Pregenerated sensors for CENPS (Homo sapiens)
Ensembl gene IDs: ENSG00000175279Ensembl transcript IDs: ENST00000309048.8, ENST00000462462.1, ENST00000477755.1, ENST00000602486.1
Found 17 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTCTACCTGTAGAAGGCTaGACTTTCCAAGCGGCGAGG | + |
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Preference number: 2 (lower is better) Translates to: LPVEGCTFQAARDFNSHFLPVEG*TFQAAR Trigger: CCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| 3UTR-3UTR CAA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTCCTTCAAAGTTTCCTTaGCAGCCATATGCATTTCTA | + |
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Preference number: 3 (lower is better) Translates to: LPVEGCTFQAARDFNSHFPSKFP*QPYAFL Trigger: TAGAAATGCATATGGCTGCAAAGGAAACTTTGAAGG...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| CDS-3UTR TCA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTAACGTTCTCAGCCTCTaGCGCCCCATATGCCCGGCG | + |
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Preference number: 4 (lower is better) Translates to: LPVEGCTFQAARDFNSHFNVLSL*RPICPA Trigger: CGCCGGGCATATGGGGCGTCAGAGGCTGAGAACGTT...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| CDS-3UTR CCA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTGGAAACTCCCGCGTCTaGAGCTCATTCCCGCGTTTC | + |
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Preference number: 4 (lower is better) Translates to: LPVEGCTFQAARDFNSHFGNSRV*SSFPRF Trigger: GAAACGCGGGAATGAGCTCCAGACGCGGGAGTTTCC...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| CDS-3UTR TCA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTTGCCCGCAGCTACCCTaGCAAGTGATTATTCTTATG | + |
|
Preference number: 4 (lower is better) Translates to: LPVEGCTFQAARDFNSHFCPQLP*QVIILM Trigger: CATAAGAATAATCACTTGTCAGGGTAGCTGCGGGCA...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| CDS-3UTR GCA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTCGCATGTCGTGTTCTTaGAACTTTTCTGAAGGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LPVEGCTFQAARDFNSHFRMSCS*NFSEGL Trigger: CAAACCTTCAGAAAAGTTGCAAGAACACGACATGCG...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| CDS GCA 90 bp | CATCTAAGGACGAGCTCTGGGCCTGACTGGTCCGCACCGCGTCCCTaGATCAGTAACGAGGGGTCGACGCCTCCAGGGCCAGCGTTCCAG | + |
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Preference number: 5 (lower is better) Translates to: HLRTSSGPDWSAPRP*ISNEGSTPPGPAFQ Trigger: CTGGAACGCTGGCCCTGGAGGCGTCGACCCCTCGTTACTGATGCAGGGACGCGGTGCGGACCAGTCAGGCCCAGAGCTCGTCCTTAGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477755.1 ENST00000602486.1 |
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| CDS TCA 90 bp | CCGGGTCTTGCTTTTAAGCCTCTTCACGGCAACGTTCTCAGCCTCTaGCGCCCCATATGCCCGGCGCTGATGAAAGGAACGAATGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PGLAFKPLHGNVLSL*RPICPALMKGTNGM Trigger: CATCCCATTCGTTCCTTTCATCAGCGCCGGGCATATGGGGCGTCAGAGGCTGAGAACGTTGCCGTGAAGAGGCTTAAAAGCAAGACCCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462462.1 ENST00000477755.1 |
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| CDS-3UTR CAA 90 bp | CTACCTGTAGAAGGCTGCACTTTCCAAGCGGCGAGGGACTTTAATTCTCACTTTTCGCCACTCCGGGTCTaGCTTTTAAGCCTCTTCACG | + |
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Preference number: 5 (lower is better) Translates to: LPVEGCTFQAARDFNSHFSPLRV*LLSLFT Trigger: CGTGAAGAGGCTTAAAAGCAAGACCCGGAGTGGCGA...AAAGTGAGAATTAAAGTCCCTCGCCGCTTGGAAAGTGCAGCCTTCTACAGGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000462462.1 |
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| CDS CCA 72 bp | ACCCTGGGCAAACGCAGGAGGGCCGAGAAGGGGCGGTaGTGCGCGGCCAGGTCGGATTTTCCCGCCGCGGCG | + |
|
Preference number: 6 (lower is better) Translates to: TLGKRRRAEKGR*CAARSDFPAAA Trigger: CGCCGCGGCGGGAAAATCCGACCTGGCCGCGCACCACCGCCCCTTCTCGGCCCTCCTGCGTTTGCCCAGGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000309048.8 |
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| CDS CCA 72 bp | GTCTCCGCCTCCTCCTCCATCACTGCGGGCCGACCCTaGGCAAACGCAGGAGGGCCGAGAAGGGGCGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: VSASSSITAGRP*ANAGGPRRGGG Trigger: ACCACCGCCCCTTCTCGGCCCTCCTGCGTTTGCCCAGGGTCGGCCCGCAGTGATGGAGGAGGAGGCGGAGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000309048.8 |
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| CDS CCA 72 bp | AAGGGGAAACCGAGGATTCATCGCAAGGCCAGAAGGTaGCCTCTCGCCGCCGGACCCCGGCGCCCGCACGCT | + |
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Preference number: 6 (lower is better) Translates to: KGKPRIHRKARR*PLAAGPRRPHA Trigger: AGCGTGCGGGCGCCGGGGTCCGGCGGCGAGAGGCCACCTTCTGGCCTTGCGATGAATCCTCGGTTTCCCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000477755.1 |
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| CDS GCA 72 bp | ACGAGCTCTGGGCCTGACTGGTCCGCACCGCGTCCCTaGATCAGTAACGAGGGGTCGACGCCTCCAGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TSSGPDWSAPRP*ISNEGSTPPGP Trigger: TGGCCCTGGAGGCGTCGACCCCTCGTTACTGATGCAGGGACGCGGTGCGGACCAGTCAGGCCCAGAGCTCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000477755.1 ENST00000602486.1 |
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| CDS CCA 72 bp | TCGAACCCACATCTAAGGACGAGCTCTGGGCCTGACTaGTCCGCACCGCGTCCCTGCATCAGTAACGAGGGG | + |
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Preference number: 6 (lower is better) Translates to: SNPHLRTSSGPD*SAPRPCISNEG Trigger: CCCCTCGTTACTGATGCAGGGACGCGGTGCGGACCAGTCAGGCCCAGAGCTCGTCCTTAGATGTGGGTTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000477755.1 ENST00000602486.1 |
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| CDS CAA 90 bp | CCGCGTTTCTTCAGTCCGTCCTCTTTAAGGTCGCCACTCCGGGTCTaGCTTTTAAGCCTCTTCACGGCAACGTTCTCAGCCTCTGACGCC | + |
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Preference number: 6 (lower is better) Translates to: PRFFSPSSLRSPLRV*LLSLFTATFSASDA Trigger: GGCGTCAGAGGCTGAGAACGTTGCCGTGAAGAGGCTTAAAAGCAAGACCCGGAGTGGCGACCTTAAAGAGGACGGACTGAAGAAACGCGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462462.1 ENST00000477755.1 |
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| CDS TCA 72 bp | GCTTTTAAGCCTCTTCACGGCAACGTTCTCAGCCTCTaGCGCCCCATATGCCCGGCGCTGATGAAAGGAACG | + |
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Preference number: 6 (lower is better) Translates to: AFKPLHGNVLSL*RPICPALMKGT Trigger: CGTTCCTTTCATCAGCGCCGGGCATATGGGGCGTCAGAGGCTGAGAACGTTGCCGTGAAGAGGCTTAAAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000462462.1 ENST00000477755.1 |
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| CDS CAA 72 bp | TTCAGTCCGTCCTCTTTAAGGTCGCCACTCCGGGTCTaGCTTTTAAGCCTCTTCACGGCAACGTTCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: FSPSSLRSPLRV*LLSLFTATFSA Trigger: GGCTGAGAACGTTGCCGTGAAGAGGCTTAAAAGCAAGACCCGGAGTGGCGACCTTAAAGAGGACGGACTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000462462.1 ENST00000477755.1 |
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