Pregenerated sensors for CENPW (Homo sapiens)
Ensembl gene IDs: ENSG00000203760Ensembl transcript IDs: ENST00000368325.5, ENST00000368326.5, ENST00000368328.5
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCGCCATCCTCTCTGTCAAGTACCAGCTGCCTCAGCTTCCGAGGTaGTCTCTGTATCGCACACAAGCTCCGGGGACACTGGGCCAGCGA | + |
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Preference number: 5 (lower is better) Translates to: SAILSVKYQLPQLPR*SLYRTQAPGTLGQR Trigger: TCGCTGGCCCAGTGTCCCCGGAGCTTGTGTGCGATACAGAGAGCACCTCGGAAGCTGAGGCAGCTGGTACTTGACAGAGAGGATGGCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS GCA 90 bp | GGGAGACTATGGTCGACAGCGCCATCCTCTCTGTCAAGTACCAGCTaGCTCAGCTTCCGAGGTGCTCTCTGTATCGCACACAAGCTCCGG | + |
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Preference number: 5 (lower is better) Translates to: GRLWSTAPSSLSSTS*LSFRGALCIAHKLR Trigger: CCGGAGCTTGTGTGCGATACAGAGAGCACCTCGGAAGCTGAGGCAGCTGGTACTTGACAGAGAGGATGGCGCTGTCGACCATAGTCTCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS CCA 90 bp | AGCTTCCGAGGTGCTCTCTGTATCGCACACAAGCTCCGGGGACACTaGGCCAGCGAAAACAATCCGGTCCGTATGACGCTTCTTCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: SFRGALCIAHKLRGH*ASENNPVRMTLLQA Trigger: TGCCTGAAGAAGCGTCATACGGACCGGATTGTTTTCGCTGGCCCAGTGTCCCCGGAGCTTGTGTGCGATACAGAGAGCACCTCGGAAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368328.5 |
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| CDS GCA 90 bp | TTGAAGACTCGCTTTAGAAAGCCACGGGGAGCCTTCCGCTTTATCTaGTTCCTCTGGGAGACTATGGTCGACAGCGCCATCCTCTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: LKTRFRKPRGAFRFI*FLWETMVDSAILSV Trigger: GACAGAGAGGATGGCGCTGTCGACCATAGTCTCCCAGAGGAAGCAGATAAAGCGGAAGGCTCCCCGTGGCTTTCTAAAGCGAGTCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS TCA 90 bp | ATAAGTCACCACTTTTCTCCAGACGAAGTTGAGGCTTCTTTCGCTTaGAGACTCGCTTTAGAAAGCCACGGGGAGCCTTCCGCTTTATCT | + |
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Preference number: 5 (lower is better) Translates to: ISHHFSPDEVEASFA*RLALESHGEPSALS Trigger: AGATAAAGCGGAAGGCTCCCCGTGGCTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS TCA 90 bp | TGTCCTGGACTCTTCAATAAGTCACCACTTTTCTCCAGACGAAGTTaGGGCTTCTTTCGCTTGAAGACTCGCTTTAGAAAGCCACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: CPGLFNKSPLFSRRS*GFFRLKTRFRKPRG Trigger: TCCCCGTGGCTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGAAGAGTCCAGGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368326.5 |
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| CDS TCA 90 bp | CAGTTCAGATGGACCAATAAGTCACCACTTTTCTCCAGACGAAGTTaGGGCTTCTTTCGCTTGAAGACTCGCTTTAGAAAGCCACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: QFRWTNKSPLFSRRS*GFFRLKTRFRKPRG Trigger: TCCCCGTGGCTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGGTCCATCTGAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368328.5 |
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| CDS TCA 90 bp | GGATGGAATCTCACCAATAAGTCACCACTTTTCTCCAGACGAAGTTaGGGCTTCTTTCGCTTGAAGACTCGCTTTAGAAAGCCACGGGGA | + |
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Preference number: 5 (lower is better) Translates to: GWNLTNKSPLFSRRS*GFFRLKTRFRKPRG Trigger: TCCCCGTGGCTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGGTGAGATTCCATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368325.5 |
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| CDS GCA 72 bp | CTCTCTGTCAAGTACCAGCTGCCTCAGCTTCCGAGGTaGTCTCTGTATCGCACACAAGCTCCGGGGACACTG | + |
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Preference number: 6 (lower is better) Translates to: LSVKYQLPQLPR*SLYRTQAPGTL Trigger: CAGTGTCCCCGGAGCTTGTGTGCGATACAGAGAGCACCTCGGAAGCTGAGGCAGCTGGTACTTGACAGAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS GCA 72 bp | TGGTCGACAGCGCCATCCTCTCTGTCAAGTACCAGCTaGCTCAGCTTCCGAGGTGCTCTCTGTATCGCACAC | + |
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Preference number: 6 (lower is better) Translates to: WSTAPSSLSSTS*LSFRGALCIAH Trigger: GTGTGCGATACAGAGAGCACCTCGGAAGCTGAGGCAGCTGGTACTTGACAGAGAGGATGGCGCTGTCGACCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS CCA 72 bp | GGTGCTCTCTGTATCGCACACAAGCTCCGGGGACACTaGGCCAGCGAAAACAATCCGGTCCGTATGACGCTT | + |
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Preference number: 6 (lower is better) Translates to: GALCIAHKLRGH*ASENNPVRMTL Trigger: AAGCGTCATACGGACCGGATTGTTTTCGCTGGCCCAGTGTCCCCGGAGCTTGTGTGCGATACAGAGAGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368328.5 |
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| CDS GCA 72 bp | CGCTTTAGAAAGCCACGGGGAGCCTTCCGCTTTATCTaGTTCCTCTGGGAGACTATGGTCGACAGCGCCATC | + |
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Preference number: 6 (lower is better) Translates to: RFRKPRGAFRFI*FLWETMVDSAI Trigger: GATGGCGCTGTCGACCATAGTCTCCCAGAGGAAGCAGATAAAGCGGAAGGCTCCCCGTGGCTTTCTAAAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS CCA 72 bp | ACCTCTCCCGTGCCCCATTCCCAGCCCGAGAAGGGATaGAATCTCACCAATAAGTCACCACTTTTCTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: TSPVPHSQPEKG*NLTNKSPLFSR Trigger: TCTGGAGAAAAGTGGTGACTTATTGGTGAGATTCCATCCCTTCTCGGGCTGGGAATGGGGCACGGGAGAGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368325.5 |
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| CDS TCA 72 bp | CACTTTTCTCCAGACGAAGTTGAGGCTTCTTTCGCTTaGAGACTCGCTTTAGAAAGCCACGGGGAGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: HFSPDEVEASFA*RLALESHGEPS Trigger: GGAAGGCTCCCCGTGGCTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000368325.5 ENST00000368326.5 ENST00000368328.5 |
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| CDS TCA 72 bp | TGGACCAATAAGTCACCACTTTTCTCCAGACGAAGTTaGGGCTTCTTTCGCTTGAAGACTCGCTTTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: WTNKSPLFSRRS*GFFRLKTRFRK Trigger: CTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGGTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368328.5 |
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| CDS TCA 72 bp | CTCACCAATAAGTCACCACTTTTCTCCAGACGAAGTTaGGGCTTCTTTCGCTTGAAGACTCGCTTTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LTNKSPLFSRRS*GFFRLKTRFRK Trigger: CTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368325.5 |
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| CDS TCA 72 bp | CTCTTCAATAAGTCACCACTTTTCTCCAGACGAAGTTaGGGCTTCTTTCGCTTGAAGACTCGCTTTAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: LFNKSPLFSRRS*GFFRLKTRFRK Trigger: CTTTCTAAAGCGAGTCTTCAAGCGAAAGAAGCCTCAACTTCGTCTGGAGAAAAGTGGTGACTTATTGAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368326.5 |
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