RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CENPX (Homo sapiens)

Ensembl gene IDs: ENSG00000169689

Ensembl transcript IDs: ENST00000306704.10, ENST00000392359.8, ENST00000577379.5, ENST00000579520.5, ENST00000580090.5, ENST00000580435.5, ENST00000583767.1, ENST00000584347.1, ENST00000584514.5, ENST00000584600.5, ENST00000585091.1

Found 252 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCTCCTCTGGGGGTGGCCTCAGCCACG +
Preference number: 1 (lower is better)
Translates to: GPSLPLIRGRWKHKA*FCGPGAPLGVASAT
Trigger: CGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR GCA 90 bp CCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGACTCCCAGA +
Preference number: 1 (lower is better)
Translates to: PFPHQCPHWTLQGPQ*TAVLPLLHRLETPR
Trigger: TCTGGGAGTCTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR GCA 90 bp ACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTaGACAGGCTGGAGACTCCCAGAGATCTTGTTTGAATCAACTCCA +
Preference number: 1 (lower is better)
Translates to: TGHSKARSALQSCPF*TGWRLPEILFESTP
Trigger: TGGAGTTGATTCAAACAAGATCTCTGGGAGTCTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 2 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 2 (lower is better)
Translates to: APSHTSVPTGHSKARSALDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 2 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 2 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: PSHTSVPTGHSKARSALQGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VPTGHSKARSALQSCPFCQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAGGCCCGCAGTGCACTaGAGTCCTGCCCCTTCTGCA +
Preference number: 2 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGRPAVH*SPAPSA
Trigger: TGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCT...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PSHTSVPTGHSKARSALQQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 2 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 2 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGCACCAGTGTCCCCACTaGACACTCCAAGGCCCGCAG +
Preference number: 2 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEHQCPH*TLQGPQ
Trigger: CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: APSHTSVPTGHSKARSALWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 2 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
3UTR-3UTR GCA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLEWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR GCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PSHTSVPTGHSKARSALQWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCLIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: HTSVPTGHSKARSALQSCLIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLLIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: PSHTSVPTGHSKARSALQLIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 2 (lower is better)
Translates to: HLPVGPRVACTLLSQGGELIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR TCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR TCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: APSHTSVPTGHSKARSALPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR TCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: PSHTSVPTGHSKARSALQPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR-3UTR TCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 2 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR GCA 72 bp CACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAG +
Preference number: 3 (lower is better)
Translates to: HQCPHWTLQGPQ*TAVLPLLHRLE
Trigger: CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR GCA 72 bp CTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCTCCTCTGGGGGTGGCC +
Preference number: 3 (lower is better)
Translates to: LPLIRGRWKHKA*FCGPGAPLGVA
Trigger: GGCCACCCCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
3UTR GCA 72 bp ACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGGAGACTCCCAGAGATC +
Preference number: 3 (lower is better)
Translates to: TGHSKARSALQS*PFCTGWRLPEI
Trigger: GATCTCTGGGAGTCTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHSASSA*ACRTPR
Trigger: CCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCT...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCSASSA*ACRTPR
Trigger: CCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCT...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALSASSA*ACRTPR
Trigger: CCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCTERVF*LGLPHA
Trigger: GGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGT...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCTERVF*LGLPHA
Trigger: GGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGT...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHTERVF*LGLPHA
Trigger: GGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGT...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCSASSA*ACRTPR
Trigger: CCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCT...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCSSAWA*RTPRTA
Trigger: AGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGA...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGTERVF*LGLPHA
Trigger: GGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGT...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGG +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGESASSA*ACRTPR
Trigger: CCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCT...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTTGCCCGGAGGGAGCGTaGGCCCTGGGCTCACCCACA +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTCPEGA*ALGSPT
Trigger: TGTGGGTGAGCCCAGGGCCCACGCTCCCTCCGGGCA...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584347.1
CDS-3UTR TCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACTCAGCAACTCCACCATaGGCTGCAGCGCGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHSATPP*AAARPR
Trigger: GCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGA...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCGCCGGATCCAGCTCCTaGTCCCTCCATGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCAGSSS*SLHDRS
Trigger: GCTGCGGTCATGGAGGGAGCAGGAGCTGGATCCGGC...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000580435.5
ENST00000584347.1
CDS-3UTR GCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSSSAWA*RTPRTA
Trigger: AGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGA...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLSSAWA*RTPRTA
Trigger: AGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGA...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTSSAWA*RTPRTA
Trigger: AGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGA...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGSSAWA*RTPRTA
Trigger: AGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGA...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGGGCTCCTCTGGGGGTaGCCTCAGCCACGGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSGLLWG*PQPRLR
Trigger: TCTCAGCCGTGGCTGAGGCCACCCCCAGAGGAGCCC...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGACCAGGGGCTCCTCTaGGGGTGGCCTCAGCCACGG +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEDQGLL*GWPQPR
Trigger: CCGTGGCTGAGGCCACCCCCAGAGGAGCCCCTGGTC...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCTGCTCACCAGCTCCTaGTTCCCCGCGTGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCLLTSS*FPACRA
Trigger: GGCTCTGCACGCGGGGAACCAGGAGCTGGTGAGCAG...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579520.5
CDS-3UTR TCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTTCAGCAACTCCACCATaGGCTGCAGCGCGTCCCCGC +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSSATPP*AAARPR
Trigger: GCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGA...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCGGATCCAGCTCCTaGTCCCTCCATGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTAGSSS*SLHDRS
Trigger: GCTGCGGTCATGGAGGGAGCAGGAGCTGGATCCGGC...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000580435.5
ENST00000584347.1
CDS-3UTR GCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCGCCGGATCCAGCTCCTaGTCCCTCCATGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCAGSSS*SLHDRS
Trigger: GCTGCGGTCATGGAGGGAGCAGGAGCTGGATCCGGC...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000580435.5
ENST00000584347.1
CDS-3UTR GCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCCCGCAGTGCACTaGAGTCCTGCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHRPAVH*SPAPSA
Trigger: TGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCT...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAGGCCCGCAGTGCACTaGAGTCCTGCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALRPAVH*SPAPSA
Trigger: TGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALLQGPQ*TAVLPL
Trigger: AAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAG...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCCTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCLQGPQ*TAVLPL
Trigger: AAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAG...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCGCACGCCGCGGACTaGTGCTTCCACAACGAAGAC +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALPHAAD*CFHNED
Trigger: GTCTTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGG...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000392359.8
ENST00000584600.5
CDS-3UTR GCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCTCCTGGTTCCCCGCGTaGAGAGCCGGCTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCSWFPA*RAGLVP
Trigger: AGGCACCAAGCCGGCTCTGCACGCGGGGAACCAGGA...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579520.5
CDS-3UTR CCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACCACCAGTGTCCCCACTaGACACTCCAAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHHQCPH*TLQGPQ
Trigger: CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCCGGATCCAGCTCCTaGTCCCTCCATGACCGCAGC +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEAGSSS*SLHDRS
Trigger: GCTGCGGTCATGGAGGGAGCAGGAGCTGGATCCGGC...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000580435.5
ENST00000584347.1
CDS-3UTR GCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCGCAGGTGCAGCAGCCTaGTCACCAGCTCCTTCCGGA +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCAGAAA*SPAPSG
Trigger: TCCGGAAGGAGCTGGTGAGCAGGCTGCTGCACCTGC...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCCCGCACGCCGCGGACTaGTGCTTCTTTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCPHAAD*CFFGLV
Trigger: GACAAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGG...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALSALQS*PFCTGW
Trigger: CCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCSALQS*PFCTGW
Trigger: CCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACT...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCSALQS*PFCTGW
Trigger: CCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACT...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTAGGCCCGCAGTGCACTaGAGTCCTGCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSRPAVH*SPAPSA
Trigger: TGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCT...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTAGGCCCGCAGTGCACTaGAGTCCTGCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTRPAVH*SPAPSA
Trigger: TGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCT...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTCTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSLQGPQ*TAVLPL
Trigger: AAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAG...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLLQGPQ*TAVLPL
Trigger: AAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAG...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCLQGPQ*TAVLPL
Trigger: AAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAG...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGGACCCCGGGTGGCATaGACACTATTGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHGPRVA*TLLSQG
Trigger: TCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCC...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCGGACCCCGGGTGGCATaGACACTATTGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCGPRVA*TLLSQG
Trigger: TCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCC...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGGGACCCCGGGTGGCATaGACACTATTGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALGPRVA*TLLSQG
Trigger: TCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCC...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACT +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALNSTMS*SASPLT
Trigger: AGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAGCACCTTCTCCAGCTaGTCCACGTCCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALSTFSS*STSTRS
Trigger: GCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR CCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCACCAGTGTCCCCACTaGACACTCCAAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCHQCPH*TLQGPQ
Trigger: CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTCACCAGTGTCCCCACTaGACACTCCAAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTHQCPH*TLQGPQ
Trigger: CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGCACCAGTGTCCCCACTaGACACTCCAAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PSHTSVPTGHSKARSALQHQCPH*TLQGPQ
Trigger: CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTCACCAGTGTCCCCACTaGACACTCCAAGGCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSHQCPH*TLQGPQ
Trigger: CTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTG...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAGGGAGCGTGGGCCCTaGGCTCACCCACAACGAAGA +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGRERGP*AHPQRR
Trigger: TCTTCGTTGTGGGTGAGCCCAGGGCCCACGCTCCCT...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584347.1
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCTCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCSLKCR*SSLLTS
Trigger: GCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGA...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACTCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHSLKCR*SSLLTS
Trigger: GCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGA...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGTCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALSLKCR*SSLLTS
Trigger: GCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGA...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCC +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFTERVF*LGLPHA
Trigger: GGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGT...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAAGTCCAGGAGCAGCTaGGGAAGCACCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCKSRSS*GSTFSS
Trigger: GCTGGAGAAGGTGCTTCCGCAGCTGCTCCTGGACTT...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGSALQS*PFCTGW
Trigger: CCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACT...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLESALQS*PFCTGW
Trigger: CCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACT...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGAGTGCACTGCAGTCCTaGCCCTTCTGCACAGGCTGG +
Preference number: 4 (lower is better)
Translates to: PSHTSVPTGHSKARSALQSALQS*PFCTGW
Trigger: CCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACT...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGAGGCCCGCAGTGCACTaGAGTCCTGCCCCTTCTGCA +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGERPAVH*SPAPSA
Trigger: TGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCT...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGGGACCCCGGGTGGCATaGACACTATTGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLEGPRVA*TLLSQG
Trigger: TCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCC...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAACACACAGGCTACCTaGTGGCCAGGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALNTQAT*WPGLSQ
Trigger: CTGGGAAAGGCCTGGCCAGCAGGTAGCCTGTGTGTT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACT +
Preference number: 4 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLNSTMS*SASPLT
Trigger: AGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTT...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACT +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTNSTMS*SASPLT
Trigger: AGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTT...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGCCGCACGCCGCGGACTaGTGCTTCCACAACGAAGAC +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEPHAAD*CFHNED
Trigger: GTCTTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGG...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000392359.8
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGCAAAATTCCGGATaGTGTGCCCGGAGGGAGCGT +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCTQNSG*CARRER
Trigger: ACGCTCCCTCCGGGCACAGCATCCGGAATTTTGCGT...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000584347.1
CDS-3UTR CCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGAGCACCTTCTCCAGCTaGTCCACGTCCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: PSHTSVPTGHSKARSALQSTFSS*STSTRS
Trigger: GCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCT...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR CCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTAGCACCTTCTCCAGCTaGTCCACGTCCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSSTFSS*STSTRS
Trigger: GCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCT...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR CCA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGAGCACCTTCTCCAGCTaGTCCACGTCCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLESTFSS*STSTRS
Trigger: GCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCT...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTAGGAGCTTCTCCAGCTaGTCCACGTCCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTRSFSS*STSTRS
Trigger: GCTCCGTGTGGACGTGGACCAGCTGGAGAAGCTCCT...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000580435.5
ENST00000584600.5
CDS-3UTR TCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCTGGTCTTGTCATCCTTaGAGTGCAGGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCWSCHP*SAGAAA
Trigger: GGCTGCTGCACCTGCACTTCAAGGATGACAAGACCA...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR TCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGTGGTCTTGTCATCCTTaGAGTGCAGGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALWSCHP*SAGAAA
Trigger: GGCTGCTGCACCTGCACTTCAAGGATGACAAGACCA...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR TCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACTGGTCTTGTCATCCTTaGAGTGCAGGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHWSCHP*SAGAAA
Trigger: GGCTGCTGCACCTGCACTTCAAGGATGACAAGACCA...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCTCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGSLKCR*SSLLTS
Trigger: GCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGA...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTTCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGC +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSSLKCR*SSLLTS
Trigger: GCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGA...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCT +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFSSAWA*RTPRTA
Trigger: AGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGA...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTAAGTCCAGGAGCAGCTaGGGAAGCACCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTKSRSS*GSTFSS
Trigger: GCTGGAGAAGGTGCTTCCGCAGCTGCTCCTGGACTT...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTAACACACAGGCTACCTaGTGGCCAGGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTNTQAT*WPGLSQ
Trigger: CTGGGAAAGGCCTGGCCAGCAGGTAGCCTGTGTGTT...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAACACACAGGCTACCTaGTGGCCAGGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGNTQAT*WPGLSQ
Trigger: CTGGGAAAGGCCTGGCCAGCAGGTAGCCTGTGTGTT...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGGGCAGCGCTGCCAGCTaGTGTTTGTCAAACACACAG +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALGSAAS*CLSNTQ
Trigger: CTGTGTGTTTGACAAACAGCAGCTGGCAGCGCTGCC...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCGGCAGCGCTGCCAGCTaGTGTTTGTCAAACACACAG +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCGSAAS*CLSNTQ
Trigger: CTGTGTGTTTGACAAACAGCAGCTGGCAGCGCTGCC...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGGCAGCGCTGCCAGCTaGTGTTTGTCAAACACACAG +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHGSAAS*CLSNTQ
Trigger: CTGTGTGTTTGACAAACAGCAGCTGGCAGCGCTGCC...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGAGGAGCTTCTCCAGCTaGTCCACGTCCACACGGAGC +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGERSFSS*STSTRS
Trigger: GCTCCGTGTGGACGTGGACCAGCTGGAGAAGCTCCT...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000580435.5
ENST00000584600.5
CDS-3UTR TCA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTGGTCTTGTCATCCTTaGAGTGCAGGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: PSHTSVPTGHSKARSALQWSCHP*SAGAAA
Trigger: GGCTGCTGCACCTGCACTTCAAGGATGACAAGACCA...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR TCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTTGGTCTTGTCATCCTTaGAGTGCAGGTGCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSWSCHP*SAGAAA
Trigger: GGCTGCTGCACCTGCACTTCAAGGATGACAAGACCA...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACTTGTCATCCTTGAAGTaGAGGTGCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHLSSLK*RCSSLL
Trigger: GAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAA...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCTTGTCATCCTTGAAGTaGAGGTGCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCLSSLK*RCSSLL
Trigger: GAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAA...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGAAGTCCAGGAGCAGCTaGGGAAGCACCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEKSRSS*GSTFSS
Trigger: GCTGGAGAAGGTGCTTCCGCAGCTGCTCCTGGACTT...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR GCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGAACACACAGGCTACCTaGTGGCCAGGCCTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGENTQAT*WPGLSQ
Trigger: CTGGGAAAGGCCTGGCCAGCAGGTAGCCTGTGTGTT...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCGGCAGCGCTGCCAGCTaGTGTTTGTCAAACACACAG +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGGSAAS*CLSNTQ
Trigger: CTGTGTGTTTGACAAACAGCAGCTGGCAGCGCTGCC...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGGCAGCGCTGCCAGCTaGTGTTTGTCAAACACACAG +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTGSAAS*CLSNTQ
Trigger: CTGTGTGTTTGACAAACAGCAGCTGGCAGCGCTGCC...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCGGAATATCGCATGGCTaGAAAGGTCACACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCGISHG*KGHTPA
Trigger: AGCTGGCGTGTGACCTTTCCAGCCATGCGATATTCC...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGGAATATCGCATGGCTaGAAAGGTCACACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHGISHG*KGHTPA
Trigger: AGCTGGCGTGTGACCTTTCCAGCCATGCGATATTCC...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR CCA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGAAGGGGAATATCGCATaGCTGGAAAGGTCACACGCC +
Preference number: 4 (lower is better)
Translates to: APSHTSVPTGHSKARSALKGNIA*LERSHA
Trigger: GGCGTGTGACCTTTCCAGCCATGCGATATTCCCCTT...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR CCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCAAGGGGAATATCGCATaGCTGGAAAGGTCACACGCC +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCKGNIA*LERSHA
Trigger: GGCGTGTGACCTTTCCAGCCATGCGATATTCCCCTT...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR GCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTTTGTCATCCTTGAAGTaGAGGTGCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSLSSLK*RCSSLL
Trigger: GAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAA...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCTTGTCATCCTTGAAGTaGAGGTGCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCLSSLK*RCSSLL
Trigger: GAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAA...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTTTGTCATCCTTGAAGTaGAGGTGCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTLSSLK*RCSSLL
Trigger: GAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAA...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCCTCCAAGGCCCGCAGTaGACTGCAGTCCTGCCCCTT +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFLQGPQ*TAVLPL
Trigger: AAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAG...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCAAATTCCGGATGCTGTaGCCGGAGGGAGCGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFKFRML*PEGAWA
Trigger: GGCCCACGCTCCCTCCGGGCACAGCATCCGGAATTT...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584347.1
CDS-3UTR CCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCCAAGGCCTGCTTCTGTaGACCAGGGGCTCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFQGLLL*TRGSSG
Trigger: CCCAGAGGAGCCCCTGGTCCACAGAAGCAGGCCTTG...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLELIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCAAGGGGAATATCGCATaGCTGGAAAGGTCACACGCC +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCKGNIA*LERSHA
Trigger: GGCGTGTGACCTTTCCAGCCATGCGATATTCCCCTT...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR CCA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCAAGGGGAATATCGCATaGCTGGAAAGGTCACACGCC +
Preference number: 4 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGKGNIA*LERSHA
Trigger: GGCGTGTGACCTTTCCAGCCATGCGATATTCCCCTT...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCCCGCACGCCGCGGACTaGTGCTTCTTTGGTCTTGTC +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFPHAAD*CFFGLV
Trigger: GACAAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGG...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCGGACCCCGGGTGGCATaGACACTATTGTCCCAGGGA +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFGPRVA*TLLSQG
Trigger: TCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCC...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGGAATATCGCATGGCTaGAAAGGTCACACGCCAGCT +
Preference number: 4 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEGISHG*KGHTPA
Trigger: AGCTGGCGTGTGACCTTTCCAGCCATGCGATATTCC...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCAAGTCCAGGAGCAGCTaGGGAAGCACCTTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFKSRSS*GSTFSS
Trigger: GCTGGAGAAGGTGCTTCCGCAGCTGCTCCTGGACTT...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000584347.1
CDS-3UTR CCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCAAGTTTAGGCCCTTGTaGGAAACGGGAAAACACGTC +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCKFRPL*ETGKHV
Trigger: GACGTGTTTTCCCGTTTCCCACAAGGGCCTAAACTT...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584347.1
CDS-3UTR TCA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: VPTGHSKARSALQSCPFCPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCTGGAAACACAAGGCCTaGTTCTGTGGACCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFWKHKA*FCGPGA
Trigger: AGCCCCTGGTCCACAGAAGCAGGCCTTGTGTTTCCA...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAACAAATTTATAGCCTaGGGAAGCATCTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCNKFIA*GSIFQG
Trigger: CCCTTGGAAGATGCTTCCCCAGGCTATAAATTTGTT...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR CCA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAACAAATTTATAGCCTaGGGAAGCATCTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHNKFIA*GSIFQG
Trigger: CCCTTGGAAGATGCTTCCCCAGGCTATAAATTTGTT...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS-3UTR TCA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR TCA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR TCA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGCCCAGAGATCTTGTTTaGATCAACTCCAAATCCTTC +
Preference number: 4 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLEPRDLV*INSKSF
Trigger: GAAGGATTTGGAGTTGATTCAAACAAGATCTCTGGG...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR GCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCTTGTCATCCTTGAAGTaGAGGTGCAGCAGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFLSSLK*RCSSLL
Trigger: GAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAA...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCCTTATCAGAGGCCGCTaGAAACACAAGGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFLIRGR*KHKACF
Trigger: GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAG...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CCA 90 bp CACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCAACAAATTTATAGCCTaGGGAAGCATCTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: HTSVPTGHSKARSALQSCNKFIA*GSIFQG
Trigger: CCCTTGGAAGATGCTTCCCCAGGCTATAAATTTGTT...GCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584600.5
CDS TCA 90 bp TCACCAGCTCCTTCCGGAAGCCGGATCCAGCTCCTGCTCCCTCCATaGCCGCAGCCTCAACGCGCGCCCACCGGAACCCCGCCCCGCGCC +
Preference number: 5 (lower is better)
Translates to: SPAPSGSRIQLLLPP*PQPQRAPTGTPPRA
Trigger: GGCGCGGGGCGGGGTTCCGGTGGGCGCGCGTTGAGGCTGCGGTCATGGAGGGAGCAGGAGCTGGATCCGGCTTCCGGAAGGAGCTGGTGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000306704.10
CDS GCA 90 bp GCCCTCACAGTGTCACGCGTGAGGTCGGGACGGAGCGTCCGCGCCTaGCTAGCCCCTGCCCTCCGGCCCTCACCTTCCGGAAGCCGGATC +
Preference number: 5 (lower is better)
Translates to: ALTVSRVRSGRSVRA*LAPALRPSPSGSRI
Trigger: GATCCGGCTTCCGGAAGGTGAGGGCCGGAGGGCAGGGGCTAGGCAGGCGCGGACGCTCCGTCCCGACCTCACGCGTGACACTGTGAGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577379.5
ENST00000580090.5
ENST00000583767.1
CDS GCA 90 bp GCCGGGCACCCCCACTTGCGCCCCGACCCACGCTCACGCACCAGCTaGGGAAGCACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCG +
Preference number: 5 (lower is better)
Translates to: AGHPHLRPDPRSRTS*GSTFSSWSTSTRSA
Trigger: CGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTTCCGCAGCTGGTGCGTGAGCGTGGGTCGGGGCGCAAGTGGGGGTGCCCGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577379.5
CDS GCA 90 bp GTCACGCGTGAGGTCGGGACGGAGCGTCCGCGCCTGCCTAGCCCCTaGCCTCCGGCCCTCACCTTCCGGAAGCCGGATCCAGCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: VTREVGTERPRLPSP*PPALTFRKPDPAPA
Trigger: AGCAGGAGCTGGATCCGGCTTCCGGAAGGTGAGGGCCGGAGGGCAGGGGCTAGGCAGGCGCGGACGCTCCGTCCCGACCTCACGCGTGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580090.5
CDS GCA 90 bp GCAGGGGGAGGTTATGCGGGACCCTCACCCACCGCTCTGGCTGGGTaGTCCAGACATACCCCCGCCCTCCCGAGGCCTTGGCCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: AGGGYAGPSPTALAG*SRHTPALPRPWPCR
Trigger: TCTGCAGGGCCAAGGCCTCGGGAGGGCGGGGGTATGTCTGGAGCACCCAGCCAGAGCGGTGGGTGAGGGTCCCGCATAACCTCCCCCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 90 bp CACACGGAGCGCGTCTTCTGCCTGGGCCTGCCGCACGCCGCGGACTaGTGCTTCTGCGGTGAGAAACGCGAGAGGTGGGGGATGCTGGGG +
Preference number: 5 (lower is better)
Translates to: HTERVFCLGLPHAAD*CFCGEKRERWGMLG
Trigger: CCCCAGCATCCCCCACCTCTCGCGTTTCTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 90 bp CAAGGCAGGGGGAGGTTATGCGGGACCCTCACCCACCGCTCTGGCTaGGTGCTCCAGACATACCCCCGCCCTCCCGAGGCCTTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: QGRGRLCGTLTHRSG*VLQTYPRPPEALAL
Trigger: CAGGGCCAAGGCCTCGGGAGGGCGGGGGTATGTCTGGAGCACCCAGCCAGAGCGGTGGGTGAGGGTCCCGCATAACCTCCCCCTGCCTTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 90 bp ACTGCAAGGCAGGGGGAGGTTATGCGGGACCCTCACCCACCGCTCTaGCTGGGTGCTCCAGACATACCCCCGCCCTCCCGAGGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: TARQGEVMRDPHPPL*LGAPDIPPPSRGLG
Trigger: GCCAAGGCCTCGGGAGGGCGGGGGTATGTCTGGAGCACCCAGCCAGAGCGGTGGGTGAGGGTCCCGCATAACCTCCCCCTGCCTTGCAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 90 bp CTCCAGACATACCCCCGCCCTCCCGAGGCCTTGGCCCTGCAGAGTTaGAGGAAAGGGTCCCTGAGGACAGACACGGGGACCCACCTCCCG +
Preference number: 5 (lower is better)
Translates to: LQTYPRPPEALALQS*RKGSLRTDTGTHLP
Trigger: CGGGAGGTGGGTCCCCGTGTCTGTCCTCAGGGACCCTTTCCTGCAACTCTGCAGGGCCAAGGCCTCGGGAGGGCGGGGGTATGTCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 90 bp TCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCTGCGGTGAGAAACGCGAGA +
Preference number: 5 (lower is better)
Translates to: SSWSTSTRSASSAWA*RTPRTAASAVRNAR
Trigger: TCTCGCGTTTCTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 90 bp AAGCACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCCGCGGACTGCTGCTTCTGCGGTGAG +
Preference number: 5 (lower is better)
Translates to: KHLLQLVHVHTERVF*LGLPHAADCCFCGE
Trigger: CTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 90 bp TCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCCACAACGAAGACCTTCAGC +
Preference number: 5 (lower is better)
Translates to: SSWSTSTRSASSAWA*RTPRTAASTTKTFS
Trigger: GCTGAAGGTCTTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000584514.5
ENST00000584600.5
CDS GCA 90 bp TCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCTGACAAACAGGCTCAGGAG +
Preference number: 5 (lower is better)
Translates to: SSWSTSTRSASSAWA*RTPRTAASDKQAQE
Trigger: CTCCTGAGCCTGTTTGTCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1
CDS GCA 90 bp CAGGAGCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCCGCGGACTGCTGCTTCCACAACGAA +
Preference number: 5 (lower is better)
Translates to: QELLQLVHVHTERVF*LGLPHAADCCFHNE
Trigger: TTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGCTCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584600.5
CDS CCA 90 bp ACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCCACAACGAAGACC +
Preference number: 5 (lower is better)
Translates to: TFSSWSTSTRSASSA*ACRTPRTAASTTKT
Trigger: GGTCTTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000584514.5
CDS CCA 90 bp ACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTGCGGTGAGAAAC +
Preference number: 5 (lower is better)
Translates to: TFSSWSTSTRSASSA*ACRTPRTAASAVRN
Trigger: GTTTCTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 90 bp AGCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCCACAACGAAGACC +
Preference number: 5 (lower is better)
Translates to: SFSSWSTSTRSASSA*ACRTPRTAASTTKT
Trigger: GGTCTTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGCT
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584600.5
CDS GCA 90 bp AAGCACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCCGCGGACTGCTGCTTCCACAACGAA +
Preference number: 5 (lower is better)
Translates to: KHLLQLVHVHTERVF*LGLPHAADCCFHNE
Trigger: TTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000584514.5
CDS GCA 90 bp GACCTTCAGCAACTCCACCATGAGCTGCAGCGCGTCCCCGCTCACTaGAAGGCAGGGGGAGGTTATGCGGGACCCTCACCCACCGCTCTG +
Preference number: 5 (lower is better)
Translates to: DLQQLHHELQRVPAH*KAGGGYAGPSPTAL
Trigger: CAGAGCGGTGGGTGAGGGTCCCGCATAACCTCCCCCTGCCTTGCAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 90 bp CAGGAGCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCCGCGGACTGCTGCTTCTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: QELLQLVHVHTERVF*LGLPHAADCCFFGL
Trigger: AAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580435.5
CDS CCA 90 bp CGGACTGCTGCTTCTGCGGTGAGAAACGCGAGAGGTGGGGGATGCTaGGGGGATCTTAAACCCGAGCCCAGTGAGGGCCTCAGCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RTAASAVRNARGGGC*GDLKPEPSEGLSLG
Trigger: GCCCAGGCTGAGGCCCTCACTGGGCTCGGGTTTAAGATCCCCCCAGCATCCCCCACCTCTCGCGTTTCTCACCGCAGAAGCAGCAGTCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 90 bp ACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTGACAAACAGGCT +
Preference number: 5 (lower is better)
Translates to: TFSSWSTSTRSASSA*ACRTPRTAASDKQA
Trigger: AGCCTGTTTGTCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1
CDS GCA 90 bp TCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCTTTGGTCTTGTCATCCTTG +
Preference number: 5 (lower is better)
Translates to: SSWSTSTRSASSAWA*RTPRTAASLVLSSL
Trigger: CAAGGATGACAAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580090.5
ENST00000580435.5
CDS GCA 90 bp AAGCACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCCGCGGACTGCTGCTTCTTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: KHLLQLVHVHTERVF*LGLPHAADCCFFGL
Trigger: AAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580090.5
CDS CCA 90 bp ACCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: TFSSWSTSTRSASSA*ACRTPRTAASLVLS
Trigger: TGACAAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580090.5
CDS CCA 90 bp AGCTTCTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTTTGGTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SFSSWSTSTRSASSA*ACRTPRTAASLVLS
Trigger: TGACAAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580435.5
CDS GCA 90 bp CTGGGCTCACCCACAACGAAGACCTTCAGCAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACTGCAAGGCAGGGGGAGGTTATGCGG +
Preference number: 5 (lower is better)
Translates to: LGSPTTKTFSNSTMS*SASPLTARQGEVMR
Trigger: CCGCATAACCTCCCCCTGCCTTGCAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGGTGAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS-3UTR CAA 90 bp CCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCGTGGCATGCACACTATaGTCCCAGGGAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PLPTPVSPLDTPRPAVHCVACTL*SQGGEA
Trigger: TGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCAC...GCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGGTGGCATGCACACTATaGTCCCAGGGAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: APSHTSVPTGHSKARSALVACTL*SQGGEA
Trigger: TGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCAC...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS GCA 90 bp AGCGCGTCCCCGCTCACTTTGGTCTTGTCATCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGCTCCAGCTGCGAGACACCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: SASPLTLVLSSLKCR*SSLLTSSSCETPAH
Trigger: GTGGGCTGGTGTCTCGCAGCTGGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGTGAGCGGGGACGCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577379.5
ENST00000583767.1
ENST00000584514.5
CDS-3UTR CAA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCGTGGCATGCACACTATaGTCCCAGGGAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGVACTL*SQGGEA
Trigger: TGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCAC...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACGCGTCCCCGCTCACTTaGGTCTTGTCATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHASPLT*VLSSLK
Trigger: CTTCAAGGATGACAAGACCAAAGTGAGCGGGGACGC...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS GCA 90 bp CCGCGGACTGCTGCTTCTTTGGTCTTGTCATCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGCTCCAGCTGCGAGACACCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: PRTAASLVLSSLKCR*SSLLTSSSCETPAH
Trigger: GTGGGCTGGTGTCTCGCAGCTGGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGAAGCAGCAGTCCGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580090.5
CDS CCA 90 bp CGCTGGAAAAACGCAAAATTCCGGATGCTGTGCCCGGAGGGAGCGTaGGCCCTGGGCTCACCCACAACGAAGACCTTCAGCAACTCCACC +
Preference number: 5 (lower is better)
Translates to: RWKNAKFRMLCPEGA*ALGSPTTKTFSNST
Trigger: GGTGGAGTTGCTGAAGGTCTTCGTTGTGGGTGAGCCCAGGGCCCACGCTCCCTCCGGGCACAGCATCCGGAATTTTGCGTTTTTCCAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000583767.1
ENST00000584347.1
ENST00000585091.1
CDS-3UTR CAA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: APSHTSVPTGHSKARSALLVLSS*KCRCSS
Trigger: GCTGCTGCACCTGCACTTCAAGGATGACAAGACCAA...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGTGGCATGCACACTATaGTCCCAGGGAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: HLPVGPRVACTLLSQGGEVACTL*SQGGEA
Trigger: TGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCAC...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp GCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCCGCTCACTTTGGTCTaGTCATCCTTGAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: APSHTSVPTGHSKARSALPLTLV*SSLKCR
Trigger: CCTGCACTTCAAGGATGACAAGACCAAAGTGAGCGG...CAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp CCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACCCGCTCACTTTGGTCTaGTCATCCTTGAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PHWTLQGPQCTAVLPLLHPLTLV*SSLKCR
Trigger: CCTGCACTTCAAGGATGACAAGACCAAAGTGAGCGG...GTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCGTCCCCGCTCACTTaGGTCTTGTCATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSASPLT*VLSSLK
Trigger: CTTCAAGGATGACAAGACCAAAGTGAGCGGGGACGC...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLELVLSS*KCRCSS
Trigger: GCTGCTGCACCTGCACTTCAAGGATGACAAGACCAA...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp TGCCCCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: CPFPHQCPHWTLQGPQCTLVLSS*KCRCSS
Trigger: GCTGCTGCACCTGCACTTCAAGGATGACAAGACCAA...AGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp GTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: VSPLDTPRPAVHCSPAPSLVLSS*KCRCSS
Trigger: GCTGCTGCACCTGCACTTCAAGGATGACAAGACCAA...AGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp GTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCCGGACTGCTGCTTCTTaGGTCTTGTCATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: VPTGHSKARSALQSCPFCRTAAS*VLSSLK
Trigger: CTTCAAGGATGACAAGACCAAAGAAGCAGCAGTCCG...GCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS-3UTR CAA 90 bp CCTTCCCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGCCGCTCACTTTGGTCTaGTCATCCTTGAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PSHTSVPTGHSKARSALQPLTLV*SSLKCR
Trigger: CCTGCACTTCAAGGATGACAAGACCAAAGTGAGCGG...CTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGGGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000392359.8
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp CCACACCAGTGTCCCCACTGGACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCAAGTTTAGGCCCTaGTGGGAAACGGGAAAACAC +
Preference number: 5 (lower is better)
Translates to: PHQCPHWTLQGPQCTAVLPKFRP*WETGKH
Trigger: GTGTTTTCCCGTTTCCCACAAGGGCCTAAACTTGGG...CAGGACTGCAGTGCACTGCGGGCCTTGGAGTGTCCAGTGGGGACACTGGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584347.1
CDS-3UTR CAA 90 bp CACCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: HLPVGPRVACTLLSQGGELVLSS*KCRCSS
Trigger: GCTGCTGCACCTGCACTTCAAGGATGACAAGACCAA...CTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCGCTGCTTCTTTGGTCTaGTCATCCTTGAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGAASLV*SSLKCR
Trigger: CCTGCACTTCAAGGATGACAAGACCAAAGAAGCAGC...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS-3UTR CAA 90 bp ACACTCCAAGGCCCGCAGTGCACTGCAGTCCTGCCCCTTCTGCACAGGCTGGAGGCTGCTTCTTTGGTCTaGTCATCCTTGAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: TLQGPQCTAVLPLLHRLEAASLV*SSLKCR
Trigger: CCTGCACTTCAAGGATGACAAGACCAAAGAAGCAGC...CTCCAGCCTGTGCAGAAGGGGCAGGACTGCAGTGCACTGCGGGCCTTGGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS-3UTR CAA 90 bp CCTGCCTGTAGGACCCCGGGTGGCATGCACACTATTGTCCCAGGGAGGAGAGGCCGGACTGCTGCTTCTTaGGTCTTGTCATCCTTGAAG +
Preference number: 5 (lower is better)
Translates to: PACRTPGGMHTIVPGRRGRTAAS*VLSSLK
Trigger: CTTCAAGGATGACAAGACCAAAGAAGCAGCAGTCCG...GCCTCTCCTCCCTGGGACAATAGTGTGCATGCCACCCGGGGTCCTACAGGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS-3UTR CAA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCGTGGCATGCACACTATaGTCCCAGGGAGGAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFVACTL*SQGGEA
Trigger: TGCCTCTCCTCCCTGGGACAATAGTGTGCATGCCAC...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580435.5
ENST00000584347.1
ENST00000584600.5
CDS-3UTR CAA 90 bp TCAGGTCCTTCCCTGCCTCTTATCAGAGGCCGCTGGAAACACAAGGCCTGCTTCGCTGCTTCTTTGGTCTaGTCATCCTTGAAGTGCAGG +
Preference number: 5 (lower is better)
Translates to: SGPSLPLIRGRWKHKACFAASLV*SSLKCR
Trigger: CCTGCACTTCAAGGATGACAAGACCAAAGAAGCAGC...GAAGCAGGCCTTGTGTTTCCAGCGGCCTCTGATAAGAGGCAGGGAAGGACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580435.5
CDS GCA 72 bp GAGGTCGGGACGGAGCGTCCGCGCCTGCCTAGCCCCTaGCCTCCGGCCCTCACCTTCCGGAAGCCGGATCCA +
Preference number: 6 (lower is better)
Translates to: EVGTERPRLPSP*PPALTFRKPDP
Trigger: TGGATCCGGCTTCCGGAAGGTGAGGGCCGGAGGGCAGGGGCTAGGCAGGCGCGGACGCTCCGTCCCGACCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000577379.5
ENST00000580090.5
ENST00000583767.1
CDS CCA 72 bp GCCCAACCTCAAAGGCACAGGGGGCGGCGCGGGGGCTaGCGTCTGGCCCTCACAGTGTCACGCGTGAGGTCG +
Preference number: 6 (lower is better)
Translates to: AQPQRHRGRRGG*RLALTVSRVRS
Trigger: CGACCTCACGCGTGACACTGTGAGGGCCAGACGCCAGCCCCCGCGCCGCCCCCTGTGCCTTTGAGGTTGGGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000577379.5
ENST00000580090.5
ENST00000583767.1
ENST00000584514.5
CDS GCA 72 bp CTCCAGCTGGTCCACGTCCACACGGAGCGCGTCTTCTaGCTGGGCCTGCCGCACGCCGCGGACTGCTGCTTC +
Preference number: 6 (lower is better)
Translates to: LQLVHVHTERVF*LGLPHAADCCF
Trigger: GAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000577379.5
ENST00000579520.5
ENST00000580090.5
ENST00000580435.5
ENST00000583767.1
ENST00000584347.1
ENST00000584514.5
ENST00000584600.5
ENST00000585091.1
CDS GCA 72 bp GAAGCACTTAGGGCCAGCCAGCCGGGCACCCCCACTTaGGCCCCGACCCACGCTCACGCACCAGCTGCGGAA +
Preference number: 6 (lower is better)
Translates to: EALRASQPGTPT*APTHAHAPAAE
Trigger: TTCCGCAGCTGGTGCGTGAGCGTGGGTCGGGGCGCAAGTGGGGGTGCCCGGCTGGCTGGCCCTAAGTGCTTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577379.5
CDS GCA 72 bp CGCGTCTTCTGCCTGGGCCTGCCGCACGCCGCGGACTaGTGCTTCTGCGGTGAGAAACGCGAGAGGTGGGGG +
Preference number: 6 (lower is better)
Translates to: RVFCLGLPHAAD*CFCGEKRERWG
Trigger: CCCCCACCTCTCGCGTTTCTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 72 bp AGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTGCG +
Preference number: 6 (lower is better)
Translates to: SWSTSTRSASSA*ACRTPRTAASA
Trigger: CGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCT
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 72 bp GGTTATGCGGGACCCTCACCCACCGCTCTGGCTGGGTaGTCCAGACATACCCCCGCCCTCCCGAGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: GYAGPSPTALAG*SRHTPALPRPW
Trigger: CCAAGGCCTCGGGAGGGCGGGGGTATGTCTGGAGCACCCAGCCAGAGCGGTGGGTGAGGGTCCCGCATAACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 72 bp TCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCTGCGGTGAGA +
Preference number: 6 (lower is better)
Translates to: STSTRSASSAWA*RTPRTAASAVR
Trigger: TCTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 72 bp CAGGGGGAGGTTATGCGGGACCCTCACCCACCGCTCTaGCTGGGTGCTCCAGACATACCCCCGCCCTCCCGA +
Preference number: 6 (lower is better)
Translates to: QGEVMRDPHPPL*LGAPDIPPPSR
Trigger: TCGGGAGGGCGGGGGTATGTCTGGAGCACCCAGCCAGAGCGGTGGGTGAGGGTCCCGCATAACCTCCCCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 72 bp AGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTGAC +
Preference number: 6 (lower is better)
Translates to: SWSTSTRSASSA*ACRTPRTAASD
Trigger: GTCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1
CDS GCA 72 bp GCTCACCAGCTCCTTCCGGAAGCCGGATCCAGCTCCTaGTCCCTCCATGACCGCAGCCTCAACGCGCGCCCA +
Preference number: 6 (lower is better)
Translates to: AHQLLPEAGSSS*SLHDRSLNARP
Trigger: TGGGCGCGCGTTGAGGCTGCGGTCATGGAGGGAGCAGGAGCTGGATCCGGCTTCCGGAAGGAGCTGGTGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000306704.10
ENST00000580435.5
CDS GCA 72 bp TCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCCACAACGAAG +
Preference number: 6 (lower is better)
Translates to: STSTRSASSAWA*RTPRTAASTTK
Trigger: CTTCGTTGTGGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000584514.5
ENST00000584600.5
CDS GCA 72 bp GTCTTCTGCCTGGGCCTGCCGCACGCCGCGGACTGCTaGTTCTGCGGTGAGAAACGCGAGAGGTGGGGGATG +
Preference number: 6 (lower is better)
Translates to: VFCLGLPHAADC*FCGEKRERWGM
Trigger: CATCCCCCACCTCTCGCGTTTCTCACCGCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 72 bp AGCTGGTCCACGTCCACACGGAGCGCGTCTTCTGCCTaGGCCTGCCGCACGCCGCGGACTGCTGCTTCTTTG +
Preference number: 6 (lower is better)
Translates to: SWSTSTRSASSA*ACRTPRTAASL
Trigger: CAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580090.5
ENST00000580435.5
CDS GCA 72 bp TCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCTTTGGTCTTG +
Preference number: 6 (lower is better)
Translates to: STSTRSASSAWA*RTPRTAASLVL
Trigger: CAAGACCAAAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580090.5
ENST00000580435.5
CDS GCA 72 bp CAACTCCACCATGAGCTGCAGCGCGTCCCCGCTCACTaGAAGGCAGGGGGAGGTTATGCGGGACCCTCACCC +
Preference number: 6 (lower is better)
Translates to: QLHHELQRVPAH*KAGGGYAGPSP
Trigger: GGGTGAGGGTCCCGCATAACCTCCCCCTGCCTTGCAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 72 bp TCCACGTCCACACGGAGCGCGTCTTCTGCCTGGGCCTaGCGCACGCCGCGGACTGCTGCTTCTGACAAACAG +
Preference number: 6 (lower is better)
Translates to: STSTRSASSAWA*RTPRTAASDKQ
Trigger: CTGTTTGTCAGAAGCAGCAGTCCGCGGCGTGCGGCAGGCCCAGGCAGAAGACGCGCTCCGTGTGGACGTGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1
CDS CAA 90 bp CACCTCCCGCCCGCACCCCCACCCGCACCTTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGCCTGCTCACCAGCTCCTTCCGGAAG +
Preference number: 6 (lower is better)
Translates to: HLPPAPPPAPLVLSS*KCRCSSLLTSSFRK
Trigger: CTTCCGGAAGGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGGTGCGGGTGGGGGTGCGGGCGGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS GCA 72 bp CCCACAACGAAGACCTTCAGCAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACTGCAAGGCAGGGGGAG +
Preference number: 6 (lower is better)
Translates to: PTTKTFSNSTMS*SASPLTARQGE
Trigger: CTCCCCCTGCCTTGCAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 72 bp AAGTCCAGGAGCAGCTGCGGAAGCACCTTCTCCAGCTaGTCCACGTCCACACGGAGCGCGTCTTCTGCCTGG +
Preference number: 6 (lower is better)
Translates to: KSRSSCGSTFSS*STSTRSASSAW
Trigger: CCAGGCAGAAGACGCGCTCCGTGTGGACGTGGACCAGCTGGAGAAGGTGCTTCCGCAGCTGCTCCTGGACTT
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000306704.10
ENST00000392359.8
ENST00000579520.5
ENST00000580090.5
ENST00000583767.1
ENST00000584347.1
ENST00000584514.5
ENST00000585091.1
CDS CCA 72 bp GCTTCTGCGGTGAGAAACGCGAGAGGTGGGGGATGCTaGGGGGATCTTAAACCCGAGCCCAGTGAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: ASAVRNARGGGC*GDLKPEPSEGL
Trigger: GAGGCCCTCACTGGGCTCGGGTTTAAGATCCCCCCAGCATCCCCCACCTCTCGCGTTTCTCACCGCAGAAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CAA 72 bp CCCGCACCCCCACCCGCACCTTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGCCTGCTCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: PAPPPAPLVLSS*KCRCSSLLTSS
Trigger: GGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGGTGCGGGTGGGGGTGCGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS TCA 72 bp GCTCACCCACAACGAAGACCTTCAGCAACTCCACCATaGGCTGCAGCGCGTCCCCGCTCACTGCAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: AHPQRRPSATPP*AAARPRSLQGR
Trigger: CCTGCCTTGCAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGGTGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CCA 72 bp AATTCCGGATGCTGTGCCCGGAGGGAGCGTGGGCCCTaGGCTCACCCACAACGAAGACCTTCAGCAACTCCA +
Preference number: 6 (lower is better)
Translates to: NSGCCARRERGP*AHPQRRPSATP
Trigger: TGGAGTTGCTGAAGGTCTTCGTTGTGGGTGAGCCCAGGGCCCACGCTCCCTCCGGGCACAGCATCCGGAATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000583767.1
ENST00000584347.1
ENST00000585091.1
CDS CCA 72 bp AACGCAAAATTCCGGATGCTGTGCCCGGAGGGAGCGTaGGCCCTGGGCTCACCCACAACGAAGACCTTCAGC +
Preference number: 6 (lower is better)
Translates to: NAKFRMLCPEGA*ALGSPTTKTFS
Trigger: GCTGAAGGTCTTCGTTGTGGGTGAGCCCAGGGCCCACGCTCCCTCCGGGCACAGCATCCGGAATTTTGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000583767.1
ENST00000584347.1
ENST00000585091.1
CDS CAA 72 bp TGCAGCGCGTCCCCGCTCACTTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGCCTGCTCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: CSASPLTLVLSS*KCRCSSLLTSS
Trigger: GGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGTGAGCGGGGACGCGCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000583767.1
ENST00000584347.1
ENST00000584514.5
ENST00000584600.5
CDS CAA 72 bp ACGCCGCGGACTGCTGCTTCTTTGGTCTTGTCATCCTaGAAGTGCAGGTGCAGCAGCCTGCTCACCAGCTCC +
Preference number: 6 (lower is better)
Translates to: TPRTAASLVLSS*KCRCSSLLTSS
Trigger: GGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGAAGCAGCAGTCCGCGGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000306704.10
ENST00000579520.5
ENST00000580090.5
ENST00000580435.5
CDS TCA 72 bp GCTCACCCACAACGAAGACCTTCAGCAACTCCACCATaGGCTGCAGCGCGTCCCCGCTCACTTTGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: AHPQRRPSATPP*AAARPRSLWSC
Trigger: ACAAGACCAAAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGGTGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1
CDS GCA 72 bp CCGCTCACTTTGGTCTTGTCATCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGCTCCAGCTGCGAGACA +
Preference number: 6 (lower is better)
Translates to: PLTLVLSSLKCR*SSLLTSSSCET
Trigger: TGTCTCGCAGCTGGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGTGAGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000577379.5
ENST00000583767.1
ENST00000584514.5
CDS GCA 72 bp CCCACAACGAAGACCTTCAGCAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACTTTGGTCTTGTCATCC +
Preference number: 6 (lower is better)
Translates to: PTTKTFSNSTMS*SASPLTLVLSS
Trigger: GGATGACAAGACCAAAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1
CDS TCA 72 bp CTGCTTCCACAACGAAGACCTTCAGCAACTCCACCATaGGCTGCAGCGCGTCCCCGCTCACTTTGGTCTTGT +
Preference number: 6 (lower is better)
Translates to: LLPQRRPSATPP*AAARPRSLWSC
Trigger: ACAAGACCAAAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGAAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000584514.5
ENST00000584600.5
CDS GCA 72 bp TCCACAACGAAGACCTTCAGCAACTCCACCATGAGCTaGAGCGCGTCCCCGCTCACTTTGGTCTTGTCATCC +
Preference number: 6 (lower is better)
Translates to: STTKTFSNSTMS*SASPLTLVLSS
Trigger: GGATGACAAGACCAAAGTGAGCGGGGACGCGCTGCAGCTCATGGTGGAGTTGCTGAAGGTCTTCGTTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000392359.8
ENST00000577379.5
ENST00000584514.5
ENST00000584600.5
CDS GCA 72 bp GCTGCTTCTTTGGTCTTGTCATCCTTGAAGTGCAGGTaGAGCAGCCTGCTCACCAGCTCCAGCTGCGAGACA +
Preference number: 6 (lower is better)
Translates to: AASLVLSSLKCR*SSLLTSSSCET
Trigger: TGTCTCGCAGCTGGAGCTGGTGAGCAGGCTGCTGCACCTGCACTTCAAGGATGACAAGACCAAAGAAGCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000580090.5
CDS CCA 72 bp ACAAACAGGCTCAGGAGACCCAAGTTTAGGCCCTTGTaGGAAACGGGAAAACACGTCTTGGTTTTCCCGCTG +
Preference number: 6 (lower is better)
Translates to: TNRLRRPKFRPL*ETGKHVLVFPL
Trigger: CAGCGGGAAAACCAAGACGTGTTTTCCCGTTTCCCACAAGGGCCTAAACTTGGGTCTCCTGAGCCTGTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583767.1
ENST00000584347.1
ENST00000585091.1
CDS CAA 72 bp CTGACAAACAGGCTCAGGAGACCCAAGTTTAGGCCCTaGTGGGAAACGGGAAAACACGTCTTGGTTTTCCCG +
Preference number: 6 (lower is better)
Translates to: LTNRLRRPKFRP*WETGKHVLVFP
Trigger: CGGGAAAACCAAGACGTGTTTTCCCGTTTCCCACAAGGGCCTAAACTTGGGTCTCCTGAGCCTGTTTGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000583767.1
ENST00000584347.1
ENST00000585091.1
CDS CAA 90 bp CCACAGCACCTGACAAACAGGCTCAGGAGACCCAAGTTTAGGCCCTaGTGGGAAACGGGAAAACACGTCTTGGTTTTCCCGCTGGAAAAA +
Preference number: 6 (lower is better)
Translates to: PQHLTNRLRRPKFRP*WETGKHVLVFPLEK
Trigger: TTTTTCCAGCGGGAAAACCAAGACGTGTTTTCCCGTTTCCCACAAGGGCCTAAACTTGGGTCTCCTGAGCCTGTTTGTCAGGTGCTGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585091.1
CDS CAA 90 bp CTGCTGCTTCTGACAAACAGGCTCAGGAGACCCAAGTTTAGGCCCTaGTGGGAAACGGGAAAACACGTCTTGGTTTTCCCGCTGGAAAAA +
Preference number: 6 (lower is better)
Translates to: LLLLTNRLRRPKFRP*WETGKHVLVFPLEK
Trigger: TTTTTCCAGCGGGAAAACCAAGACGTGTTTTCCCGTTTCCCACAAGGGCCTAAACTTGGGTCTCCTGAGCCTGTTTGTCAGAAGCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000583767.1
ENST00000584347.1