RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEP120 (Homo sapiens)

Ensembl gene IDs: ENSG00000168944

Ensembl transcript IDs: ENST00000306467.10, ENST00000306481.11, ENST00000328236.10, ENST00000503049.2, ENST00000508138.5, ENST00000508442.7, ENST00000513565.6, ENST00000674620.1, ENST00000674667.1, ENST00000674684.1, ENST00000675003.1, ENST00000675104.1, ENST00000675330.1, ENST00000675409.1, ENST00000675442.1, ENST00000675444.1, ENST00000675686.1, ENST00000675814.1, ENST00000675852.1, ENST00000676384.1

Found 1998 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTGTCCTGAAGCTACTTCTGAAGCATTGGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACAGAAGAACTGGCTTTTGGATTTGGT +
Preference number: 1 (lower is better)
Translates to: FCPEATSEALDVVTS*ASEAGTEELAFGFG
Trigger: ACCAAATCCAAAAGCCAGTTCTTCTGTACCTGCTTCACTGGCCCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGCTTCAGGACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR CCA 90 bp TCCATCTCGAGGGGGAGCCCCCTTTGCTTTAAAGCTATCCACTGGTaGCTTTGTATCGGTTTCCAAAGCAATACTTATCTGTATCTCAGA +
Preference number: 1 (lower is better)
Translates to: SISRGSPLCFKAIHW*LCIGFQSNTYLYLR
Trigger: TCTGAGATACAGATAAGTATTGCTTTGGAAACCGATACAAAGCCACCAGTGGATAGCTTTAAAGCAAAGGGGGCTCCCCCTCGAGATGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR GCA 90 bp CTGTTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTGCCCTTTTTAAGTAATCCAGTTAAA +
Preference number: 1 (lower is better)
Translates to: LFGGSRVKAPSTVTG*WLISVLPFLSNPVK
Trigger: TTTAACTGGATTACTTAAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR CCA 90 bp TTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCCTTTTTAAGTAATCCAGTTAAAGGT +
Preference number: 1 (lower is better)
Translates to: FGGSRVKAPSTVTGC*LISVLPFLSNPVKG
Trigger: ACCTTTAACTGGATTACTTAAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR TCA 90 bp TCCTCTTCGAGCTGTTTGATTTTTAACCTTTCTAGTTCTACTTGGTaGATACAGTCCTCTTTGGCCCTACGGATAGAGTCCTGCAGTTCT +
Preference number: 1 (lower is better)
Translates to: SSSSCLIFNLSSSTW*IQSSLALRIESCSS
Trigger: AGAACTGCAGGACTCTATCCGTAGGGCCAAAGAGGACTGTATTCACCAAGTAGAACTAGAAAGGTTAAAAATCAAACAGCTCGAAGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR CCA 90 bp GCTTTGTTTCTTGAGCGGTTCTTAAATCCAGAACGATGTAACCTATaGTTTCCTTGGCTGAAGTTACAGGATCCAAGGCAAAACATTGGA +
Preference number: 1 (lower is better)
Translates to: ALFLERFLNPERCNL*FPWLKLQDPRQNIG
Trigger: TCCAATGTTTTGCCTTGGATCCTGTAACTTCAGCCAAGGAAACCATAGGTTACATCGTTCTGGATTTAAGAACCGCTCAAGAAACAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR TCA 90 bp ATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTaGTTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATC +
Preference number: 1 (lower is better)
Translates to: ISLICRSSSLIIRSS*LYTPVLIKVSLSSI
Trigger: GATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR TCA 90 bp CCAAATGTTATTAATTACTGGCATTGCTTTTTGCCAAAATCTCTCTaGTCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTAT +
Preference number: 1 (lower is better)
Translates to: PNVINYWHCFLPKSL*SVGRVHLLFDPRDY
Trigger: ATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGTAATTAATAACATTTGG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR TCA 90 bp GCTTTGTATCGGTTTCCAAAGCAATACTTATCTGTATCTCAGACTTaGATTTGGTGTATTTATTACTCAGCAACTGGTACCATTTTGGTG +
Preference number: 1 (lower is better)
Translates to: ALYRFPKQYLSVSQT*IWCIYYSATGTILV
Trigger: CACCAAAATGGTACCAGTTGCTGAGTAATAAATACACCAAATTCAAGTCTGAGATACAGATAAGTATTGCTTTGGAAACCGATACAAAGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR TCA 90 bp TCTGTTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: SVWRVKGKSTFDCDWVLVATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...AACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCCTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: SCSLCLSLASSFKARPHCLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAACTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: LYSNVSRGSVWISEGQGAQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCTTCTGTACTTCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTAFCTSK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGAAGTACAGAA...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGGGAGGTGACTGGTTGTaGGATGGAACAGGGGACACT +
Preference number: 2 (lower is better)
Translates to: FKSGKFFQSSSPLLLVMQGGDWL*DGTGDT
Trigger: AGTGTCCCCTGTTCCATCTCACAACCAGTCACCTCC...CTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACA +
Preference number: 2 (lower is better)
Translates to: SCSLCLSLASSFKARPHCDVVTS*ASEAGT
Trigger: TGTACCTGCTTCACTGGCCCAGCTAGTGACTACATC...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGCTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQALCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 2 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSAREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCACACTAGCAAGCTGCTaGTCTCGCTTCTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGTLASC*SRFSKS
Trigger: TGACTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGT...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTCAAGTCCAGCCAGGATaGCAGGTACTAGCACCTAGA +
Preference number: 2 (lower is better)
Translates to: LYSNVSRGSVWISEGQGAQVQPG*QVLAPR
Trigger: TCTAGGTGCTAGTACCTGCCATCCTGGCTGGACTTG...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508138.5
3UTR-3UTR CCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCACCTTCGACTGTGACTaGGTGCTGGTTGATTTCTGT +
Preference number: 2 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTATFDCD*VLVDFC
Trigger: ACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGT...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATTCACGAGGCTCTGTCTaGATCTCTGAAGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHSRGSV*ISEGQG
Trigger: ACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGA...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR CAA 90 bp GTTGCTGGTACAGCAATCTTCTGTCCTGAAGCTACTTCTGAAGCATaGGATGTAGTCACTAGCTGGGCCAGTGAAGCAGGTACAGAAGAA +
Preference number: 2 (lower is better)
Translates to: VAGTAIFCPEATSEA*DVVTSWASEAGTEE
Trigger: TTCTTCTGTACCTGCTTCACTGGCCCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGCTTCAGGACAGAAGATTGCTGTACCAGCAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCTGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGTCTTGCAGGTTCCGCTaGCGTTCTGATTGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQASCRFR*RSDCSS
Trigger: GGAACTGCAATCAGAACGTCAGCGGAACCTGCAAGA...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTCAGTACAGTATTCTaGTGGTCCAATCTGATGGTA +
Preference number: 2 (lower is better)
Translates to: GGSRVKAPSTVTGCWLISVSTVF*WSNLMV
Trigger: TACCATCAGATTGGACCAGCAGAATACTGTACTGAC...AGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 2 (lower is better)
Translates to: SLCHSSTSNGILKKVSCSSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...GCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGTCCACACTAGCAAGCTaGTGCTCTCGCTTCTCCAAG +
Preference number: 2 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGSTLAS*CSRFSK
Trigger: CTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGTGGA...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCCTACGGATAGAGTCCTaGAGTTCTTGCAGGTTCCGC +
Preference number: 2 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCLRIES*SSCRFR
Trigger: GCGGAACCTGCAAGAACTGCAGGACTCTATCCGTAG...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCCTTCTACGGATAGAGTCCTaGAGTTCTTGCAGGTTCCGC +
Preference number: 2 (lower is better)
Translates to: SQIIIQTFFQYTAMGAILLRIES*SSCRFR
Trigger: GCGGAACCTGCAAGAACTGCAGGACTCTATCCGTAG...AAGGATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAACAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: SCGFSALILLCFQTCHLQQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCC +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVTVTGC*LISVLP
Trigger: GGGCAGTACAGAAATCAACCAGCACCCAGTCACAGT...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTACCTTCGACTGTGACTaGGTGCTGGTTGATTTCTGT +
Preference number: 2 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSATFDCD*VLVDFC
Trigger: ACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGT...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCTGTTTGGCTCTGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGLFGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAG...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAAGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAATCTTTTGTTGGAGGTaGCTGGTTGTGAGATGGAAC +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKIFCWR*LVVRWN
Trigger: GTTCCATCTCACAACCAGTCACCTCCAACAAAAGAT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCACGGCAGATACACCCTaGGATGAATCAGAGATAAAA +
Preference number: 2 (lower is better)
Translates to: SCSLCLSLASSFKARPHCTADTP*DESEIK
Trigger: TTTTATCTCTGATTCATCTCAGGGTGTATCTGCCGT...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATTTCTCTTTGAAGCTCTaGTTCCACACTAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHFSLKL*FHTSKL
Trigger: CAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAA...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCGTCAGTACAGTATTCTaGTGGTCCAATCTGATGGTA +
Preference number: 2 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTAVSTVF*WSNLMV
Trigger: TACCATCAGATTGGACCAGCAGAATACTGTACTGAC...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTTCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTG +
Preference number: 2 (lower is better)
Translates to: LYSNVSRGSVWISEGQGASTVTG*WLISVL
Trigger: CAGTACAGAAATCAACCAGCACCCAGTCACAGTCGA...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCATCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 2 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATTCCACACTAGCAAGCTaGTGCTCTCGCTTCTCCAAG +
Preference number: 2 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYSTLAS*CSRFSK
Trigger: CTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGTGGA...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTCTACGGATAGAGTCCTaGAGTTCTTGCAGGTTCCGC +
Preference number: 2 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILLRIES*SSCRFR
Trigger: GCGGAACCTGCAAGAACTGCAGGACTCTATCCGTAG...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKTQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACA +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQADVVTS*ASEAGT
Trigger: TGTACCTGCTTCACTGGCCCAGCTAGTGACTACATC...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCTCACGAGGCTCTGTCTaGATCTCTGAAGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCSRGSV*ISEGQG
Trigger: ACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGA...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTATTTGTTGGAGGTGACTaGGAGTCTATGCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVFVGGD*ESMPSL
Trigger: GAGAGAAGGCATAGACTCCCAGTCACCTCCAACAAA...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000674620.1
3UTR-3UTR TCA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTTGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACATCTTTTGTTGGAGGTaGCTGGTTGTGAGATGGAAC +
Preference number: 2 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHIFCWR*LVVRWN
Trigger: GTTCCATCTCACAACCAGTCACCTCCAACAAAAGAT...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATCTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 2 (lower is better)
Translates to: ISVESWYCFCSCCLNLFNLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...ATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTGCAAGAGCCTGCATATaGGCCAGTTCTTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASARACI*ASSFCF
Trigger: GAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGC...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTGCAAGAGCCTGCATATaGGCCAGTTCTTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILARACI*ASSFCF
Trigger: GAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGC...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTCTTGCAGGTTCCGCTaGCGTTCTGATTGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKSCRFR*RSDCSS
Trigger: GGAACTGCAATCAGAACGTCAGCGGAACCTGCAAGA...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGTTGCCAAAATCTCTCTaGTCTGTCGGTCGAGTTCAC +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQALPKSL*SVGRVH
Trigger: GTGAACTCGACCGACAGATCAGAGAGATTTTGGCAA...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 2 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVTQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAACAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 2 (lower is better)
Translates to: ELLRVFIQTGHCINPMSEQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCC +
Preference number: 2 (lower is better)
Translates to: HVFPNFYRRISHNRSCTSTVTGC*LISVLP
Trigger: GGGCAGTACAGAAATCAACCAGCACCCAGTCACAGT...GGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCACCTTCGACTGTGACTaGGTGCTGGTTGATTTCTGT +
Preference number: 2 (lower is better)
Translates to: PRDYTHPFSSKYPFLLSGTFDCD*VLVDFC
Trigger: ACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGT...GCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCAGGTACAGAAGAACTaGCTTTTGGATTTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGQVQKN*LLDLVW
Trigger: CCAAACCAAATCCAAAAGCCAGTTCTTCTGTACCTG...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GAAGAACTGGCTTTTGGATTTGGTTTGGTGTCCTTATCATACTGTAAACTTTCCGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: EELAFGFGLVSLSYCKLSATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...GGAAAGTTTACAGTATGATAAGGACACCAAACCAAATCCAAAAGCCAGTTCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTCTGTACTTCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: FFHLQSLWNPGIVFALVAFCTSK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGAAGTACAGAA...GGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAAGGGGACACTGTTGGTaGTTTTGGCCCAGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: FHLQSLWNPGIVFALVALRGHCW*FWPSKC
Trigger: ACACTTACTGGGCCAAAATCACCAACAGTGTCCCCT...TAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAGGGGACACTGTTGGTaGTTTTGGCCCAGTAAGTGT +
Preference number: 2 (lower is better)
Translates to: FPLAISVESWYCFCSCCLRGHCW*FWPSKC
Trigger: ACACTTACTGGGCCAAAATCACCAACAGTGTCCCCT...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGACGGCAGATACACCCTaGGATGAATCAGAGATAAAA +
Preference number: 2 (lower is better)
Translates to: LLCILTFHEALSGSLKDKTADTP*DESEIK
Trigger: TTTTATCTCTGATTCATCTCAGGGTGTATCTGCCGT...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGGCAAGAGCCTGCATATaGGCCAGTTCTTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKARACI*ASSFCF
Trigger: GAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGC...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATTCTTGCAGGTTCCGCTaGCGTTCTGATTGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANSCRFR*RSDCSS
Trigger: GGAACTGCAATCAGAACGTCAGCGGAACCTGCAAGA...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCTTGCAGGTTCCGCTaGCGTTCTGATTGCAGTTCC +
Preference number: 2 (lower is better)
Translates to: ISVESWYCFCSCCLNLFNSCRFR*RSDCSS
Trigger: GGAACTGCAATCAGAACGTCAGCGGAACCTGCAAGA...ATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATTGTTTTGCTGGTCCTTaGACTGTTGGAACTCTTTTT +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHCFAGP*TVGTLF
Trigger: AAAAAGAGTTCCAACAGTTCAAGGACCAGCAAAACA...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCCTTTTTGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: KSTFDCDWVLVDFCTALFVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...AAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: LLCILTFHEALSGSLKDKVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: LSDLSVEFTYYSILVIIHGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...GTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTCTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: FPLAISVESWYCFCSCCLLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTCACTTCACTTTCTGTTaGATCATCTTTTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSAHFTFC*IIFCWR
Trigger: CCTCCAACAAAAGATGATGCAACAGAAAGTGAAGTG...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATAGTTGCAAAATCAAATaGACAGTAAGACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHSCKIK*TVRLGK
Trigger: CTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACT...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 2 (lower is better)
Translates to: PFSSKYPFLLSGESNNHPREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...TGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GAAGAACTGGCTTTTGGATTTGGTTTGGTGTCCTTATCATACTGTAAACTTTCCAGGGGGAGCCCCCTTTaGTTTAAAGCTATCCACTGG +
Preference number: 2 (lower is better)
Translates to: EELAFGFGLVSLSYCKLSRGSPL*FKAIHW
Trigger: CCAGTGGATAGCTTTAAAGCAAAGGGGGCTCCCCCT...GGAAAGTTTACAGTATGATAAGGACACCAAACCAAATCCAAAAGCCAGTTCTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CCA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAAACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCC +
Preference number: 2 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKTVTGC*LISVLP
Trigger: GGGCAGTACAGAAATCAACCAGCACCCAGTCACAGT...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGCAGGTACAGAAGAACTaGCTTTTGGATTTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: FKSGKFFQSSSPLLLVMQQVQKN*LLDLVW
Trigger: CCAAACCAAATCCAAAAGCCAGTTCTTCTGTACCTG...CTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTAAGATGTTAGAAAGCTaGATTCTCGCAATTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSAKMLES*ILAIPR
Trigger: TCTGGGAATTGCGAGAATCCAGCTTTCTAACATCTT...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCATGGTACATGGAATTAACTGTTCCAACTGGGTAGCAAATGCTATGGTCACTGTAGCAAATTCTGGCTaGTCAGTGTGGTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: FMVHGINCSNWVANAMVTVANSG*SVWSTG
Trigger: TCCTGTGGACCACACTGACCAGCCAGAATTTGCTAC...AGTGACCATAGCATTTGCTACCCAGTTGGAACAGTTAATTCCATGTACCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CCA 90 bp CACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCCTCAGTAGCAAATTCTaGCTGGTCAGTGTGGTCCAC +
Preference number: 2 (lower is better)
Translates to: HLLFDPRDYTHPFSSKYPLSSKF*LVSVVH
Trigger: GTGGACCACACTGACCAGCCAGAATTTGCTACTGAG...GGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR TCA 90 bp CCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCTGTGGCTTCTCTGCACTaGTCTTGCTTTGTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: PCAIVQPVMESLRRCLAAVASLH*SCFVFK
Trigger: TTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCAC...AGCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTACATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 2 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GGAAGAAAAACTTCCATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGGTGACTGGTTGTaGGATGGAACAGGGGACACT +
Preference number: 2 (lower is better)
Translates to: GRKTSMFFRTSTGGLVIIGGDWL*DGTGDT
Trigger: AGTGTCCCCTGTTCCATCTCACAACCAGTCACCTCC...TATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATGGAAGTTTTTCTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCAGATACACCCTGAGATaGATCAGAGATAAAAATCTC +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGRYTLR*IRDKNL
Trigger: GAGATTTTTATCTCTGATTCATCTCAGGGTGTATCT...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGCAAGAGCCTGCATATaGGCCAGTTCTTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFARACI*ASSFCF
Trigger: GAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTTTCTCTTTGAAGCTCTaGTTCCACACTAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILFSLKL*FHTSKL
Trigger: CAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAA...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCTATGGTTTCCTTGGCTaGAGTTACAGGATCCAAGGC +
Preference number: 2 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAYGFLG*SYRIQG
Trigger: GCCTTGGATCCTGTAACTTCAGCCAAGGAAACCATA...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR TCA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCGCCTGCTTTGTTTCTTaGGCGGTTCTTAAATCCAGA +
Preference number: 2 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTACFVS*AVLKSR
Trigger: TCTGGATTTAAGAACCGCTCAAGAAACAAAGCAGGC...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR GCA 90 bp CCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: PRDYTHPFSSKYPFLLSGVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...GCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAAGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAACCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTCTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTG +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKSTVTG*WLISVL
Trigger: CAGTACAGAAATCAACCAGCACCCAGTCACAGTCGA...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAAGTCATAATAGGAGCTaGACTTCCAAAGAATGGATA +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKSHNRS*TSKEWI
Trigger: TATCCATTCTTTGGAAGTGCAGCTCCTATTATGACT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGAGTTGCAAAATCAAATaGACAGTAAGACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: FKSGKFFQSSSPLLLVMQSCKIK*TVRLGK
Trigger: CTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACT...CTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTACACTAGCAAGCTGCTaGTCTCGCTTCTCCAAGTCA +
Preference number: 2 (lower is better)
Translates to: SLWNPGIVFALVALTCSITLASC*SRFSKS
Trigger: TGACTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGT...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: TGHCINPMSESRALLKTITQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCAGTACAGTATTCTGCTaGTCCAATCTGATGGTAGCC +
Preference number: 2 (lower is better)
Translates to: HLQSLWNPGIVFALVALTSTVFC*SNLMVA
Trigger: GGCTACCATCAGATTGGACCAGCAGAATACTGTACT...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTATTAACTGTTCCAACTaGGTAGCAAATGCTATGGTC +
Preference number: 2 (lower is better)
Translates to: LYSNVSRGSVWISEGQGAINCSN*VANAMV
Trigger: GACCATAGCATTTGCTACCCAGTTGGAACAGTTAAT...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAAGATGTTAGAAAGCTaGATTCTCGCAATTCCCAGA +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVKMLES*ILAIPR
Trigger: TCTGGGAATTGCGAGAATCCAGCTTTCTAACATCTT...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATTCACGAGGCTCTGTCTaGATCTCTGAAGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANSRGSV*ISEGQG
Trigger: ACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGA...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGGGTTTGTTGTTTTGCTaGTCCTTGAACTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQAGLLFC*SLNCWN
Trigger: GTTCCAACAGTTCAAGGACCAGCAAAACAACAAACC...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGTTTGTTGTTTTGCTaGTCCTTGAACTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGGLLFC*SLNCWN
Trigger: GTTCCAACAGTTCAAGGACCAGCAAAACAACAAACC...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAACACTTGCAATCTCTGTaGAATCCTGGTATTGTTTTT +
Preference number: 2 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKHLQSL*NPGIVF
Trigger: AAAAACAATACCAGGATTCCACAGAGATTGCAAGTG...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGTCTGGCTGGTCAGTGTaGTCCACAGGATCAGTAGCC +
Preference number: 2 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWSGWSV*STGSVA
Trigger: GGCTACTGATCCTGTGGACCACACTGACCAGCCAGA...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CCA 90 bp CCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCCAACTGGTACCATTTTaGTGCCTGCTTTGTTTCTTG +
Preference number: 2 (lower is better)
Translates to: PRDYTHPFSSKYPFLLSGQLVPF*CLLCFL
Trigger: CAAGAAACAAAGCAGGCACCAAAATGGTACCAGTTG...GCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CAA 90 bp CTGCTACGGATGCGAACTGATGCTCTCTCTGGCTCAAAGTTTGGGTaGATTAAATCATTGAAGGGTTCATTTGTAACATCATTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: LLRMRTDALSGSKFG*IKSLKGSFVTSFPS
Trigger: ACTGGGAAATGATGTTACAAATGAACCCTTCAATGATTTAATCAACCCAAACTTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAGTGGCTTCTCTGCACTaGTCTTGCTTTGTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQVASLH*SCFVFK
Trigger: TTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCAC...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATTGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCTGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTTGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTATATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATAGAACTGGAAATTACCGCAGTCATTTCTCCTACAACAAACTTAGTTAAAAGCGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: IELEITAVISPTTNLVKSATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...GCTTTTAACTAAGTTTGTTGTAGGAGAAATGACTGCGGTAATTTCCAGTTCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GTCATAATAGGAGCTGCACTTCCAAAGAATGGATATGAGTACCTTAATATACAGTTCTGTACTTCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: VIIGAALPKNGYEYLNIQFCTSK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGAAGTACAGAA...CTGTATATTAAGGTACTCATATCCATTCTTTGGAAGTGCAGCTCCTATTATGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATTTTATCCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTTCTGTACTTCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 2 (lower is better)
Translates to: ILSLCHSSTSNGILKKVSFCTSK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGAAGTACAGAA...AGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGGATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTACGGCAGATACACCCTaGGATGAATCAGAGATAAAA +
Preference number: 2 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASTADTP*DESEIK
Trigger: TTTTATCTCTGATTCATCTCAGGGTGTATCTGCCGT...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTGCAAGAGCCTGCATATaGGCCAGTTCTTTCTGCTTC +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVARACI*ASSFCF
Trigger: GAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGC...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTTCTCTTTGAAGCTCTaGTTCCACACTAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKFSLKL*FHTSKL
Trigger: CAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAA...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTTAAGACGAGCCATTTaGCTTTCTTGCTCCCTCTGT +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKLRRAI*LSCSLC
Trigger: ACAGAGGGAGCAAGAAAGTCAAATGGCTCGTCTTAA...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATTTGCCAAAATCTCTCTaGTCTGTCGGTCGAGTTCAC +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANLPKSL*SVGRVH
Trigger: GTGAACTCGACCGACAGATCAGAGAGATTTTGGCAA...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATCTTTTGTTGGAGGTaGCTGGGAGTCTATGCCTTC +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANIFCWR*LGVYAF
Trigger: GAAGGCATAGACTCCCAGTCACCTCCAACAAAAGAT...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674620.1
3UTR-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACGCAGCGTTTTTAAAGTaGAAGATATACTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHAAFLK*KIYSFG
Trigger: GCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGC...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: TGHCINPMSESRALLKTIVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTACCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TGTTGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGCTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: CCLNLFNSFLISNNSCRSLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...CGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCGAAGAATTTCTACACTaGTACGGATGCGAACTGATG +
Preference number: 2 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTEEFLH*YGCELM
Trigger: CATCAGTTCGCATCCGTAGCAGTGTAGAAATTCTTC...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGCACTTCACTTTCTGTTaGATCATCTTTTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQAHFTFC*IIFCWR
Trigger: CCTCCAACAAAAGATGATGCAACAGAAAGTGAAGTG...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGAGTCATAATAGGAGCTaGACTTCCAAAGAATGGATA +
Preference number: 2 (lower is better)
Translates to: LLCILTFHEALSGSLKDKSHNRS*TSKEWI
Trigger: TATCCATTCTTTGGAAGTGCAGCTCCTATTATGACT...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGAGTTGCAAAATCAAATaGACAGTAAGACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGSCKIK*TVRLGK
Trigger: CTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACT...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCAGTTGCAAAATCAAATaGACAGTAAGACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTSCKIK*TVRLGK
Trigger: CTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACT...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATTCTGGTTTGTTGTTTTaGTGGTCCTTGAACTGTTGG +
Preference number: 2 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYSGLLF*WSLNCW
Trigger: CCAACAGTTCAAGGACCAGCAAAACAACAAACCAGA...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSTQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: QSQATHNAIESKQSQHFTTQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAAGTACAGTATTCTGCTaGTCCAATCTGATGGTAGCC +
Preference number: 2 (lower is better)
Translates to: SCGFSALILLCFQTCHLQSTVFC*SNLMVA
Trigger: GGCTACCATCAGATTGGACCAGCAGAATACTGTACT...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAGTACAGTATTCTGCTaGTCCAATCTGATGGTAGCC +
Preference number: 2 (lower is better)
Translates to: FPLAISVESWYCFCSCCLSTVFC*SNLMVA
Trigger: GGCTACCATCAGATTGGACCAGCAGAATACTGTACT...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATCTGTTTGGCTCTGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANLFGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAG...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTCTTTTGGATTTGGTTTaGTGTCCTTATCATACTGTA +
Preference number: 2 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSALLDLV*CPYHTV
Trigger: TACAGTATGATAAGGACACCAAACCAAATCCAAAAG...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCAGAAGAACTGGCTTTTaGATTTGGTTTGGTGTCCTT +
Preference number: 2 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTRRTGF*IWFGVL
Trigger: AAGGACACCAAACCAAATCCAAAAGCCAGTTCTTCT...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACA +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNDVVTS*ASEAGT
Trigger: TGTACCTGCTTCACTGGCCCAGCTAGTGACTACATC...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTTCACGAGGCTCTGTCTaGATCTCTGAAGGACAAGGT +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVSRGSV*ISEGQG
Trigger: ACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGA...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACGGTTTGTTGTTTTGCTaGTCCTTGAACTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: LSDLSVEFTYYSILVIIHGLLFC*SLNCWN
Trigger: GTTCCAACAGTTCAAGGACCAGCAAAACAACAAACC...GTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CAGCTGATGAGGCATAGTTGCAAAATCAAATGCACAGTAAGACTGGGGAAGAAATCCAAGGCAAAACATTaGAGTTTGATAGGAGTACGC +
Preference number: 2 (lower is better)
Translates to: QLMRHSCKIKCTVRLGKKSKAKH*SLIGVR
Trigger: GCGTACTCCTATCAAACTCCAATGTTTTGCCTTGGA...TTTCTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACTATGCCTCATCAGCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR TCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTGTGGCTTCTCTGCACTaGTCTTGCTTTGTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSVASLH*SCFVFK
Trigger: TTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCAC...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTTGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCTATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: PRDYTHPFSSKYPFLLSGYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...GCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATATTCTCTTTGAAGCTCTaGTTCCACACTAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIIFSLKL*FHTSKL
Trigger: CAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAA...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: HLLFDPRDYTHPFSSKYPVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...GGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: LLFDPRDYTHPFSSKYPFGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...AAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQAPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: PRDYTHPFSSKYPFLLSGPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...GCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAGTCAGTACAGTATTCTaGTGGTCCAATCTGATGGTA +
Preference number: 2 (lower is better)
Translates to: SCGFSALILLCFQTCHLQVSTVF*WSNLMV
Trigger: TACCATCAGATTGGACCAGCAGAATACTGTACTGAC...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ATAGAACTGGAAATTACCGCAGTCATTTCTCCTACAACAAACTTAGTTAAAAGCCTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 2 (lower is better)
Translates to: IELEITAVISPTTNLVKSLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...GCTTTTAACTAAGTTTGTTGTAGGAGAAATGACTGCGGTAATTTCCAGTTCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCACTTCACTTTCTGTTaGATCATCTTTTGTTGGAGG +
Preference number: 2 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTHFTFC*IIFCWR
Trigger: CCTCCAACAAAAGATGATGCAACAGAAAGTGAAGTG...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCCTTAGTCATAATAGGAGCTaGACTTCCAAAGAATGGATA +
Preference number: 2 (lower is better)
Translates to: SQIIIQTFFQYTAMGAILSHNRS*TSKEWI
Trigger: TATCCATTCTTTGGAAGTGCAGCTCCTATTATGACT...AAGGATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACAGTTGCAAAATCAAATaGACAGTAAGACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: LSDLSVEFTYYSILVIIHSCKIK*TVRLGK
Trigger: CTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACT...GTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCTCTGGTTTGTTGTTTTaGTGGTCCTTGAACTGTTGG +
Preference number: 2 (lower is better)
Translates to: FFYQASQIIIQTFFQYTASGLLF*WSLNCW
Trigger: CCAACAGTTCAAGGACCAGCAAAACAACAAACCAGA...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCAAAGAATGGATATCTGGTACCATTTTGGTaGCTGCTTTGTTTCTTGAGC +
Preference number: 2 (lower is better)
Translates to: TSTGGLVIIGAALPKNGYLVPFW*LLCFLS
Trigger: GCTCAAGAAACAAAGCAGGCACCAAAATGGTACCAG...ATATCCATTCTTTGGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGAATTTACATTCAAATaGAATAGGACGCAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVEFTFK*NRTQRF
Trigger: AAAACGCTGCGTCCTATTCCATTTGAATGTAAATTC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCAAAGAATGGATATACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: TSTGGLVIIGAALPKNGYTQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...ATATCCATTCTTTGGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATAACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIITQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCATTAACTGTTCCAACTaGGTAGCAAATGCTATGGTC +
Preference number: 2 (lower is better)
Translates to: HVFPNFYRRISHNRSCTSINCSN*VANAMV
Trigger: GACCATAGCATTTGCTACCCAGTTGGAACAGTTAAT...GGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCATTTCACCTTCGACTGTGACTaGGTGCTGGTTGATTTCTGT +
Preference number: 2 (lower is better)
Translates to: WNPGIVFALVALTCSIHFTFDCD*VLVDFC
Trigger: ACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGT...GAAATGAATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTGTTTGGCTCTGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: LLFDPRDYTHPFSSKYPFLFGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAG...AAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTCTGTTTGGCTCTGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVLFGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAG...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTGTGTCTTCTCCTTTATaGGGGTTAAAACTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLVSSPL*GLKLSS
Trigger: AGAAGAAAGTTTTAACCCCCATAAAGGAGAAGACAC...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACCTTTTGGATTTGGTTTaGTGTCCTTATCATACTGTA +
Preference number: 2 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHLLDLV*CPYHTV
Trigger: TACAGTATGATAAGGACACCAAACCAAATCCAAAAG...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCTACTGGCTTTTGGATTTaGTTTGGTGTCCTTATCATA +
Preference number: 2 (lower is better)
Translates to: PCAIVQPVMESLRRCLAATGFWI*FGVLII
Trigger: TATGATAAGGACACCAAACCAAATCCAAAAGCCAGT...AGCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCCAGGTACAGAAGAACTaGCTTTTGGATTTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAQVQKN*LLDLVW
Trigger: CCAAACCAAATCCAAAAGCCAGTTCTTCTGTACCTG...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAGGTTTGTTGTTTTGCTaGTCCTTGAACTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: FHLQSLWNPGIVFALVALGLLFC*SLNCWN
Trigger: GTTCCAACAGTTCAAGGACCAGCAAAACAACAAACC...TAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAATTATTACTCAGCAACTaGTACCATTTTGGTGCCTGC +
Preference number: 2 (lower is better)
Translates to: SCGFSALILLCFQTCHLQLLLSN*YHFGAC
Trigger: GCAGGCACCAAAATGGTACCAGTTGCTGAGTAATAA...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATGTGGCTTCTCTGCACTaGTCTTGCTTTGTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANVASLH*SCFVFK
Trigger: TTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCAC...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: HLQSLWNPGIVFALVALTAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCATGGGAAACGTTGCTTTaGGGACAAATGTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPWETLL*GQMLAL
Trigger: CAGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCA...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAATATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAATGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTAAATGCTATGGTCACTaGCATAATAAAGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASKCYGH*HNKGVS
Trigger: ACTGACTCCTTTATTATGTCAGTGACCATAGCATTT...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CAGCTGATGAGGCATAGTTGCAAAATCAAATGCACAGTAAGACTGGGGAAGAAAAAATGCTATGGTCACTaGCATAATAAAGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: QLMRHSCKIKCTVRLGKKKCYGH*HNKGVS
Trigger: ACTGACTCCTTTATTATGTCAGTGACCATAGCATTT...TTTCTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACTATGCCTCATCAGCTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCATTTCATCTTTTGTTGGAGGTaGCTGGTTGTGAGATGGAAC +
Preference number: 2 (lower is better)
Translates to: WNPGIVFALVALTCSIHFIFCWR*LVVRWN
Trigger: GTTCCATCTCACAACCAGTCACCTCCAACAAAAGAT...GAAATGAATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCAGATACACCCTGAGATaGATCAGAGATAAAAATCTC +
Preference number: 2 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTRYTLR*IRDKNL
Trigger: GAGATTTTTATCTCTGATTCATCTCAGGGTGTATCT...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATAGATACACCCTGAGATaGATCAGAGATAAAAATCTC +
Preference number: 2 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYRYTLR*IRDKNL
Trigger: GAGATTTTTATCTCTGATTCATCTCAGGGTGTATCT...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAAGATACACCCTGAGATaGATCAGAGATAAAAATCTC +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQRYTLR*IRDKNL
Trigger: GAGATTTTTATCTCTGATTCATCTCAGGGTGTATCT...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATAACGGCAGATACACCCTaGGATGAATCAGAGATAAAA +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIITADTP*DESEIK
Trigger: TTTTATCTCTGATTCATCTCAGGGTGTATCTGCCGT...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAATTCTCTTTGAAGCTCTaGTTCCACACTAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: ELLRVFIQTGHCINPMSEFSLKL*FHTSKL
Trigger: CAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAA...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTTTCTCTTTGAAGCTCTaGTTCCACACTAGCAAGCTG +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVFSLKL*FHTSKL
Trigger: CAGCTTGCTAGTGTGGAATCAGAGCTTCAAAGAGAA...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTTCTAGTTCTACTTGGTaGATACAGTCCTCTTTGGCC +
Preference number: 2 (lower is better)
Translates to: LLFDPRDYTHPFSSKYPFSSSTW*IQSSLA
Trigger: GGCCAAAGAGGACTGTATTCACCAAGTAGAACTAGA...AAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACTCTAGTTCTACTTGGTaGATACAGTCCTCTTTGGCC +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNSSSTW*IQSSLA
Trigger: GGCCAAAGAGGACTGTATTCACCAAGTAGAACTAGA...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCAGTTGCAAAATCAAATaGACAGTAAGACTGGGGAAG +
Preference number: 2 (lower is better)
Translates to: QSQATHNAIESKQSQHFTSCKIK*TVRLGK
Trigger: CTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACT...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGCAGTTTAGACTTAGTTaGAGATTCCAACTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGQFRLS*RFQLSF
Trigger: GAAAGAAAGTTGGAATCTGCAACTAAGTCTAAACTG...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATTACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: WLLCTDLALFSNLSLANITQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...AATATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACAGTACAGTATTCTGCTaGTCCAATCTGATGGTAGCC +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNSTVFC*SNLMVA
Trigger: GGCTACCATCAGATTGGACCAGCAGAATACTGTACT...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTTTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCATTAACTGTTCCAACTaGGTAGCAAATGCTATGGTC +
Preference number: 2 (lower is better)
Translates to: FFHLQSLWNPGIVFALVAINCSN*VANAMV
Trigger: GACCATAGCATTTGCTACCCAGTTGGAACAGTTAAT...GGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCAATTCAATTAAAGACTaGGAGTCTATGCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTNSIKD*ESMPSL
Trigger: GAGAGAAGGCATAGACTCCCAGTCTTTAATTGAATT...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATAATTCAATTAAAGACTaGGAGTCTATGCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYNSIKD*ESMPSL
Trigger: GAGAGAAGGCATAGACTCCCAGTCTTTAATTGAATT...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAAATTCAATTAAAGACTaGGAGTCTATGCCTTCTCTC +
Preference number: 2 (lower is better)
Translates to: FISLNQRPPLAFESSHRQNSIKD*ESMPSL
Trigger: GAGAGAAGGCATAGACTCCCAGTCTTTAATTGAATT...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGAGAAGAACTGGCTTTTaGATTTGGTTTGGTGTCCTT +
Preference number: 2 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKRRTGF*IWFGVL
Trigger: AAGGACACCAAACCAAATCCAAAAGCCAGTTCTTCT...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAAAAGATGTTAGAAAGCTaGATTCTCGCAATTCCCAGA +
Preference number: 2 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKKMLES*ILAIPR
Trigger: TCTGGGAATTGCGAGAATCCAGCTTTCTAACATCTT...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATAGGTTTGTTGTTTTGCTaGTCCTTGAACTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIIGLLFC*SLNCWN
Trigger: GTTCCAACAGTTCAAGGACCAGCAAAACAACAAACC...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCCAAACTGTCTTCTTTaGCTGTTTAAGTCTGGCAAG +
Preference number: 2 (lower is better)
Translates to: SLWNPGIVFALVALTCSIPNCLL*LFKSGK
Trigger: CTTGCCAGACTTAAACAGCCAAAGAAGACAGTTTGG...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513565.6
3UTR-3UTR TCA 90 bp TGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATTGTGGCTTCTCTGCACTaGTCTTGCTTTGTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: WLLCTDLALFSNLSLANIVASLH*SCFVFK
Trigger: TTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCAC...AATATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: QSQATHNAIESKQSQHFTAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: FFYQASQIIIQTFFQYTACKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATCTTTTGTTGGAGGTaGCTGGTTGTGAGATGGAAC +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPIFCWR*LVVRWN
Trigger: GTTCCATCTCACAACCAGTCACCTCCAACAAAAGAT...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCGCAGCGTTTTTAAAGTaGAAGATATACTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: QSQATHNAIESKQSQHFTAAFLK*KIYSFG
Trigger: GCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGC...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAGCAGCGTTTTTAAAGTaGAAGATATACTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: PFSSKYPFLLSGESNNHPAAFLK*KIYSFG
Trigger: GCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGC...TGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATTGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: WLLCTDLALFSNLSLANIVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...AATATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTT +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNVMWLL*TDLALF
Trigger: AAACAAAGCAAGATCAGTGCAGAGAAGCCACATGAC...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATAATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIIIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: QSQATHNAIESKQSQHFTPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GTCCATAATCTTCTAGAGTCACTGTGTAAGAAAGATCTGCTATCCTGTTATTTGGTCAGTACAGTATTCTaGTGGTCCAATCTGATGGTA +
Preference number: 2 (lower is better)
Translates to: VHNLLESLCKKDLLSCYLVSTVF*WSNLMV
Trigger: TACCATCAGATTGGACCAGCAGAATACTGTACTGAC...CAAATAACAGGATAGCAGATCTTTCTTACACAGTGACTCTAGAAGATTATGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GTCCATAATCTTCTAGAGTCACTGTGTAAGAAAGATCTGCTATCCTGTTATTTGGAAGAATTTCTACACTaGTACGGATGCGAACTGATG +
Preference number: 2 (lower is better)
Translates to: VHNLLESLCKKDLLSCYLEEFLH*YGCELM
Trigger: CATCAGTTCGCATCCGTAGCAGTGTAGAAATTCTTC...CAAATAACAGGATAGCAGATCTTTCTTACACAGTGACTCTAGAAGATTATGGAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TGTTGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGAAGAATTTCTACACTaGTACGGATGCGAACTGATG +
Preference number: 2 (lower is better)
Translates to: CCLNLFNSFLISNNSCRSEEFLH*YGCELM
Trigger: CATCAGTTCGCATCCGTAGCAGTGTAGAAATTCTTC...CGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACGAAGAATTTCTACACTaGTACGGATGCGAACTGATG +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNEEFLH*YGCELM
Trigger: CATCAGTTCGCATCCGTAGCAGTGTAGAAATTCTTC...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAGTCATAATAGGAGCTaGACTTCCAAAGAATGGATA +
Preference number: 2 (lower is better)
Translates to: FPLAISVESWYCFCSCCLSHNRS*TSKEWI
Trigger: TATCCATTCTTTGGAAGTGCAGCTCCTATTATGACT...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTTCTGGTTTGTTGTTTTaGTGGTCCTTGAACTGTTGG +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVSGLLF*WSLNCW
Trigger: CCAACAGTTCAAGGACCAGCAAAACAACAAACCAGA...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCCAGTTTAGACTTAGTTaGAGATTCCAACTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: HLQSLWNPGIVFALVALTQFRLS*RFQLSF
Trigger: GAAAGAAAGTTGGAATCTGCAACTAAGTCTAAACTG...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATATCCTGGTATTGTTTTTaGTCTTGTTGCCTTAACCTG +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIISWYCF*SCCLNL
Trigger: CAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGA...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GGAAGAAAAACTTCCATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: GRKTSMFFRTSTGGLVIITQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...TATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATGGAAGTTTTTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGACCCAACATGTCATGTaGCTTCTCTGCACTGATCTT +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMTQHVM*LLCTDL
Trigger: AAGATCAGTGCAGAGAAGCCACATGACATGTTGGGT...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCGTGTCTTCTCCTTTATaGGGGTTAAAACTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: QSQATHNAIESKQSQHFTVSSPL*GLKLSS
Trigger: AGAAGAAAGTTTTAACCCCCATAAAGGAGAAGACAC...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATCTTTTGGATTTGGTTTaGTGTCCTTATCATACTGTA +
Preference number: 2 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYLLDLV*CPYHTV
Trigger: TACAGTATGATAAGGACACCAAACCAAATCCAAAAG...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCTTTTGGATTTGGTTTaGTGTCCTTATCATACTGTA +
Preference number: 2 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASLLDLV*CPYHTV
Trigger: TACAGTATGATAAGGACACCAAACCAAATCCAAAAG...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCACTGGCTTTTGGATTTaGTTTGGTGTCCTTATCATA +
Preference number: 2 (lower is better)
Translates to: FFYQASQIIIQTFFQYTATGFWI*FGVLII
Trigger: TATGATAAGGACACCAAACCAAATCCAAAAGCCAGT...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTTTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCACTGGCTTTTGGATTTaGTTTGGTGTCCTTATCATA +
Preference number: 2 (lower is better)
Translates to: FFHLQSLWNPGIVFALVATGFWI*FGVLII
Trigger: TATGATAAGGACACCAAACCAAATCCAAAAGCCAGT...GGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTAAGATGTTAGAAAGCTaGATTCTCGCAATTCCCAGA +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFKMLES*ILAIPR
Trigger: TCTGGGAATTGCGAGAATCCAGCTTTCTAACATCTT...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGTTGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGGTTTGTTGTTTTGCTaGTCCTTGAACTGTTGGAAC +
Preference number: 2 (lower is better)
Translates to: CCLNLFNSFLISNNSCRSGLLFC*SLNCWN
Trigger: GTTCCAACAGTTCAAGGACCAGCAAAACAACAAACC...CGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAAAAAGCTATCCACTGGTaGCTTTGTATCGGTTTCCAA +
Preference number: 2 (lower is better)
Translates to: ELLRVFIQTGHCINPMSEKAIHW*LCIGFQ
Trigger: TTGGAAACCGATACAAAGCCACCAGTGGATAGCTTT...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCTTTAAAGCTATCCACTaGTGGCTTTGTATCGGTTTC +
Preference number: 2 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLFKAIH*WLCIGF
Trigger: GAAACCGATACAAAGCCACCAGTGGATAGCTTTAAA...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CAA 90 bp CATGTATACTCCTTAAGTCTATTGAAAAGCAAAAATGATGTGATGTaGCTGGTACAGCAATCTTCTGTCCTGAAGCTACTTCTGAAGCAT +
Preference number: 2 (lower is better)
Translates to: HVYSLSLLKSKNDVM*LVQQSSVLKLLLKH
Trigger: ATGCTTCAGAAGTAGCTTCAGGACAGAAGATTGCTGTACCAGCAACATCACATCATTTTTGCTTTTCAATAGACTTAAGGAGTATACATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAACATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: ELLRVFIQTGHCINPMSEHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATTATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: SHQSIPFFYQASQIIIQTCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...GGTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATATGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIICKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATAAAATGCTATGGTCACTaGCATAATAAAGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: NLSDLSVEFTYYSILVIIKCYGH*HNKGVS
Trigger: ACTGACTCCTTTATTATGTCAGTGACCATAGCATTT...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTAGATACACCCTGAGATaGATCAGAGATAAAAATCTC +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFRYTLR*IRDKNL
Trigger: GAGATTTTTATCTCTGATTCATCTCAGGGTGTATCT...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGCAGCGTTTTTAAAGTaGAAGATATACTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: KQSQATHNAIESKQSQHFAAFLK*KIYSFG
Trigger: GCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GTCCATAATCTTCTAGAGTCACTGTGTAAGAAAGATCTGCTATCCTGTTATTTGATACAGACAGGGCACTaGATAAATCCAATGAGTGAA +
Preference number: 2 (lower is better)
Translates to: VHNLLESLCKKDLLSCYLIQTGH*INPMSE
Trigger: TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTAT...CAAATAACAGGATAGCAGATCTTTCTTACACAGTGACTCTAGAAGATTATGGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATTATTAACTGTTCCAACTaGGTAGCAAATGCTATGGTC +
Preference number: 2 (lower is better)
Translates to: WLLCTDLALFSNLSLANIINCSN*VANAMV
Trigger: GACCATAGCATTTGCTACCCAGTTGGAACAGTTAAT...AATATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCGTGTCTTCTCCTTTATaGGGGTTAAAACTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: SHQSIPFFYQASQIIIQTVSSPL*GLKLSS
Trigger: AGAAGAAAGTTTTAACCCCCATAAAGGAGAAGACAC...GGTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCACAGGTACAGAAGAACTaGCTTTTGGATTTGGTTTGG +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPQVQKN*LLDLVW
Trigger: CCAAACCAAATCCAAAAGCCAGTTCTTCTGTACCTG...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCATCTCTGTGGAATCCTaGTATTGTTTTTGCTCTTGT +
Preference number: 2 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLISVES*YCFCSC
Trigger: ACAAGAGCAAAAACAATACCAGGATTCCACAGAGAT...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCACTTGCAATCTCTGTaGAATCCTGGTATTGTTTTT +
Preference number: 2 (lower is better)
Translates to: SLWNPGIVFALVALTCSIHLQSL*NPGIVF
Trigger: AAAAACAATACCAGGATTCCACAGAGATTGCAAGTG...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTGAACGATGTAACCTATaGTTTCCTTGGCTGAAGTTA +
Preference number: 2 (lower is better)
Translates to: LLFDPRDYTHPFSSKYPFERCNL*FPWLKL
Trigger: TAACTTCAGCCAAGGAAACCATAGGTTACATCGTTC...AAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CAA 90 bp GGCTTTGTATCGGTTTCCAAAGCAATACTTATCTGTATCTCAGACTaGAATTTGGTGTATTTATTACTCAGCAACTGGTACCATTTTGGT +
Preference number: 2 (lower is better)
Translates to: GFVSVSKAILICISD*NLVYLLLSNWYHFG
Trigger: ACCAAAATGGTACCAGTTGCTGAGTAATAAATACACCAAATTCAAGTCTGAGATACAGATAAGTATTGCTTTGGAAACCGATACAAAGCC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR TCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGCATAAATCCAATGAGTaGATCTCGTGCGCTTTTGAA +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMHKSNE*ISCAFE
Trigger: TTCAAAAGCGCACGAGATTCACTCATTGGATTTATG...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACTATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTAGTCATAATAGGAGCTaGACTTCCAAAGAATGGATA +
Preference number: 2 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVSHNRS*TSKEWI
Trigger: TATCCATTCTTTGGAAGTGCAGCTCCTATTATGACT...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATGAATTTACATTCAAATaGAATAGGACGCAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: MWLLCTDLALFSNLSLANEFTFK*NRTQRF
Trigger: AAAACGCTGCGTCCTATTCCATTTGAATGTAAATTC...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp TGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCATTTCACTGGCTTTTGGATTTaGTTTGGTGTCCTTATCATA +
Preference number: 2 (lower is better)
Translates to: WNPGIVFALVALTCSIHFTGFWI*FGVLII
Trigger: TATGATAAGGACACCAAACCAAATCCAAAAGCCAGT...GAAATGAATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAAGAAGAACTGGCTTTTaGATTTGGTTTGGTGTCCTT +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPRRTGF*IWFGVL
Trigger: AAGGACACCAAACCAAATCCAAAAGCCAGTTCTTCT...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGGCTTTTGAAAACGATTaGTTGAAATTAGCGGGAGTA +
Preference number: 2 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWAFEND*LKLAGV
Trigger: TACTCCCGCTAATTTCAATCAATCGTTTTCAAAAGC...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGTATCCTACTCTGCTTTaGTGGAAGTTATTGGTAACT +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMYPTLL*WKLLVT
Trigger: AGTTACCAATAACTTCCATCAAAGCAGAGTAGGATA...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR TCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAAATGCTATGGTCACTaGCATAATAAAGGAGTCAGT +
Preference number: 2 (lower is better)
Translates to: IKELLRVFIQTGHCINPMKCYGH*HNKGVS
Trigger: ACTGACTCCTTTATTATGTCAGTGACCATAGCATTT...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAGCAGCGTTTTTAAAGTaGAAGATATACTCTTTTGGC +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPAAFLK*KIYSFG
Trigger: GCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGC...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGCCATATATCCTACTCTaGTTTGATGGAAGTTATTGG +
Preference number: 2 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWPYILL*FDGSYW
Trigger: CCAATAACTTCCATCAAAGCAGAGTAGGATATATGG...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR GCA 90 bp TTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCAGTTTAGACTTAGTTaGAGATTCCAACTTTCTTTC +
Preference number: 2 (lower is better)
Translates to: LLFDPRDYTHPFSSKYPFQFRLS*RFQLSF
Trigger: GAAAGAAAGTTGGAATCTGCAACTAAGTCTAAACTG...AAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GTCCATAATCTTCTAGAGTCACTGTGTAAGAAAGATCTGCTATCCTGTTATTTGGAATTTACATTCAAATaGAATAGGACGCAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: VHNLLESLCKKDLLSCYLEFTFK*NRTQRF
Trigger: AAAACGCTGCGTCCTATTCCATTTGAATGTAAATTC...CAAATAACAGGATAGCAGATCTTTCTTACACAGTGACTCTAGAAGATTATGGAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAAGAATTTACATTCAAATaGAATAGGACGCAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: ELLRVFIQTGHCINPMSEEFTFK*NRTQRF
Trigger: AAAACGCTGCGTCCTATTCCATTTGAATGTAAATTC...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAGTGTCTTCTCCTTTATaGGGGTTAAAACTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: DIKELLRVFIQTGHCINPVSSPL*GLKLSS
Trigger: AGAAGAAAGTTTTAACCCCCATAAAGGAGAAGACAC...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGCACTTGCAATCTCTGTaGAATCCTGGTATTGTTTTT +
Preference number: 2 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWHLQSL*NPGIVF
Trigger: AAAAACAATACCAGGATTCCACAGAGATTGCAAGTG...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGGAATTTACATTCAAATaGAATAGGACGCAGCGTTTT +
Preference number: 2 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWEFTFK*NRTQRF
Trigger: AAAACGCTGCGTCCTATTCCATTTGAATGTAAATTC...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR GCA 72 bp TTTGTTGGAGGTGACTGGGAGTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCCACAGTTGGGGCTAGC +
Preference number: 3 (lower is better)
Translates to: FVGGDWESMPSL*RATDTPTVGAS
Trigger: GCTAGCCCCAACTGTGGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGACTCCCAGTCACCTCCAACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000674620.1
3UTR CCA 72 bp CAGCCACAATGTCCCTGGGGTCAAGTCCAGCCAGGATaGCAGGTACTAGCACCTAGATCTTGGCTTCTAAAA +
Preference number: 3 (lower is better)
Translates to: QPQCPWGQVQPG*QVLAPRSWLLK
Trigger: TTTTAGAAGCCAAGATCTAGGTGCTAGTACCTGCCATCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508138.5
3UTR-3UTR CAA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCAGAGTCCTGCAGTTCTaGCAGGTTCCGCTGACGTTC +
Preference number: 3 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGRVLQF*QVPLTF
Trigger: GAACGTCAGCGGAACCTGCAAGAACTGCAGGACTCT...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR GCA 72 bp AATTCAATTAAAGACTGGGAGTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCCACAGTTGGGGCTAGC +
Preference number: 3 (lower is better)
Translates to: NSIKDWESMPSL*RATDTPTVGAS
Trigger: GCTAGCCCCAACTGTGGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGACTCCCAGTCTTTAATTGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTAGAGTCCTGCAGTTCTaGCAGGTTCCGCTGACGTTC +
Preference number: 3 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLRVLQF*QVPLTF
Trigger: GAACGTCAGCGGAACCTGCAAGAACTGCAGGACTCT...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TGCTGGTCCAATCTGATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCGCAAAACATTGGAGTTaGATAGGAGTACGCTGTAGC +
Preference number: 3 (lower is better)
Translates to: CWSNLMVASLFIQHSHNVAKHWS*IGVRCS
Trigger: GCTACAGCGTACTCCTATCAAACTCCAATGTTTTGC...GACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CCA 72 bp TGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTaGGTGCTGGTTGATTTCTGTACTGCCCTTTTTAAG +
Preference number: 3 (lower is better)
Translates to: WRVKGKSTFDCD*VLVDFCTALFK
Trigger: CTTAAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTGTGACTGGGTGCTGGTaGATTTCTGTACTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: LYSNVSRGSVWISEGQGAVTGCW*ISVLPF
Trigger: AAAGGGCAGTACAGAAATCAACCAGCACCCAGTCAC...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGTGACTGGGTGCTGGTaGATTTCTGTACTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVVTGCW*ISVLPF
Trigger: AAAGGGCAGTACAGAAATCAACCAGCACCCAGTCAC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGACTGGGTGCTGGTaGATTTCTGTACTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: LLCILTFHEALSGSLKDKVTGCW*ISVLPF
Trigger: AAAGGGCAGTACAGAAATCAACCAGCACCCAGTCAC...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCACAGACACTCCCACAGTaGGGGCTAGCTCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: PFSSKYPFLLSGESNNHPQTLPQ*GLAPQE
Trigger: TTCCTGTGGAGCTAGCCCCAACTGTGGGAGTGTCTG...TGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCAGAGTCCTGCAGTTCTaGCAGGTTCCGCTGACGTTC +
Preference number: 3 (lower is better)
Translates to: HLQSLWNPGIVFALVALTRVLQF*QVPLTF
Trigger: GAACGTCAGCGGAACCTGCAAGAACTGCAGGACTCT...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: FKSGKFFQSSSPLLLVMQVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...CTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCAGACACTCCCACAGTaGGGGCTAGCTCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: SLWNPGIVFALVALTCSIQTLPQ*GLAPQE
Trigger: TTCCTGTGGAGCTAGCCCCAACTGTGGGAGTGTCTG...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCAAAGAATGGATATCAGACACTCCCACAGTaGGGGCTAGCTCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: TSTGGLVIIGAALPKNGYQTLPQ*GLAPQE
Trigger: TTCCTGTGGAGCTAGCCCCAACTGTGGGAGTGTCTG...ATATCCATTCTTTGGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCTGTTGCATCATCTTTaGTTGGAGGTGACTGGTTGT +
Preference number: 3 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHLLHHL*LEVTGC
Trigger: ACAACCAGTCACCTCCAACAAAAGATGATGCAACAG...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAAGAGAAGACGGCTTTaGCTGTACGGCAGATACACC +
Preference number: 3 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCKRRRL*LYGRYT
Trigger: GGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCTT...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGTGGAATCCTGGTATaGTTTTTGCTCTTGTTGCCT +
Preference number: 3 (lower is better)
Translates to: SCSLCLSLASSFKARPHCCGILV*FLLLLP
Trigger: AGGCAACAAGAGCAAAAACAATACCAGGATTCCACA...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTTTGCATCATCTTTTGTaGGAGGTGACTGGGAGTCTA +
Preference number: 3 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSALHHLL*EVTGSL
Trigger: TAGACTCCCAGTCACCTCCAACAAAAGATGATGCAA...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000674620.1
3UTR GCA 72 bp ACTGAAGAGCCAGGTAAACACGAAGAATTTCTACACTaGTACGGATGCGAACTGATGCTCTCTCTGGCTCAA +
Preference number: 3 (lower is better)
Translates to: TEEPGKHEEFLH*YGCELMLSLAQ
Trigger: TTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAGAAATTCTTCGTGTTTACCTGGCTCTTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR CCA 72 bp TCAATTTCCCAAGCTAACTCAGTAGCAAATTCTGGCTaGTCAGTGTGGTCCACAGGATCAGTAGCCAACTGT +
Preference number: 3 (lower is better)
Translates to: SISQANSVANSG*SVWSTGSVANC
Trigger: ACAGTTGGCTACTGATCCTGTGGACCACACTGACCAGCCAGAATTTGCTACTGAGTTAGCTTGGGAAATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CCA 72 bp AGGGGGAGCCCCCTTTGCTTTAAAGCTATCCACTGGTaGCTTTGTATCGGTTTCCAAAGCAATACTTATCTG +
Preference number: 3 (lower is better)
Translates to: RGSPLCFKAIHW*LCIGFQSNTYL
Trigger: CAGATAAGTATTGCTTTGGAAACCGATACAAAGCCACCAGTGGATAGCTTTAAAGCAAAGGGGGCTCCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CCA 72 bp TCGAGGGGGAGCCCCCTTTGCTTTAAAGCTATCCACTaGTGGCTTTGTATCGGTTTCCAAAGCAATACTTAT +
Preference number: 3 (lower is better)
Translates to: SRGSPLCFKAIH*WLCIGFQSNTY
Trigger: ATAAGTATTGCTTTGGAAACCGATACAAAGCCACCAGTGGATAGCTTTAAAGCAAAGGGGGCTCCCCCTCGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CAA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGACTTTCACTGTAAGTTaGACGCCAACACTGTTCACC +
Preference number: 3 (lower is better)
Translates to: LLCILTFHEALSGSLKDKTFTVS*TPTLFT
Trigger: GGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGT...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCAAGAGAAGACGGCTTTaGCTGTACGGCAGATACACC +
Preference number: 3 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTKRRRL*LYGRYT
Trigger: GGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCTT...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCAAGAGAAGACGGCTTTaGCTGTACGGCAGATACACC +
Preference number: 3 (lower is better)
Translates to: HLQSLWNPGIVFALVALTKRRRL*LYGRYT
Trigger: GGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCTT...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR GCA 72 bp GGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTGCCCTTTTTAAGTAAT +
Preference number: 3 (lower is better)
Translates to: GSRVKAPSTVTG*WLISVLPFLSN
Trigger: ATTACTTAAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCATATCCTACTCTGCTTaGATGGAAGTTATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: SCSLCLSLASSFKARPHCISYSA*MEVIGN
Trigger: GTTACCAATAACTTCCATCAAAGCAGAGTAGGATAT...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGGCTCAAAGTTTGGGTaGATTAAATCATTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKGSKFG*IKSLKG
Trigger: ACCCTTCAATGATTTAATCAACCCAAACTTTGAGCC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAGTGACTGGGTGCTGGTaGATTTCTGTACTGCCCTTT +
Preference number: 3 (lower is better)
Translates to: FHLQSLWNPGIVFALVALVTGCW*ISVLPF
Trigger: AAAGGGCAGTACAGAAATCAACCAGCACCCAGTCAC...TAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGCAGACACTCCCACAGTaGGGGCTAGCTCCACAGGAA +
Preference number: 3 (lower is better)
Translates to: IKELLRVFIQTGHCINPMQTLPQ*GLAPQE
Trigger: TTCCTGTGGAGCTAGCCCCAACTGTGGGAGTGTCTG...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTGCTACTTCTGAAGCATaGGATGTAGTCACTAGCTGG +
Preference number: 3 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILATSEA*DVVTSW
Trigger: CCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGC...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAAAGAGAAGACGGCTTTaGCTGTACGGCAGATACACC +
Preference number: 3 (lower is better)
Translates to: FHLQSLWNPGIVFALVALKRRRL*LYGRYT
Trigger: GGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCTT...TAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCTGTTGCATCATCTTTaGTTGGAGGTGACTGGGAGT +
Preference number: 3 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTLLHHL*LEVTGS
Trigger: ACTCCCAGTCACCTCCAACAAAAGATGATGCAACAG...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674620.1
3UTR-3UTR CAA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCGCAACTGGTACCATTTaGGTGCCTGCTTTGTTTCTT +
Preference number: 3 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCATGTI*VPALFL
Trigger: AAGAAACAAAGCAGGCACCAAAATGGTACCAGTTGC...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR CCA 72 bp TCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCCTTTTTAAGTAATCCA +
Preference number: 3 (lower is better)
Translates to: SRVKAPSTVTGC*LISVLPFLSNP
Trigger: TGGATTACTTAAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR CCA 72 bp CTTGAGCGGTTCTTAAATCCAGAACGATGTAACCTATaGTTTCCTTGGCTGAAGTTACAGGATCCAAGGCAA +
Preference number: 3 (lower is better)
Translates to: LERFLNPERCNL*FPWLKLQDPRQ
Trigger: TTGCCTTGGATCCTGTAACTTCAGCCAAGGAAACCATAGGTTACATCGTTCTGGATTTAAGAACCGCTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CAA 90 bp TTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTTCAGGGCTCAAAGTTTGGGTaGATTAAATCATTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: FLPFLCKSLHMSQFFLLQGSKFG*IKSLKG
Trigger: ACCCTTCAATGATTTAATCAACCCAAACTTTGAGCC...CTGAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCTTGCATCATCTTTTGTaGGAGGTGACTGGTTGTGAG +
Preference number: 3 (lower is better)
Translates to: HVFPNFYRRISHNRSCTSLHHLL*EVTGCE
Trigger: CTCACAACCAGTCACCTCCAACAAAAGATGATGCAA...GGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCACAGAAGAACTGGCTTTaGGATTTGGTTTGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSQKNWL*DLVWCP
Trigger: AGGACACCAAACCAAATCCAAAAGCCAGTTCTTCTG...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTTTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCGCTACTTCTGAAGCATaGGATGTAGTCACTAGCTGG +
Preference number: 3 (lower is better)
Translates to: FFHLQSLWNPGIVFALVAATSEA*DVVTSW
Trigger: CCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGC...GGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTGCTACTTCTGAAGCATaGGATGTAGTCACTAGCTGG +
Preference number: 3 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSATSEA*DVVTSW
Trigger: CCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGC...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCACTTTCACTGTAAGTTaGACGCCAACACTGTTCACC +
Preference number: 3 (lower is better)
Translates to: HLQSLWNPGIVFALVALTTFTVS*TPTLFT
Trigger: GGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGT...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTAAGAGAAGACGGCTTTaGCTGTACGGCAGATACACC +
Preference number: 3 (lower is better)
Translates to: SLWNPGIVFALVALTCSIKRRRL*LYGRYT
Trigger: GGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCTT...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCAGCATCATTAAGCTGTaGCTGAAGGCGGTGTTTATC +
Preference number: 3 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTSIIKL*LKAVFI
Trigger: GATAAACACCGCCTTCAGCAACAGCTTAATGATGCT...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAGCATCATTAAGCTGTaGCTGAAGGCGGTGTTTATC +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSSIIKL*LKAVFI
Trigger: GATAAACACCGCCTTCAGCAACAGCTTAATGATGCT...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCCGGATTTCTGGTTTGTaGTTTTGCTGGTCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: HLQSLWNPGIVFALVALTRISGL*FCWSLN
Trigger: GTTCAAGGACCAGCAAAACAACAAACCAGAAATCCG...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCATATCCACTGGTGGCTTaGTATCGGTTTCCAAAGCAA +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSYPLVA*YRFPKQ
Trigger: TTGCTTTGGAAACCGATACAAAGCCACCAGTGGATA...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR GCA 72 bp GACCAATCTGTCACCCAACATGTCATGTGGCTTCTCTaGACTGATCTTGCTTTGTTTTCAAACTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: DQSVTQHVMWLL*TDLALFSNLSL
Trigger: AAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGACATGTTGGGTGACAGATTGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTATGCACTGATCTTGCTTaGTTTTCAAACTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVCTDLA*FSNLSL
Trigger: AAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCA...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGTGCACTGATCTTGCTTaGTTTTCAAACTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: LLCILTFHEALSGSLKDKCTDLA*FSNLSL
Trigger: AAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCA...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: KQSQATHNAIESKQSQHFVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SHQSIPFFYQASQIIIQTVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...GGTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACATATCCTACTCTGCTTaGATGGAAGTTATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHISYSA*MEVIGN
Trigger: GTTACCAATAACTTCCATCAAAGCAGAGTAGGATAT...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTTTGCATCATCTTTTGTaGGAGGTGACTGGTTGTGAG +
Preference number: 3 (lower is better)
Translates to: FPLAISVESWYCFCSCCLLHHLL*EVTGCE
Trigger: CTCACAACCAGTCACCTCCAACAAAAGATGATGCAA...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCAACTGGCTTTTGGATTaGGTTTGGTGTCCTTATCAT +
Preference number: 3 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTNWLLD*VWCPYH
Trigger: ATGATAAGGACACCAAACCAAATCCAAAAGCCAGTT...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACAAAAATGATGTGATGTaGCTGGTACAGCAATCTTCT +
Preference number: 3 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHKNDVM*LVQQSS
Trigger: AGAAGATTGCTGTACCAGCAACATCACATCATTTTT...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACTTTCACTGTAAGTTaGACGCCAACACTGTTCACC +
Preference number: 3 (lower is better)
Translates to: FHLQSLWNPGIVFALVALTFTVS*TPTLFT
Trigger: GGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGT...TAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTAAGAGAAGACGGCTTTaGCTGTACGGCAGATACACC +
Preference number: 3 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVKRRRL*LYGRYT
Trigger: GGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCTT...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGCTGGTCCTTGAACTGTaGGAACTCTTTTTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQALVLEL*ELFFQN
Trigger: ATTTTGGAAAAAGAGTTCCAACAGTTCAAGGACCAG...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGCTGGTCCTTGAACTGTaGGAACTCTTTTTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGLVLEL*ELFFQN
Trigger: ATTTTGGAAAAAGAGTTCCAACAGTTCAAGGACCAG...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTATTTAAGACGAGCCATTaGACTTTCTTGCTCCCTCTG +
Preference number: 3 (lower is better)
Translates to: FHLQSLWNPGIVFALVALFKTSH*TFLLPL
Trigger: CAGAGGGAGCAAGAAAGTCAAATGGCTCGTCTTAAA...TAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR TCA 72 bp ATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTaGTTATACACACCCGTTCTCATCAAAGTATCCCTT +
Preference number: 3 (lower is better)
Translates to: ICRSSSLIIRSS*LYTPVLIKVSL
Trigger: AAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCCCACTTCACTTTCTGTaGCATCATCTTTTGTTGGAG +
Preference number: 3 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAPLHFL*HHLLLE
Trigger: CTCCAACAAAAGATGATGCAACAGAAAGTGAAGTGG...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAACCACTTCACTTTCTGTaGCATCATCTTTTGTTGGAG +
Preference number: 3 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKPLHFL*HHLLLE
Trigger: CTCCAACAAAAGATGATGCAACAGAAAGTGAAGTGG...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCCCACTTCACTTTCTGTaGCATCATCTTTTGTTGGAG +
Preference number: 3 (lower is better)
Translates to: HLLFDPRDYTHPFSSKYPPLHFL*HHLLLE
Trigger: CTCCAACAAAAGATGATGCAACAGAAAGTGAAGTGG...GGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAACTGGCTTTTGGATTaGGTTTGGTGTCCTTATCAT +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSNWLLD*VWCPYH
Trigger: ATGATAAGGACACCAAACCAAATCCAAAAGCCAGTT...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCCAGAAGAACTGGCTTTaGGATTTGGTTTGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: SHQSIPFFYQASQIIIQTQKNWL*DLVWCP
Trigger: AGGACACCAAACCAAATCCAAAAGCCAGTTCTTCTG...GGTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp AGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCCTTAAAAATGATGTGATGTaGCTGGTACAGCAATCTTCT +
Preference number: 3 (lower is better)
Translates to: SQIIIQTFFQYTAMGAILKNDVM*LVQQSS
Trigger: AGAAGATTGCTGTACCAGCAACATCACATCATTTTT...AAGGATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAAAAATGATGTGATGTaGCTGGTACAGCAATCTTCT +
Preference number: 3 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCKNDVM*LVQQSS
Trigger: AGAAGATTGCTGTACCAGCAACATCACATCATTTTT...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTACTTTCACTGTAAGTTaGACGCCAACACTGTTCACC +
Preference number: 3 (lower is better)
Translates to: SLWNPGIVFALVALTCSITFTVS*TPTLFT
Trigger: GGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGT...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATCGGATTTCTGGTTTGTaGTTTTGCTGGTCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: ISVESWYCFCSCCLNLFNRISGL*FCWSLN
Trigger: GTTCAAGGACCAGCAAAACAACAAACCAGAAATCCG...ATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTTGCACTGATCTTGCTTaGTTTTCAAACTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: TGHCINPMSESRALLKTICTDLA*FSNLSL
Trigger: AAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCA...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGGTGGGAAACGTTGCTTaGAGGACAAATGTTGGCTCT +
Preference number: 3 (lower is better)
Translates to: IKELLRVFIQTGHCINPMVGNVA*RTNVGS
Trigger: AGAGCCAACATTTGTCCTCAAAGCAACGTTTCCCAC...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAATATCCTACTCTGCTTaGATGGAAGTTATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSISYSA*MEVIGN
Trigger: GTTACCAATAACTTCCATCAAAGCAGAGTAGGATAT...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAGGCTCAAAGTTTGGGTaGATTAAATCATTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: PFSSKYPFLLSGESNNHPGSKFG*IKSLKG
Trigger: ACCCTTCAATGATTTAATCAACCCAAACTTTGAGCC...TGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACTTGCATCATCTTTTGTaGGAGGTGACTGGTTGTGAG +
Preference number: 3 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNLHHLL*EVTGCE
Trigger: CTCACAACCAGTCACCTCCAACAAAAGATGATGCAA...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAACTGTTGCATCATCTTTaGTTGGAGGTGACTGGTTGT +
Preference number: 3 (lower is better)
Translates to: ELLRVFIQTGHCINPMSELLHHL*LEVTGC
Trigger: ACAACCAGTCACCTCCAACAAAAGATGATGCAACAG...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCAAAGAATAACTGGCTTTTGGATTaGGTTTGGTGTCCTTATCAT +
Preference number: 3 (lower is better)
Translates to: FRTSTGGLVIIGAALPKNNWLLD*VWCPYH
Trigger: ATGATAAGGACACCAAACCAAATCCAAAAGCCAGTT...ATTCTTTGGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGTTCGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATTCCTCTTCGAGCTGTTaGATTTTTAACCTTTCTAGT +
Preference number: 3 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYSSSSC*IFNLSS
Trigger: ACTAGAAAGGTTAAAAATCAAACAGCTCGAAGAGGA...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCATCCTCTTCGAGCTGTTaGATTTTTAACCTTTCTAGT +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSSSSSC*IFNLSS
Trigger: ACTAGAAAGGTTAAAAATCAAACAGCTCGAAGAGGA...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACAGCATCATTAAGCTGTaGCTGAAGGCGGTGTTTATC +
Preference number: 3 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNSIIKL*LKAVFI
Trigger: GATAAACACCGCCTTCAGCAACAGCTTAATGATGCT...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAACTGGTCCTTGAACTGTaGGAACTCTTTTTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKLVLEL*ELFFQN
Trigger: ATTTTGGAAAAAGAGTTCCAACAGTTCAAGGACCAG...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCATATATCCAACAATTCTaGTCGCTCGGTTTTTACTGT +
Preference number: 3 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSYIQQF*SLGFYC
Trigger: ACAGTAAAAACCGAGCGACAAGAATTGTTGGATATA...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR GCA 72 bp AAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTaGATAAATCCAATGAGTGAATCTCGTGCGCTTTTG +
Preference number: 3 (lower is better)
Translates to: KELLRVFIQTGH*INPMSESRALL
Trigger: CAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCTGCACTGATCTTGCTTaGTTTTCAAACTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: QSQATHNAIESKQSQHFTCTDLA*FSNLSL
Trigger: AAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCA...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATATCCTACTCTGCTTaGATGGAAGTTATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAISYSA*MEVIGN
Trigger: GTTACCAATAACTTCCATCAAAGCAGAGTAGGATAT...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCATATCCTACTCTGCTTaGATGGAAGTTATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: QSQATHNAIESKQSQHFTISYSA*MEVIGN
Trigger: GTTACCAATAACTTCCATCAAAGCAGAGTAGGATAT...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTGCTTTTGGATTTGGTTaGGTGTCCTTATCATACTGT +
Preference number: 3 (lower is better)
Translates to: SLWNPGIVFALVALTCSIAFGFG*VSLSYC
Trigger: ACAGTATGATAAGGACACCAAACCAAATCCAAAAGC...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATAACTGGCTTTTGGATTaGGTTTGGTGTCCTTATCAT +
Preference number: 3 (lower is better)
Translates to: ISVESWYCFCSCCLNLFNNWLLD*VWCPYH
Trigger: ATGATAAGGACACCAAACCAAATCCAAAAGCCAGTT...ATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGAAGAAAAACTTCCATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATACAGAAGAACTGGCTTTaGGATTTGGTTTGGTGTCCT +
Preference number: 3 (lower is better)
Translates to: GRKTSMFFRTSTGGLVIIQKNWL*DLVWCP
Trigger: AGGACACCAAACCAAATCCAAAAGCCAGTTCTTCTG...TATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATGGAAGTTTTTCTTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAAAAATGATGTGATGTaGCTGGTACAGCAATCTTCT +
Preference number: 3 (lower is better)
Translates to: FPLAISVESWYCFCSCCLKNDVM*LVQQSS
Trigger: AGAAGATTGCTGTACCAGCAACATCACATCATTTTT...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTCTGGTCCTTGAACTGTaGGAACTCTTTTTCCAAAAT +
Preference number: 3 (lower is better)
Translates to: SLWNPGIVFALVALTCSILVLEL*ELFFQN
Trigger: ATTTTGGAAAAAGAGTTCCAACAGTTCAAGGACCAG...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGCGGATTTCTGGTTTGTaGTTTTGCTGGTCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWRISGL*FCWSLN
Trigger: GTTCAAGGACCAGCAAAACAACAAACCAGAAATCCG...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGCGGATTTCTGGTTTGTaGTTTTGCTGGTCCTTGAAC +
Preference number: 3 (lower is better)
Translates to: IKELLRVFIQTGHCINPMRISGL*FCWSLN
Trigger: GTTCAAGGACCAGCAAAACAACAAACCAGAAATCCG...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATTTTATCCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTATCCAAGGCAAAACATaGGAGTTTGATAGGAGTACG +
Preference number: 3 (lower is better)
Translates to: ILSLCHSSTSNGILKKVSIQGKT*EFDRST
Trigger: CGTACTCCTATCAAACTCCAATGTTTTGCCTTGGAT...AGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGGATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR-3UTR CAA 90 bp TGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATATTATTTTGGTGCCTGCTTaGTTTCTTGAGCGGTTCTTA +
Preference number: 3 (lower is better)
Translates to: WLLCTDLALFSNLSLANIILVPA*FLERFL
Trigger: TAAGAACCGCTCAAGAAACAAAGCAGGCACCAAAAT...AATATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675686.1
3UTR GCA 72 bp CCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTaGTCTTGTTGCCTTAACCTGTTCAATTCATTTCTT +
Preference number: 3 (lower is better)
Translates to: PLAISVESWYCF*SCCLNLFNSFL
Trigger: AAGAAATGAATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTTGCACTGATCTTGCTTaGTTTTCAAACTTGTCACTT +
Preference number: 3 (lower is better)
Translates to: KQSQATHNAIESKQSQHFCTDLA*FSNLSL
Trigger: AAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCA...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGATTAGTCATAATAGGAGCTGCACTTCCAAAGAATGGATATGAGTACCTTAATGGCTCAAAGTTTGGGTaGATTAAATCATTGAAGGGT +
Preference number: 3 (lower is better)
Translates to: GLVIIGAALPKNGYEYLNGSKFG*IKSLKG
Trigger: ACCCTTCAATGATTTAATCAACCCAAACTTTGAGCC...ATTAAGGTACTCATATCCATTCTTTGGAAGTGCAGCTCCTATTATGACTAATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATTTCCTCTTCGAGCTGTTaGATTTTTAACCTTTCTAGT +
Preference number: 3 (lower is better)
Translates to: SLWNPGIVFALVALTCSISSSSC*IFNLSS
Trigger: ACTAGAAAGGTTAAAAATCAAACAGCTCGAAGAGGA...AATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp TGCCTTAACCTGTTCAATTCATTTCTTATATCCAACAATTCTTGTCGCTCGGTTTTGTTTTGCTGGTCCTaGAACTGTTGGAACTCTTTT +
Preference number: 3 (lower is better)
Translates to: CLNLFNSFLISNNSCRSVLFCWS*NCWNSF
Trigger: AAAAGAGTTCCAACAGTTCAAGGACCAGCAAAACAA...AACCGAGCGACAAGAATTGTTGGATATAAGAAATGAATTGAACAGGTTAAGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGTGAAATATCCTACTCTGCTTaGATGGAAGTTATTGGTAAC +
Preference number: 3 (lower is better)
Translates to: ELLRVFIQTGHCINPMSEISYSA*MEVIGN
Trigger: GTTACCAATAACTTCCATCAAAGCAGAGTAGGATAT...TTCACTCATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp GGAAGAAAAACTTCCATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAAACTGGCTTTTGGATTaGGTTTGGTGTCCTTATCAT +
Preference number: 3 (lower is better)
Translates to: GRKTSMFFRTSTGGLVIINWLLD*VWCPYH
Trigger: ATGATAAGGACACCAAACCAAATCCAAAAGCCAGTT...TATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATGGAAGTTTTTCTTCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
3UTR-3UTR CAA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGTTGTTTTGCTGGTCCTaGAACTGTTGGAACTCTTTT +
Preference number: 3 (lower is better)
Translates to: IKELLRVFIQTGHCINPMLFCWS*NCWNSF
Trigger: AAAAGAGTTCCAACAGTTCAAGGACCAGCAAAACAA...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
3UTR TCA 72 bp CCAAAGAATGGATATGAGTACCCCCTTTTAGTCCACTaGTTTAACAAATGTTATAACTTCTTTGGTGACATT +
Preference number: 3 (lower is better)
Translates to: PKNGYEYPLLVH*FNKCYNFFGDI
Trigger: AATGTCACCAAAGAAGTTATAACATTTGTTAAATCAGTGGACTAAAAGGGGGTACTCATATCCATTCTTTGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000513565.6
ENST00000674667.1
ENST00000675104.1
CDS-3UTR TCA 90 bp TGCTGGTCCAATCTGATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: CWSNLMVASLFIQHSHNVRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...GACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTARPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACCCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGCCACGCTGCAGCCCTaGCAGTCTGCAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GGSRVKAPSTVTGCWLISATLQP*QSASRD
Trigger: GTCTCTGCTTGCAGACTGGCAGGGCTGCAGCGTGGC...AGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTGATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGAGGAAAAAGCCACGCTaGAGCCCTGCCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LMVASLFIQHSHNVPGVKRKKPR*SPASLQ
Trigger: TTGCAGACTGGCAGGGCTGCAGCGTGGCTTTTTCCT...CTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTCCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: TGHCINPMSESRALLKTIPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCACCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTTTGGAGACCATGGTTaGGGTGAGCGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SCSLCLSLASSFKARPHCFGDHG*GERSGG
Trigger: GCCCCCGGACCGCTCACCGCAACCATGGTCTCCAAA...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTGGCCCGCAGGCCCAGTaGCCAGGGGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: TGHCINPMSESRALLKTIGPQAQ*PGEVGG
Trigger: TCCTCCAACCTCCCCTGGGCACTGGGCCTGCGGGCC...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTGGCCCGCAGGCCCAGTaGCCAGGGGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILGPQAQ*PGEVGG
Trigger: TCCTCCAACCTCCCCTGGGCACTGGGCCTGCGGGCC...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGCCACGCTGCAGCCCTaGCAGTCTGCAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHATLQP*QSASRD
Trigger: GTCTCTGCTTGCAGACTGGCAGGGCTGCAGCGTGGC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGCCACGCTGCAGCCCTaGCAGTCTGCAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKATLQP*QSASRD
Trigger: GTCTCTGCTTGCAGACTGGCAGGGCTGCAGCGTGGC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCACCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PFSSKYPFLLSGESNNHPPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...TGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAACCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LYTPVLIKVSLSSIRRVKPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...TTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAACCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SCGFSALILLCFQTCHLQPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCCTACGGATAGAGTCCTaGAGTTCTTGCAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVLRIES*SSCRFR
Trigger: GCGGAACCTGCAAGAACTGCAGGACTCTATCCGTAG...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCAGGGGACACTGTTGGTaGTTTTGGCCCAGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVRGHCW*FWPSKC
Trigger: ACACTTACTGGGCCAAAATCACCAACAGTGTCCCCT...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCGGCCCGCAGGCCCAGTaGCCAGGGGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAGPQAQ*PGEVGG
Trigger: TCCTCCAACCTCCCCTGGGCACTGGGCCTGCGGGCC...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGGACCTTTTGCCGCCTaGGTAGCCGCTTTTCAAACG +
Preference number: 4 (lower is better)
Translates to: GGSRVKAPSTVTGCWLISGPFAA*VAAFQT
Trigger: CGTTTGAAAAGCGGCTACGCAGGCGGCAAAAGGTCC...AGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCACCCGAGGACCTTTTaGCGCCTGCGTAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHHPRTF*RLRSRF
Trigger: AAAGCGGCTACGCAGGCGGCAAAAGGTCCTCGGGTG...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTGCTTTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGCCACGCTGCAGCCCTaGCAGTCTGCAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LLCILTFHEALSGSLKDKATLQP*QSASRD
Trigger: GTCTCTGCTTGCAGACTGGCAGGGCTGCAGCGTGGC...CTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAAAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACCCACCGCCGTCTGCTaGAGCGCGCCCGGCTCCTCT +
Preference number: 4 (lower is better)
Translates to: NLSDLSVEFTYYSILVIIPTAVC*SAPGSS
Trigger: AGAGGAGCCGGGCGCGCTGCAGCAGACGGCGGTGGG...TATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACTTTGGAGACCATGGTTaGGGTGAGCGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHFGDHG*GERSGG
Trigger: GCCCCCGGACCGCTCACCGCAACCATGGTCTCCAAA...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAGGGGGCGAAGGCGGCTaGGGGGAAGTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQGGEGG*GEVRSS
Trigger: ACTGGACCTCACTTCCCCCCAGCCGCCTTCGCCCCC...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CTGATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGCTCAGTAGCAAATTCTaGCTGGTCAGTGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LMVASLFIQHSHNVPGVKLSSKF*LVSVVH
Trigger: GTGGACCACACTGACCAGCCAGAATTTGCTACTGAG...CTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGAAGTGAGGTCCAGTTaGGTCGCGGGTAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHEVRSS*VAGNPG
Trigger: TCCCGGATTACCCGCGACTCAACTGGACCTCACTTC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGAAGTGAGGTCCAGTTaGGTCGCGGGTAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKEVRSS*VAGNPG
Trigger: TCCCGGATTACCCGCGACTCAACTGGACCTCACTTC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TCTGTTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGCCTGGGTGACAGAGTaGGATCCTTTTCCATCTCGA +
Preference number: 4 (lower is better)
Translates to: SVWRVKGKSTFDCDWVLVAWVTE*DPFPSR
Trigger: TCGAGATGGAAAAGGATCTCACTCTGTCACCCAGGC...AACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000675814.1
CDS-3UTR GCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCGGCCCGCAGGCCCAGTaGCCAGGGGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLGPQAQ*PGEVGG
Trigger: TCCTCCAACCTCCCCTGGGCACTGGGCCTGCGGGCC...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACCACCCGAGGACCTTTTaGCGCCTGCGTAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHHPRTF*RLRSRF
Trigger: AAAGCGGCTACGCAGGCGGCAAAAGGTCCTCGGGTG...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTTAGACTGAAGAGCCAGGTAAACACGAAGAATTTCTACACTGCTACGGATGCGGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: FRLKSQVNTKNFYTATDAAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...CGCATCCGTAGCAGTGTAGAAATTCTTCGTGTTTACCTGGCTCTTCAGTCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCAGGAAAAAGCCACGCTaGAGCCCTGCCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTARKKPR*SPASLQ
Trigger: TTGCAGACTGGCAGGGCTGCAGCGTGGCTTTTTCCT...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCCTTTTTGGAGACCATGGTTaGGGTGAGCGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: SQIIIQTFFQYTAMGAILFGDHG*GERSGG
Trigger: GCCCCCGGACCGCTCACCGCAACCATGGTCTCCAAA...AAGGATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCTTTGGAGACCATGGTTaGGGTGAGCGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTFGDHG*GERSGG
Trigger: GCCCCCGGACCGCTCACCGCAACCATGGTCTCCAAA...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCTTTTGGAGACCATGGTTaGGGTGAGCGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: PCAIVQPVMESLRRCLAAFGDHG*GERSGG
Trigger: GCCCCCGGACCGCTCACCGCAACCATGGTCTCCAAA...AGCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCCTTCTTCCAATACACTaGCATGGGGGCCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVLLPIH*HGGHPF
Trigger: AAAAGGATGGCCCCCATGGCAGTGTATTGGAAGAAG...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp GCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCGGGGGCGAAGGCGGCTaGGGGGAAGTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: AFCQNLSDLSVEFTYYSIGGEGG*GEVRSS
Trigger: ACTGGACCTCACTTCCCCCCAGCCGCCTTCGCCCCC...GATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTGGGGGCGAAGGCGGCTaGGGGGAAGTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: FPLAISVESWYCFCSCCLGGEGG*GEVRSS
Trigger: ACTGGACCTCACTTCCCCCCAGCCGCCTTCGCCCCC...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCTCTGGCTGGTCAGTGTaGTCCACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTASGWSV*STGSVA
Trigger: GGCTACTGATCCTGTGGACCACACTGACCAGCCAGA...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCCTGTTTGGCTCTGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVLFGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAG...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTACCGCGGGCGACTTGGTGTaGGACCAGCTGCGCAAGCGC +
Preference number: 4 (lower is better)
Translates to: QSQATHNAIESKQSQHFTAGDLV*DQLRKR
Trigger: GCGCTTGCGCAGCTGGTCCCACACCAAGTCGCCCGC...GGTAAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000306481.11
CDS-3UTR CCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAGAGAGGCGGGCGACTTaGTGTGGGACCAGCTGCGCA +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQERRAT*CGTSCA
Trigger: TGCGCAGCTGGTCCCACACCAAGTCGCCCGCCTCTC...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000306481.11
CDS-3UTR CCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCGGCTCCTTAGAGAAATaGCTGAATCCAGAGCTGAGA +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVGSLEK*LNPELR
Trigger: TCTCAGCTCTGGATTCAGCCATTTCTCTAAGGAGCC...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508138.5
CDS-3UTR CCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTGCCCAGGGGAGGTTaGAGGACAACGGGTGATAGA +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKVPRGG*RTTGDR
Trigger: TCTATCACCCGTTGTCCTCCAACCTCCCCTGGGCAC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: KQSQATHNAIESKQSQHFRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TCAAATGGAATAGGACGCAGCGTTTTTAAAGTGCAAGATATACTCTTTTGGCTCAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: SNGIGRSVFKVQDILFWLRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...GAGCCAAAAGAGTATATCTTGCACTTTAAAAACGCTGCGTCCTATTCCATTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGGAGGTGACTGGTTGTaGGATGGAACAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKGGDWL*DGTGDT
Trigger: AGTGTCCCCTGTTCCATCTCACAACCAGTCACCTCC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674667.1
ENST00000674684.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCTCTTGCAGGTTCCGCTaGCGTTCTGATTGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTASCRFR*RSDCSS
Trigger: GGAACTGCAATCAGAACGTCAGCGGAACCTGCAAGA...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGGACCTTTTGCCGCCTaGGTAGCCGCTTTTCAAACG +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHGPFAA*VAAFQT
Trigger: CGTTTGAAAAGCGGCTACGCAGGCGGCAAAAGGTCC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCCTTCACCCGAGGACCTTTTaGCGCCTGCGTAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: SQIIIQTFFQYTAMGAILHPRTF*RLRSRF
Trigger: AAAGCGGCTACGCAGGCGGCAAAAGGTCCTCGGGTG...AAGGATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAAGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAAGGAAAAAGCCACGCTaGAGCCCTGCCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKRKKPR*SPASLQ
Trigger: TTGCAGACTGGCAGGGCTGCAGCGTGGCTTTTTCCT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATCGGGAGGCAGCAGTTaGAAAAGCAAGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKSGGSS*KSKPQA
Trigger: AGCCTGAGGCTTGCTTTTGCAACTGCTGCCTCCCGA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000508442.7
ENST00000675442.1
CDS-3UTR CCA 90 bp ATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCTGTTCAATGGGGGCGAAGGCGGCTaGGGGGAAGTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ISVESWYCFCSCCLNLFNGGEGG*GEVRSS
Trigger: ACTGGACCTCACTTCCCCCCAGCCGCCTTCGCCCCC...ATTGAACAGGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp GCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTGGGGGCGAAGGCGGCTaGGGGGAAGTGAGGTCCAGT +
Preference number: 4 (lower is better)
Translates to: ALLFAKISLICRSSSLIIGGEGG*GEVRSS
Trigger: ACTGGACCTCACTTCCCCCCAGCCGCCTTCGCCCCC...AATAATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTTCTGGCTGGTCAGTGTaGTCCACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSASGWSV*STGSVA
Trigger: GGCTACTGATCCTGTGGACCACACTGACCAGCCAGA...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTCAAATAATCATCCAAACAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: FSSKYPFLLSGESNNHPNRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...GTTTGGATGATTATTTGACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSAATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACGGAGGTGACTGGTTGTaGGATGGAACAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHGGDWL*DGTGDT
Trigger: AGTGTCCCCTGTTCCATCTCACAACCAGTCACCTCC...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674667.1
ENST00000674684.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TGCTGGTCCAATCTGATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCTTGCCAAAATCTCTCTaGTCTGTCGGTCGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: CWSNLMVASLFIQHSHNVLPKSL*SVGRVH
Trigger: GTGAACTCGACCGACAGATCAGAGAGATTTTGGCAA...GACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCGTGGCTTCTCTGCACTaGTCTTGCTTTGTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVVASLH*SCFVFK
Trigger: TTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCAC...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACAGAACTGTAGTCCCCTaGGTCCTCCAGCAAGACGTG +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHRTVVP*VLQQDV
Trigger: CACGTCTTGCTGGAGGACTCAGGGGACTACAGTTCT...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000508442.7
ENST00000675442.1
ENST00000675686.1
CDS-3UTR GCA 90 bp GACCGAAAATTAATGTTACCATATATCCTACTCTGCTTTGATGGAAGTTATTGGGGCCCGCAGGCCCAGTaGCCAGGGGAGGTTGGAGGA +
Preference number: 4 (lower is better)
Translates to: DRKLMLPYILLCFDGSYWGPQAQ*PGEVGG
Trigger: TCCTCCAACCTCCCCTGGGCACTGGGCCTGCGGGCC...CCAATAACTTCCATCAAAGCAGAGTAGGATATATGGTAACATTAATTTTCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGGACCTTTTGCCGCCTaGGTAGCCGCTTTTCAAACG +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVGPFAA*VAAFQT
Trigger: CGTTTGAAAAGCGGCTACGCAGGCGGCAAAAGGTCC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTCACCCGAGGACCTTTTaGCGCCTGCGTAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILHPRTF*RLRSRF
Trigger: AAAGCGGCTACGCAGGCGGCAAAAGGTCCTCGGGTG...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCACACCCGAGGACCTTTTaGCGCCTGCGTAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSHPRTF*RLRSRF
Trigger: AAAGCGGCTACGCAGGCGGCAAAAGGTCCTCGGGTG...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTGCCACGCTGCAGCCCTaGCAGTCTGCAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: LAFESSHRQHTMQLKVNSATLQP*QSASRD
Trigger: GTCTCTGCTTGCAGACTGGCAGGGCTGCAGCGTGGC...ACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTTCCACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTTTTGGAGACCATGGTTaGGGTGAGCGGTCCGGGGGC +
Preference number: 4 (lower is better)
Translates to: FPLAISVESWYCFCSCCLFGDHG*GERSGG
Trigger: GCCCCCGGACCGCTCACCGCAACCATGGTCTCCAAA...AAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTGGAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGGACGTTTGGGGAAATaGCGACCTTCTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHGRLGK*RPSRMD
Trigger: GTCCATCCTAGAAGGTCGGCATTTCCCCAAACGTCC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATCCACACTAGCAAGCTaGTGCTCTCGCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKSTLAS*CSRFSK
Trigger: CTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGTGGA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCTGTTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGGAGGTGGGAAACGTTaGTTTGAGGACAAATGTTGG +
Preference number: 4 (lower is better)
Translates to: SVWRVKGKSTFDCDWVLVGGGKR*FEDKCW
Trigger: CCAACATTTGTCCTCAAAGCAACGTTTCCCACCTCC...AACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTTGGTGTGGGACCAGCTaGGCAAGCGCACTACTGCTG +
Preference number: 4 (lower is better)
Translates to: TGHCINPMSESRALLKTIWCGTS*ASALLL
Trigger: CAGCAGTAGTGCGCTTGCGCAGCTGGTCCCACACCA...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306481.11
CDS-3UTR CCA 90 bp TTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FFQSSSPLLLVMQFRLSCQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...GCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: SCSLCLSLASSFKARPHCTVTGC*LISVLP
Trigger: GGGCAGTACAGAAATCAACCAGCACCCAGTCACAGT...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACGAAGTGAGGTCCAGTTaGGTCGCGGGTAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: LSDLSVEFTYYSILVIIHEVRSS*VAGNPG
Trigger: TCCCGGATTACCCGCGACTCAACTGGACCTCACTTC...GTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GATATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: DIKELLRVFIQTGHCINPRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...TGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ATAAAGGAACTCTTAAGAGTTTTTATACAGACAGGGCACTGCATAAATCCAATGAGACCATGGTTGCGGTaGGCGGTCCGGGGGCGAAGG +
Preference number: 4 (lower is better)
Translates to: IKELLRVFIQTGHCINPMRPWLR*AVRGRR
Trigger: CCTTCGCCCCCGGACCGCTCACCGCAACCATGGTCT...CATTGGATTTATGCAGTGCCCTGTCTGTATAAAAACTCTTAAGAGTTCCTTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACGGATGGACACGACGATaGGCAATTGGTCGGATTTGG +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHGWTRR*AIGRIW
Trigger: CCAAATCCGACCAATTGCTCATCGTCGTGTCCATCC...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTGGATGGACACGACGATaGGCAATTGGTCGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LYSNVSRGSVWISEGQGAGWTRR*AIGRIW
Trigger: CCAAATCCGACCAATTGCTCATCGTCGTGTCCATCC...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGGATGGACACGACGATaGGCAATTGGTCGGATTTGG +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVGWTRR*AIGRIW
Trigger: CCAAATCCGACCAATTGCTCATCGTCGTGTCCATCC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATTCTGTACTTCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKFCTSK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGAAGTACAGAA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAAGGGGACACTGTTGGTaGTTTTGGCCCAGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKRGHCW*FWPSKC
Trigger: ACACTTACTGGGCCAAAATCACCAACAGTGTCCCCT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 10 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674667.1
ENST00000674684.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATAGGGGACACTGTTGGTaGTTTTGGCCCAGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHRGHCW*FWPSKC
Trigger: ACACTTACTGGGCCAAAATCACCAACAGTGTCCCCT...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674667.1
ENST00000674684.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATGCAAGAGCCTGCATATaGGCCAGTTCTTTCTGCTTC +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHARACI*ASSFCF
Trigger: GAAGCAGAAAGAACTGGCTCATATGCAGGCTCTTGC...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 4 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQAAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAACAGTCACAGCATTTTGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: KQSQATHNAIESKQSQHFAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...AAAATGCTGTGACTGTTTACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: MWLLCTDLALFSNLSLANAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATTATTGCAGCCCTGCCAGTCTaGAAGCAGAGACAAGCCCGC +
Preference number: 4 (lower is better)
Translates to: ALLFAKISLICRSSSLIIAALPV*KQRQAR
Trigger: GCGGGCTTGTCTCTGCTTGCAGACTGGCAGGGCTGC...AATAATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCAGGAAAAAGCCACGCTaGAGCCCTGCCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: SLCHSSTSNGILKKVSCSRKKPR*SPASLQ
Trigger: TTGCAGACTGGCAGGGCTGCAGCGTGGCTTTTTCCT...GCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGGACGTTTGGGGAAATaGCGACCTTCTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVGRLGK*RPSRMD
Trigger: GTCCATCCTAGAAGGTCGGCATTTCCCCAAACGTCC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000306467.10
ENST00000328236.10
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCCTTTTTGGACGTTTGGGGAAATaGCGACCTTCTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: KSTFDCDWVLVDFCTALFGRLGK*RPSRMD
Trigger: GTCCATCCTAGAAGGTCGGCATTTCCCCAAACGTCC...AAAAAGGGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGTCAGTACAGTATTCTGCTGGTCCAATCTGATGGTAGCCTCCCTCTTCATTCAAGGGGGAGCCCCCTTTaGTTTAAAGCTATCCACTGG +
Preference number: 4 (lower is better)
Translates to: SQYSILLVQSDGSLPLHSRGSPL*FKAIHW
Trigger: CCAGTGGATAGCTTTAAAGCAAAGGGGGCTCCCCCT...TGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCAGAATACTGTACTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAACTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAACACTAGCAAGCTGCTaGTCTCGCTTCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKTLASC*SRFSKS
Trigger: TGACTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGT...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACTCCACACTAGCAAGCTaGTGCTCTCGCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHSTLAS*CSRFSK
Trigger: CTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGTGGA...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGTCAGTACAGTATTCTGCTGGTCCAATCTGATGGTAGCCTCCCTCTTCATTCATCCACACTAGCAAGCTaGTGCTCTCGCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: SQYSILLVQSDGSLPLHSSTLAS*CSRFSK
Trigger: CTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGTGGA...TGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCAGAATACTGTACTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTACTACGGATAGAGTCCTaGAGTTCTTGCAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVLRIES*SSCRFR
Trigger: GCGGAACCTGCAAGAACTGCAGGACTCTATCCGTAG...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAGGACGTTTGGGGAAATaGCGACCTCACAGCGCCCTC +
Preference number: 4 (lower is better)
Translates to: SCGFSALILLCFQTCHLQGRLGK*RPHSAL
Trigger: GAGGGCGCTGTGAGGTCGGCATTTCCCCAAACGTCC...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306481.11
CDS-3UTR GCA 90 bp AAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGATTTCTGTACTGCCCTGTGCCTGATAAGATaGAATGGGAAGAACGTGGCA +
Preference number: 4 (lower is better)
Translates to: KGKSTFDCDWVLVDFCTALCLIR*NGKNVA
Trigger: TGCCACGTTCTTCCCATTGCATCTTATCAGGCACAG...GGCAGTACAGAAATCAACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508138.5
CDS-3UTR GCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACAAGCAAGCCTCAGGCTaGTCACCTTCTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHKQASG*SPSRMD
Trigger: GTCCATCCTAGAAGGTGAGCAGCCTGAGGCTTGCTT...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000508442.7
ENST00000675442.1
CDS-3UTR CCA 90 bp TCTGTTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTTATGCTTTGGACGTTTaGGGAAATGCCGACCTTCTA +
Preference number: 4 (lower is better)
Translates to: SVWRVKGKSTFDCDWVLVYALDV*GNADLL
Trigger: TAGAAGGTCGGCATTTCCCCAAACGTCCAAAGCATA...AACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTTCTGGCTGGTCAGTGTaGTCCACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLSGWSV*STGSVA
Trigger: GGCTACTGATCCTGTGGACCACACTGACCAGCCAGA...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCTTTAAAGCTATCCACTaGTGGCTTTGTATCGGTTTC +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVFKAIH*WLCIGF
Trigger: GAAACCGATACAAAGCCACCAGTGGATAGCTTTAAA...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: TGHCINPMSESRALLKTIQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp GGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: GESNNHPNLLPIHCHGGHTVTGC*LISVLP
Trigger: GGGCAGTACAGAAATCAACCAGCACCCAGTCACAGT...ATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTACTGTGACTGGGTGCTaGTTGATTTCTGTACTGCCC +
Preference number: 4 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSATVTGC*LISVLP
Trigger: GGGCAGTACAGAAATCAACCAGCACCCAGTCACAGT...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKDVVTS*ASEAGT
Trigger: TGTACCTGCTTCACTGGCCCAGCTAGTGACTACATC...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp AGTCAGTACAGTATTCTGCTGGTCCAATCTGATGGTAGCCTCCCTCTTCATTCACAAGTCCAGCCAGGATaGCAGGTACTAGCACCTAGA +
Preference number: 4 (lower is better)
Translates to: SQYSILLVQSDGSLPLHSQVQPG*QVLAPR
Trigger: TCTAGGTGCTAGTACCTGCCATCCTGGCTGGACTTG...TGAATGAAGAGGGAGGCTACCATCAGATTGGACCAGCAGAATACTGTACTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508138.5
CDS-3UTR CCA 90 bp GTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGAGTGTGCCCAGGGGAGGTTaGAGGACAACGGGTGATAGA +
Preference number: 4 (lower is better)
Translates to: VIIHTRSHQSIPFFYQASVPRGG*RTTGDR
Trigger: TCTATCACCCGTTGTCCTCCAACCTCCCCTGGGCAC...ACTCGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675814.1
3UTR CAA 72 bp ACAGCAATCTTCTGTCCTGAAGCTACTTCTGAAGCATaGGATGTAGTCACTAGCTGGGCCAGTGAAGCAGGT +
Preference number: 4 (lower is better)
Translates to: TAIFCPEATSEA*DVVTSWASEAG
Trigger: ACCTGCTTCACTGGCCCAGCTAGTGACTACATCCAATGCTTCAGAAGTAGCTTCAGGACAGAAGATTGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TCATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAGAAGTGAGGTCCAGTTaGGTCGCGGGTAATCCGGGA +
Preference number: 4 (lower is better)
Translates to: SCGFSALILLCFQTCHLQEVRSS*VAGNPG
Trigger: TCCCGGATTACCCGCGACTCAACTGGACCTCACTTC...TTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGATGGACACGACGATaGGCAATTGGTCGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGGWTRR*AIGRIW
Trigger: CCAAATCCGACCAATTGCTCATCGTCGTGTCCATCC...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCGGATGGACACGACGATaGGCAATTGGTCGGATTTGG +
Preference number: 4 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTGWTRR*AIGRIW
Trigger: CCAAATCCGACCAATTGCTCATCGTCGTGTCCATCC...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTGCTACGGATGCGAACTaGTGCTCTCTCTGGCTCAAA +
Preference number: 4 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLATDAN*CSLWLK
Trigger: TTTGAGCCAGAGAGAGCATCAGTTCGCATCCGTAGC...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGAGGGGACACTGTTGGTaGTTTTGGCCCAGTAAGTGT +
Preference number: 4 (lower is better)
Translates to: FKSGKFFQSSSPLLLVMQRGHCW*FWPSKC
Trigger: ACACTTACTGGGCCAAAATCACCAACAGTGTCCCCT...CTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674667.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCGGAGGTGACTGGTTGTaGGATGGAACAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: HLQSLWNPGIVFALVALTGGDWL*DGTGDT
Trigger: AGTGTCCCCTGTTCCATCTCACAACCAGTCACCTCC...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674667.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAGGAGGTGACTGGTTGTaGGATGGAACAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: GRVHLLFDPRDYTHPFSSGGDWL*DGTGDT
Trigger: AGTGTCCCCTGTTCCATCTCACAACCAGTCACCTCC...TGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674667.1
ENST00000674684.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCCTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: HLQSLWNPGIVFALVALTLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp TTTATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FISLNQRPPLAFESSHRQLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...TTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAATAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATCTCTGTCTGGATCTCTaGAGGACAAGGTGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYLCLDL*RTRCWR
Trigger: CCTCCAGCACCTTGTCCTTCAGAGATCCAGACAGAG...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATTGCCAAAATCTCTCTaGTCTGTCGGTCGAGTTCAC +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKLPKSL*SVGRVH
Trigger: GTGAACTCGACCGACAGATCAGAGAGATTTTGGCAA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp GATGGTAGCCTCCCTCTTCATTCAGCACAGCCACAATGTCCCTGGGGTCAAGTCTGCAAATTCCTGCTATaGTTCAGATTCATTATCCTC +
Preference number: 4 (lower is better)
Translates to: DGSLPLHSAQPQCPWGQVCKFLL*FRFIIL
Trigger: GAGGATAATGAATCTGAATCATAGCAGGAATTTGCA...GACTTGACCCCAGGGACATTGTGGCTGTGCTGAATGAAGAGGGAGGCTACCATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000508138.5
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 4 (lower is better)
Translates to: TGHCINPMSESRALLKTIAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 4 (lower is better)
Translates to: HVFPNFYRRISHNRSCTSAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...GGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATGCCCCCTCTAGCGTTTaGAAGCAGTCACAGGCAACA +
Preference number: 4 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYAPSSV*KQSQAT
Trigger: TGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGC...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GACACAGAGGGCTTCCAAAGCATTCATCATAATGCTCTGTTTCTTAAACCAGGAGGACCTTTTGCCGCCTaGGTAGCCGCTTTTCAAACG +
Preference number: 4 (lower is better)
Translates to: DTEGFQSIHHNALFLKPGGPFAA*VAAFQT
Trigger: CGTTTGAAAAGCGGCTACGCAGGCGGCAAAAGGTCC...TCCTGGTTTAAGAAACAGAGCATTATGATGAATGCTTTGGAAGCCCTCTGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000513565.6
CDS-3UTR GCA 90 bp CAGCTGATGAGGCATAGTTGCAAAATCAAATGCACAGTAAGACTGGGGAAGAAAGGACCTTTTGCCGCCTaGGTAGCCGCTTTTCAAACG +
Preference number: 4 (lower is better)
Translates to: QLMRHSCKIKCTVRLGKKGPFAA*VAAFQT
Trigger: CGTTTGAAAAGCGGCTACGCAGGCGGCAAAAGGTCC...TTTCTTCCCCAGTCTTACTGTGCATTTGATTTTGCAACTATGCCTCATCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ACTGGCATTGCTTTTTGCCAAAATCTCTCTGATCTGTCGGTCGAGTTCACTTATGGACCTTTTGCCGCCTaGGTAGCCGCTTTTCAAACG +
Preference number: 4 (lower is better)
Translates to: TGIAFCQNLSDLSVEFTYGPFAA*VAAFQT
Trigger: CGTTTGAAAAGCGGCTACGCAGGCGGCAAAAGGTCC...ATAAGTGAACTCGACCGACAGATCAGAGAGATTTTGGCAAAAAGCAATGCCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp ATGTGGCTTCTCTGCACTGATCTTGCTTTGTTTTCAAACTTGTCACTTGCAAATCACCCGAGGACCTTTTaGCGCCTGCGTAGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: MWLLCTDLALFSNLSLANHPRTF*RLRSRF
Trigger: AAAGCGGCTACGCAGGCGGCAAAAGGTCCTCGGGTG...ATTTGCAAGTGACAAGTTTGAAAACAAAGCAAGATCAGTGCAGAGAAGCCACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000306467.10
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp GTCCATAATCTTCTAGAGTCACTGTGTAAGAAAGATCTGCTATCCTGTTATTTGGCCACGCTGCAGCCCTaGCAGTCTGCAAGCAGAGAC +
Preference number: 4 (lower is better)
Translates to: VHNLLESLCKKDLLSCYLATLQP*QSASRD
Trigger: GTCTCTGCTTGCAGACTGGCAGGGCTGCAGCGTGGC...CAAATAACAGGATAGCAGATCTTTCTTACACAGTGACTCTAGAAGATTATGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CATGTTTTTCCGAACTTCTACAGGAGGATTAGTCATAATAGGAGCTGCACTTCCAGGAAAAAGCCACGCTaGAGCCCTGCCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: HVFPNFYRRISHNRSCTSRKKPR*SPASLQ
Trigger: TTGCAGACTGGCAGGGCTGCAGCGTGGCTTTTTCCT...GGAAGTGCAGCTCCTATTATGACTAATCCTCCTGTAGAAGTTCGGAAAAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CACTTGCAATCTCTGTGGAATCCTGGTATTGTTTTTGCTCTTGTTGCCTTAACCAGGAAAAAGCCACGCTaGAGCCCTGCCAGTCTGCAA +
Preference number: 4 (lower is better)
Translates to: HLQSLWNPGIVFALVALTRKKPR*SPASLQ
Trigger: TTGCAGACTGGCAGGGCTGCAGCGTGGCTTTTTCCT...GGTTAAGGCAACAAGAGCAAAAACAATACCAGGATTCCACAGAGATTGCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGGACGTTTGGGGAAATaGCGACCTTCTAGGATGGAC +
Preference number: 4 (lower is better)
Translates to: PRDYTHPFSSKYPFLLSGGRLGK*RPSRMD
Trigger: GTCCATCCTAGAAGGTCGGCATTTCCCCAAACGTCC...GCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCTTGCTCCCTCTGTTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCCTGGTACCATTTTGGTaGCTGCTTTGTTTCTTGAGC +
Preference number: 4 (lower is better)
Translates to: SCSLCLSLASSFKARPHCLVPFW*LLCFLS
Trigger: GCTCAAGAAACAAAGCAGGCACCAAAATGGTACCAG...GCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAACAGAGGGAGCAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCCATCCTTAGGGGGAGCCCCCTTTaGTTTAAAGCTATCCACTGG +
Preference number: 4 (lower is better)
Translates to: SQIIIQTFFQYTAMGAILRGSPL*FKAIHW
Trigger: CCAGTGGATAGCTTTAAAGCAAAGGGGGCTCCCCCT...AAGGATGGCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTACTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTTAAGTCTGGCAAGTTCTTTCAAAGCTCGTCCCCACTGCTGCTTGTAATGCAGCTACACTGCTACGGATaGGAACTGATGCTCTCTCTG +
Preference number: 4 (lower is better)
Translates to: FKSGKFFQSSSPLLLVMQLHCYG*ELMLSL
Trigger: CAGAGAGAGCATCAGTTCGCATCCGTAGCAGTGTAG...CTGCATTACAAGCAGCAGTGGGGACGAGCTTTGAAAGAACTTGCCAGACTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCTGTTTGGAGGGTCAAGGGTAAAAGCACCTTCGACTGTGACTGGGTGCTGGTTGAAGAATTTCTACACTaGTACGGATGCGAACTGATG +
Preference number: 4 (lower is better)
Translates to: SVWRVKGKSTFDCDWVLVEEFLH*YGCELM
Trigger: CATCAGTTCGCATCCGTAGCAGTGTAGAAATTCTTC...AACCAGCACCCAGTCACAGTCGAAGGTGCTTTTACCCTTGACCCTCCAAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAATCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKSTVTG*WLISVL
Trigger: CAGTACAGAAATCAACCAGCACCCAGTCACAGTCGA...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCCTTTTCTTCCATTCCTCTGCAAGAGCCTGCATATGAGCCAGTTCTTTCTGCTTCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: PFSSIPLQEPAYEPVLSASTVTG*WLISVL
Trigger: CAGTACAGAAATCAACCAGCACCCAGTCACAGTCGA...AGCAGAAAGAACTGGCTCATATGCAGGCTCTTGCAGAGGAATGGAAGAAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGGGCTCGACTGTGACTGGGTaGTGGTTGATTTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: SGESNNHPNLLPIHCHGGSTVTG*WLISVL
Trigger: CAGTACAGAAATCAACCAGCACCCAGTCACAGTCGA...GCCCCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCGTCCCCACTGCTGCTTGTAATGCAGTTTAGACTTAGTTGCAGATTCCAACTTTCTATGCCTTCTCTCTaGAGAGCCACAGACACTCCC +
Preference number: 4 (lower is better)
Translates to: SSPLLLVMQFRLSCRFQLSMPSL*RATDTP
Trigger: GGGAGTGTCTGTGGCTCTGCAGAGAGAAGGCATAGA...AAGTTGGAATCTGCAACTAAGTCTAAACTGCATTACAAGCAGCAGTGGGGACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TTGTATTCTAACGTTTCACGAGGCTCTGTCTGGATCTCTGAAGGACAAGGTGCTAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 4 (lower is better)
Translates to: LYSNVSRGSVWISEGQGAREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...AGCACCTTGTCCTTCAGAGATCCAGACAGAGCCTCGTGAAACGTTAGAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAAGAGAAGACGGCTTTTaGTGTACGGCAGATACACCC +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVREDGF*CTADTP
Trigger: GGGTGTATCTGCCGTACAGCAAAAGCCGTCTTCTCT...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCTTCCACACTAGCAAGCTaGTGCTCTCGCTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: PCAIVQPVMESLRRCLAASTLAS*CSRFSK
Trigger: CTTGGAGAAGCGAGAGCAGCAGCTTGCTAGTGTGGA...AGCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp TCCTTGTGCCATAGTTCAACCAGTAATGGAATCCTTAAGAAGGTGTCTTGCAGCCTACGGATAGAGTCCTaGAGTTCTTGCAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: SLCHSSTSNGILKKVSCSLRIES*SSCRFR
Trigger: GCGGAACCTGCAAGAACTGCAGGACTCTATCCGTAG...GCTGCAAGACACCTTCTTAAGGATTCCATTACTGGTTGAACTATGGCACAAGGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAACTTCTTCCAATACACTaGCATGGGGGCCATCCTTTT +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKLLPIH*HGGHPF
Trigger: AAAAGGATGGCCCCCATGGCAGTGTATTGGAAGAAG...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR GCA 90 bp CTCGTGATTATACACACCCGTTCTCATCAAAGTATCCCTTTCTTCTATCAGGCGCATCCTGGGAGTCTATaGCTTCTCTCTGCAGAGCCA +
Preference number: 4 (lower is better)
Translates to: LVIIHTRSHQSIPFFYQAHPGSL*LLSAEP
Trigger: TGGCTCTGCAGAGAGAAGGCATAGACTCCCAGGATG...CGCCTGATAGAAGAAAGGGATACTTTGATGAGAACGGGTGTGTATAATCACGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513565.6
CDS-3UTR GCA 90 bp ACAGGGCACTGCATAAATCCAATGAGTGAATCTCGTGCGCTTTTGAAAACGATTTCGGGAGGCAGCAGTTaGAAAAGCAAGCCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TGHCINPMSESRALLKTISGGSS*KSKPQA
Trigger: AGCCTGAGGCTTGCTTTTGCAACTGCTGCCTCCCGA...AATCGTTTTCAAAAGCGCACGAGATTCACTCATTGGATTTATGCAGTGCCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000508442.7
ENST00000675442.1
CDS-3UTR CCA 90 bp CTCTCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACTCTGGCTGGTCAGTGTaGTCCACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: LSDLSVEFTYYSILVIIHSGWSV*STGSVA
Trigger: GGCTACTGATCCTGTGGACCACACTGACCAGCCAGA...GTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGAGAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TCTGATCTGTCGGTCGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCTCTGGCTGGTCAGTGTaGTCCACAGGATCAGTAGCC +
Preference number: 4 (lower is better)
Translates to: SDLSVEFTYYSILVIIHTSGWSV*STGSVA
Trigger: GGCTACTGATCCTGTGGACCACACTGACCAGCCAGA...GGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCGACCGACAGATCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTACTCAGTAGCAAATTCTaGCTGGTCAGTGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVLSSKF*LVSVVH
Trigger: GTGGACCACACTGACCAGCCAGAATTTGCTACTGAG...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACCTCAGTAGCAAATTCTaGCTGGTCAGTGTGGTCCAC +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHLSSKF*LVSVVH
Trigger: GTGGACCACACTGACCAGCCAGAATTTGCTACTGAG...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TTCATGGTACATGGAATTAACTGTTCCAACTGGGTAGCAAATGCTATGGTCACTCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FMVHGINCSNWVANAMVTQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...AGTGACCATAGCATTTGCTACCCAGTTGGAACAGTTAATTCCATGTACCATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000508138.5
ENST00000674620.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CGAGTTCACTTATTATTCGATCCTCGTGATTATACACACCCGTTCTCATCAAAGCAGCCACAATGTCCCTaGGGTCAAGTCCAGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RVHLLFDPRDYTHPFSSKQPQCP*GQVQPG
Trigger: TCCTGGCTGGACTTGACCCCAGGGACATTGTGGCTG...CTTTGATGAGAACGGGTGTGTATAATCACGAGGATCGAATAATAAGTGAACTCG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp AGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAACTGTTTGGCTCTGTTTaGAGGGTCAAGGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: RPPLAFESSHRQHTMQLKLFGSV*RVKGKS
Trigger: GCTTTTACCCTTGACCCTCCAAACAGAGCCAAACAG...TTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp CCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACACAATGCAATTGAAAGTAGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: PPLAFESSHRQHTMQLKVDVVTS*ASEAGT
Trigger: TGTACCTGCTTCACTGGCCCAGCTAGTGACTACATC...TACTTTCAATTGCATTGTGTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 13 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508138.5
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACGATGTAGTCACTAGCTaGGCCAGTGAAGCAGGTACA +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHDVVTS*ASEAGT
Trigger: TGTACCTGCTTCACTGGCCCAGCTAGTGACTACATC...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR CCA 90 bp TTCTTCTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCGTGCCCAGGGGAGGTTaGAGGACAACGGGTGATAGA +
Preference number: 4 (lower is better)
Translates to: FFYQASQIIIQTFFQYTAVPRGG*RTTGDR
Trigger: TCTATCACCCGTTGTCCTCCAACCTCCCCTGGGCAC...GGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAGAAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675814.1
CDS-3UTR CCA 90 bp AACAGGCACACTTTCACTGTAAGTTTGACGCCAACACTGTTCACCATTAGAACCCAAGTCCAGCCAGGATaGCAGGTACGAAAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: NRHTFTVSLTPTLFTIRTQVQPG*QVRKEA
Trigger: TGCTTCCTTTCGTACCTGCCATCCTGGCTGGACTTG...GGTTCTAATGGTGAACAGTGTTGGCGTCAAACTTACAGTGAAAGTGTGCCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000674620.1
CDS-3UTR TCA 90 bp CTGTATCTTTTTCCTCAGCGGCAAGGTAACGTAGTCTCATCTGTTCCAATTCTTGGATGGACACGACGATaGGCAATTGGTCGGATTTGG +
Preference number: 4 (lower is better)
Translates to: LYLFPQRQGNVVSSVPILGWTRR*AIGRIW
Trigger: CCAAATCCGACCAATTGCTCATCGTCGTGTCCATCC...AAGAATTGGAACAGATGAGACTACGTTACCTTGCCGCTGAGGAAAAAGATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000675104.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp ATTTCTTTAAATCAGAGGCCCCCTCTAGCGTTTGAAAGCAGTCACAGGCAACACTATGGTTTCCTTGGCTaGAGTTACAGGATCCAAGGC +
Preference number: 4 (lower is better)
Translates to: ISLNQRPPLAFESSHRQHYGFLG*SYRIQG
Trigger: GCCTTGGATCCTGTAACTTCAGCCAAGGAAACCATA...GTGTTGCCTGTGACTGCTTTCAAACGCTAGAGGGGGCCTCTGATTTAAAGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000306467.10
ENST00000306481.11
ENST00000328236.10
ENST00000508442.7
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1
ENST00000675104.1
ENST00000675330.1
ENST00000675442.1
ENST00000675686.1
ENST00000675814.1
CDS-3UTR TCA 90 bp CTATCAGGCGAGTCAAATAATCATCCAAACCTTCTTCCAATACACTGCCATGGGTTCTGTACTTCCAAGTaGCTGGTCTCCACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LSGESNNHPNLLPIHCHGFCTSK*LVSTAE
Trigger: CTCTGCTGTGGAGACCAGTCACTTGGAAGTACAGAA...CCCATGGCAGTGTATTGGAAGAAGGTTTGGATGATTATTTGACTCGCCTGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000508138.5
ENST00000513565.6
ENST00000674620.1
ENST00000674667.1
ENST00000674684.1