTTTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATCTTTGGCATGCAGGATaGTGCTGTGTACATATATAC +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNLWHAG*CCVHIY
Trigger: GTATATATGTACACAGCAGCATCCTGCATGCCAAAG...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR GCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTTTAAGACAGAGTGTTaGTCTGTCACTCAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNFKTEC*SVTQVG
Trigger: TCCAACCTGAGTGACAGAGCAACACTCTGTCTTAAA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR GCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGGTGGCTGCAGTAGAATaGTGTGCTGGAAGGAAATGT +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALVAAVE*CAGRKC
Trigger: ACATTTCCTTCCAGCACAGCATTCTACTGCAGCCAC...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CCA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTTGTGAAAGAGGAACATaGGCACGCTGGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLCERGT*ARWNFS
Trigger: TGAAAAATTCCAGCGTGCCCATGTTCCTCTTTCACA...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTATGTGAAAGAGGAACATaGGCACGCTGGAATTTTTCA +
Preference number: 4 (lower is better)
Translates to: DCILDGKTKGVATGTHEVCERGT*ARWNFS
Trigger: TGAAAAATTCCAGCGTGCCCATGTTCCTCTTTCACA...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGTCAGAATATTTCTCTTaGTCTGGAAATGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: FLISKVETKIPMVWVAGQSEYFS*SGNVAT
Trigger: AGTGGCTACATTTCCAGACCAAGAGAAATATTCTGA...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTCAGAATATTTCTCTTaGTCTGGAAATGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMSEYFS*SGNVAT
Trigger: AGTGGCTACATTTCCAGACCAAGAGAAATATTCTGA...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTGTCTCTGCAGCTGCTaGTTCTATCTTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHCLCSC*FYLLSS
Trigger: AGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTTGTCTCTGCAGCTGCTaGTTCTATCTTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEKRLFALLTSFILVACICLCSC*FYLLSS
Trigger: AGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACA...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCACAAGCTTCATCCTTGTaGCATGTATTCAGAGCTAGG +
Preference number: 4 (lower is better)
Translates to: NSLEKRLFALLTSFILVAQASSL*HVFRAR
Trigger: CCTAGCTCTGAATACATGCCACAAGGATGAAGCTTG...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTAAAATACCCATGGTTTaGGTGGCTGGTCAGATTAAA +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFKIPMV*VAGQIK
Trigger: TTTAATCTGACCAGCCACCCAAACCATGGGTATTTT...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTAAAATACCCATGGTTTaGGTGGCTGGTCAGATTAAA +
Preference number: 4 (lower is better)
Translates to: LVFTKRYASSPREVHERSKIPMV*VAGQIK
Trigger: TTTAATCTGACCAGCCACCCAAACCATGGGTATTTT...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTGTAGCTATGTGGCCTTaGCTCAGTTTCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLVAMWP*LSFSSL
Trigger: TAGAGATGAGAAACTGAGCCAAGGCCACATAGCTAC...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGGATTTGACAATGCTGTaGCTTGTGGAACAGATTGCT +
Preference number: 4 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKDLTML*LVEQIA
Trigger: AGCAATCTGTTCCACAAGCCACAGCATTGTCAAATC...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR TCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTTTAAGTTGGATTCCTaGATTTGTTTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNFKLDS*ICLRAS
Trigger: AGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTCTTCGAGGAGTTTCTaGGTTTCCTCCAGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALSSRSF*VSSSLS
Trigger: GCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGA...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLAAEIS*LHICWF
Trigger: AAACCAGCAAATATGCAATCAACTAATCTCAGCTGC...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTAGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: DCILDGKTKGVATGTHEVAAEIS*LHICWF
Trigger: AAACCAGCAAATATGCAATCAACTAATCTCAGCTGC...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGCAGCTGAGATTAGTTaGTTGCATATTTGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLAAEIS*LHICWF
Trigger: AAACCAGCAAATATGCAATCAACTAATCTCAGCTGC...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGTATCTGAGAAAGCTGTaGCATTCTGAGTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKYLRKL*HSEYLK
Trigger: CTTCAAATACTCAGAATGTCACAGCTTTCTCAGATA...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCTATCTGAGAAAGCTGTaGCATTCTGAGTATTTGAAG +
Preference number: 4 (lower is better)
Translates to: GKYMKGLLRRILLELSLVYLRKL*HSEYLK
Trigger: CTTCAAATACTCAGAATGTCACAGCTTTCTCAGATA...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTATGTACATATAAAGCCTaGTTGGACTTTTGCAGATCC +
Preference number: 4 (lower is better)
Translates to: DCILDGKTKGVATGTHEVCTYKA*LDFCRS
Trigger: GGATCTGCAAAAGTCCAATCAGGCTTTATATGTACA...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCACCACTTCTAATATTTaGTGTAGATTGAGGAGGAGG +
Preference number: 4 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGTTSNI*CRLRRR
Trigger: CCTCCTCCTCAATCTACATCAAATATTAGAAGTGGT...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTGTCAGAACAAGCATTTaGGAGTGGAGAACTACTTTC +
Preference number: 4 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLVRTSI*EWRTTF
Trigger: GAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGAC...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGGTAGCCCTCTTATTTTaGTGCAGGACATTAGGACCT +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALVALLF*CRTLGP
Trigger: AGGTCCTAATGTCCTGCATCAAAATAAGAGGGCTAC...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGTGCAAAGGAGCACTGTaGATTCTTTGGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKCKGAL*ILWKNV
Trigger: AACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCA...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCCTGGTCTTGAATTCCTaGGCTCAAATGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVLVLNS*AQMIHL
Trigger: CAGGTGGATCATTTGAGCTCAGGAATTCAAGACCAG...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR TCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATAAACAGTATACAGGCTaGAGAAAAGGATGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNKQYTG*RKGCGS
Trigger: ACTTCCACATCCTTTTCTTCAGCCTGTATACTGTTT...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGATCTCTGATAGCTGCTaGTTTTTGATTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLISDSC*FLISKL
Trigger: AAGTTTGGAAATCAAAAAGCAGCAGCTATCAGAGAT...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGCTTTGTGGCTTACCTTaGTTAGTTTTAGAATCATCA +
Preference number: 4 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMLCGLP*LVLESS
Trigger: TGATGATTCTAAAACTAAGCAAGGTAAGCCACAAAG...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTCTTTGTGGCTTACCTTaGTTAGTTTTAGAATCATCA +
Preference number: 4 (lower is better)
Translates to: LYSQASSLWHVFRARLCPLCGLP*LVLESS
Trigger: TGATGATTCTAAAACTAAGCAAGGTAAGCCACAAAG...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTATGTTGACTTTGCTTaGAGACTGTGGTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGYVDFA*RLWLND
Trigger: GTCATTCAACCACAGTCTGCAAGCAAAGTCAACATA...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCTATGTTGACTTTGCTTaGAGACTGTGGTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGYVDFA*RLWLND
Trigger: GTCATTCAACCACAGTCTGCAAGCAAAGTCAACATA...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGGGCAACTGCTTGAGTaGCATTTGAATGATTTATTT +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCGQLLE*HLNDLF
Trigger: AAATAAATCATTCAAATGGCACTCAAGCAGTTGCCC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCGGGCAACTGCTTGAGTaGCATTTGAATGATTTATTT +
Preference number: 4 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFGQLLE*HLNDLF
Trigger: AAATAAATCATTCAAATGGCACTCAAGCAGTTGCCC...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATGTTCATGGGGGTTGTTaGTCACATGTTTTCCTATGG +
Preference number: 4 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNVHGGC*SHVFLW
Trigger: CCATAGGAAAACATGTGAGCAACAACCCCCATGAAC...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: KRLFALLTSFILVACIQSGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTCAAAAAGGTAACCTTTaGTCTATTGCTGCCACCAAG +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPQKGNL*SIAATK
Trigger: CTTGGTGGCAGCAATAGAGCAAAGGTTACCTTTTTG...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCTGCTGCAGTAATATCTaGCGCTCTTCTTCTAAATTT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGCCSNI*RSSSKF
Trigger: AAATTTAGAAGAAGAGCGCCAGATATTACTGCAGCA...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTGGAACATGGGCACGCTaGAATTTTTCAGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLGTWAR*NFSVTS
Trigger: AGAAGTTACTGAAAAATTCCAGCGTGCCCATGTTCC...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTCTCCAGTTTATTGTTaGTCTACGGGAAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALSPVYC*STGKGK
Trigger: CTTCCCTTTTCCCGTAGACCAACAATAAACTGGAGA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000532529.1
CDS-3UTR CCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATTGGTATTCCGCTGGATaGATGTGGAATGCTCCTTAT +
Preference number: 4 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNWYSAG*MWNAPY
Trigger: ATAAGGAGCATTCCACATCCATCCAGCGGAATACCA...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCAGAAATGGTATTCCGCTaGATGGATGTGGAATGCTCC +
Preference number: 4 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPEMVFR*MDVECS
Trigger: GGAGCATTCCACATCCATCCAGCGGAATACCATTTC...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCAGAATATTTCTCTTaGTCTGGAAATGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: LVFTKRYASSPREVHERSSEYFS*SGNVAT
Trigger: AGTGGCTACATTTCCAGACCAAGAGAAATATTCTGA...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTATGCTCTACCTCTTTGTaGCTTACCTTGCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLCSTSL*LTLLSF
Trigger: AAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCA...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTGCTCTACCTCTTTGTaGCTTACCTTGCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNCSTSL*LTLLSF
Trigger: AAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCTCTACCTCTTTGTaGCTTACCTTGCTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGCSTSL*LTLLSF
Trigger: AAAACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCA...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCAAACAGGACTTCTTTaGGTGCAATATAATGTCGCA +
Preference number: 4 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLQTGLL*VQYNVA
Trigger: TGCGACATTATATTGCACCCAAAGAAGTCCTGTTTG...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTTAGACGGATTCTGCTaGAATTATCTCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNLDGFC*NYLLSL
Trigger: CAGAGACAAGAGATAATTCCAGCAGAATCCGTCTAA...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAAAAATACCCATGGTTTaGGTGGCTGGTCAGATTAAA +
Preference number: 4 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLKIPMV*VAGQIK
Trigger: TTTAATCTGACCAGCCACCCAAACCATGGGTATTTT...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATGTAGCTATGTGGCCTTaGCTCAGTTTCTCATCTCTA +
Preference number: 4 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNVAMWP*LSFSSL
Trigger: TAGAGATGAGAAACTGAGCCAAGGCCACATAGCTAC...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTATCTACTAACATGGTGTaGCAGAAAGAACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLSTNMV*QKEHGF
Trigger: AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGA...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTCTACTAACATGGTGTaGCAGAAAGAACATGGGTTT +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNSTNMV*QKEHGF
Trigger: AAACCCATGTTCTTTCTGCCACACCATGTTAGTAGA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATCCATTTCTACTAACATaGTGTGGCAGAAAGAACATG +
Preference number: 4 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNPFLLT*CGRKNM
Trigger: CATGTTCTTTCTGCCACACCATGTTAGTAGAAATGG...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCTATCTACTAAAATTCTaGAGGAGTCATGGGCAGAAT +
Preference number: 4 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGYLLKF*RSHGQN
Trigger: ATTCTGCCCATGACTCCTCCAGAATTTTAGTAGATA...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000263468.13
3UTR CAA 72 bp AATTTTGATTCTGTCACTGTAGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCTAAAGTGGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: NFDSVTVGSYVA*AQFLISKVETK
Trigger: TTTTGTCTCCACTTTAGAGATGAGAAACTGAGCCAAGGCCACATAGCTACCTACAGTGACAGAATCAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTTTAAGTTGGATTCCTaGATTTGTTTGAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPFKLDS*ICLRAS
Trigger: AGAGGCCCTCAAACAAATTCAGGAATCCAACTTAAA...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTTCTTCGAGGAGTTTCTaGGTTTCCTCCAGTTTAAGC +
Preference number: 4 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVSSRSF*VSSSLS
Trigger: GCTTAAACTGGAGGAAACTCAGAAACTCCTCGAAGA...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTAAGACTGTCTATACTTaGGAGGGTTTCAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPKTVYT*EGFRIG
Trigger: ACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTT...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTAAGACTGTCTATACTTaGGAGGGTTTCAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: LEKRLFALLTSFILVACIKTVYT*EGFRIG
Trigger: ACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTT...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCGTGATGGTATCACAGTaGCTAGGTCAGAACAAGCAT +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVVMVSQ*LGQNKH
Trigger: ATGCTTGTTCTGACCTAGTCACTGTGATACCATCAC...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCTTTGTGGCTTACCTTaGTTAGTTTTAGAATCATCA +
Preference number: 4 (lower is better)
Translates to: LLYSQASSLWHVFRARLCLCGLP*LVLESS
Trigger: TGATGATTCTAAAACTAAGCAAGGTAAGCCACAAAG...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTATGTTGACTTTGCTTaGAGACTGTGGTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHYVDFA*RLWLND
Trigger: GTCATTCAACCACAGTCTGCAAGCAAAGTCAACATA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATTTTGTTAAATGTCACTaGTCTGTTAAACTTCACTGC +
Preference number: 4 (lower is better)
Translates to: LADCILDGKTKGVATGTHFVKCH*SVKLHC
Trigger: GCAGTGAAGTTTAACAGAGCAGTGACATTTAACAAA...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCAGGTGCGTGCCACCATaGCCAGCTATTTTTGTATTT +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVRCVPP*PAIFVF
Trigger: AAATACAAAAATAGCTGGGCATGGTGGCACGCACCT...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCGGAACATGGGCACGCTaGAATTTTTCAGTAACTTCT +
Preference number: 4 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCGTWAR*NFSVTS
Trigger: AGAAGTTACTGAAAAATTCCAGCGTGCCCATGTTCC...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTCAAACAGGACTTCTTTaGGTGCAATATAATGTCGCA +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPQTGLL*VQYNVA
Trigger: TGCGACATTATATTGCACCCAAAGAAGTCCTGTTTG...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCTGTCTCTGCAGCTGCTaGTTCTATCTTCTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVCLCSC*FYLLSS
Trigger: AGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACA...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATTAGACGGATTCTGCTaGAATTATCTCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NSLEKRLFALLTSFILVALDGFC*NYLLSL
Trigger: CAGAGACAAGAGATAATTCCAGCAGAATCCGTCTAA...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTAGACAAAAATACCCATaGTTTGGGTGGCTGGTCAGA +
Preference number: 4 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVRQKYP*FGWLVR
Trigger: TCTGACCAGCCACCCAAACCATGGGTATTTTTGTCT...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCCATTTCTACTAACATaGTGTGGCAGAAAGAACATG +
Preference number: 4 (lower is better)
Translates to: LEKRLFALLTSFILVACIPFLLT*CGRKNM
Trigger: CATGTTCTTTCTGCCACACCATGTTAGTAGAAATGG...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp ACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTTGCAAAGGAGCACTGTaGATTCTTTGGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: TVNSLEKRLFALLTSFILCKGAL*ILWKNV
Trigger: AACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCA...AAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCATGCAAAGGAGCACTGTaGATTCTTTGGAAAAACGTT +
Preference number: 4 (lower is better)
Translates to: LSSTNMGGLDTKGTELLACKGAL*ILWKNV
Trigger: AACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCA...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGAAACAGTATACAGGCTaGAGAAAAGGATGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALKQYTG*RKGCGS
Trigger: ACTTCCACATCCTTTTCTTCAGCCTGTATACTGTTT...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR GCA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATCTCTGATAGCTGCTaGTTTTTGATTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGISDSC*FLISKL
Trigger: AAGTTTGGAAATCAAAAAGCAGCAGCTATCAGAGAT...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAATCTCTGATAGCTGCTaGTTTTTGATTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVISDSC*FLISKL
Trigger: AAGTTTGGAAATCAAAAAGCAGCAGCTATCAGAGAT...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTGGGCAACTGCTTGAGTaGCATTTGAATGATTTATTT +
Preference number: 4 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPGQLLE*HLNDLF
Trigger: AAATAAATCATTCAAATGGCACTCAAGCAGTTGCCC...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp ACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTCAGGACTTCTTTGGGTaGAATATAATGTCGCATCTT +
Preference number: 4 (lower is better)
Translates to: TVNSLEKRLFALLTSFILQDFFG*NIMSHL
Trigger: AAGATGCGACATTATATTGCACCCAAAGAAGTCCTG...AAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTGGAAAAACGTTTGTTTaGTCTACTCACAAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLGKTFV*STHKLH
Trigger: ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCC...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTTGCTGCAGTAATATCTaGCGCTCTTCTTCTAAATTT +
Preference number: 4 (lower is better)
Translates to: LEKRLFALLTSFILVACICCSNI*RSSSKF
Trigger: AAATTTAGAAGAAGAGCGCCAGATATTACTGCAGCA...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTTCAGAATATTTCTCTTaGTCTGGAAATGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: LEKRLFALLTSFILVACISEYFS*SGNVAT
Trigger: AGTGGCTACATTTCCAGACCAAGAGAAATATTCTGA...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGCATATAAAGCCTGATTaGACTTTTGCAGATCCTGGT +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALHIKPD*TFADPG
Trigger: ACCAGGATCTGCAAAAGTCCAATCAGGCTTTATATG...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGATTTTCAGGAGTTACTaGTTGACACTGAGACACTTG +
Preference number: 4 (lower is better)
Translates to: RHNVFHGILRTLLNFTALIFRSY*LTLRHL
Trigger: CAAGTGTCTCAGTGTCAACCAGTAACTCCTGAAAAT...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCCAAACAGGACTTCTTTaGGTGCAATATAATGTCGCA +
Preference number: 4 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCQTGLL*VQYNVA
Trigger: TGCGACATTATATTGCACCCAAAGAAGTCCTGTTTG...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCACATGTTTTGAATTTAGACGGATTCTGCTaGAATTATCTCTTGTCTCTG +
Preference number: 4 (lower is better)
Translates to: FPDSTDSNCVLLEAHVLNLDGFC*NYLLSL
Trigger: CAGAGACAAGAGATAATTCCAGCAGAATCCGTCTAA...ATTCAAAACATGTGCTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 72 bp ACTTCCTGGGTTAGAGAATCTGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGGCTCTCAGTAACTAAT +
Preference number: 4 (lower is better)
Translates to: TSWVRESEVLWD*LNLNVGLSVTN
Trigger: ATTAGTTACTGAGAGCCCAACATTTAAATTTAGCAAATCCCAAAGCACTTCAGATTCTCTAACCCAGGAAGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR TCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCAAAGACTGTCTATACTTaGGAGGGTTTCAGAATTGGT +
Preference number: 4 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPKTVYT*EGFRIG
Trigger: ACCAATTCTGAAACCCTCTCAAGTATAGACAGTCTT...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCTATGTTGACTTTGCTTaGAGACTGTGGTTGAATGAC +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVYVDFA*RLWLND
Trigger: GTCATTCAACCACAGTCTGCAAGCAAAGTCAACATA...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCCAGGACTTCTTTGGGTaGAATATAATGTCGCATCTT +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVQDFFG*NIMSHL
Trigger: AAGATGCGACATTATATTGCACCCAAAGAAGTCCTG...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTCTGTTAAACTTCACTaGTTTGTTAAATGTCACTGC +
Preference number: 4 (lower is better)
Translates to: GILRTLLNFTALLNVTALSVKLH*FVKCHC
Trigger: GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCGGGCAACTGCTTGAGTaGCATTTGAATGATTTATTT +
Preference number: 4 (lower is better)
Translates to: VFHGILRTLLNFTALLNVGQLLE*HLNDLF
Trigger: AAATAAATCATTCAAATGGCACTCAAGCAGTTGCCC...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CCA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTTCCTCCAGTTTAAGCTaGAACACATTTTTGCTAGTA +
Preference number: 4 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVSSSLS*NTFLLV
Trigger: TACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGA...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 72 bp GAAATCTATAAATTGCAAAGGAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTC +
Preference number: 4 (lower is better)
Translates to: EIYKLQRSTVNS*EKRLFALLTSF
Trigger: GAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGCAATTTATAGATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
3UTR CAA 72 bp TTGTGTAAATATGTTGACTTTGCTTGCAGACTGTGGTaGAATGACAGCGCCTTTTCTGTTTGTACATATAAA +
Preference number: 4 (lower is better)
Translates to: LCKYVDFACRLW*NDSAFSVCTYK
Trigger: TTTATATGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAACATATTTACACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTATCTCTGATAGCTGCTaGTTTTTGATTTCCAAACTT +
Preference number: 4 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVISDSC*FLISKL
Trigger: AAGTTTGGAAATCAAAAAGCAGCAGCTATCAGAGAT...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR GCA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCACTTTGTGGCTTACCTTaGTTAGTTTTAGAATCATCA +
Preference number: 4 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPLCGLP*LVLESS
Trigger: TGATGATTCTAAAACTAAGCAAGGTAAGCCACAAAG...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTACGGGCGCGGAAGGGTaGGCCTCGACAGCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSTGAEG*ASTALA
Trigger: AGCTAGGGCTGTCGAGGCCAACCCTTCCGCGCCCGT...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS CCA 90 bp TGGATGGATAGGCAGTATATGGGGCTGGCGGGCAGGAGAAACAGTTaGGTAGCTAGGAAGAATTTGGAAGTGGTGGGACCGCAATGGGAC +
Preference number: 5 (lower is better)
Translates to: WMDRQYMGLAGRRNS*VARKNLEVVGPQWD
Trigger: GTCCCATTGCGGTCCCACCACTTCCAAATTCTTCCTAGCTACCCAACTGTTTCTCCTGCCCGCCAGCCCCATATACTGCCTATCCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS CCA 90 bp GGGACTGGTGCAAAGGTCTTTGGAAGAGTAGAGGGTACAGATGGATaGATAGGCAGTATATGGGGCTGGCGGGCAGGAGAAACAGTTGGG +
Preference number: 5 (lower is better)
Translates to: GTGAKVFGRVEGTDG*IGSIWGWRAGETVG
Trigger: CCCAACTGTTTCTCCTGCCCGCCAGCCCCATATACTGCCTATCCATCCATCTGTACCCTCTACTCTTCCAAAGACCTTTGCACCAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CAA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAACGGGCGCGGAAGGGTaGGCCTCGACAGCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVTGAEG*ASTALA
Trigger: AGCTAGGGCTGTCGAGGCCAACCCTTCCGCGCCCGT...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTTGTAGCCCTCTTATTTaGATGCAGGACATTAGGACC +
Preference number: 5 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSCSPLI*MQDIRT
Trigger: GGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACA...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS CCA 90 bp CTGGTGGATGATCTGCAAAGGCCTCGGGCTGATTTGACAATGCTGTaGCTTGTGGAACAGATTGCTGGACTGACTGAAAAGGATCCAAGC +
Preference number: 5 (lower is better)
Translates to: LVDDLQRPRADLTML*LVEQIAGLTEKDPS
Trigger: GCTTGGATCCTTTTCAGTCAGTCCAGCAATCTGTTCCACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCTTTGCAGATCATCCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CAA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTACGGGCGCGGAAGGGTaGGCCTCGACAGCCCTAGCT +
Preference number: 5 (lower is better)
Translates to: LEKRLFALLTSFILVACITGAEG*ASTALA
Trigger: AGCTAGGGCTGTCGAGGCCAACCCTTCCGCGCCCGT...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGGGGCTCTGTCGAGGTaGTCCGATGATTCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYGALSR*SDDSVP
Trigger: GGGCACTGAATCATCGGACAACCTCGACAGAGCCCC...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATGGGGCTCTGTCGAGGTaGTCCGATGATTCAGTGCCC +
Preference number: 5 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNGALSR*SDDSVP
Trigger: GGGCACTGAATCATCGGACAACCTCGACAGAGCCCC...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GGCTGGTCACGAACTCCTGAGCTCAAGCCATCTGTCTACCTCGGCCTGCAAAGTGAGAATGCTGTTGAGTaGTTCCTGTTTTATTCTTCA +
Preference number: 5 (lower is better)
Translates to: GWSRTPELKPSVYLGLQSENAVE*FLFYSS
Trigger: TGAAGAATAAAACAGGAACAACTCAACAGCATTCTC...ACTTTGCAGGCCGAGGTAGACAGATGGCTTGAGCTCAGGAGTTCGTGACCAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGCTTGCAGACTGTGGTaGAATGACAGCGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VTFALLLPPRAILWDVVTACRLW*NDSAFS
Trigger: AGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGTAACCTTTGCTCTATaGCTGCCACCAAGGGCCATT +
Preference number: 5 (lower is better)
Translates to: VTFALLLPPRAILWDVVTVTFAL*LPPRAI
Trigger: AATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTGTAGAGACAGGGTaGCCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMFVETG*PRLVTN
Trigger: GTTCGTGACCAGCCTGGGCAACCCTGTCTCTACAAA...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: VTFALLLPPRAILWDVVTSWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTCCACCAAGGGCCATTTaGTGGGATGTGGTAACTTTA +
Preference number: 5 (lower is better)
Translates to: VTFALLLPPRAILWDVVTPPRAI*WDVVTL
Trigger: TAAAGTTACCACATCCCACAAAATGGCCCTTGGTGG...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTTTTGTAGAGACAGGGTaGCCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFFVETG*PRLVTN
Trigger: GTTCGTGACCAGCCTGGGCAACCCTGTCTCTACAAA...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTGACTTTGCTTGCAGACTGTGGTTGAATGACAGCGCCTTTTCTGTTTGTACAGCTTGCAGACTGTGGTaGAATGACAGCGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VDFACRLWLNDSAFSVCTACRLW*NDSAFS
Trigger: AGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGC...TGTACAAACAGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGCAAAGTCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTTAAGAATGCCAACGGCCCTGGCTaGATTCATGGCATTTTAATG +
Preference number: 5 (lower is better)
Translates to: CSIAATKGHFVGCGNFKNANGPG*IHGILM
Trigger: CATTAAAATGCCATGAATCAAGCCAGGGCCGTTGGC...ATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTAACGGTGAAGCTACTTaGGCATGCAGGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLNGEAT*ACRMLL
Trigger: CAGCAGCATCCTGCATGCCAAAGTAGCTTCACCGTT...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS-3UTR CAA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGAGGTTCCAAAGGGGTaGGGGAAACAACCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LFFAEGLADCILDGKTKGEVPKG*GKQPVE
Trigger: CTCCACTGGTTGTTTCCCCAACCCCTTTGGAACCTC...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CAA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAAGGCCTCGGGCTGATTaGACAATGCTGTGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVRPRAD*TMLWLV
Trigger: CACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCT...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CAA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTTGGAGCTCCAGTTTATaGTTGGTCTACGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGWSSSL*LVYGKR
Trigger: CCTTTTCCCGTAGACCAACAATAAACTGGAGCTCCA...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS-3UTR CAA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTGCAAAACTAAAGGCGTaGCCACTGGTACACATGAAG +
Preference number: 5 (lower is better)
Translates to: YSQASSLWHVFRARLCPAAKLKA*PLVHMK
Trigger: CTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGC...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTCTCCAGAAGTGGTGCTTCCAGCACCACTTaGAATGTGGAATTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: YLLSLQLLVLSSLFSRSGASSTT*NVELLR
Trigger: TCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGC...ACCACTTCTGGAGAAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGCTTGCAGACTGTGGTaGAATGACAGCGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYACRLW*NDSAFS
Trigger: AGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGC...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTCCACCAAGGGCCATTTaGTGGGATGTGGTAACTTTA +
Preference number: 5 (lower is better)
Translates to: AQFLISKVETKIPMVWVAPPRAI*WDVVTL
Trigger: TAAAGTTACCACATCCCACAAAATGGCCCTTGGTGG...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTTTGTAGAGACAGGGTaGCCCAGGCTGGTCACGAAC +
Preference number: 5 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPFVETG*PRLVTN
Trigger: GTTCGTGACCAGCCTGGGCAACCCTGTCTCTACAAA...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCT +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYGSYVA*AQFLIS
Trigger: AGAGATGAGAAACTGAGCCAAGGCCACATAGCTACC...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGAACGGTGAAGCTACTTaGGCATGCAGGATGCTGCTG +
Preference number: 5 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSENGEAT*ACRMLL
Trigger: CAGCAGCATCCTGCATGCCAAAGTAGCTTCACCGTT...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000263468.13
ENST00000670091.1
CDS-3UTR CAA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCAGAGGTTCCAAAGGGGTaGGGGAAACAACCAGTGGAG +
Preference number: 5 (lower is better)
Translates to: NSLEKRLFALLTSFILVAEVPKG*GKQPVE
Trigger: CTCCACTGGTTGTTTCCCCAACCCCTTTGGAACCTC...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CAA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHSWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGGCAAAACTAAAGGCGTaGCCACTGGTACACATGAAG +
Preference number: 5 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKAKLKA*PLVHMK
Trigger: CTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGC...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAATTATCTCTTGTCGCAAAACTAAAGGCGTaGCCACTGGTACACATGAAG +
Preference number: 5 (lower is better)
Translates to: GKYMKGLLRRILLELSLVAKLKA*PLVHMK
Trigger: CTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGC...GACAAGAGATAATTCCAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATGCAAAACTAAAGGCGTaGCCACTGGTACACATGAAG +
Preference number: 5 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHAKLKA*PLVHMK
Trigger: CTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGC...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGCTTCCAGCACCACTTaGAATGTGGAATTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLASSTT*NVELLR
Trigger: TCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGC...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGGCTTCCAGCACCACTTaGAATGTGGAATTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: FLISKVETKIPMVWVAGQASSTT*NVELLR
Trigger: TCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGC...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGCCTCCCTGGACTTCTTaGTATCAGCAGAATTTACAG +
Preference number: 5 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLPPWTS*YQQNLQ
Trigger: CTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGG...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTTGTAGCCCTCTTATTTaGATGCAGGACATTAGGACC +
Preference number: 5 (lower is better)
Translates to: LYSQASSLWHVFRARLCPCSPLI*MQDIRT
Trigger: GGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACA...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LVFTKRYASSPREVHERSCWNYL*SLQLLV
Trigger: AACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCA...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCAAGGCCTCGGGCTGATTaGACAATGCTGTGGCTTGTG +
Preference number: 5 (lower is better)
Translates to: LSSTNMGGLDTKGTELLARPRAD*TMLWLV
Trigger: CACAAGCCACAGCATTGTCAAATCAGCCCGAGGCCT...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS CCA 90 bp ACTGGTTTTCGGGAAACTGCTTTCCTCCGCTGTGAAAGAGGAACATaGGCACGCTGGAATTTTTCAGTAACTTCTTCAAACTTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: TGFRETAFLRCERGT*ARWNFSVTSSNFCF
Trigger: AAAACAGAAGTTTGAAGAAGTTACTGAAAAATTCCAGCGTGCCCATGTTCCTCTTTCACAGCGGAGGAAAGCAGTTTCCCGAAAACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTCTCTCCAGTTTATTGTaGGTCTACGGGAAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LVFTKRYASSPREVHERSLSSLL*VYGKRE
Trigger: TTCCCTTTTCCCGTAGACCAACAATAAACTGGAGAG...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CAA 90 bp CTGCTCACAAAATCTGAGTTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGGCTTGTGATCATTTTTaGATAATGCGGAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LLTKSELGQMFMGVVAHMACDHF*IMRKAR
Trigger: CCTTGCCTTCCGCATTATCAAAAAATGATCACAAGC...CATGTGAGCAACAACCCCCATGAACATTTGTCCTAACTCAGATTTTGTGAGCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYNGLSL*NAPEVE
Trigger: CTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATT...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTAACCTTTGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTGAGAATGCTGTTGAGTaGTTCCTGTTTTATTCTTCA +
Preference number: 5 (lower is better)
Translates to: VTFALLLPPRAILWDVVTENAVE*FLFYSS
Trigger: TGAAGAATAAAACAGGAACAACTCAACAGCATTCTC...AGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTGCTTCCAGCACCACTTaGAATGTGGAATTGTTGAGA +
Preference number: 5 (lower is better)
Translates to: LLYSQASSLWHVFRARLCASSTT*NVELLR
Trigger: TCTCAACAATTCCACATTCAAAGTGGTGCTGGAAGC...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GCTCAGTTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTTTTTGCTCTACCTCTTaGTGGCTTACCTTGCTTAGT +
Preference number: 5 (lower is better)
Translates to: AQFLISKVETKIPMVWVAFCSTS*WLTLLS
Trigger: ACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCAAAA...AGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAACTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGGTCAGAACAAGCATTaGAGAGTGGAGAACTACTTT +
Preference number: 5 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLGQNKH*RVENYF
Trigger: AAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACC...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATTGTAGCCCTCTTATTTaGATGCAGGACATTAGGACC +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYCSPLI*MQDIRT
Trigger: GGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACA...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLCWNYL*SLQLLV
Trigger: AACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCA...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: QNKHLRVENYFPDSTDSNCWNYL*SLQLLV
Trigger: AACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCA...GTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: KRLFALLTSFILVACIQSCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: LVFTKRYASSPREVHERSCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: KRLFALLTSFILVACIQSSQASS*WHVFRA
Trigger: AGCTCTGAATACATGCCACAAGGATGAAGCTTGTGA...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFSQASS*WHVFRA
Trigger: AGCTCTGAATACATGCCACAAGGATGAAGCTTGTGA...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATCTACTAAAATTCTGGAGGAGTCATGGGCAGAATTACAGAAGAATTCTGGTCGTAACCTTTGCTCTATaGCTGCCACCAAGGGCCATT +
Preference number: 5 (lower is better)
Translates to: YLLKFWRSHGQNYRRILVVTFAL*LPPRAI
Trigger: AATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC...GACCAGAATTCTTCTGTAATTCTGCCCATGACTCCTCCAGAATTTTAGTAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CAA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATGCCAACGGCCCTGGCTaGATTCATGGCATTTTAATG +
Preference number: 5 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHANGPG*IHGILM
Trigger: CATTAAAATGCCATGAATCAAGCCAGGGCCGTTGGC...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCT +
Preference number: 5 (lower is better)
Translates to: KEHCEFFGKTFVCSTHKLGSYVA*AQFLIS
Trigger: AGAGATGAGAAACTGAGCCAAGGCCACATAGCTACC...AAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTGAAAAGCTAAATAAGTaGGAGGCAAACCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: LVFTKRYASSPREVHERSEKLNK*EANLER
Trigger: CCTCTCCAGGTTTGCCTCCAACTTATTTAGCTTTTC...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CAA 90 bp CTAGGTCAGAACAAGCATTTGAGAGTGGAGAACTACTTTCCTGATTCCACTGATCTCTACTCCAGTTTATaGTTGGTCTACGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: LGQNKHLRVENYFPDSTDLYSSL*LVYGKR
Trigger: CCTTTTCCCGTAGACCAACAATAAACTGGAGTAGAG...ATCAGTGGAATCAGGAAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATGCTTGTGATCATTTTTaGATAATGCGGAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHACDHF*IMRKAR
Trigger: CCTTGCCTTCCGCATTATCAAAAAATGATCACAAGC...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTGCTTGTGATCATTTTTaGATAATGCGGAAGGCAAGG +
Preference number: 5 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFACDHF*IMRKAR
Trigger: CCTTGCCTTCCGCATTATCAAAAAATGATCACAAGC...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: LEKRLFALLTSFILVACISWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTAGGACAAATGTTCATGGGGGTTGTTGCTCACATGTTTTCCTATGGCTGGTTTCAAGACTGTCTATACTaGAGAGGGTTTCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: LGQMFMGVVAHMFSYGWFQDCLY*RGFQNW
Trigger: CCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTG...AAACCAGCCATAGGAAAACATGTGAGCAACAACCCCCATGAACATTTGTCCTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGCAAGACTGTCTATACTaGAGAGGGTTTCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKQDCLY*RGFQNW
Trigger: CCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTG...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: LFFAEGLADCILDGKTKGNGLSL*NAPEVE
Trigger: CTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATT...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGCTCTATTGCTGCCACCAAGGGCCATTTTGTGGGATGTGGTAACTTTAAGAATTTCAGAATATTTCTCTaGGTCTGGAAATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: CSIAATKGHFVGCGNFKNFRIFL*VWKCSH
Trigger: GTGGCTACATTTCCAGACCAAGAGAAATATTCTGAA...ATTCTTAAAGTTACCACATCCCACAAAATGGCCCTTGGTGGCAGCAATAGAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGTTCTTTGCTGAAGGTCTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCCCTCCCTGGACTTCTTaGTATCAGCAGAATTTACAG +
Preference number: 5 (lower is better)
Translates to: LFFAEGLADCILDGKTKGPPWTS*YQQNLQ
Trigger: CTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGG...GCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAGACCTTCAGCAAAGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ATTCTGCTGGAATTATCTCTTGTCTCTGCAGCTGCTGGTTCTATCTTCTCTCTTGGTCAGAACAAGCATTaGAGAGTGGAGAACTACTTT +
Preference number: 5 (lower is better)
Translates to: ILLELSLVSAAAGSIFSLGQNKH*RVENYF
Trigger: AAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACC...AAGAGAGAAGATAGAACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCAGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: LEKRLFALLTSFILVACICWNYL*SLQLLV
Trigger: AACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCA...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGCTGGAATTATCTCTaGTCTCTGCAGCTGCTGGTT +
Preference number: 5 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPCWNYL*SLQLLV
Trigger: AACCAGCAGCTGCAGAGACAAGAGATAATTCCAGCA...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATAAATGTTCATGGGGGTaGTTGCTCACATGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYKCSWG*LLTCFP
Trigger: AGGAAAACATGTGAGCAACAACCCCCATGAACATTT...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTAAATGTTCATGGGGGTaGTTGCTCACATGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LVFTKRYASSPREVHERSKCSWG*LLTCFP
Trigger: AGGAAAACATGTGAGCAACAACCCCCATGAACATTT...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNSQASS*WHVFRA
Trigger: AGCTCTGAATACATGCCACAAGGATGAAGCTTGTGA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCACCACCAAGGGCCATTTaGTGGGATGTGGTAACTTTA +
Preference number: 5 (lower is better)
Translates to: NSLEKRLFALLTSFILVAPPRAI*WDVVTL
Trigger: TAAAGTTACCACATCCCACAAAATGGCCCTTGGTGG...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCGTAACCTTTGCTCTATaGCTGCCACCAAGGGCCATT +
Preference number: 5 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCVTFAL*LPPRAI
Trigger: AATGGCCCTTGGTGGCAGCAATAGAGCAAAGGTTAC...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGCCAACGGCCCTGGCTaGATTCATGGCATTTTAATG +
Preference number: 5 (lower is better)
Translates to: TVNSLEKRLFALLTSFILANGPG*IHGILM
Trigger: CATTAAAATGCCATGAATCAAGCCAGGGCCGTTGGC...AAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTTCTCATCTCTAAAGTGGAGACAAAAATACCCATGGTTTGGGTGGCTGGTCAGGTATTTTTAGTAGAGTaGGGCTCTTGCCATATTACC +
Preference number: 5 (lower is better)
Translates to: FLISKVETKIPMVWVAGQVFLVE*GSCHIT
Trigger: GGTAATATGGCAAGAGCCCAACTCTACTAAAAATAC...CTGACCAGCCACCCAAACCATGGGTATTTTTGTCTCCACTTTAGAGATGAGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CAA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCTGGATCTCCAGTTTATaGTTGGTCTACGGGAAAAGG +
Preference number: 5 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGWISSL*LVYGKR
Trigger: CCTTTTCCCGTAGACCAACAATAAACTGGAGATCCA...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CAA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCAGCTCCAGTTTATTGTaGGTCTACGGGAAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGSSSLL*VYGKRE
Trigger: TTCCCTTTTCCCGTAGACCAACAATAAACTGGAGCT...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS-3UTR CAA 90 bp CTAGCTGACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATTACTCCAGTTTATTGTaGGTCTACGGGAAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LADCILDGKTKGVATGTHYSSLL*VYGKRE
Trigger: TTCCCTTTTCCCGTAGACCAACAATAAACTGGAGTA...ATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTCAGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670318.1
CDS-3UTR CAA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTCAAGACTGTCTATACTaGAGAGGGTTTCAGAATTGG +
Preference number: 5 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGQDCLY*RGFQNW
Trigger: CCAATTCTGAAACCCTCTCAAGTATAGACAGTCTTG...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHNGLSL*NAPEVE
Trigger: CTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATT...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTAATGGTCTCTCTCTTTaGAATGCTCCAGAAGTGGAG +
Preference number: 5 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPNGLSL*NAPEVE
Trigger: CTCCACTTCTGGAGCATTCAAAAGAGAGAGACCATT...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTAGACGGATTCTGCTGGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGG +
Preference number: 5 (lower is better)
Translates to: MHLVLGKYMKGLLRRILLEVLWD*LNLNVG
Trigger: CCCAACATTTAAATTTAGCAAATCCCAAAGCACTTC...CAGCAGAATCCGTCTAAGAAGACCTTTCATGTACTTCCCTAGGACTAGATGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTGAATGTGGAATTGTaGAGAATGCTGTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: YSQASSLWHVFRARLCPALNVEL*RMLLSC
Trigger: ACAACTCAACAGCATTCTCAACAATTCCACATTCAA...AGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTTTGAATGTGGAATTGTaGAGAATGCTGTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: LYSQASSLWHVFRARLCPLNVEL*RMLLSC
Trigger: ACAACTCAACAGCATTCTCAACAATTCCACATTCAA...AGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCCTCCCTGGACTTCTTaGTATCAGCAGAATTTACAG +
Preference number: 5 (lower is better)
Translates to: LEKRLFALLTSFILVACIPPWTS*YQQNLQ
Trigger: CTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGG...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATTTTTGCTCTACCTCTTaGTGGCTTACCTTGCTTAGT +
Preference number: 5 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNFCSTS*WLTLLS
Trigger: ACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCAAAA...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTATTTTGCTCTACCTCTTaGTGGCTTACCTTGCTTAGT +
Preference number: 5 (lower is better)
Translates to: DCILDGKTKGVATGTHEVFCSTS*WLTLLS
Trigger: ACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCAAAA...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTGCTTGCAGACTGTGGTaGAATGACAGCGCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVACRLW*NDSAFS
Trigger: AGAAAAGGCGCTGTCATTCAACCACAGTCTGCAAGC...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTTCTGAGTTTCCTCCAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTTCAGGAGTTACTGGTaGACACTGAGACACTTGTAT +
Preference number: 5 (lower is better)
Translates to: FLSFLQFKLEHIFASSQGFRSYW*TLRHLY
Trigger: ATACAAGTGTCTCAGTGTCAACCAGTAACTCCTGAA...ACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTGGAGGAAACTCAGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTGTAGCCCTCTTATTTaGATGCAGGACATTAGGACC +
Preference number: 5 (lower is better)
Translates to: GILRTLLNFTALLNVTALCSPLI*MQDIRT
Trigger: GGTCCTAATGTCCTGCATCAAAATAAGAGGGCTACA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATCTACTAAAATTCTGGAGGAGTCATGGGCAGAATTACAGAAGAATTCTGGTCTGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: YLLKFWRSHGQNYRRILVCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...GACCAGAATTCTTCTGTAATTCTGCCCATGACTCCTCCAGAATTTTAGTAGATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CAA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTAAATGTTCATGGGGGTaGTTGCTCACATGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLKCSWG*LLTCFP
Trigger: AGGAAAACATGTGAGCAACAACCCCCATGAACATTT...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCTGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 5 (lower is better)
Translates to: KRLFALLTSFILVACIQSSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 5 (lower is better)
Translates to: LVFTKRYASSPREVHERSSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...AGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTGGTAGCTATGTGGCCTaGGCTCAGTTTCTCATCTCT +
Preference number: 5 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVGSYVA*AQFLIS
Trigger: AGAGATGAGAAACTGAGCCAAGGCCACATAGCTACC...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGAAAGAACATGGGTTTaGGAACTAGATAAACCTGAG +
Preference number: 5 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGERTWV*ELDKPE
Trigger: CTCAGGTTTATCTAGTTCCAAAACCCATGTTCTTTC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGAAAGAACATGGGTTTaGGAACTAGATAAACCTGAG +
Preference number: 5 (lower is better)
Translates to: VCSTHKLHPCGMYSELGYERTWV*ELDKPE
Trigger: CTCAGGTTTATCTAGTTCCAAAACCCATGTTCTTTC...ATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTGTAGCTAGGAAGAATTaGGAAGTGGTGGGACCGCAA +
Preference number: 5 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVVARKN*EVVGPQ
Trigger: TTGCGGTCCCACCACTTCCAAATTCTTCCTAGCTAC...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CAA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCAGAAAAGCTAAATAAGTaGGAGGCAAACCTGGAGAGG +
Preference number: 5 (lower is better)
Translates to: NSLEKRLFALLTSFILVAEKLNK*EANLER
Trigger: CCTCTCCAGGTTTGCCTCCAACTTATTTAGCTTTTC...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS-3UTR CAA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCAAGCTGGAACACATTTTaGCTAGTAGCCAAGGTTGCC +
Preference number: 5 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPSWNTF*LVAKVA
Trigger: GGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCT...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGG +
Preference number: 5 (lower is better)
Translates to: SSLWHVFRARLCPAFCLGEVLWD*LNLNVG
Trigger: CCCAACATTTAAATTTAGCAAATCCCAAAGCACTTC...GCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGTTCAGAATATTTCTCTaGGTCTGGAAATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEFRIFL*VWKCSH
Trigger: GTGGCTACATTTCCAGACCAAGAGAAATATTCTGAA...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CAGTTTAAGCTGGAACACATTTTTGCTAGTAGCCAAGGTTGCCCTCATGTTTTCGAGAATGCTGTTGAGTaGTTCCTGTTTTATTCTTCA +
Preference number: 5 (lower is better)
Translates to: QFKLEHIFASSQGCPHVFENAVE*FLFYSS
Trigger: TGAAGAATAAAACAGGAACAACTCAACAGCATTCTC...GAAAACATGAGGGCAACCTTGGCTACTAGCAAAAATGTGTTCCAGCTTAAACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTACTTTGAATGTGGAATaGTTGAGAATGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: LLYSQASSLWHVFRARLCTLNVE*LRMLLS
Trigger: ACTCAACAGCATTCTCAACAATTCCACATTCAAAGT...ACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTCCTCCCTGGACTTCTTaGTATCAGCAGAATTTACAG +
Preference number: 5 (lower is better)
Translates to: TVNSLEKRLFALLTSFILPPWTS*YQQNLQ
Trigger: CTGTAAATTCTGCTGATACAAAGAAGTCCAGGGAGG...AAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATTCTTTGTGGCTTACCTaGCTTAGTTTTAGAATCATC +
Preference number: 5 (lower is better)
Translates to: LWHVFRARLCPAFCLGRHSLWLT*LSFRII
Trigger: GATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGA...ATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTTCAGGAGTTACTGGTaGACACTGAGACACTTGTAT +
Preference number: 5 (lower is better)
Translates to: HCEFFGKTFVCSTHKLHPFRSYW*TLRHLY
Trigger: ATACAAGTGTCTCAGTGTCAACCAGTAACTCCTGAA...AGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGTGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSEWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 5 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGCAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: KRLFALLTSFILVACIQSSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...GCTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GAGTGGAGAACTACTTTCCTGATTCCACTGATTCAAACTGTGTTCTGTTGGAAGAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: EWRTTFLIPLIQTVFCWKSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...CTTCCAACAGAACACAGTTTGAATCAGTGGAATCAGGAAAGTAGTTCTCCACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCCACATACCACCAAGCTaGGCTGTTTTCTTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: EFFGKTFVCSTHKLHPCGHIPPS*AVFFSF
Trigger: AAAAGAAAAGAAAACAGCCAAGCTTGGTGGTATGTG...GCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000263468.13
CDS-3UTR CAA 90 bp TGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAGGCAGGCATAATGAAGTGCTTTGGGATTaGCTAAATTTAAATGTTGGG +
Preference number: 5 (lower is better)
Translates to: WHVFRARLCPAFCLGRHNEVLWD*LNLNVG
Trigger: CCCAACATTTAAATTTAGCAAATCCCAAAGCACTTC...ATTATGCCTGCCTAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAGAGAATGCTGTTGAGTaGTTCCTGTTTTATTCTTCA +
Preference number: 5 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVENAVE*FLFYSS
Trigger: TGAAGAATAAAACAGGAACAACTCAACAGCATTCTC...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTAACTTTGAATGTGGAATaGTTGAGAATGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLTLNVE*LRMLLS
Trigger: ACTCAACAGCATTCTCAACAATTCCACATTCAAAGT...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GCAAAGGAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGACTTTGAATGTGGAATaGTTGAGAATGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: AKEHCEFFGKTFVCSTHKTLNVE*LRMLLS
Trigger: ACTCAACAGCATTCTCAACAATTCCACATTCAAAGT...CTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTCCTTTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTCAGAGACTTTGAATGTGGAATaGTTGAGAATGCTGTTGAGT +
Preference number: 5 (lower is better)
Translates to: KTFVCSTHKLHPCGMYSETLNVE*LRMLLS
Trigger: ACTCAACAGCATTCTCAACAATTCCACATTCAAAGT...CTCTGAATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GCTTCATCCTTGTGGCATGTATTCAGAGCTAGGTTATGTCCTGCTTTTTGTTTATCTTTGTGGCTTACCTaGCTTAGTTTTAGAATCATC +
Preference number: 5 (lower is better)
Translates to: ASSLWHVFRARLCPAFCLSLWLT*LSFRII
Trigger: GATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGA...TAAACAAAAAGCAGGACATAACCTAGCTCTGAATACATGCCACAAGGATGAAGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTTTTGCTCTACCTCTTaGTGGCTTACCTTGCTTAGT +
Preference number: 5 (lower is better)
Translates to: SWYSQNSVKLHCFVKCHCFCSTS*WLTLLS
Trigger: ACTAAGCAAGGTAAGCCACAAAGAGGTAGAGCAAAA...GCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AGGCATAATGTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTCAGGAGTTACTGGTaGACACTGAGACACTTGTAT +
Preference number: 5 (lower is better)
Translates to: RHNVFHGILRTLLNFTALFRSYW*TLRHLY
Trigger: ATACAAGTGTCTCAGTGTCAACCAGTAACTCCTGAA...CAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGACATTATGCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGGTCAGAACAAGCATTaGAGAGTGGAGAACTACTTT +
Preference number: 5 (lower is better)
Translates to: TVNSLEKRLFALLTSFILGQNKH*RVENYF
Trigger: AAAGTAGTTCTCCACTCTCAAATGCTTGTTCTGACC...AAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCATGTTCATGGGGGTTGTaGCTCACATGTTTTCCTATG +
Preference number: 5 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPCSWGL*LTCFPM
Trigger: CATAGGAAAACATGTGAGCAACAACCCCCATGAACA...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTTCACAAGCTTCATCCTaGTGGCATGTATTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVSQASS*WHVFRA
Trigger: AGCTCTGAATACATGCCACAAGGATGAAGCTTGTGA...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp AATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: NSLEKRLFALLTSFILVAWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...TGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTCTTTGGAAAAACGTTaGTTTGCTCTACTCACAAGC +
Preference number: 5 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHSLEKR*FALLTS
Trigger: GCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp CTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTAAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: LWKNVCLLYSQASSLWHVSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...TACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TGGTTTTCACAAAACGGTATGCATCTAGTCCTAGGGAAGTACATGAAAGGTCTTAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: WFSQNGMHLVLGKYMKGLSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...AAGACCTTTCATGTACTTCCCTAGGACTAGATGCATACCGTTTTGTGAAAACCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GACTGTATATTAGATGGCAAAACTAAAGGCGTTGCCACTGGTACACATGAAGTAAGCACTGTGAATTCTTaGGAAAAACGTTTGTTTGCT +
Preference number: 5 (lower is better)
Translates to: DCILDGKTKGVATGTHEVSTVNS*EKRLFA
Trigger: AGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCT...TACTTCATGTGTACCAGTGGCAACGCCTTTAGTTTTGCCATCTAATATACAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATCCTTGTGGCATGTATTGAAAGAACATGGGTTTaGGAACTAGATAAACCTGAG +
Preference number: 5 (lower is better)
Translates to: LEKRLFALLTSFILVACIERTWV*ELDKPE
Trigger: CTCAGGTTTATCTAGTTCCAAAACCCATGTTCTTTC...AATACATGCCACAAGGATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCAATCTCCAGTTTATTGTaGGTCTACGGGAAAAGGGAA +
Preference number: 5 (lower is better)
Translates to: LSSTNMGGLDTKGTELLAISSLL*VYGKRE
Trigger: TTCCCTTTTCCCGTAGACCAACAATAAACTGGAGAT...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS-3UTR CAA 90 bp GAGCACTGTGAATTCTTTGGAAAAACGTTTGTTTGCTCTACTCACAAGCTTCATTTGAATGTGGAATTGTaGAGAATGCTGTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: EHCEFFGKTFVCSTHKLHLNVEL*RMLLSC
Trigger: ACAACTCAACAGCATTCTCAACAATTCCACATTCAA...ATGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCAAAGAATTCACAGTGCTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTCTTTGTGGCTTACCTaGCTTAGTTTTAGAATCATC +
Preference number: 5 (lower is better)
Translates to: GILRTLLNFTALLNVTALSLWLT*LSFRII
Trigger: GATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGA...CAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCTTCAGGAGTTACTGGTaGACACTGAGACACTTGTAT +
Preference number: 5 (lower is better)
Translates to: VFHGILRTLLNFTALLNVFRSYW*TLRHLY
Trigger: ATACAAGTGTCTCAGTGTCAACCAGTAACTCCTGAA...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCAAATGTTCATGGGGGTaGTTGCTCACATGTTTTCCT +
Preference number: 5 (lower is better)
Translates to: VFHGILRTLLNFTALLNVKCSWG*LLTCFP
Trigger: AGGAAAACATGTGAGCAACAACCCCCATGAACATTT...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTTTCAGAATATTTCTCTaGGTCTGGAAATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVFRIFL*VWKCSH
Trigger: GTGGCTACATTTCCAGACCAAGAGAAATATTCTGAA...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp ACACTTTGTCCAAAATTATTAATTTGCTCACTGTACTTCTGTCCTACAGATCCATTCAGAATATTTCTCTaGGTCTGGAAATGTAGCCAC +
Preference number: 5 (lower is better)
Translates to: TLCPKLLICSLYFCPTDPFRIFL*VWKCSH
Trigger: GTGGCTACATTTCCAGACCAAGAGAAATATTCTGAA...TGGATCTGTAGGACAGAAGTACAGTGAGCAAATTAATAATTTTGGACAAAGTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TTATCTAGTACAAACATGGGTGGGCTAGATACAAAGGGTACTGAATTATTAGCATCTTTGTGGCTTACCTaGCTTAGTTTTAGAATCATC +
Preference number: 5 (lower is better)
Translates to: LSSTNMGGLDTKGTELLASLWLT*LSFRII
Trigger: GATGATTCTAAAACTAAGCAAGGTAAGCCACAAAGA...TGCTAATAATTCAGTACCCTTTGTATCTAGCCCACCCATGTTTGTACTAGATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp TATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCACTGCTCTGTTTGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: YSQNSVKLHCFVKCHCSVWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...AACAGAGCAGTGACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCTGGAAAAACGTTTGTTaGCTCTACTCACAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: VFHGILRTLLNFTALLNVWKNVC*LYSQAS
Trigger: TGAAGCTTGTGAGTAGAGCAAACAAACGTTTTTCCA...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000263468.13
ENST00000532077.1
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS-3UTR CAA 90 bp GTCTTTCATGGTATTCTCAGAACTCTGTTAAACTTCACTGCTTTGTTAAATGTCTTGAATGTGGAATTGTaGAGAATGCTGTTGAGTTGT +
Preference number: 5 (lower is better)
Translates to: VFHGILRTLLNFTALLNVLNVEL*RMLLSC
Trigger: ACAACTCAACAGCATTCTCAACAATTCCACATTCAA...GACATTTAACAAAGCAGTGAAGTTTAACAGAGTTCTGAGAATACCATGAAAGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000263468.13
ENST00000532529.1
ENST00000670091.1
ENST00000670318.1
CDS CAA 72 bp CCGTCTCTCAGGCCCCGCGTCACGGGCGCGGAAGGGTaGGCCTCGACAGCCCTAGCTCCCGCGCAGCGGCAC +
Preference number: 6 (lower is better)
Translates to: PSLRPRVTGAEG*ASTALAPAQRH
Trigger: GTGCCGCTGCGCGGGAGCTAGGGCTGTCGAGGCCAACCCTTCCGCGCCCGTGACGCGGGGCCTGAGAGACGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS CAA 90 bp CCCTACACTCCGTCTCTCAGGCCCCGCGTCACGGGCGCGGAAGGGTaGGCCTCGACAGCCCTAGCTCCCGCGCAGCGGCACTGGTGCCTG +
Preference number: 6 (lower is better)
Translates to: PYTPSLRPRVTGAEG*ASTALAPAQRHWCL
Trigger: CAGGCACCAGTGCCGCTGCGCGGGAGCTAGGGCTGTCGAGGCCAACCCTTCCGCGCCCGTGACGCGGGGCCTGAGAGACGGAGTGTAGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS GCA 72 bp TCCCCGCCAGCATCCTTCACTTCAGCGCCGCCTGTCTaGTCGCCCCCAGAACCTCCCTCATGGCAGCTCCGG +
Preference number: 6 (lower is better)
Translates to: SPPASFTSAPPV*SPPEPPSWQLR
Trigger: CCGGAGCTGCCATGAGGGAGGTTCTGGGGGCGAGCAGACAGGCGGCGCTGAAGTGAAGGATGCTGGCGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000263468.13
ENST00000670091.1
ENST00000670318.1
CDS CAA 90 bp ATGGGGCTGGCGGGCAGGAGAAACAGTTGGGTAGCTAGGAAGAATTaGGAAGTGGTGGGACCGCAATGGGACCCGTGGAGGAGACAGTTG +
Preference number: 6 (lower is better)
Translates to: MGLAGRRNSWVARKN*EVVGPQWDPWRRQL
Trigger: CAACTGTCTCCTCCACGGGTCCCATTGCGGTCCCACCACTTCCAAATTCTTCCTAGCTACCCAACTGTTTCTCCTGCCCGCCAGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS CAA 72 bp GCGGGCAGGAGAAACAGTTGGGTAGCTAGGAAGAATTaGGAAGTGGTGGGACCGCAATGGGACCCGTGGAGG +
Preference number: 6 (lower is better)
Translates to: AGRRNSWVARKN*EVVGPQWDPWR
Trigger: CCTCCACGGGTCCCATTGCGGTCCCACCACTTCCAAATTCTTCCTAGCTACCCAACTGTTTCTCCTGCCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS CCA 72 bp AGGCAGTATATGGGGCTGGCGGGCAGGAGAAACAGTTaGGTAGCTAGGAAGAATTTGGAAGTGGTGGGACCG +
Preference number: 6 (lower is better)
Translates to: RQYMGLAGRRNS*VARKNLEVVGP
Trigger: CGGTCCCACCACTTCCAAATTCTTCCTAGCTACCCAACTGTTTCTCCTGCCCGCCAGCCCCATATACTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS CCA 72 bp GGAAGGCTTCAAAACAGGGAGAGGTTCCAAAGGGGTTaGGGAAACAACCAGTGGAGCTGGAAGGGAACGACG +
Preference number: 6 (lower is better)
Translates to: GRLQNRERFQRG*GNNQWSWKGTT
Trigger: CGTCGTTCCCTTCCAGCTCCACTGGTTGTTTCCCCAACCCCTTTGGAACCTCTCCCTGTTTTGAAGCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS CCA 72 bp TGGTGCAAAGGTCTTTGGAAGAGTAGAGGGTACAGATaGATGGATAGGCAGTATATGGGGCTGGCGGGCAGG +
Preference number: 6 (lower is better)
Translates to: WCKGLWKSRGYR*MDRQYMGLAGR
Trigger: CCTGCCCGCCAGCCCCATATACTGCCTATCCATCCATCTGTACCCTCTACTCTTCCAAAGACCTTTGCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS TCA 72 bp AATGCTGTGGCTTGTGGAACAGATTGCTGGACTGACTaGAAAGGATCCAAGCTAGCAGGATGTGCAGGCAAC +
Preference number: 6 (lower is better)
Translates to: NAVACGTDCWTD*KGSKLAGCAGN
Trigger: GTTGCCTGCACATCCTGCTAGCTTGGATCCTTTTCAGTCAGTCCAGCAATCTGTTCCACAAGCCACAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000532529.1
ENST00000670091.1
CDS CCA 72 bp GGAAGGCTTCAAAACAGGGAGAGGTTCCAAAGGGGTTaGGGAAACAACCAGTGGAGCTCCAGTTTATTGTTG +
Preference number: 6 (lower is better)
Translates to: GRLQNRERFQRG*GNNQWSSSLLL
Trigger: CAACAATAAACTGGAGCTCCACTGGTTGTTTCCCCAACCCCTTTGGAACCTCTCCCTGTTTTGAAGCCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000670091.1
CDS CCA 72 bp AGGGAAACTGCTAGAAATGCTGGAAGTAGCCGGGGTTaGAGGACAAGGATGATATTTAATTGGGTAAGGCAG +
Preference number: 6 (lower is better)
Translates to: RETARNAGSSRG*RTRMIFNWVRQ
Trigger: CTGCCTTACCCAATTAAATATCATCCTTGTCCTCCAACCCCGGCTACTTCCAGCATTTCTAGCAGTTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532529.1
CDS CAA 72 bp TCCACTTTCTTCTCTTCTCTTCTCTACTCCAGTTTATaGTTGGTCTACGGGAAAAGGGAAGGTTTACTTCTG +
Preference number: 6 (lower is better)
Translates to: STFFSSLLYSSL*LVYGKREGLLL
Trigger: CAGAAGTAAACCTTCCCTTTTCCCGTAGACCAACAATAAACTGGAGTAGAGAAGAGAAGAGAAGAAAGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000670318.1