RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CENPO (Homo sapiens)

Ensembl gene IDs: ENSG00000138092

Ensembl transcript IDs: ENST00000260662.2, ENST00000380834.7, ENST00000473476.5, ENST00000473706.5, ENST00000486527.6, ENST00000491031.5, ENST00000498362.1

Found 753 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAGGCCCCCAGCCAGTCACTCCAGGGTTCTCCTTCCCACCCGCTaGTCGCCACGGGTGGAAGGGCTTGGCCCTGGGAGGTTTGGGGAG +
Preference number: 1 (lower is better)
Translates to: RRPPASHSRVLLPTR*SPRVEGLGPGRFGE
Trigger: CTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAGAACCCTGGAGTGACTGGCTGGGGGCCTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CCAGCTGGCCTGCCCCGCAGCAGGCTCCCTTCCCATGCAGGGGCCTaGCCCACCACCAGGAGAGACATGAGGCTCAGGACAACTGAGGCA +
Preference number: 1 (lower is better)
Translates to: PAGLPRSRLPSHAGA*PTTRRDMRLRTTEA
Trigger: TGCCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTGCTGCGGGGCAGGCCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CACCCGCTGCTCGCCACGGGTGGAAGGGCTTGGCCCTGGGAGGTTTaGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGG +
Preference number: 1 (lower is better)
Translates to: HPLLATGGRAWPWEV*GVSRTAWDPWISAR
Trigger: CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CAGGGTTCTCCTTCCCACCCGCTGCTCGCCACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCA +
Preference number: 1 (lower is better)
Translates to: QGSPSHPLLATGGRA*PWEVWGVSRTAWDP
Trigger: TGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAGAACCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp TGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAACCACCCAAAGCCCCCACCCGCCCT +
Preference number: 1 (lower is better)
Translates to: WPWEVWGVSRTAWDP*ISARLQPPKAPTRP
Trigger: AGGGCGGGTGGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp TCTCCTTCCCACCCGCTGCTCGCCACGGGTGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATC +
Preference number: 1 (lower is better)
Translates to: SPSHPLLATGGRAWP*EVWGVSRTAWDPWI
Trigger: GATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGCTaGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAG +
Preference number: 1 (lower is better)
Translates to: LHGPLAQEDKSERER*QHLADLADFALAMK
Trigger: CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp GGCTCCCTTCCCATGCAGGGGCCTGGCCCACCACCAGGAGAGACATaGGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGC +
Preference number: 1 (lower is better)
Translates to: GSLPMQGPGPPPGET*GSGQLRQFGWGGSR
Trigger: GCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp CTGCCAGGGAAGGCAGCAGAGCAGGCTGCTGCAGTGAGCGGCCCCTaGCACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAG +
Preference number: 1 (lower is better)
Translates to: LPGKAAEQAAAVSGP*HFLHGPLAQEDKSE
Trigger: CTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCTGCCTTCCCTGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTaGCCCGCAGCAGGCTCCCTTCCCATGCAGGGGCCTGGCCCACCA +
Preference number: 1 (lower is better)
Translates to: FNNFMLRIGEHPQLA*PAAGSLPMQGPGPP
Trigger: TGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp GGAAGGGCTTGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCCC +
Preference number: 1 (lower is better)
Translates to: GRAWPWEVWGVSRTA*DPWISARLQPPKAP
Trigger: GGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 90 bp GGGTGGAAGGGCTTGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGC +
Preference number: 1 (lower is better)
Translates to: GWKGLALGGLGSVPY*LGPMDQCSAPTTQS
Trigger: GCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp AGGGGCCTGGCCCACCACCAGGAGAGACATGAGGCTCAGGACAACTaGGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGA +
Preference number: 1 (lower is better)
Translates to: RGLAHHQERHEAQDN*GNSGGEVHALTGQG
Trigger: TCCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp GGCACAGGAAGACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTaGCCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAA +
Preference number: 1 (lower is better)
Translates to: GTGRQVRERALAAPG*PGRLRAGHEGYAHQ
Trigger: TTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGTCTTCCTGTGCC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp TGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAAGTCTCTGGATaGGAGGAGGCCCCCAGCCAGTCACTCCAGGGTTCTCCTTCCCAC +
Preference number: 1 (lower is better)
Translates to: CHPGDHGHPRREVSG*EEAPSQSLQGSPSH
Trigger: GTGGGAAGGAGAACCCTGGAGTGACTGGCTGGGGGCCTCCTCTCATCCAGAGACTTCTCTCCTAGGATGGCCATGGTCACCTGGGTGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp GACAACCTGACAAAACCTAAGGACCAGGACCAGGCCCAGCCAAGGTaGAGGGGTCCGCCTCGTGGTCAGACTCACAGGTCCGTCTCCTCT +
Preference number: 1 (lower is better)
Translates to: DNLTKPKDQDQAQPR*RGPPRGQTHRSVSS
Trigger: AGAGGAGACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCTTAGGTTTTGTCAGGTTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp TCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATaGGAACAAAACCGGAACAGTGCTTTCCCACGTGCCCCTGCCTCC +
Preference number: 1 (lower is better)
Translates to: SGMSSGTAGTCSDSA*EQNRNSAFPRAPAS
Trigger: GGAGGCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp AATGGCCCCTCTGTCACACTGCCCCACCAGGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAACAGTCCAAACCGGAAGGGAGAATT +
Preference number: 1 (lower is better)
Translates to: NGPSVTLPHQVVDNS*MASSLQQSKPEGRI
Trigger: AATTCTCCCTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGCATGAGAACAAAACCGGAACAGTGC +
Preference number: 1 (lower is better)
Translates to: PRGSWATFRYVQWHS*HVLRLGMRTKPEQC
Trigger: GCACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp GGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTaGCACAGCTGGCACGTGCTCAGACTCGGCATGAGAACAAAACCG +
Preference number: 1 (lower is better)
Translates to: GWSPRGSWATFRYVQ*HSWHVLRLGMRTKP
Trigger: CGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp AGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATaGAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACT +
Preference number: 1 (lower is better)
Translates to: SAGSTWLTWPTSRWP*RIRSPTSTTSPSIT
Trigger: AGTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp GCCCCTCTGTCACACTGCCCCACCAGGTGGTGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGTCCAAACCGGAAGGGAGAATTTATT +
Preference number: 1 (lower is better)
Translates to: APLSHCPTRWWTTPE*PRACNSPNRKGEFI
Trigger: AATAAATTCTCCCTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp AGATGGCTTCTGAGGCCCATAACAAGGTGTGGCCTGTGGCTGTGCTaGACTTTATGCCTCTACCCTAGGCATGAACAAAGGCGGGGTTCT +
Preference number: 1 (lower is better)
Translates to: RWLLRPITRCGLWLC*TLCLYPRHEQRRGS
Trigger: AGAACCCCGCCTTTGTTCATGCCTAGGGTAGAGGCATAAAGTTCAGCACAGCCACAGGCCACACCTTGTTATGGGCCTCAGAAGCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 90 bp GGTCAGACTCACAGGTCCGTCTCCTCTGCTCAATTGCCCAGTCTTTaGCTAGACCTGCTACGTGAACTTTGTCACAGTGGCAAGTCAGAG +
Preference number: 1 (lower is better)
Translates to: GQTHRSVSSAQLPSL*LDLLRELCHSGKSE
Trigger: CTCTGACTTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGGCAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTGTGAGTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp TGTGCCTACTGTTACAATAGAAGCTTGGCCTGCCTGGCTGAGAAGTaGGTTTGTGATCCATTTCCAGAGGGGTTGCTGTGCCTGCTGAGG +
Preference number: 1 (lower is better)
Translates to: CAYCYNRSLACLAEK*VCDPFPEGLLCLLR
Trigger: CCTCAGCAGGCACAGCAACCCCTCTGGAAATGGATCACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACAGTAGGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp GTTTGTGATCCATTTCCAGAGGGGTTGCTGTGCCTGCTGAGGACATaGCTTCCCAGACAGGCCTGCTCTTTGAAAGGAGTTAAGATCACC +
Preference number: 1 (lower is better)
Translates to: VCDPFPEGLLCLLRT*LPRQACSLKGVKIT
Trigger: GGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGGATCACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp GACCTGCTACGTGAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTaGCTGCGACTCCTTTGTGGGAGGAAAAGTAAGGCCTTGAACATC +
Preference number: 1 (lower is better)
Translates to: DLLRELCHSGKSELA*LRLLCGRKSKALNI
Trigger: GATGTTCAAGGCCTTACTTTTCCTCCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTCACGTAGCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CATCATCCTGCTTTACCTCTACAACCATCCCACGGCCCTATTATATaGATGAGGTTAAAGAAACACGTCCAAGGCGGGTCATCCCCCTCC +
Preference number: 1 (lower is better)
Translates to: HHPALPLQPSHGPII*MRLKKHVQGGSSPS
Trigger: GGAGGGGGATGACCCGCCTTGGACGTGTTTCTTTAACCTCATCCATATAATAGGGCCGTGGGATGGTTGTAGAGGTAAAGCAGGATGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp TTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTaGGCTCTGAGGGTGGCCCTGCTATTCCTGTGTGTGCCTGTAGTG +
Preference number: 1 (lower is better)
Translates to: FRFRNLLSLHLFVDV*ALRVALLFLCVPVV
Trigger: CACTACAGGCACACACAGGAATAGCAGGGCCACCCTCAGAGCTCACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 90 bp GTAGGAGCCCTGGTCCCAAGCTCTGGTCTTAAAACACCATCATCCTaGTTTACCTCTACAACCATCCCACGGCCCTATTATATGGATGAG +
Preference number: 1 (lower is better)
Translates to: VGALVPSSGLKTPSS*FTSTTIPRPYYMDE
Trigger: CTCATCCATATAATAGGGCCGTGGGATGGTTGTAGAGGTAAAGCAGGATGATGGTGTTTTAAGACCAGAGCTTGGGACCAGGGCTCCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp AGATGCATATGGCCTACCTTTGGGTATGAACCTTCTAATACCTTGTaGTCTGTCTCAGTGGCGTCTGGCAGAAAAGCTCCACGAAAGGGG +
Preference number: 1 (lower is better)
Translates to: RCIWPTFGYEPSNTL*SVSVASGRKAPRKG
Trigger: CCCCTTTCGTGGAGCTTTTCTGCCAGACGCCACTGAGACAGATCACAAGGTATTAGAAGGTTCATACCCAAAGGTAGGCCATATGCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp TCCGACTATACTGTGCCTACTGTTACAATAGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTGATCCATTTCCAGAGGGGTTGCTGT +
Preference number: 1 (lower is better)
Translates to: SDYTVPTVTIEAWPA*LRSEFVIHFQRGCC
Trigger: ACAGCAACCCCTCTGGAAATGGATCACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACAGTAGGCACAGTATAGTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 90 bp CTAGCCTCAGCACAGGAAGAAACACTTCCACCCATCCACAAAATCTaGGCTGAAGTTCTAGATGCATATGGCCTACCTTTGGGTATGAAC +
Preference number: 1 (lower is better)
Translates to: LASAQEETLPPIHKI*AEVLDAYGLPLGMN
Trigger: GTTCATACCCAAAGGTAGGCCATATGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTGTGCTGAGGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 90 bp CTCAGCACAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTaGAGTTCTAGATGCATATGGCCTACCTTTGGGTATGAACCTTCT +
Preference number: 1 (lower is better)
Translates to: LSTGRNTSTHPQNLG*SSRCIWPTFGYEPS
Trigger: AGAAGGTTCATACCCAAAGGTAGGCCATATGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTGTGCTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 90 bp CCAGGGTTCTCCTTCCCACCCGCTGCTCGCCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCC +
Preference number: 2 (lower is better)
Translates to: PGFSFPPAARHGWKG*ALGGLGSVPYCLGP
Trigger: GGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAGAACCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTGCCGTCCTTGCCCCTaGGGGGCCCTGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKCRPCP*GALTTV
Trigger: CACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCTCCTTCCCACCCGCTaGTCGCCACGGGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKLLPTR*SPRVEG
Trigger: CCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCAGGCTCCCTTCCCATaGAGGGGCCTGGCCCACCAC +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLQAPFP*RGLAHH
Trigger: GTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 90 bp CCACCCGCTGCTCGCCACGGGTGGAAGGGCTTGGCCCTGGGAGGTTaGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCG +
Preference number: 2 (lower is better)
Translates to: PPAARHGWKGLALGG*GSVPYCLGPMDQCS
Trigger: CGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCATGCTGCGCATAGGTaGGCACCCCCAGCTGGCCTG +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLHAAHR*APPAGL
Trigger: CAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGCAGTGAGCGGCCCCTaGCACTTTCTCCACGGTCCC +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLAVSGP*HFLHGP
Trigger: GGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCAGTGCTTTCCCACGTaGCCCTGCCTCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRQCFPT*PCLPPW
Trigger: CCAGGGTGGGAGGCAGGGGCACGTGGGAAAGCACTG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCAGGCGGGGTTCTGGCTaGGGTCATCGGAGCCCGGAA +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRRRGSG*GHRSPE
Trigger: TTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCT...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGTGAGCACCCCCAGCTaGCCTGCCCCGCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRVSTPS*PAPQQA
Trigger: AGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCAC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTCCATGTGGTCCGAGTaGGGTGAGACGGCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRSMWSE*GETALV
Trigger: GACGAGGGCCGTCTCACCTCACTCGGACCACATGGA...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGCCCCTCTGTCACACTaGCCCACCAGGTGGTGGACA +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLAPLSH*PTRWWT
Trigger: TGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCACAAAGGCGGGGTTCTaGCTGGGGTCATCGGAGCCC +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRTKAGF*LGSSEP
Trigger: GGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGT...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGACAAAGGCGGGGTTCTaGCTGGGGTCATCGGAGCCC +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKTKAGF*LGSSEP
Trigger: GGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCTCCCACCCTGGCCCTaGACAGTAAGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKLPPWP*TVSPEA
Trigger: TGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCACCCCCAGCTGGCCTaGCCCGCAGCAGGCTCCCTT +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESHPQLA*PAAGSL
Trigger: AAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGGCTTTCCGGGACTGTaGAGGGAGCACAGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRGFPGL*REHRRG
Trigger: TCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGGAGGGTGGCAGAGCTaGGACAAAGCTGCCTTTGCC +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLGGWQS*DKAAFA
Trigger: GGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCTCC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCGGAGGGTGGCAGAGCTaGGACAAAGCTGCCTTTGCC +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRGGWQS*DKAAFA
Trigger: GGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCTCC...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCTGGCCCTGGGAGGTTTaGGGAGTGTCCCGTACTGCT +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLWPWEV*GVSRTA
Trigger: AGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGCTGCTCGCCACGGGTaGAAGGGCTTGGCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIAARHG*KGLALG
Trigger: TCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGCTGCTCGCCACGGGTaGAAGGGCTTGGCCCTGGGA +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTAARHG*KGLALG
Trigger: TCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGGCGGGGTTCTGGCTaGGGTCATCGGAGCCCGGAA +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRRRGSG*GHRSPE
Trigger: TTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTGCCTGCTGAGGACATaGCTTCCCAGACAGGCCTGC +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKCLLRT*LPRQAC
Trigger: GCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGCACCTGGCTGACCTaGCCGACTTCGCGCTGGCCA +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRSTWLT*PTSRWP
Trigger: TGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 90 bp TGGAAGGGCTTGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCC +
Preference number: 2 (lower is better)
Translates to: WKGLALGGLGSVPYC*GPMDQCSAPTTQSP
Trigger: GGGGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGTGGTCCGAGTGAGGTaGGACGGCCCTCGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTVVRVR*DGPRPG
Trigger: ACCAGGACGAGGGCCGTCTCACCTCACTCGGACCAC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAA +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRVVDNS*MASSLQ
Trigger: TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCAC...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGGACCCATGGATCAGTaGTCGGCTCCAACCACCCAA +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLGPMDQ*SAPTTQ
Trigger: TTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCTCCTTCCCACCCGCTaGTCGCCACGGGTGGAAGGG +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESLLPTR*SPRVEG
Trigger: CCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGGCTTTCCGGGACTGTaGAGGGAGCACAGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: WEVWGVSRTAWDPWISARGFPGL*REHRRG
Trigger: TCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCACTGCCCCACCAGGTaGTGGACAACTCCTGAATGG +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLHCPTR*WTTPEW
Trigger: CCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCC +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRGRAWP*EVWGVS
Trigger: GGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTCCATGTGGTCCGAGTaGGGTGAGACGGCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: WEVWGVSRTAWDPWISARSMWSE*GETALV
Trigger: GACGAGGGCCGTCTCACCTCACTCGGACCACATGGA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCACTTCGCGCTGGCCATaGAGGATACGCTCACCAACA +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLTSRWP*RIRSPT
Trigger: TGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCGAATGGCCTCGAGCCTaGAACAGTCCAAACCGGAAG +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSREWPRA*NSPNRK
Trigger: CTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTC...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGCCCCTCTGTCACACTaGCCCACCAGGTGGTGGACA +
Preference number: 2 (lower is better)
Translates to: WEVWGVSRTAWDPWISARAPLSH*PTRWWT
Trigger: TGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCAGTGCTTTCCCACGTaGCCCTGCCTCCCACCCTGG +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKQCFPT*PCLPPW
Trigger: CCAGGGTGGGAGGCAGGGGCACGTGGGAAAGCACTG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCACAAAACCGGAACAGTaGTTTCCCACGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRTKPEQ*FPTCPC
Trigger: GCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGT...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGACAAAACCGGAACAGTaGTTTCCCACGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKTKPEQ*FPTCPC
Trigger: GCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGC +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIVQWHS*HVLRLG
Trigger: GCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGAC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGC +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTVQWHS*HVLRLG
Trigger: GCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGAC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGAGGCGGGGTTCTGGCTaGGGTCATCGGAGCCCGGAA +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKRRGSG*GHRSPE
Trigger: TTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGACATGGCTCCCATTTTaGAGGGAGGTCTCCATGTGG +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKTWLPF*REVSMW
Trigger: CCACATGGAGACCTCCCTTCAAAATGGGAGCCATGT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCACGGCTTCCGCTTTGTaGGGCGAGGCCCCATCTTTG +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNITASAL*GEAPSL
Trigger: CAAAGATGGGGCCTCGCCTCACAAAGCGGAAGCCGT...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGAGGCTCAGGACAACTaGGGCAATTCGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIEAQDN*GNSGGE
Trigger: CTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGCCCCTCTGTCACACTaGCCCACCAGGTGGTGGACA +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESAPLSH*PTRWWT
Trigger: TGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCC +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKGRAWP*EVWGVS
Trigger: GGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKTGGRA*PWEVWG
Trigger: TCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCCAGAGGCAGAGACGTaGGGCAAGTGGAAAAGAATC +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKPEAET*GKWKRI
Trigger: GATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTG +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLEAWPA*LRSEFV
Trigger: CACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACTGAGGCAATTCGGGTaGGGAGGTTCACGCACTCAC +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRLRQFG*GGSRTH
Trigger: GTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGGGGATTTATTTCTCTaGTGTGCTCCCAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEGDLFL*CAPSAV
Trigger: CACTGCACTGGGAGCACATCAGAGAAATAAATCCCC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGTCCATGTGGTCCGAGTaGGGTGAGACGGCCCTCGTC +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQSMWSE*GETALV
Trigger: GACGAGGGCCGTCTCACCTCACTCGGACCACATGGA...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGGTATCATTCCTGAGTaGGGTCCCAGGAGACTTGAA +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKGIIPE*GPRRLE
Trigger: TTCAAGTCTCCTGGGACCTCACTCAGGAATGATACC...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGGGGGTATCATTCCTaGGTGAGGTCCCAGGAGACT +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRRGYHS*VRSQET
Trigger: AGTCTCCTGGGACCTCACTCAGGAATGATACCCCCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGAGGCTCAGGACAACTaGGGCAATTCGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAEAQDN*GNSGGE
Trigger: CTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCCACCAGGAGAGACATaGGGCTCAGGACAACTGAGG +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIPPGET*GSGQLR
Trigger: CCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGAGCTGGGACAAAGCTaGCTTTGCCGCTGGGCTTTC +
Preference number: 2 (lower is better)
Translates to: SRTAWDPWISARLQPPKAELGQS*LCRWAF
Trigger: GAAAGCCCAGCGGCAAAGGCAGCTTTGTCCCAGCTC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGGACCCATGGATCAGTaGTCGGCTCCAACCACCCAA +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIGPMDQ*SAPTTQ
Trigger: TTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCAGCTGCCTTTGCCGCTaGGCTTTCCGGGACTGTGGA +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESSCLCR*AFRDCG
Trigger: TCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGAGGGTGGCAGAGCTaGGACAAAGCTGCCTTTGCC +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKGGWQS*DKAAFA
Trigger: GGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCTCC...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACATGCCCCACCAGGTGGTaGACAACTCCTGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTCPTRW*TTPEWP
Trigger: AGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCA...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCT +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRVSRTA*DPWISA
Trigger: AGCACTGATCCATGGGTCCCAAGCAGTACGGGACAC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGTGGCCCTGGGAGGTTTaGGGAGTGTCCCGTACTGCT +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARWPWEV*GVSRTA
Trigger: AGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: SRMESTGVMGNIQVCPVATGGRA*PWEVWG
Trigger: TCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCAGAAGAGCAGGCAGTaGCAGTTTCCAGGTAACAGT +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKQKSRQ*QFPGNS
Trigger: ACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCTGTGATCTGTCTCAGTaGCGTCTGGCAGAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLCDLSQ*RLAEKL
Trigger: GAGCTTTTCTGCCAGACGCCACTGAGACAGATCACA...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCAGCTGTGTTAGAAGCTaGCCACTACCATGCCGAGTA +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRSCVRS*PLPCRV
Trigger: TACTCGGCATGGTAGTGGCCAGCTTCTAACACAGCT...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGACGGCTTCCGCTTTGTaGGGCGAGGCCCCATCTTTG +
Preference number: 2 (lower is better)
Translates to: QFPGNSAATQVTMAILGETASAL*GEAPSL
Trigger: CAAAGATGGGGCCTCGCCTCACAAAGCGGAAGCCGT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAACGGCTTCCGCTTTGTaGGGCGAGGCCCCATCTTTG +
Preference number: 2 (lower is better)
Translates to: SRMESTGVMGNIQVCPVATASAL*GEAPSL
Trigger: CAAAGATGGGGCCTCGCCTCACAAAGCGGAAGCCGT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATCTCCCACCCTGGCCCTaGACAGTAAGTCCAGAGGCA +
Preference number: 2 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHLPPWP*TVSPEA
Trigger: TGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAG...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAG +
Preference number: 2 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAGSVPY*LGPMDQ
Trigger: CTGATCCATGGGTCCCAAGCAGTACGGGACACTCCC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAG +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARGSVPY*LGPMDQ
Trigger: CTGATCCATGGGTCCCAAGCAGTACGGGACACTCCC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCTTCCCAGACAGGCCTaGTCTTTGAAAGGAGTTAAG +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLLPRQA*SLKGVK
Trigger: CTTAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGCAGAGCAGGCTGCTaGAGTGAGCGGCCCCTGACA +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSRAGC*SERPLT
Trigger: TGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCAAGTCCCGACCTTCCTaGATTGAAGTGCACACTCAT +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLKSRPS*IEVHTH
Trigger: ATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAGCCACCTTCCCCAATaGCCCCTCTGTCACACTGCC +
Preference number: 2 (lower is better)
Translates to: QFPGNSAATQVTMAILGESHLPQ*PLCHTA
Trigger: GGCAGTGTGACAGAGGGGCCATTGGGGAAGGTGGCT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAA +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTTAWDP*ISARLQ
Trigger: TTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCC +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGGRAWP*EVWGVS
Trigger: GGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCGTTACAATAGAAGCTTaGCCTGCCTGGCTGAGAAGT +
Preference number: 2 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRVTIEA*PAWLRS
Trigger: ACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAAC...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGTGAGCACCCCCAGCTaGCCTGCCCCGCAGCAGGCT +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNVSTPS*PAPQQA
Trigger: AGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCAC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACTGCCGTCCTTGCCCCTaGGGGGCCCTGACCACTGTG +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNCRPCP*GALTTV
Trigger: CACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCA...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCCGACCTTCCTGGATTaGAGTGCACACTCATGGACT +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIPTFLD*SAHSWT
Trigger: AGTCCATGAGTGTGCACTTCAATCCAGGAAGGTCGG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGGTTGCTGTGCCTGCTaGGGACATGGCTTCCCAGAC +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGGCCAC*GHGFPD
Trigger: GTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCTTCCTGGATTGAAGTaGACACTCATGGACTTTAGG +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLLPGLK*TLMDFR
Trigger: CCTAAAGTCCATGAGTGTGCACTTCAATCCAGGAAG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGAATGGCCTCGAGCCTaGAACAGTCCAAACCGGAAG +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESEWPRA*NSPNRK
Trigger: CTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGACAAAACCGGAACAGTaGTTTCCCACGTGCCCCTGC +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKTKPEQ*FPTCPC
Trigger: GCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGT +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIWTTPE*PRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCTGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGT +
Preference number: 2 (lower is better)
Translates to: SRTAWDPWISARLQPPKAWTTPE*PRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCA...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGTGCCCCACCAGGTGGTaGACAACTCCTGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: QFPGNSAATQVTMAILGECPTRW*TTPEWP
Trigger: AGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCA...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCACTGCCCCACCAGGTaGTGGACAACTCCTGAATGG +
Preference number: 2 (lower is better)
Translates to: QFPGNSAATQVTMAILGEHCPTR*WTTPEW
Trigger: CCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGCCACCTTCCCCAATaGCCCCTCTGTCACACTGCC +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSHLPQ*PLCHTA
Trigger: GGCAGTGTGACAGAGGGGCCATTGGGGAAGGTGGCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAA +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESTAWDP*ISARLQ
Trigger: TTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGT...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAA +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKTAWDP*ISARLQ
Trigger: TTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAAGTCCACGGGGGTCATaGGCAACATTCAGGTATGTC +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTSPRGS*ATFRYV
Trigger: GACATACCTGAATGTTGCCCATGACCCCCGTGGACT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAA +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGVVDNS*MASSLQ
Trigger: TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCAC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTGCTCAGACTCGGCATaGGAACAAAACCGGAACAGT +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNICSDSA*EQNRNS
Trigger: ACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAGGGGGTATCATTCCTaGGTGAGGTCCCAGGAGACT +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQRGYHS*VRSQET
Trigger: AGTCTCCTGGGACCTCACTCAGGAATGATACCCCCT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACCAGACGACTCTAGATaGCTAAACCAAAAACCCAGC +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRPDDSR*LNQKPS
Trigger: GCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCAGAAGAGCAGGCAGTaGCAGTTTCCAGGTAACAGT +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIQKSRQ*QFPGNS
Trigger: ACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACATGTCTCAGTGGCGTCTaGCAGAAAAGCTCCACGAAA +
Preference number: 2 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTCLSGV*QKSSTK
Trigger: TTTCGTGGAGCTTTTCTGCCAGACGCCACTGAGACA...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGGTCTGGAGAGGAGATaGCTTCTGAGGCCCATAACA +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARGLERR*LLRPIT
Trigger: TGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAACATTAGGAGCTTTGTaGTACAGGTCTGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRTLGAL*YRSGEE
Trigger: CTCCTCTCCAGACCTGTACCACAAAGCTCCTAATGT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTG +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESEAWPA*LRSEFV
Trigger: CACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGGGATTTATTTCTCTaGTGTGCTCCCAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKGDLFL*CAPSAV
Trigger: CACTGCACTGGGAGCACATCAGAGAAATAAATCCCC...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGACATGGCTCCCATTTTaGAGGGAGGTCTCCATGTGG +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQTWLPF*REVSMW
Trigger: CCACATGGAGACCTCCCTTCAAAATGGGAGCCATGT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATCCGACCTTCCTGGATTaGAGTGCACACTCATGGACT +
Preference number: 2 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHPTFLD*SAHSWT
Trigger: AGTCCATGAGTGTGCACTTCAATCCAGGAAGGTCGG...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGGTATCATTCCTGAGTaGGGTCCCAGGAGACTTGAA +
Preference number: 2 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAGIIPE*GPRRLE
Trigger: TTCAAGTCTCCTGGGACCTCACTCAGGAATGATACC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCCAGACGACTCTAGATaGCTAAACCAAAAACCCAGC +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIPDDSR*LNQKPS
Trigger: GCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTTTATTTCTCTGATGTaGTCCCAGTGCAGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKFISLM*SQCSEN
Trigger: GTTTTCACTGCACTGGGAGCACATCAGAGAAATAAA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAATTTATTTCTCTGATGTaGTCCCAGTGCAGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEFISLM*SQCSEN
Trigger: GTTTTCACTGCACTGGGAGCACATCAGAGAAATAAA...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGT +
Preference number: 2 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAWTTPE*PRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCT +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGVSRTA*DPWISA
Trigger: AGCACTGATCCATGGGTCCCAAGCAGTACGGGACAC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCAGTTCTAGATGCATATaGCCTACCTTTGGGTATGAA +
Preference number: 2 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLSSRCI*PTFGYE
Trigger: TTCATACCCAAAGGTAGGCCATATGCATCTAGAACT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGAGTTCTAGATGCATATaGCCTACCTTTGGGTATGAA +
Preference number: 2 (lower is better)
Translates to: RERWQHLADLADFALAMKSSRCI*PTFGYE
Trigger: TTCATACCCAAAGGTAGGCCATATGCATCTAGAACT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAGTCCACGGGGGTCATaGGCAACATTCAGGTATGTC +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQSPRGS*ATFRYV
Trigger: GACATACCTGAATGTTGCCCATGACCCCCGTGGACT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACCACACTACGACATCTaGGGCAATACAGTCAATGTA +
Preference number: 2 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRPHYDI*GNTVNV
Trigger: TACATTGACTGTATTGCCCCAGATGTCGTAGTGTGG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGGGATTTATTTCTCTaGTGTGCTCCCAGTGCAGTG +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQGDLFL*CAPSAV
Trigger: CACTGCACTGGGAGCACATCAGAGAAATAAATCCCC...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGTGGTCCGAGTGAGGTaGGACGGCCCTCGTCCTGGT +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTVVRVR*DGPRPG
Trigger: ACCAGGACGAGGGCCGTCTCACCTCACTCGGACCAC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGACATGGCTCCCATTTTaGAGGGAGGTCTCCATGTGG +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGTWLPF*REVSMW
Trigger: CCACATGGAGACCTCCCTTCAAAATGGGAGCCATGT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGCTCAGACTCGGCATaGGAACAAAACCGGAACAGT +
Preference number: 2 (lower is better)
Translates to: SRMESTGVMGNIQVCPVACSDSA*EQNRNS
Trigger: ACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGAGGTCCCAGGAGACTTaGAATACCAGCTGTGTTAGA +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKRSQET*NTSCVR
Trigger: TCTAACACAGCTGGTATTTCAAGTCTCCTGGGACCT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAGGTCCCAGGAGACTTaGAATACCAGCTGTGTTAGA +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARRSQET*NTSCVR
Trigger: TCTAACACAGCTGGTATTTCAAGTCTCCTGGGACCT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTGCCTGGCTGAGAAGTaGGTTTGTGATCCATTTCCA +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESCLAEK*VCDPFP
Trigger: TGGAAATGGATCACAAACTCACTTCTCAGCCAGGCA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCCAGACGACTCTAGATaGCTAAACCAAAAACCCAGC +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKPDDSR*LNQKPS
Trigger: GCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGAGGCTCAGGACAACTaGGGCAATTCGGGTGGGGAG +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNEAQDN*GNSGGE
Trigger: CTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCTTCCTGGATTGAAGTaGACACTCATGGACTTTAGG +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNILPGLK*TLMDFR
Trigger: CCTAAAGTCCATGAGTGTGCACTTCAATCCAGGAAG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGAGCTGGCCACTACCATaGCGAGTAAATCTGCATATG +
Preference number: 2 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKSWPLP*RVNLHM
Trigger: CATATGCAGATTTACTCGGCATGGTAGTGGCCAGCT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCTTCCCAGACAGGCCTaGTCTTTGAAAGGAGTTAAG +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESLPRQA*SLKGVK
Trigger: CTTAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGGCTTTCCGGGACTGTaGAGGGAGCACAGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAGFPGL*REHRRG
Trigger: TCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAAGTCCCGACCTTCCTaGATTGAAGTGCACACTCAT +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARKSRPS*IEVHTH
Trigger: ATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCAGAAGAGCAGGCAGTaGCAGTTTCCAGGTAACAGT +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQQKSRQ*QFPGNS
Trigger: ACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGTGTCTCAGTGGCGTCTaGCAGAAAAGCTCCACGAAA +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQCLSGV*QKSSTK
Trigger: TTTCGTGGAGCTTTTCTGCCAGACGCCACTGAGACA...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGTGTGATCTGTCTCAGTaGCGTCTGGCAGAAAAGCTC +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQCDLSQ*RLAEKL
Trigger: GAGCTTTTCTGCCAGACGCCACTGAGACAGATCACA...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCCACACTACGACATCTaGGGCAATACAGTCAATGTA +
Preference number: 2 (lower is better)
Translates to: LADLADFALAMKDTLTNIPHYDI*GNTVNV
Trigger: TACATTGACTGTATTGCCCCAGATGTCGTAGTGTGG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCACATTAGGAGCTTTGTaGTACAGGTCTGGAGAGGAG +
Preference number: 2 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESTLGAL*YRSGEE
Trigger: CTCCTCTCCAGACCTGTACCACAAAGCTCCTAATGT...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAGCGCTGGCAGCACCTaGCTGACCTGGCCGACTTCG +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTSAGST*LTWPTS
Trigger: CGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACCTTCTAATACCTTGTaGTCTGTCTCAGTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAPSNTL*SVSVAS
Trigger: AGACGCCACTGAGACAGATCACAAGGTATTAGAAGG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGCCACAAAATCTGGGCTaGAGTTCTAGATGCATATGG +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARPQNLG*SSRCIW
Trigger: CCATATGCATCTAGAACTTCAGCCCAGATTTTGTGG...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCACCACAAAATCTGGGCTaGAGTTCTAGATGCATATGG +
Preference number: 2 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAPQNLG*SSRCIW
Trigger: CCATATGCATCTAGAACTTCAGCCCAGATTTTGTGG...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAGGTCCCAGGAGACTTaGAATACCAGCTGTGTTAGA +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQRSQET*NTSCVR
Trigger: TCTAACACAGCTGGTATTTCAAGTCTCCTGGGACCT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAGCTGGCCACTACCATaGCGAGTAAATCTGCATATG +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQSWPLP*RVNLHM
Trigger: CATATGCAGATTTACTCGGCATGGTAGTGGCCAGCT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAAGTCCCGACCTTCCTaGATTGAAGTGCACACTCAT +
Preference number: 2 (lower is better)
Translates to: QFPGNSAATQVTMAILGEKSRPS*IEVHTH
Trigger: ATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAGCATACAGCCAAGTTaGATGAGGACAATGATGTGT +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARSIQPS*MRTMMC
Trigger: ACACATCATTGTCCTCATTCAACTTGGCTGTATGCT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAACCAAAAACCCAGCTaGTGTGATGATCCGACTATA +
Preference number: 2 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARNQKPS*CDDPTI
Trigger: TATAGTCGGATCATCACATCAGCTGGGTTTTTGGTT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAGCTGCCTTTGCCGCTaGGCTTTCCGGGACTGTGGA +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTSCLCR*AFRDCG
Trigger: TCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCT +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNVSRTA*DPWISA
Trigger: AGCACTGATCCATGGGTCCCAAGCAGTACGGGACAC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCCACACTACGACATCTaGGGCAATACAGTCAATGTA +
Preference number: 2 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQPHYDI*GNTVNV
Trigger: TACATTGACTGTATTGCCCCAGATGTCGTAGTGTGG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCCGACCTTCCTGGATTaGAGTGCACACTCATGGACT +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNPTFLD*SAHSWT
Trigger: AGTCCATGAGTGTGCACTTCAATCCAGGAAGGTCGG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGAGCTGGGACAAAGCTaGCTTTGCCGCTGGGCTTTC +
Preference number: 2 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAELGQS*LCRWAF
Trigger: GAAAGCCCAGCGGCAAAGGCAGCTTTGTCCCAGCTC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCATGCCCCACCAGGTGGTaGACAACTCCTGAATGGCCT +
Preference number: 2 (lower is better)
Translates to: QEETLPPIHKIWAEVLDACPTRW*TTPEWP
Trigger: AGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCA...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCACACTGCCCCACCAGGTaGTGGACAACTCCTGAATGG +
Preference number: 2 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAHCPTR*WTTPEW
Trigger: CCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTG...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGAGACGTGGGGCAAGTaGAAAAGAATCTCTGCAATA +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGETWGK*KRISAI
Trigger: TATTGCAGAGATTCTTTTCCACTTGCCCCACGTCTC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCCAGAGGCAGAGACGTaGGGCAAGTGGAAAAGAATC +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNPEAET*GKWKRI
Trigger: GATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCTGAGGCAATTCGGGTaGGGAGGTTCACGCACTCAC +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTLRQFG*GGSRTH
Trigger: GTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGCATACAGCCAAGTTaGATGAGGACAATGATGTGT +
Preference number: 2 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSIQPS*MRTMMC
Trigger: ACACATCATTGTCCTCATTCAACTTGGCTGTATGCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTTTATTTCTCTGATGTaGTCCCAGTGCAGTGAAAAC +
Preference number: 2 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHFISLM*SQCSEN
Trigger: GTTTTCACTGCACTGGGAGCACATCAGAGAAATAAA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR GCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGAATGGCCTCGAGCCTaGAACAGTCCAAACCGGAAG +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTEWPRA*NSPNRK
Trigger: CTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGCCCATAACAAGGTGTaGCCTGTGGCTGTGCTGAAC +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTAHNKV*PVAVLN
Trigger: GTTCAGCACAGCCACAGGCCACACCTTGTTATGGGC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGACAGGCCTGCTCTTTaGAAGGAGTTAAGATCACCT +
Preference number: 2 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNDRPAL*KELRSP
Trigger: AGGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCAGGGCAAGGAGACCTaGAAGACCTTTAGTCCAGAC +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTQGKET*KTFSPD
Trigger: GTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCACCTTCTAATACCTTGTaGTCTGTCTCAGTGGCGTCT +
Preference number: 2 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAPSNTL*SVSVAS
Trigger: AGACGCCACTGAGACAGATCACAAGGTATTAGAAGG...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGGAAAAGTAAGGCCTTaGACATCTAGGTGTAGGGAA +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTGKVRP*TSRCRE
Trigger: TTCCCTACACCTAGATGTTCAAGGCCTTACTTTTCC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 90 bp ATCCACAAAATCTGGGCTGAAGTTCTAGATGCATATGGCCTACCTTaGGGTATGAACCTTCTAATACCTTGTGATCTGTCTCAGTGGCGT +
Preference number: 2 (lower is better)
Translates to: IHKIWAEVLDAYGLP*GMNLLIPCDLSQWR
Trigger: ACGCCACTGAGACAGATCACAAGGTATTAGAAGGTTCATACCCAAAGGTAGGCCATATGCATCTAGAACTTCAGCCCAGATTTTGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAACCAAAAACCCAGCTaGTGTGATGATCCGACTATA +
Preference number: 2 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTNQKPS*CDDPTI
Trigger: TATAGTCGGATCATCACATCAGCTGGGTTTTTGGTT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp CCAGCCAGTCACTCCAGGGTTCTCCTTCCCACCCGCTaGTCGCCACGGGTGGAAGGGCTTGGCCCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: PASHSRVLLPTR*SPRVEGLGPGR
Trigger: CCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAGAACCCTGGAGTGACTGGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CACCCGCTGCTCGCCACGGGTGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGAC +
Preference number: 3 (lower is better)
Translates to: HPLLATGGRAWP*EVWGVSRTAWD
Trigger: GTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CCTTCCCACCCGCTGCTCGCCACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCT +
Preference number: 3 (lower is better)
Translates to: PSHPLLATGGRA*PWEVWGVSRTA
Trigger: AGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CTGCCCCGCAGCAGGCTCCCTTCCCATGCAGGGGCCTaGCCCACCACCAGGAGAGACATGAGGCTCAGGACA +
Preference number: 3 (lower is better)
Translates to: LPRSRLPSHAGA*PTTRRDMRLRT
Trigger: TGTCCTGAGCCTCATGTCTCTCCTGGTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTGCTGCGGGGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp GGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTaGTCGGCTCCAACCACCCAAAGCCCCCACCCGCCC +
Preference number: 3 (lower is better)
Translates to: GSVPYCLGPMDQ*SAPTTQSPHPP
Trigger: GGGCGGGTGGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp AGGGTGGCAGAGCTGGGACAAAGCTGCCTTTGCCGCTaGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGG +
Preference number: 3 (lower is better)
Translates to: RVAELGQSCLCR*AFRDCGGSTGG
Trigger: CCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGCTaGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTG +
Preference number: 3 (lower is better)
Translates to: PLAQEDKSERER*QHLADLADFAL
Trigger: CAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp CCCCAGAACACTGCCAGGGAAGGCAGCAGAGCAGGCTaGTGCAGTGAGCGGCCCCTGACACTTTCTCCACGG +
Preference number: 3 (lower is better)
Translates to: PQNTAREGSRAG*CSERPLTLSPR
Trigger: CCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCTGCCTTCCCTGGCAGTGTTCTGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: LADLADFALAMKDTLTNIHGWKG*ALGGLG
Trigger: CCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp AAGGCAGCAGAGCAGGCTGCTGCAGTGAGCGGCCCCTaGCACTTTCTCCACGGTCCCCTGGCACAGGAAGAC +
Preference number: 3 (lower is better)
Translates to: KAAEQAAAVSGP*HFLHGPLAQED
Trigger: GTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCTGCCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp GGCTTGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAGTGCTCGGCTCCAACC +
Preference number: 3 (lower is better)
Translates to: GLALGGLGSVPY*LGPMDQCSAPT
Trigger: GGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp TGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCTCGGCTCCAACCACCC +
Preference number: 3 (lower is better)
Translates to: WPWEVWGVSRTA*DPWISARLQPP
Trigger: GGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGC +
Preference number: 3 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRSVPYC*GPMDQC
Trigger: GCACTGATCCATGGGTCCCAAGCAGTACGGGACACT...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESHGWKG*ALGGLG
Trigger: CCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGG +
Preference number: 3 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARHGWKG*ALGGLG
Trigger: CCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTG...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp AGACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTaGCCTGGCCGACTTCGCGCTGGCCATGAAGGATAC +
Preference number: 3 (lower is better)
Translates to: RQVRERALAAPG*PGRLRAGHEGY
Trigger: GTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGTCT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp ACAAAGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTaGAGGGAGCACAGGCGGGGAAGCTCCACTTCAGAC +
Preference number: 3 (lower is better)
Translates to: TKLPLPLGFPGL*REHRRGSSTSD
Trigger: GTCTGAAGTGGAGCTTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCTTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp GAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAACCACCCAAAGCCCCC +
Preference number: 3 (lower is better)
Translates to: EVWGVSRTAWDP*ISARLQPPKAP
Trigger: GGGGGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp GGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTaGTCAGACTCACAGGTCCGTCTCCTCTGCTCAATT +
Preference number: 3 (lower is better)
Translates to: GPGPAKVKGSAS*SDSQVRLLCSI
Trigger: AATTGAGCAGAGGAGACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp ACAAAACCTAAGGACCAGGACCAGGCCCAGCCAAGGTaGAGGGGTCCGCCTCGTGGTCAGACTCACAGGTCC +
Preference number: 3 (lower is better)
Translates to: TKPKDQDQAQPR*RGPPRGQTHRS
Trigger: GGACCTGTGAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCTTAGGTTTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CCAATGGCCCCTCTGTCACACTGCCCCACCAGGTGGTaGACAACTCCTGAATGGCCTCGAGCCTGCAACAGT +
Preference number: 3 (lower is better)
Translates to: PMAPLSHCPTRW*TTPEWPRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGCCATTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATTGGCCCTGGGAGGTTaGGGGAGTGTCCCGTACTGC +
Preference number: 3 (lower is better)
Translates to: SRMESTGVMGNIQVCPVALALGG*GSVPYC
Trigger: GCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp TCACACTGCCCCACCAGGTGGTGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGTCCAAACCGGAAGGGA +
Preference number: 3 (lower is better)
Translates to: SHCPTRWWTTPE*PRACNSPNRKG
Trigger: TCCCTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGC +
Preference number: 3 (lower is better)
Translates to: SRMESTGVMGNIQVCPVASVPYC*GPMDQC
Trigger: GCACTGATCCATGGGTCCCAAGCAGTACGGGACACT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp TCTGTCACACTGCCCCACCAGGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAACAGTCCAAACCGGAA +
Preference number: 3 (lower is better)
Translates to: SVTLPHQVVDNS*MASSLQQSKPE
Trigger: TTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTGTGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp TCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATaGGAACAAAACCGGAACAGTGCTTTCCCACGTGCC +
Preference number: 3 (lower is better)
Translates to: SSGTAGTCSDSA*EQNRNSAFPRA
Trigger: GGCACGTGGGAAAGCACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp TCCGCCTCGTGGTCAGACTCACAGGTCCGTCTCCTCTaGTCAATTGCCCAGTCTTTGCCTAGACCTGCTACG +
Preference number: 3 (lower is better)
Translates to: SASWSDSQVRLL*SIAQSLPRPAT
Trigger: CGTAGCAGGTCTAGGCAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTGTGAGTCTGACCACGAGGCGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CTCTACCCTAGGCATGAACAAAGGCGGGGTTCTGGCTaGGGTCATCGGAGCCCGGAAACCACACTACGACAT +
Preference number: 3 (lower is better)
Translates to: LYPRHEQRRGSG*GHRSPETTLRH
Trigger: ATGTCGTAGTGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCTAGGGTAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp ACACAACCCCCTGCTGTTCACAGCTCAGGCCTAAGATaGTTGTGTTCTGTGGCCAGGCCCCCTAAGGCTCTG +
Preference number: 3 (lower is better)
Translates to: TQPPAVHSSGLR*LCSVARPPKAL
Trigger: CAGAGCCTTAGGGGGCCTGGCCACAGAACACAACCATCTTAGGCCTGAGCTGTGAACAGCAGGGGGTTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCTGCTGACCTTCTTCTaGAAGGGGCGGGATAAGCTA +
Preference number: 3 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKLLTFF*KGRDKL
Trigger: TAGCTTATCCCGCCCCTTCAAGAAGAAGGTCAGCAG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGC +
Preference number: 3 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSVPYC*GPMDQC
Trigger: GCACTGATCCATGGGTCCCAAGCAGTACGGGACACT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCGCATATGGCCTACCTTaGGGTATGAACCTTCTAATA +
Preference number: 3 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRAYGLP*GMNLLI
Trigger: TATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGCATATGGCCTACCTTaGGGTATGAACCTTCTAATA +
Preference number: 3 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLAYGLP*GMNLLI
Trigger: TATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGCCATTTCCAGAGGGGTaGCTGTGCCTGCTGAGGACA +
Preference number: 3 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGPFPEG*LCLLRT
Trigger: TGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGG...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATGACATGGCTCCCATTTaGAAGGGAGGTCTCCATGTG +
Preference number: 3 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHDMAPI*KGGLHV
Trigger: CACATGGAGACCTCCCTTCAAAATGGGAGCCATGTC...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCAGACAGGCCTGCTCTTaGAAAGGAGTTAAGATCACC +
Preference number: 3 (lower is better)
Translates to: LADLADFALAMKDTLTNIRQACS*KGVKIT
Trigger: GGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTCT...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CCATTTCCAGAGGGGTTGCTGTGCCTGCTGAGGACATaGCTTCCCAGACAGGCCTGCTCTTTGAAAGGAGTT +
Preference number: 3 (lower is better)
Translates to: PFPEGLLCLLRT*LPRQACSLKGV
Trigger: AACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGTGTTACAATAGAAGCTaGGCCTGCCTGGCTGAGAAG +
Preference number: 3 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQCYNRS*ACLAEK
Trigger: CTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACA...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp CACAGGTCCGTCTCCTCTGCTCAATTGCCCAGTCTTTaGCTAGACCTGCTACGTGAACTTTGTCACAGTGGC +
Preference number: 3 (lower is better)
Translates to: HRSVSSAQLPSL*LDLLRELCHSG
Trigger: GCCACTGTGACAAAGTTCACGTAGCAGGTCTAGGCAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp TCATGGGCAACATTCAGGTATGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGCATGAGAACAAAACCG +
Preference number: 3 (lower is better)
Translates to: SWATFRYVQWHS*HVLRLGMRTKP
Trigger: CGGTTTTGTTCTCATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCCCATGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp CGTGAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTaGCTGCGACTCCTTTGTGGGAGGAAAAGTAAGGCC +
Preference number: 3 (lower is better)
Translates to: RELCHSGKSELA*LRLLCGRKSKA
Trigger: GGCCTTACTTTTCCTCCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp AGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTaGGCTCTGAGGGTGGCCCTGCTATTCCTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: RNLLSLHLFVDV*ALRVALLFLCV
Trigger: CACACACAGGAATAGCAGGGCCACCCTCAGAGCTCACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp CTGAGGCCCATAACAAGGTGTGGCCTGTGGCTGTGCTaGACTTTATGCCTCTACCCTAGGCATGAACAAAGG +
Preference number: 3 (lower is better)
Translates to: LRPITRCGLWLC*TLCLYPRHEQR
Trigger: CCTTTGTTCATGCCTAGGGTAGAGGCATAAAGTTCAGCACAGCCACAGGCCACACCTTGTTATGGGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp GGCTGCGACTCCTTTGTGGGAGGAAAAGTAAGGCCTTaGACATCTAGGTGTAGGGAATCCACCCCCAGAACA +
Preference number: 3 (lower is better)
Translates to: GCDSFVGGKVRP*TSRCRESTPRT
Trigger: TGTTCTGGGGGTGGATTCCCTACACCTAGATGTTCAAGGCCTTACTTTTCCTCCCACAAAGGAGTCGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGACAGGCCTGCTCTTaGAAAGGAGTTAAGATCACC +
Preference number: 3 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGRQACS*KGVKIT
Trigger: GGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGGTGTTCCTGATCATCTaGAAAGGTTCTTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: QFPGNSAATQVTMAILGEVFLII*KGSSGT
Trigger: AGTTCCAGAAGAACCTTTCAAGATGATCAGGAACAC...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGACATGGCTCCCATTTaGAAGGGAGGTCTCCATGTG +
Preference number: 3 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNDMAPI*KGGLHV
Trigger: CACATGGAGACCTCCCTTCAAAATGGGAGCCATGTC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp TGCTCAATTGCCCAGTCTTTGCCTAGACCTGCTACGTaGACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTG +
Preference number: 3 (lower is better)
Translates to: CSIAQSLPRPAT*TLSQWQVRASV
Trigger: CACGCTAGCTCTGACTTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGGCAAAGACTGGGCAATTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR GCA 72 bp TGGTTGTGTTCTGTGGCCAGGCCCCCTAAGGCTCTGTaGTTTCATAGGAACTGGAGAGCAATTGTCAACAAG +
Preference number: 3 (lower is better)
Translates to: WLCSVARPPKAL*FHRNWRAIVNK
Trigger: CTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGGCCTGGCCACAGAACACAACCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGTGTTCCTGATCATCTaGAAAGGTTCTTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGVFLII*KGSSGT
Trigger: AGTTCCAGAAGAACCTTTCAAGATGATCAGGAACAC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp TGTTACAATAGAAGCTTGGCCTGCCTGGCTGAGAAGTaGGTTTGTGATCCATTTCCAGAGGGGTTGCTGTGC +
Preference number: 3 (lower is better)
Translates to: CYNRSLACLAEK*VCDPFPEGLLC
Trigger: GCACAGCAACCCCTCTGGAAATGGATCACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp ACTGTGCCTACTGTTACAATAGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTGATCCATTTCCAGAGG +
Preference number: 3 (lower is better)
Translates to: TVPTVTIEAWPA*LRSEFVIHFQR
Trigger: CCTCTGGAAATGGATCACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACAGTAGGCACAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CCA 72 bp GCACAGGAAGAAACACTTCCACCCATCCACAAAATCTaGGCTGAAGTTCTAGATGCATATGGCCTACCTTTG +
Preference number: 3 (lower is better)
Translates to: AQEETLPPIHKI*AEVLDAYGLPL
Trigger: CAAAGGTAGGCCATATGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp GGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTaGAGTTCTAGATGCATATGGCCTACCTTTGGGTAT +
Preference number: 3 (lower is better)
Translates to: GRNTSTHPQNLG*SSRCIWPTFGY
Trigger: ATACCCAAAGGTAGGCCATATGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGTGTTCCTGATCATCTaGAAAGGTTCTTCTGGAACT +
Preference number: 3 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTVFLII*KGSSGT
Trigger: AGTTCCAGAAGAACCTTTCAAGATGATCAGGAACAC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR-3UTR CAA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGCATATGGCCTACCTTaGGGTATGAACCTTCTAATA +
Preference number: 3 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTAYGLP*GMNLLI
Trigger: TATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR TCA 72 bp TTTTTGAAACTGAAGGAAGTCCCGACCTTCCTGGATTaGAGTGCACACTCATGGACTTTAGGTTTAGAAACC +
Preference number: 3 (lower is better)
Translates to: FLKLKEVPTFLD*SAHSWTLGLET
Trigger: GGTTTCTAAACCTAAAGTCCATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTTCCTTCAGTTTCAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGACGCTGGCTCGCCGGTaGCGCACCACAGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKTLARR*RTTALS
Trigger: GCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCACCCCCAGCTGGCCTaGCCCGCAGCAGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRHPQLA*PAAGSL
Trigger: AAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCACCCCCAGCTGGCCTaGCCCGCAGCAGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKHPQLA*PAAGSL
Trigger: AAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGTGAGCACCCCCAGCTaGCCTGCCCCGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEVSTPS*PAPQQA
Trigger: AGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCAC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAACTGGCAGCACCTGGCTaGCCTGGCCGACTTCGCGCT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGELAAPG*PGRLRA
Trigger: AGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAG...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGGCAGCAGAGCAGGCTaGTGCAGTGAGCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEGSRAG*CSERPL
Trigger: CAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCTGCC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGCTGCTCGCCACGGGTaGAAGGGCTTGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEAARHG*KGLALG
Trigger: TCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 72 bp TCCTTCCCACCCGCTGCTCGCCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGC +
Preference number: 4 (lower is better)
Translates to: SFPPAARHGWKG*ALGGLGSVPYC
Trigger: GCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGTGGTCCGAGTGAGGTaGGACGGCCCTCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEVVRVR*DGPRPG
Trigger: ACCAGGACGAGGGCCGTCTCACCTCACTCGGACCAC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGGCTTTCCGGGACTGTaGAGGGAGCACAGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLGFPGL*REHRRG
Trigger: TCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCAGCACCTGGCTGACCTaGCCGACTTCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLSTWLT*PTSRWP
Trigger: TGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTGCCGTACAAAAGCATaGCGGCGCTCAGGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKCRTKA*RRSGPR
Trigger: GCGGGGCCCTGAGCGCCGCCATGCTTTTGTACGGCA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR GCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGACGCTGGCTCGCCGGTaGCGCACCACAGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARTLARR*RTTALS
Trigger: GCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCACCCCCAGCTGGCCTaGCCCGCAGCAGGCTCCCTT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAHPQLA*PAAGSL
Trigger: AAGGGAGCCTGCTGCGGGGCAGGCCAGCTGGGGGTG...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLGRAWP*EVWGVS
Trigger: GGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAACAAAGGCGGGGTTCTaGCTGGGGTCATCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGETKAGF*LGSSEP
Trigger: GGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGT...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGTGAGCACCCCCAGCTaGCCTGCCCCGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIVSTPS*PAPQQA
Trigger: AGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCAC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 72 bp GCTCGCCACGGGTGGAAGGGCTTGGCCCTGGGAGGTTaGGGGAGTGTCCCGTACTGCTTGGGACCCATGGAT +
Preference number: 4 (lower is better)
Translates to: ARHGWKGLALGG*GSVPYCLGPMD
Trigger: ATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGTGGTCCGAGTGAGGTaGGACGGCCCTCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRVVRVR*DGPRPG
Trigger: ACCAGGACGAGGGCCGTCTCACCTCACTCGGACCAC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTGCCGTCCTTGCCCCTaGGGGGCCCTGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNICRPCP*GALTTV
Trigger: CACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGACGGCTTCCGCTTTGTaGGGCGAGGCCCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKTASAL*GEAPSL
Trigger: CAAAGATGGGGCCTCGCCTCACAAAGCGGAAGCCGT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTGGCAGCACCTGGCTaGCCTGGCCGACTTCGCGCT +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARLAAPG*PGRLRA
Trigger: AGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAG...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCAGGCCCAGCCAAGGTaGAGGGGTCCGCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARQAQPR*RGPPRG
Trigger: ACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTG...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGCACCTTCCTGGGCCTaGACGCTCTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEAPSWA*TLCSSS
Trigger: TGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACAGGCTCCCTTCCCATaGAGGGGCCTGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTQAPFP*RGLAHH
Trigger: GTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCGGCCACCGCGGCCTTaGACACTCACCGCGACCACC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESRPPRP*TLTATT
Trigger: GGTGGTCGCGGTGAGTGTGCAAGGCCGCGGTGGCCG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCAGCTGCCTTTGCCGCTaGGCTTTCCGGGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLSCLCR*AFRDCG
Trigger: TCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGGAGGGTGGCAGAGCTaGGACAAAGCTGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEGGWQS*DKAAFA
Trigger: GGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCTCC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCAGCCACCTTCCCCAATaGCCCCTCTGTCACACTGCC +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLSHLPQ*PLCHTA
Trigger: GGCAGTGTGACAGAGGGGCCATTGGGGAAGGTGGCT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCCTGGGAGGTTTaGGGAGTGTCCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRWPWEV*GVSRTA
Trigger: AGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAATGGCCCTGGGAGGTTTaGGGAGTGTCCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEWPWEV*GVSRTA
Trigger: AGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGCTGCTCGCCACGGGTaGAAGGGCTTGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAAARHG*KGLALG
Trigger: TCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGTGAGCACCCCCAGCTaGCCTGCCCCGCAGCAGGCT +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESVSTPS*PAPQQA
Trigger: AGCCTGCTGCGGGGCAGGCCAGCTGGGGGTGCTCAC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTGCCGTCCTTGCCCCTaGGGGGCCCTGACCACTGTG +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESCRPCP*GALTTV
Trigger: CACAGTGGTCAGGGCCCCTCAGGGGCAAGGACGGCA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKVVDNS*MASSLQ
Trigger: TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCAC...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
63% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCATGCTGCGCATAGGTaGGCACCCCCAGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAHAAHR*APPAGL
Trigger: CAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATG...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCTCAGGGCCCCGCCCTaGTCCCAAGATGCACCGGGG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGELRAPP*SQDAPG
Trigger: CCCCGGTGCATCTTGGGATCAGGGCGGGGCCCTGAG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCTCCTTCCCACCCGCTaGTCGCCACGGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKLLPTR*SPRVEG
Trigger: CCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCAGGCTCCCTTCCCATaGAGGGGCCTGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKQAPFP*RGLAHH
Trigger: GTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGGTCCCGGCGTGCTTTaGGATCCTGCCGTACAAAAG +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEGPGVL*DPAVQK
Trigger: CTTTTGTACGGCAGGATCGCAAAGCACGCCGGGACC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCACTGCCCCACCAGGTaGTGGACAACTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKHCPTR*WTTPEW
Trigger: CCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRTGGRA*PWEVWG
Trigger: TCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCTGAGGCAATTCGGGTaGGGAGGTTCACGCACTCAC +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLLRQFG*GGSRTH
Trigger: GTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCTGAGGCAATTCGGGTaGGGAGGTTCACGCACTCAC +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKLRQFG*GGSRTH
Trigger: GTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGATCCGAGAGAGAGCGCTaGCAGCACCTGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRSERER*QHLADL
Trigger: CAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGA...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTCCATGTGGTCCGAGTaGGGTGAGACGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNISMWSE*GETALV
Trigger: GACGAGGGCCGTCTCACCTCACTCGGACCACATGGA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGCAGTGAGCGGCCCCTaGCACTTTCTCCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARAVSGP*HFLHGP
Trigger: GGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCAGGCCCAGCCAAGGTaGAGGGGTCCGCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEQAQPR*RGPPRG
Trigger: ACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCACTCTGAAGCCGGTCTaGCTGGTACTTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLTLKPV*LVLPPR
Trigger: TCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGAATGGCCTCGAGCCTaGAACAGTCCAAACCGGAAG +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEEWPRA*NSPNRK
Trigger: CTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGCCCCTCTGTCACACTaGCCCACCAGGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAAPLSH*PTRWWT
Trigger: TGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGCCCCTCTGTCACACTaGCCCACCAGGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIAPLSH*PTRWWT
Trigger: TGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACTCCTTCCCACCCGCTaGTCGCCACGGGTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVALLPTR*SPRVEG
Trigger: CCCTTCCACCCGTGGCGAGCAGCGGGTGGGAAGGAG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCACAAAACCGGAACAGTaGTTTCCCACGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLTKPEQ*FPTCPC
Trigger: GCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAAGCAGAGCAGGCTGCTaGAGTGAGCGGCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTSRAGC*SERPLT
Trigger: TGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCGTGCTTTGCGATCCTaGCGTACAAAAGCATGGCGG +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLRALRS*RTKAWR
Trigger: CCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCCAAGAGCACCTTCCTaGGCCTGCACGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIPRAPS*ACTLCS
Trigger: GCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKTAWDP*ISARLQ
Trigger: TTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKATGGRA*PWEVWG
Trigger: TCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGAGCGCTGGCAGCACCTaGCTGACCTGGCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKSAGST*LTWPTS
Trigger: CGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAATGGCCTTCAGAACTCTaGCTGACGGCAGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEWPSEL*LTAACS
Trigger: AGAACAGGCTGCCGTCAGCCAGAGTTCTGAAGGCCA...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCAAGCTCCGTTCTCCTaGCCGGCGGGCGCACTGGTA +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESQAPFS*PAGALV
Trigger: TACCAGTGCGCCCGCCGGCCAGGAGAACGGAGCTTG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGTCCGGCCTTTCGGGTaGTCAGGAAGATGGCGGCCT +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIVRPFG*SGRWRP
Trigger: AGGCCGCCATCTTCCTGACCACCCGAAAGGCCGGAC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
3UTR CAA 72 bp TTGGCCCTGGGAGGTTTGGGGAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGCTCGGCTCCAACCACC +
Preference number: 4 (lower is better)
Translates to: LALGGLGSVPYC*GPMDQCSAPTT
Trigger: GGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGTCCATGTGGTCCGAGTaGGGTGAGACGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARSMWSE*GETALV
Trigger: GACGAGGGCCGTCTCACCTCACTCGGACCACATGGA...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAACGGCTTCCGCTTTGTaGGGCGAGGCCCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTTASAL*GEAPSL
Trigger: CAAAGATGGGGCCTCGCCTCACAAAGCGGAAGCCGT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCAGGGCAAGGAGACCTaGAAGACCTTTAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRQGKET*KTFSPD
Trigger: GTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACCACCAGGAGAGACATaGGGCTCAGGACAACTGAGG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRPPGET*GSGQLR
Trigger: CCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGGCAGTGAGCGGCCCCTaGCACTTTCTCCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEAVSGP*HFLHGP
Trigger: GGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGC...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCTTCAGAACTCTGGCTaGCGGCAGCCTGTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKLQNSG*RQPVLL
Trigger: CAAAAGAACAGGCTGCCGTCAGCCAGAGTTCTGAAG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGCACCTTCCTGGGCCTaGACGCTCTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARAPSWA*TLCSSS
Trigger: TGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGGCAGCAGAGCAGGCTaGTGCAGTGAGCGGCCCCTG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGGSRAG*CSERPL
Trigger: CAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCTGCC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGGACTCCAATGTCCTTaGCAGGCCAGAAGCGAGAAT +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKGLQCP*QARSEN
Trigger: ATTCTCGCTTCTGGCCTGGCAAGGACATTGGAGTCC...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380834.7
CDS-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCGGGATCTGCTCACTTaGGTCTCTAGCCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRRDLLT*VSSLSK
Trigger: CTTGGAAAGGCTAGAGACCCAAGTGAGCAGATCCCG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCTACATGCTTTCACGCTaGCTCGCCGGTGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAYMLSR*LAGAAP
Trigger: TGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTA...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGAGCTGCCTTTGCCGCTaGGCTTTCCGGGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARSCLCR*AFRDCG
Trigger: TCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAAGCCACCTTCCCCAATaGCCCCTCTGTCACACTGCC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTSHLPQ*PLCHTA
Trigger: GGCAGTGTGACAGAGGGGCCATTGGGGAAGGTGGCT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGCTGCTCGCCACGGGTaGAAGGGCTTGGCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGAARHG*KGLALG
Trigger: TCCCAGGGCCAAGCCCTTCCACCCGTGGCGAGCAGC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCCAGAGGCAGAGACGTaGGGCAAGTGGAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRPEAET*GKWKRI
Trigger: GATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAVQWHS*HVLRLG
Trigger: GCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGAC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESVQWHS*HVLRLG
Trigger: GCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGAC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATAGCGCTGGCAGCACCTaGCTGACCTGGCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHSAGST*LTWPTS
Trigger: CGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGTCCGAGAGAGAGCGCTaGCAGCACCTGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKSERER*QHLADL
Trigger: CAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGA...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGAAGGGGTCCGCCTCGTaGTCAGACTCACAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARKGSAS*SDSQVR
Trigger: ACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGATGGTTGTGTTCTGTaGCCAGGCCCCCTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRDGCVL*PGPLRL
Trigger: GAGCCTTAGGGGGCCTGGCCACAGAACACAACCATC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCAGAACAGAGTTTCATaGGATGCTCGTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRQNRVS*DARCSS
Trigger: GGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGTGGTCCGAGTGAGGTaGGACGGCCCTCGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGVVRVR*DGPRPG
Trigger: ACCAGGACGAGGGCCGTCTCACCTCACTCGGACCAC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATCCATGTGGTCCGAGTaGGGTGAGACGGCCCTCGTC +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVASMWSE*GETALV
Trigger: GACGAGGGCCGTCTCACCTCACTCGGACCACATGGA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAVVDNS*MASSLQ
Trigger: TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCAC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGTGGTGGACAACTCCTaGATGGCCTCGAGCCTGCAA +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTVVDNS*MASSLQ
Trigger: TTGCAGGCTCGAGGCCATTCAGGAGTTGTCCACCAC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGGTATCATTCCTGAGTaGGGTCCCAGGAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEGIIPE*GPRRLE
Trigger: TTCAAGTCTCCTGGGACCTCACTCAGGAATGATACC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGGTTGCTGTGCCTGCTaGGGACATGGCTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESGCCAC*GHGFPD
Trigger: GTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCACTGTTTACGGGATCTaGTCACTTGGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLTVYGI*SLGSLA
Trigger: GGCTAGAGACCCAAGTGAGCAGATCCCGTAAACAGT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGGACCCATGGATCAGTaGTCGGCTCCAACCACCCAA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARGPMDQ*SAPTTQ
Trigger: TTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIGSVPY*LGPMDQ
Trigger: CTGATCCATGGGTCCCAAGCAGTACGGGACACTCCC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAGCAGAGCAGGCTGCTaGAGTGAGCGGCCCCTGACA +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQSRAGC*SERPLT
Trigger: TGTCAGGGGCCGCTCACTGCAGCAGCCTGCTCTGCT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCCCCCTAAGGCTCTGTaGTTTCATAGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRPPKAL*FHRNWR
Trigger: TCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCCCCCTAAGGCTCTGTaGTTTCATAGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKPPKAL*FHRNWR
Trigger: TCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCAACCGGTCCCGGCGTaGTTTGCGATCCTGCCGTAC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEQPVPA*FAILPY
Trigger: GTACGGCAGGATCGCAAAGCACGCCGGGACCGGTTG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCCAAGAGCACCTTCCTaGGCCTGCACGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEPRAPS*ACTLCS
Trigger: GCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCACTGCCCCACCAGGTaGTGGACAACTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIHCPTR*WTTPEW
Trigger: CCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTGGCCCTGGGAGGTTTaGGGAGTGTCCCGTACTGCT +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESWPWEV*GVSRTA
Trigger: AGCAGTACGGGACACTCCCCAAACCTCCCAGGGCCA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEGRAWP*EVWGVS
Trigger: GGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCAGAAGAGCAGGCAGTaGCAGTTTCCAGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLQKSRQ*QFPGNS
Trigger: ACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGTGATCTGTCTCAGTaGCGTCTGGCAGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRCDLSQ*RLAEKL
Trigger: GAGCTTTTCTGCCAGACGCCACTGAGACAGATCACA...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGGCGGGGTTCTGGCTaGGGTCATCGGAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGRRGSG*GHRSPE
Trigger: TTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATACAAAGGCGGGGTTCTaGCTGGGGTCATCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHTKAGF*LGSSEP
Trigger: GGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGCACCTGGCTGACCTaGCCGACTTCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSTWLT*PTSRWP
Trigger: TGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTTCTCCACGGTCCCCTaGCACAGGAAGACAAGTCCG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIFSTVP*HRKTSP
Trigger: CGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTTCTCCACGGTCCCCTaGCACAGGAAGACAAGTCCG +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARFSTVP*HRKTSP
Trigger: CGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGATGGCCTTCAGAACTCTaGCTGACGGCAGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRWPSEL*LTAACS
Trigger: AGAACAGGCTGCCGTCAGCCAGAGTTCTGAAGGCCA...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 72 bp CAACCCCCTGCTGTTCACAGCTCAGGCCTAAGATGGTaGTGTTCTGTGGCCAGGCCCCCTAAGGCTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QPPAVHSSGLRW*CSVARPPKALC
Trigger: GCACAGAGCCTTAGGGGGCCTGGCCACAGAACACAACCATCTTAGGCCTGAGCTGTGAACAGCAGGGGGTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGCCTCAAAAGCAGTACTaGTGCAGACACAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKPQKQY*CRHKLL
Trigger: GAGGAGTTTGTGTCTGCATCAGTACTGCTTTTGAGG...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGGAAGAGTTGCTGTaGGGTCCTTATACAGCAATC +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRWEELL*GPYTAI
Trigger: GATTGCTGTATAAGGACCTCACAGCAACTCTTCCCA...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCAATGAGGCAAACACTTaGTGCAAGGGCTTCGTACAG +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRNEANT*CKGFVQ
Trigger: CTGTACGAAGCCCTTGCATCAAGTGTTTGCCTCATT...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCTCCCACCCTGGCCCTaGACAGTAAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGELPPWP*TVSPEA
Trigger: TGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGAGGTCCCAGGAGACTTaGAATACCAGCTGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKRSQET*NTSCVR
Trigger: TCTAACACAGCTGGTATTTCAAGTCTCCTGGGACCT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGACAGGCCTGCTCTTTaGAAGGAGTTAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEDRPAL*KELRSP
Trigger: AGGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTGCCTGGCTGAGAAGTaGGTTTGTGATCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKCLAEK*VCDPFP
Trigger: TGGAAATGGATCACAAACTCACTTCTCAGCCAGGCA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCCACCAGGAGAGACATaGGGCTCAGGACAACTGAGG +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESPPGET*GSGQLR
Trigger: CCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACTTCAGAACTCTGGCTaGCGGCAGCCTGTTCTTTTG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRLQNSG*RQPVLL
Trigger: CAAAAGAACAGGCTGCCGTCAGCCAGAGTTCTGAAG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGATGGGCCTGCACGCTCTaGAGCTCTTCAGACTGTTTA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRWACTL*SSSDCL
Trigger: TAAACAGTCTGAAGAGCTGCAGAGCGTGCAGGCCCA...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATGCACCTTCCTGGGCCTaGACGCTCTGCAGCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHAPSWA*TLCSSS
Trigger: TGAAGAGCTGCAGAGCGTGCAGGCCCAGGAAGGTGC...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCCCAGTCAGGAGGGCTaGAAAGTCACTCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKPSQEG*KVTLKP
Trigger: CGGCTTCAGAGTGACTTTGCAGCCCTCCTGACTGGG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCACACAGTGGGTTTCTCTaGAAGGGCCCAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAHSGFL*KGPVRR
Trigger: CCTCCTGACTGGGCCCTTGCAGAGAAACCCACTGTG...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGAGCTGGGACAAAGCTaGCTTTGCCGCTGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESELGQS*LCRWAF
Trigger: GAAAGCCCAGCGGCAAAGGCAGCTTTGTCCCAGCTC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAG +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESGSVPY*LGPMDQ
Trigger: CTGATCCATGGGTCCCAAGCAGTACGGGACACTCCC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCACAAAACCGGAACAGTaGTTTCCCACGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKATKPEQ*FPTCPC
Trigger: GCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCTTCCCAGACAGGCCTaGTCTTTGAAAGGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRLPRQA*SLKGVK
Trigger: CTTAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCCAATTGCCCAGTCTTTaGCTAGACCTGCTACGTGAA +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLQLPSL*LDLLRE
Trigger: TTCACGTAGCAGGTCTAGGCAAAGACTGGGCAATTG...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAACTAAAACACCTCCTTTaGACTCGCCATCTGGACGTA +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGELKHLL*TRHLDV
Trigger: TACGTCCAGATGGCGAGTCCAAAGGAGGTGTTTTAG...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACGGGATCTGCTCACTTaGGTCTCTAGCCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRRDLLT*VSSLSK
Trigger: CTTGGAAAGGCTAGAGACCCAAGTGAGCAGATCCCG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTACATGCTTTCACGCTaGCTCGCCGGTGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHYMLSR*LAGAAP
Trigger: TGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAGCTGCCTTTGCCGCTaGGCTTTCCGGGACTGTGGA +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGESCLCR*AFRDCG
Trigger: TCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAAAGTCCCGACCTTCCTaGATTGAAGTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEKSRPS*IEVHTH
Trigger: ATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTT...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTGCCCCACCAGGTGGTaGACAACTCCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESCPTRW*TTPEWP
Trigger: AGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAAGCCACCTTCCCCAATaGCCCCTCTGTCACACTGCC +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVASHLPQ*PLCHTA
Trigger: GGCAGTGTGACAGAGGGGCCATTGGGGAAGGTGGCT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTVSRTA*DPWISA
Trigger: AGCACTGATCCATGGGTCCCAAGCAGTACGGGACAC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGCCCATAACAAGGTGTaGCCTGTGGCTGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTAHNKV*PVAVLN
Trigger: GTTCAGCACAGCCACAGGCCACACCTTGTTATGGGC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAACATTAGGAGCTTTGTaGTACAGGTCTGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGETLGAL*YRSGEE
Trigger: CTCCTCTCCAGACCTGTACCACAAAGCTCCTAATGT...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTGCCTGCTGAGGACATaGCTTCCCAGACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHCLLRT*LPRQAC
Trigger: GCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGCCTGCTGAGGACATaGCTTCCCAGACAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVACLLRT*LPRQAC
Trigger: GCAGGCCTGTCTGGGAAGCCATGTCCTCAGCAGGCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGTCCGAGAGAGAGCGCTaGCAGCACCTGGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSERER*QHLADL
Trigger: CAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGA...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAAGGGGTCCGCCTCGTaGTCAGACTCACAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQKGSAS*SDSQVR
Trigger: ACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATAAGGGGTCCGCCTCGTaGTCAGACTCACAGGTCCGT +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHKGSAS*SDSQVR
Trigger: ACGGACCTGTGAGTCTGACCACGAGGCGGACCCCTT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCTGGCCTTCAGAACTCTaGCTGACGGCAGCCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAWPSEL*LTAACS
Trigger: AGAACAGGCTGCCGTCAGCCAGAGTTCTGAAGGCCA...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGATGGTTGTGTTCTGTaGCCAGGCCCCCTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKDGCVL*PGPLRL
Trigger: GAGCCTTAGGGGGCCTGGCCACAGAACACAACCATC...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGATGGTTGTGTTCTGTaGCCAGGCCCCCTAAGGCTC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESDGCVL*PGPLRL
Trigger: GAGCCTTAGGGGGCCTGGCCACAGAACACAACCATC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAATCTAGCCTTTCCAAGTaGGCTAAAACACCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGESSLSK*AKTPPL
Trigger: CAAAGGAGGTGTTTTAGCTCACTTGGAAAGGCTAGA...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGGTACTCGCAGAGACTaGACAGGAAGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAGTRRD*TGSAGC
Trigger: ACATCCAGCACTTCCTGTTCAGTCTCTGCGAGTACC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGGTACTCGCAGAGACTaGACAGGAAGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARGTRRD*TGSAGC
Trigger: ACATCCAGCACTTCCTGTTCAGTCTCTGCGAGTACC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACTTGACATGTCACGGTaGCGTCAGTGGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTLDMSR*RQWEEL
Trigger: CAACTCTTCCCACTGACGTCACCGTGACATGTCAAG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGACATGGCTCCCATTTTaGAGGGAGGTCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARTWLPF*REVSMW
Trigger: CCACATGGAGACCTCCCTTCAAAATGGGAGCCATGT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAACATGGCTCCCATTTTaGAGGGAGGTCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTTWLPF*REVSMW
Trigger: CCACATGGAGACCTCCCTTCAAAATGGGAGCCATGT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGACGGCTTCCGCTTTGTaGGGCGAGGCCCCATCTTTG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGTASAL*GEAPSL
Trigger: CAAAGATGGGGCCTCGCCTCACAAAGCGGAAGCCGT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCCACAAAATCTGGGCTaGAGTTCTAGATGCATATGG +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRPQNLG*SSRCIW
Trigger: CCATATGCATCTAGAACTTCAGCCCAGATTTTGTGG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGCTCCCACCCTGGCCCTaGACAGTAAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGLPPWP*TVSPEA
Trigger: TGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAG...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGATGCTCAGACTCGGCATaGGAACAAAACCGGAACAGT +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRCSDSA*EQNRNS
Trigger: ACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCA...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATAAACAGGAGATGTaGTTTCCACCCTCCAATAGC +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKDKQEM*FPPSNS
Trigger: GCTATTGGAGGGTGGAAATCACATCTCCTGTTTATC...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCAGGGCAAGGAGACCTaGAAGACCTTTAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIQGKET*KTFSPD
Trigger: GTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCCACCAGGAGAGACATaGGGCTCAGGACAACTGAGG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEPPGET*GSGQLR
Trigger: CCTCAGTTGTCCTGAGCCTCATGTCTCTCCTGGTGG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCTGGCAGCACCTGGCTaGCCTGGCCGACTTCGCGCT +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNLAAPG*PGRLRA
Trigger: AGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCAGGCCCAGCCAAGGTaGAGGGGTCCGCCTCGTGGT +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNQAQPR*RGPPRG
Trigger: ACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCCCAGTCAGGAGGGCTaGAAAGTCACTCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEPSQEG*KVTLKP
Trigger: CGGCTTCAGAGTGACTTTGCAGCCCTCCTGACTGGG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCACAGTGGGTTTCTCTaGAAGGGCCCAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQHSGFL*KGPVRR
Trigger: CCTCCTGACTGGGCCCTTGCAGAGAAACCCACTGTG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAGGACCCATGGATCAGTaGTCGGCTCCAACCACCCAA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAGPMDQ*SAPTTQ
Trigger: TTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCC...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGGGACCCATGGATCAGTaGTCGGCTCCAACCACCCAA +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEGPMDQ*SAPTTQ
Trigger: TTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCC...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCAGGCTCCCTTCCCATaGAGGGGCCTGGCCCACCAC +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNQAPFP*RGLAHH
Trigger: GTGGTGGGCCAGGCCCCTGCATGGGAAGGGAGCCTG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCAGGTCCGTCTCCTCTaGTCAATTGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIQVRLL*SIAQSL
Trigger: CAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGTGATGTATCCGGAGTaGTTTCTGTATGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEVMYPE*FLYDKV
Trigger: GACCTTGTCATACAGAAACCACTCCGGATACATCAC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGCTCCTCCCATGAAGTaGATAATACTTCCACTCCTT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEAPPMK*IILPLL
Trigger: AAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGCCCCACCAGGTGGTaGACAACTCCTGAATGGCCT +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVACPTRW*TTPEWP
Trigger: AGGCCATTCAGGAGTTGTCCACCACCTGGTGGGGCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAVSRTA*DPWISA
Trigger: AGCACTGATCCATGGGTCCCAAGCAGTACGGGACAC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGAGACGTGGGGCAAGTaGAAAAGAATCTCTGCAATA +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKETWGK*KRISAI
Trigger: TATTGCAGAGATTCTTTTCCACTTGCCCCACGTCTC...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCAGTCCACGGGGGTCATaGGCAACATTCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNISPRGS*ATFRYV
Trigger: GACATACCTGAATGTTGCCCATGACCCCCGTGGACT...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGCCCATAACAAGGTGTaGCCTGTGGCTGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAAHNKV*PVAVLN
Trigger: GTTCAGCACAGCCACAGGCCACACCTTGTTATGGGC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGGTCTGGAGAGGAGATaGCTTCTGAGGCCCATAACA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAGLERR*LLRPIT
Trigger: TGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGCTGTGTTAGAAGCTaGCCACTACCATGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRSCVRS*PLPCRV
Trigger: TACTCGGCATGGTAGTGGCCAGCTTCTAACACAGCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACTGAGGCAATTCGGGTaGGGAGGTTCACGCACTCAC +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVALRQFG*GGSRTH
Trigger: GTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATTCTCCACGGTCCCCTaGCACAGGAAGACAAGTCCG +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAFSTVP*HRKTSP
Trigger: CGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAAGTCAGAGCTAGCGTaGCTGCGACTCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARKSELA*LRLLCG
Trigger: CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCAGCTCAGGCCTAAGATaGTTGTGTTCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNISSGLR*LCSVAR
Trigger: CCTGGCCACAGAACACAACCATCTTAGGCCTGAGCT...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACGGAGCCGCAGGTCCTaGTACAATACTTGGTGTTAC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTRSRRS*YNTWCY
Trigger: GTAACACCAAGTATTGTACCAGGACCTGCGGCTCCG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAAGACGCCTTAGTTTATaGATCTTGGTTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGERRLSL*ILVPRA
Trigger: TGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCT...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAACTGGGACTGAATGGTaGTGTATCCGGAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTTGTEW*CIRSGF
Trigger: GAAACCACTCCGGATACATCACCATTCAGTCCCAGT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGACTGGGACTGAATGGTaGTGTATCCGGAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARTGTEW*CIRSGF
Trigger: GAAACCACTCCGGATACATCACCATTCAGTCCCAGT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACAGAACAGAGTTTCATaGGATGCTCGTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTQNRVS*DARCSS
Trigger: GGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGGGGATTTATTTCTCTaGTGTGCTCCCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIGDLFL*CAPSAV
Trigger: CACTGCACTGGGAGCACATCAGAGAAATAAATCCCC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGGGGATTTATTTCTCTaGTGTGCTCCCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARGDLFL*CAPSAV
Trigger: CACTGCACTGGGAGCACATCAGAGAAATAAATCCCC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGGGGATTTATTTCTCTaGTGTGCTCCCAGTGCAGTG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTGDLFL*CAPSAV
Trigger: CACTGCACTGGGAGCACATCAGAGAAATAAATCCCC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGACATGGCTCCCATTTTaGAGGGAGGTCTCCATGTGG +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARTWLPF*REVSMW
Trigger: CCACATGGAGACCTCCCTTCAAAATGGGAGCCATGT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCCGACCTTCCTGGATTaGAGTGCACACTCATGGACT +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESPTFLD*SAHSWT
Trigger: AGTCCATGAGTGTGCACTTCAATCCAGGAAGGTCGG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCTGCTCAGACTCGGCATaGGAACAAAACCGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKACSDSA*EQNRNS
Trigger: ACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCA...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGAGCATACAGCCAAGTTaGATGAGGACAATGATGTGT +
Preference number: 4 (lower is better)
Translates to: RERWQHLADLADFALAMKSIQPS*MRTMMC
Trigger: ACACATCATTGTCCTCATTCAACTTGGCTGTATGCT...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGGTATCATTCCTGAGTaGGGTCCCAGGAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIGIIPE*GPRRLE
Trigger: TTCAAGTCTCCTGGGACCTCACTCAGGAATGATACC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGGTATCATTCCTGAGTaGGGTCCCAGGAGACTTGAA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAGIIPE*GPRRLE
Trigger: TTCAAGTCTCCTGGGACCTCACTCAGGAATGATACC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAAGGGGGTATCATTCCTaGGTGAGGTCCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVARGYHS*VRSQET
Trigger: AGTCTCCTGGGACCTCACTCAGGAATGATACCCCCT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGACTTCGCGCTGGCCATaGAGGATACGCTCACCAACA +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQTSRWP*RIRSPT
Trigger: TGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTCTAGCCTTTCCAAGTaGGCTAAAACACCCAGGCCA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARSSLSK*AKTPRP
Trigger: TGGCCTGGGTGTTTTAGCTCACTTGGAAAGGCTAGA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGGACTCCAATGTCCTTaGTTCTCCCTTCTAGCTCAC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTGLQCP*FSLLAH
Trigger: GTGAGCTAGAAGGGAGAAGCAAGGACATTGGAGTCC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260662.2
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAACTCTGAAGCCGGTCTaGCTGGTACTTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVATLKPV*LVLPPR
Trigger: TCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATGAATGGCCTCGAGCCTaGAACAGTCCAAACCGGAAG +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHEWPRA*NSPNRK
Trigger: CTTCCGGTTTGGACTGTTGCAGGCTCGAGGCCATTC...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATACAAAACCGGAACAGTaGTTTCCCACGTGCCCCTGC +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHTKPEQ*FPTCPC
Trigger: GCAGGGGCACGTGGGAAAGCACTGTTCCGGTTTTGT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGCTGGCCACTACCATaGCGAGTAAATCTGCATATG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRSWPLP*RVNLHM
Trigger: CATATGCAGATTTACTCGGCATGGTAGTGGCCAGCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAATTGCCCAGTCTTTaGCTAGACCTGCTACGTGAA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRQLPSL*LDLLRE
Trigger: TTCACGTAGCAGGTCTAGGCAAAGACTGGGCAATTG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCATGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAWTTPE*PRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCA...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGTGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKWTTPE*PRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCA...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVATAWDP*ISARLQ
Trigger: TTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGACTGCTTGGGACCCATaGATCAGTGCTCGGCTCCAA +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQTAWDP*ISARLQ
Trigger: TTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAGTGTCCCGTACTGCTTaGGACCCATGGATCAGTGCT +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAVSRTA*DPWISA
Trigger: AGCACTGATCCATGGGTCCCAAGCAGTACGGGACAC...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACAGAAGAGCAGGCAGTaGCAGTTTCCAGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTQKSRQ*QFPGNS
Trigger: ACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGCCAGAGGCAGAGACGTaGGGCAAGTGGAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARPEAET*GKWKRI
Trigger: GATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGG...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCAGTCCACGGGGGTCATaGGCAACATTCAGGTATGTC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESSPRGS*ATFRYV
Trigger: GACATACCTGAATGTTGCCCATGACCCCCGTGGACT...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACAGGCGGGGTTCTGGCTaGGGTCATCGGAGCCCGGAA +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNRRGSG*GHRSPE
Trigger: TTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCT...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGGCCCATAACAAGGTGTaGCCTGTGGCTGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEAHNKV*PVAVLN
Trigger: GTTCAGCACAGCCACAGGCCACACCTTGTTATGGGC...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCAGCTGTGTTAGAAGCTaGCCACTACCATGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKASCVRS*PLPCRV
Trigger: TACTCGGCATGGTAGTGGCCAGCTTCTAACACAGCT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRAREAWPA*LRSEFV
Trigger: CACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACAGCGCTGGCAGCACCTaGCTGACCTGGCCGACTTCG +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNSAGST*LTWPTS
Trigger: CGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCT...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGAGCTCAGGCCTAAGATaGTTGTGTTCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKSSGLR*LCSVAR
Trigger: CCTGGCCACAGAACACAACCATCTTAGGCCTGAGCT...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACTGAGGCCTGTAAAATaGTATGCCTGCAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTLRPVK*YACRMA
Trigger: AGCCATTCTGCAGGCATATCATTTTACAGGCCTCAG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACCTCAAAAGCAGTACTaGTGCAGACACAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTPQKQY*CRHKLL
Trigger: GAGGAGTTTGTGTCTGCATCAGTACTGCTTTTGAGG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAAATGAAGACTGGGACTaGATGGTGATGTATCCGGAG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTNEDWD*MVMYPE
Trigger: CTCCGGATACATCACCATTCAGTCCCAGTCTTCATT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCATCTCTTCCAGGGGAATaGAGACTGGGACTGAATGGT +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPASLPGE*RLGLNG
Trigger: ACCATTCAGTCCCAGTCTTCATTCCCCTGGAAGAGA...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGTACTCGCAGAGACTaGACAGGAAGTGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQGTRRD*TGSAGC
Trigger: ACATCCAGCACTTCCTGTTCAGTCTCTGCGAGTACC...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCTTGACATGTCACGGTaGCGTCAGTGGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQLDMSR*RQWEEL
Trigger: CAACTCTTCCCACTGACGTCACCGTGACATGTCAAG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGAATACTTCCACTCCTTaGCATGTCACGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARNTSTP*HVTVTS
Trigger: TGACGTCACCGTGACATGTCAAGGAGTGGAAGTATT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCCGACCTTCCTGGATTaGAGTGCACACTCATGGACT +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQPTFLD*SAHSWT
Trigger: AGTCCATGAGTGTGCACTTCAATCCAGGAAGGTCGG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCCTTCTAATACCTTGTaGTCTGTCTCAGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAPSNTL*SVSVAS
Trigger: AGACGCCACTGAGACAGATCACAAGGTATTAGAAGG...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCCTTCTAATACCTTGTaGTCTGTCTCAGTGGCGTCT +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARPSNTL*SVSVAS
Trigger: AGACGCCACTGAGACAGATCACAAGGTATTAGAAGG...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCTGCCTGGCTGAGAAGTaGGTTTGTGATCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKACLAEK*VCDPFP
Trigger: TGGAAATGGATCACAAACTCACTTCTCAGCCAGGCA...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCCAGACGACTCTAGATaGCTAAACCAAAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAPDDSR*LNQKPS
Trigger: GCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGG...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGGAAAAGTAAGGCCTTaGACATCTAGGTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRGKVRP*TSRCRE
Trigger: TTCCCTACACCTAGATGTTCAAGGCCTTACTTTTCC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCCTAGACCTGCTACGTaGACTTTGTCACAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESPRPAT*TLSQWQ
Trigger: TTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACAAACAAGGACAACCTaGCAAAACCTAAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTQTRTT*QNLRTR
Trigger: CCTGGTCCTTAGGTTTTGTCAGGTTGTCCTTGTTTG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCCTGATGTGCTCCCAGTaGAGTGAAAACAATCTATTA +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRLMCSQ*SENNLL
Trigger: TAATAGATTGTTTTCACTGCACTGGGAGCACATCAG...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTTTATTTCTCTGATGTaGTCCCAGTGCAGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRFISLM*SQCSEN
Trigger: GTTTTCACTGCACTGGGAGCACATCAGAGAAATAAA...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACTTCCTGGATTGAAGTaGACACTCATGGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRLPGLK*TLMDFR
Trigger: CCTAAAGTCCATGAGTGTGCACTTCAATCCAGGAAG...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAAGCTGGCCACTACCATaGCGAGTAAATCTGCATATG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTSWPLP*RVNLHM
Trigger: CATATGCAGATTTACTCGGCATGGTAGTGGCCAGCT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCAGGTCCGTCTCCTCTaGTCAATTGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEQVRLL*SIAQSL
Trigger: CAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCCCCCTAAGGCTCTGTaGTTTCATAGGAACTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKPPKAL*FHRNWR
Trigger: TCTCCAGTTCCTATGAAAGCACAGAGCCTTAGGGGG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCTAAAACACCTCCTTTaGACTCGCCATCTGGACGTA +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNILKHLL*TRHLDV
Trigger: TACGTCCAGATGGCGAGTCCAAAGGAGGTGTTTTAG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR CCA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGGAAGTGCTGGATGTTaGTCTGTAAATATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLGSAGC*SVNILQ
Trigger: CTGCAAAATATTTACAGACCAACATCCAGCACTTCC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGAAGGACTGACCCCCTaGATCCAGTTTGTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGREGLTP*IQFVSK
Trigger: TTTACTTACAAACTGGATCCAGGGGGTCAGTCCTTC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCAAGTCCCGACCTTCCTaGATTGAAGTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAKSRPS*IEVHTH
Trigger: ATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGGAAGGGCTTGGCCCTaGGAGGTTTGGGGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNGRAWP*EVWGVS
Trigger: GGACACTCCCCAAACCTCCCAGGGCCAAGCCCTTCC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTGTCTCAGTGGCGTCTaGCAGAAAAGCTCCACGAAA +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESCLSGV*QKSSTK
Trigger: TTTCGTGGAGCTTTTCTGCCAGACGCCACTGAGACA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCATGTCTCAGTGGCGTCTaGCAGAAAAGCTCCACGAAA +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPACLSGV*QKSSTK
Trigger: TTTCGTGGAGCTTTTCTGCCAGACGCCACTGAGACA...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCCAGAGGCAGAGACGTaGGGCAAGTGGAAAAGAATC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEPEAET*GKWKRI
Trigger: GATTCTTTTCCACTTGCCCCACGTCTCTGCCTCTGG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQEAWPA*LRSEFV
Trigger: CACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTC...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGTTACAATAGAAGCTTaGCCTGCCTGGCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKAVTIEA*PAWLRS
Trigger: ACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAAC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ACAAGTCCGAGAGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGCTTTCATAGGAACTaGAGAGCAATTGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: TSPRESAGSTWLTWPTSRCFHRN*RAIVNK
Trigger: CTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCA...GCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCTCTCGGACTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAATGCTTTCATAGGAACTaGAGAGCAATTGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGECFHRN*RAIVNK
Trigger: CTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCA...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATAGCTCAGGCCTAAGATaGTTGTGTTCTGTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHSSGLR*LCSVAR
Trigger: CCTGGCCACAGAACACAACCATCTTAGGCCTGAGCT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCCTCAAAAGCAGTACTaGTGCAGACACAAACTCCTC +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKPQKQY*CRHKLL
Trigger: GAGGAGTTTGTGTCTGCATCAGTACTGCTTTTGAGG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGGAGTGGTTTCTGTATaGCAAGGTCCACAAAATAGG +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTGVVSV*QGPQNR
Trigger: CCTATTTTGTGGACCTTGTCATACAGAAACCACTCC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGGAGTGGTTTCTGTATaGCAAGGTCCACAAAATAGG +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARGVVSV*QGPQNR
Trigger: CCTATTTTGTGGACCTTGTCATACAGAAACCACTCC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATACTGGGACTGAATGGTaGTGTATCCGGAGTGGTTTC +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHTGTEW*CIRSGF
Trigger: GAAACCACTCCGGATACATCACCATTCAGTCCCAGT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTCTCTTCCAGGGGAATaGAGACTGGGACTGAATGGT +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHSLPGE*RLGLNG
Trigger: ACCATTCAGTCCCAGTCTTCATTCCCCTGGAAGAGA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCAGAACAGAGTTTCATaGGATGCTCGTTGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEQNRVS*DARCSS
Trigger: GGAGGAGCAACGAGCATCTCATGAAACTCTGTTCTG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAATGAGGCAAACACTTaGTGCAAGGGCTTCGTACAG +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARNEANT*CKGFVQ
Trigger: CTGTACGAAGCCCTTGCATCAAGTGTTTGCCTCATT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGACAGGCCTGCTCTTTaGAAGGAGTTAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARDRPAL*KELRSP
Trigger: AGGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCCAGACGACTCTAGATaGCTAAACCAAAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESPDDSR*LNQKPS
Trigger: GCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGCAGTGAGCGGCCCCTaGCACTTTCTCCACGGTCCC +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTAVSGP*HFLHGP
Trigger: GGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGGAAAAGTAAGGCCTTaGACATCTAGGTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARGKVRP*TSRCRE
Trigger: TTCCCTACACCTAGATGTTCAAGGCCTTACTTTTCC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCCTAGACCTGCTACGTaGACTTTGTCACAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEPRPAT*TLSQWQ
Trigger: TTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACCTAGACCTGCTACGTaGACTTTGTCACAGTGGCAA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAPRPAT*TLSQWQ
Trigger: TTGCCACTGTGACAAAGTTCACGTAGCAGGTCTAGG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTGCTTATCACCTAGTTaGGGGATCCAAACAAGGACA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARCLSPS*GIQTRT
Trigger: TGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTACGCTGGCTCGCCGGTaGCGCACCACAGCCCTCAGC +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCTLARR*RTTALS
Trigger: GCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGT...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTACATTGGCAATACATaGTTTCACGCTGGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHYIGNT*FHAGSP
Trigger: CGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGTCAGTGGGAAGAGTTaGTGTGAGGTCCTTATACAG +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAVSGKS*CEVLIQ
Trigger: CTGTATAAGGACCTCACAGCAACTCTTCCCACTGAC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCAGTGCTTTCCCACGTaGCCCTGCCTCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTQCFPT*PCLPPW
Trigger: CCAGGGTGGGAGGCAGGGGCACGTGGGAAAGCACTG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGCGGGATCTGCTCACTTaGGTCTCTAGCCTTTCCAAG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGRDLLT*VSSLSK
Trigger: CTTGGAAAGGCTAGAGACCCAAGTGAGCAGATCCCG...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAATTAGTTTATGAATCTTaGTTCCAAGAGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGELVYES*FQEHLP
Trigger: AGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGGTTGGGTTCTACATTaGCAATACATGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIGWVLH*QYMLSR
Trigger: GCGTGAAAGCATGTATTGCCAATGTAGAACCCAACC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCGTGATGTATCCGGAGTaGTTTCTGTATGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNIVMYPE*FLYDKV
Trigger: GACCTTGTCATACAGAAACCACTCCGGATACATCAC...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGAAGGACTGACCCCCTaGATCCAGTTTGTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTEGLTP*IQFVSK
Trigger: TTTACTTACAAACTGGATCCAGGGGGTCAGTCCTTC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAAAGTCCCGACCTTCCTaGATTGAAGTGCACACTCAT +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAKSRPS*IEVHTH
Trigger: ATGAGTGTGCACTTCAATCCAGGAAGGTCGGGACTT...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGTGGACAACTCCTGAATaGCCTCGAGCCTGCAACAGT +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGWTTPE*PRACNS
Trigger: ACTGTTGCAGGCTCGAGGCCATTCAGGAGTTGTCCA...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGGAGACGTGGGGCAAGTaGAAAAGAATCTCTGCAATA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARETWGK*KRISAI
Trigger: TATTGCAGAGATTCTTTTCCACTTGCCCCACGTCTC...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGGTCTGGAGAGGAGATaGCTTCTGAGGCCCATAACA +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGGLERR*LLRPIT
Trigger: TGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAGCTGTGTTAGAAGCTaGCCACTACCATGCCGAGTA +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQSCVRS*PLPCRV
Trigger: TACTCGGCATGGTAGTGGCCAGCTTCTAACACAGCT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGTTACAATAGAAGCTTaGCCTGCCTGGCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARVTIEA*PAWLRS
Trigger: ACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAAC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGTTACAATAGAAGCTTaGCCTGCCTGGCTGAGAAGT +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAVTIEA*PAWLRS
Trigger: ACTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAAC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAGCACCTGGCTGACCTaGCCGACTTCGCGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTSTWLT*PTSRWP
Trigger: TGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTCTAGCCTTTCCAAGTaGGCTAAAACACCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESSSLSK*AKTPPL
Trigger: CAAAGGAGGTGTTTTAGCTCACTTGGAAAGGCTAGA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCAGACGCCTTAGTTTATaGATCTTGGTTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKARRLSL*ILVPRA
Trigger: TGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGATGCTTCTTGCTCATTaGTCTCCACTGTTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARMLLAH*SPLFGW
Trigger: CCAACCAAACAGTGGAGATCAATGAGCAAGAAGCAT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGAATGAAGACTGGGACTaGATGGTGATGTATCCGGAG +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQNEDWD*MVMYPE
Trigger: CTCCGGATACATCACCATTCAGTCCCAGTCTTCATT...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGGGAAGAGTTGCTGTaGGGTCCTTATACAGCAATC +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAWEELL*GPYTAI
Trigger: GATTGCTGTATAAGGACCTCACAGCAACTCTTCCCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAATACTTCCACTCCTTaGCATGTCACGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGENTSTP*HVTVTS
Trigger: TGACGTCACCGTGACATGTCAAGGAGTGGAAGTATT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATAATACTTCCACTCCTTaGCATGTCACGGTGACGTCA +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHNTSTP*HVTVTS
Trigger: TGACGTCACCGTGACATGTCAAGGAGTGGAAGTATT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAATGAGGCAAACACTTaGTGCAAGGGCTTCGTACAG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGENEANT*CKGFVQ
Trigger: CTGTACGAAGCCCTTGCATCAAGTGTTTGCCTCATT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGTGCTCCCAGTGCAGTaGAAACAATCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESVLPVQ*KQSIRR
Trigger: TCTCCTAATAGATTGTTTTCACTGCACTGGGAGCAC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGATAAACAGGAGATGTaGTTTCCACCCTCCAATAGC +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARDKQEM*FPPSNS
Trigger: GCTATTGGAGGGTGGAAATCACATCTCCTGTTTATC...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGCCTGGCTGAGAAGTaGGTTTGTGATCCATTTCCA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVACLAEK*VCDPFP
Trigger: TGGAAATGGATCACAAACTCACTTCTCAGCCAGGCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCAACCAAAAACCCAGCTaGTGTGATGATCCGACTATA +
Preference number: 4 (lower is better)
Translates to: LADLADFALAMKDTLTNINQKPS*CDDPTI
Trigger: TATAGTCGGATCATCACATCAGCTGGGTTTTTGGTT...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGAACCAAAAACCCAGCTaGTGTGATGATCCGACTATA +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARNQKPS*CDDPTI
Trigger: TATAGTCGGATCATCACATCAGCTGGGTTTTTGGTT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCAAACAAGGACAACCTaGCAAAACCTAAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEQTRTT*QNLRTR
Trigger: CCTGGTCCTTAGGTTTTGTCAGGTTGTCCTTGTTTG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGAAATAGGGTTTATTaGGAAAGTTCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRRNRVY*ESSASR
Trigger: TCTGCTTGCCGAACTTTCTCAATAAACCCTATTTCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGTACATTGGCAATACATaGTTTCACGCTGGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGYIGNT*FHAGSP
Trigger: CGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCACAGTGGGTTTCTCTaGAAGGGCCCAGTCAGGAGG +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNHSGFL*KGPVRR
Trigger: CCTCCTGACTGGGCCCTTGCAGAGAAACCCACTGTG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAGTCAGTGGGAAGAGTTaGTGTGAGGTCCTTATACAG +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAVSGKS*CEVLIQ
Trigger: CTGTATAAGGACCTCACAGCAACTCTTCCCACTGAC...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATGTCAGTGGGAAGAGTTaGTGTGAGGTCCTTATACAG +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHVSGKS*CEVLIQ
Trigger: CTGTATAAGGACCTCACAGCAACTCTTCCCACTGAC...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAAGCTGGCCACTACCATaGCGAGTAAATCTGCATATG +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVASWPLP*RVNLHM
Trigger: CATATGCAGATTTACTCGGCATGGTAGTGGCCAGCT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCTTCCCAGACAGGCCTaGTCTTTGAAAGGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGELPRQA*SLKGVK
Trigger: CTTAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACAATTGCCCAGTCTTTaGCTAGACCTGCTACGTGAA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAQLPSL*LDLLRE
Trigger: TTCACGTAGCAGGTCTAGGCAAAGACTGGGCAATTG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGGTTGGGTTCTACATTaGCAATACATGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKGWVLH*QYMLSR
Trigger: GCGTGAAAGCATGTATTGCCAATGTAGAACCCAACC...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTCTCCACTGTTTGGTTaGGTTCTACATTGGCAATAC +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARSPLFG*VLHWQY
Trigger: GTATTGCCAATGTAGAACCCAACCAAACAGTGGAGA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCTTGATCTCCACTGTTTaGTTGGGTTCTACATTGGCA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKALISTV*LGSTLA
Trigger: TGCCAATGTAGAACCCAACCAAACAGTGGAGATCAA...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGGAAGTGCTGGATGTTaGTCTGTAAATATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRGSAGC*SVNILQ
Trigger: CTGCAAAATATTTACAGACCAACATCCAGCACTTCC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGAAGGACTGACCCCCTaGATCCAGTTTGTAAGTAAA +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESEGLTP*IQFVSK
Trigger: TTTACTTACAAACTGGATCCAGGGGGTCAGTCCTTC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCACTGCCCCACCAGGTaGTGGACAACTCCTGAATGG +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNHCPTR*WTTPEW
Trigger: CCATTCAGGAGTTGTCCACCACCTGGTGGGGCAGTG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCACGGGTGGAAGGGCTTaGCCCTGGGAGGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTTGGRA*PWEVWG
Trigger: TCCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGTGTGATCTGTCTCAGTaGCGTCTGGCAGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGCDLSQ*RLAEKL
Trigger: GAGCTTTTCTGCCAGACGCCACTGAGACAGATCACA...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGTCCAGTGGCACAGCTaGCACGTGCTCAGACTCGGC +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAVQWHS*HVLRLG
Trigger: GCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGAC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAACATTAGGAGCTTTGTaGTACAGGTCTGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVATLGAL*YRSGEE
Trigger: CTCCTCTCCAGACCTGTACCACAAAGCTCCTAATGT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGAGTGGTTTCTGTATaGCAAGGTCCACAAAATAGG +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQGVVSV*QGPQNR
Trigger: CCTATTTTGTGGACCTTGTCATACAGAAACCACTCC...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATGTGCTCCCAGTGCAGTaGAAACAATCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHVLPVQ*KQSIRR
Trigger: TCTCCTAATAGATTGTTTTCACTGCACTGGGAGCAC...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGTGCTCCCAGTGCAGTaGAAACAATCTATTAGGAGA +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQVLPVQ*KQSIRR
Trigger: TCTCCTAATAGATTGTTTTCACTGCACTGGGAGCAC...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCCACAAAATCTGGGCTaGAGTTCTAGATGCATATGG +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQPQNLG*SSRCIW
Trigger: CCATATGCATCTAGAACTTCAGCCCAGATTTTGTGG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCTCCCACCCTGGCCCTaGACAGTAAGTCCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTLPPWP*TVSPEA
Trigger: TGCCTCTGGACTTACTGTTCAGGGCCAGGGTGGGAG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGGTTGCTGTGCCTGCTaGGGACATGGCTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAGCCAC*GHGFPD
Trigger: GTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCAGAAATAGGGTTTATTaGGAAAGTTCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: SRTAWDPWISARLQPPKARNRVY*ESSASR
Trigger: TCTGCTTGCCGAACTTTCTCAATAAACCCTATTTCT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAAGACTGAACAGGAAGTaGTGGATGTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPARLNRK*WMLVCK
Trigger: TTTACAGACCAACATCCAGCACTTCCTGTTCAGTCT...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGAGACTGAACAGGAAGTaGTGGATGTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARRLNRK*WMLVCK
Trigger: TTTACAGACCAACATCCAGCACTTCCTGTTCAGTCT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTTTATTTCTCTGATGTaGTCCCAGTGCAGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: WEVWGVSRTAWDPWISARFISLM*SQCSEN
Trigger: GTTTTCACTGCACTGGGAGCACATCAGAGAAATAAA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGCTTCCTGGATTGAAGTaGACACTCATGGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGELPGLK*TLMDFR
Trigger: CCTAAAGTCCATGAGTGTGCACTTCAATCCAGGAAG...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTCAGTGCTTTCCCACGTaGCCCTGCCTCCCACCCTGG +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCQCFPT*PCLPPW
Trigger: CCAGGGTGGGAGGCAGGGGCACGTGGGAAAGCACTG...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCATACATGCTTTCACGCTaGCTCGCCGGTGCCGCACCA +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAYMLSR*LAGAAP
Trigger: TGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTA...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCTCTCCACTGTTTGGTTaGGTTCTACATTGGCAATAC +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESSPLFG*VLHWQY
Trigger: GTATTGCCAATGTAGAACCCAACCAAACAGTGGAGA...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGTTGATCTCCACTGTTTaGTTGGGTTCTACATTGGCA +
Preference number: 4 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARLISTV*LGSTLA
Trigger: TGCCAATGTAGAACCCAACCAAACAGTGGAGATCAA...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAGCTCCTCCCATGAAGTaGATAATACTTCCACTCCTT +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAAPPMK*IILPLL
Trigger: AAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGC...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGGAGGGTGGCAGAGCTaGGACAAAGCTGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTGGWQS*DKAAFA
Trigger: GGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCTCC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAAGTTCTAGATGCATATaGCCTACCTTTGGGTATGAA +
Preference number: 4 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTSSRCI*PTFGYE
Trigger: TTCATACCCAAAGGTAGGCCATATGCATCTAGAACT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGACATTAGGAGCTTTGTaGTACAGGTCTGGAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGTLGAL*YRSGEE
Trigger: CTCCTCTCCAGACCTGTACCACAAAGCTCCTAATGT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGATGCTTCTTGCTCATTaGTCTCCACTGTTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGMLLAH*SPLFGW
Trigger: CCAACCAAACAGTGGAGATCAATGAGCAAGAAGCAT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCTTGACATGTCACGGTaGCGTCAGTGGGAAGAGTTG +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNLDMSR*RQWEEL
Trigger: CAACTCTTCCCACTGACGTCACCGTGACATGTCAAG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGAGCATACAGCCAAGTTaGATGAGGACAATGATGTGT +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGESIQPS*MRTMMC
Trigger: ACACATCATTGTCCTCATTCAACTTGGCTGTATGCT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATAACCAAAAACCCAGCTaGTGTGATGATCCGACTATA +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHNQKPS*CDDPTI
Trigger: TATAGTCGGATCATCACATCAGCTGGGTTTTTGGTT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAAGAAATAGGGTTTATTaGGAAAGTTCGGCAAGCAGA +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPARNRVY*ESSASR
Trigger: TCTGCTTGCCGAACTTTCTCAATAAACCCTATTTCT...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCCCAGTCAGGAGGGCTaGAAAGTCACTCTGAAGCCG +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTPSQEG*KVTLKP
Trigger: CGGCTTCAGAGTGACTTTGCAGCCCTCCTGACTGGG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCCTGATGTGCTCCCAGTaGAGTGAAAACAATCTATTA +
Preference number: 4 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESLMCSQ*SENNLL
Trigger: TAATAGATTGTTTTCACTGCACTGGGAGCACATCAG...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGCCCCTCTGTCACACTaGCCCACCAGGTGGTGGACA +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCAPLSH*PTRWWT
Trigger: TGTCCACCACCTGGTGGGGCAGTGTGACAGAGGGGC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGGGAGTGTCCCGTACTaGTTGGGACCCATGGATCAG +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTGSVPY*LGPMDQ
Trigger: CTGATCCATGGGTCCCAAGCAGTACGGGACACTCCC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTCCAAGAGCACCTTCCTaGGCCTGCACGCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCPRAPS*ACTLCS
Trigger: GCTGCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGG...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGTTGATCTCCACTGTTTaGTTGGGTTCTACATTGGCA +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQLISTV*LGSTLA
Trigger: TGCCAATGTAGAACCCAACCAAACAGTGGAGATCAA...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGGCTCCTCCCATGAAGTaGATAATACTTCCACTCCTT +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGAPPMK*IILPLL
Trigger: AAGGAGTGGAAGTATTATCCACTTCATGGGAGGAGC...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAAGTTCTAGATGCATATaGCCTACCTTTGGGTATGAA +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPASSRCI*PTFGYE
Trigger: TTCATACCCAAAGGTAGGCCATATGCATCTAGAACT...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGAAGCTTGGCCTGCCTaGCTGAGAAGTGAGTTTGTG +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNEAWPA*LRSEFV
Trigger: CACAAACTCACTTCTCAGCCAGGCAGGCCAAGCTTC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACTCTCTTCCAGGGGAATaGAGACTGGGACTGAATGGT +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNSLPGE*RLGLNG
Trigger: ACCATTCAGTCCCAGTCTTCATTCCCCTGGAAGAGA...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAGGGGGTATCATTCCTaGGTGAGGTCCCAGGAGACT +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTRGYHS*VRSQET
Trigger: AGTCTCCTGGGACCTCACTCAGGAATGATACCCCCT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGGTTGCTGTGCCTGCTaGGGACATGGCTTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCGCCAC*GHGFPD
Trigger: GTCTGGGAAGCCATGTCCTCAGCAGGCACAGCAACC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACACTGTTTACGGGATCTaGTCACTTGGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNTVYGI*SLGSLA
Trigger: GGCTAGAGACCCAAGTGAGCAGATCCCGTAAACAGT...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGTCTTCCAATGCTTCTTaGTCATTGATCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQSSNAS*SLISTV
Trigger: AACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGA...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTCTTCCAATGCTTCTTaGTCATTGATCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHSSNAS*SLISTV
Trigger: AACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGAGACTGAACAGGAAGTaGTGGATGTTGGTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGRLNRK*WMLVCK
Trigger: TTTACAGACCAACATCCAGCACTTCCTGTTCAGTCT...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACTGATGTGCTCCCAGTaGAGTGAAAACAATCTATTA +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVALMCSQ*SENNLL
Trigger: TAATAGATTGTTTTCACTGCACTGGGAGCACATCAG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATTTATTTCTCTGATGTaGTCCCAGTGCAGTGAAAAC +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVAFISLM*SQCSEN
Trigger: GTTTTCACTGCACTGGGAGCACATCAGAGAAATAAA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGTTAGTTTATGAATCTTaGTTCCAAGAGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKLVYES*FQEHLP
Trigger: AGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGTCTCCACTGTTTGGTTaGGTTCTACATTGGCAATAC +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGSPLFG*VLHWQY
Trigger: GTATTGCCAATGTAGAACCCAACCAAACAGTGGAGA...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGATATGCCTGCAGAATaGCTTTCACATTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: FNNFMLRIGEHPQLACPADMPAE*LSHFPI
Trigger: AATTGGAAAATGTGAAAGCCATTCTGCAGGCATATC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGGAGGGTGGCAGAGCTaGGACAAAGCTGCCTTTGCC +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCGGWQS*DKAAFA
Trigger: GGCAAAGGCAGCTTTGTCCCAGCTCTGCCACCCTCC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACTGTGATCTGTCTCAGTaGCGTCTGGCAGAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNCDLSQ*RLAEKL
Trigger: GAGCTTTTCTGCCAGACGCCACTGAGACAGATCACA...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAAGTCAGAGCTAGCGTaGCTGCGACTCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTKSELA*LRLLCG
Trigger: CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATGCTTTCATAGGAACTaGAGAGCAATTGTCAACAAG +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVACFHRN*RAIVNK
Trigger: CTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCTGAGGCCTGTAAAATaGTATGCCTGCAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNLRPVK*YACRMA
Trigger: AGCCATTCTGCAGGCATATCATTTTACAGGCCTCAG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACAGGTCCCAGGAGACTTaGAATACCAGCTGTGTTAGA +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNRSQET*NTSCVR
Trigger: TCTAACACAGCTGGTATTTCAAGTCTCCTGGGACCT...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCCAGACGACTCTAGATaGCTAAACCAAAAACCCAGC +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNPDDSR*LNQKPS
Trigger: GCTGGGTTTTTGGTTTAGTCATCTAGAGTCGTCTGG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCACAGGGCAAGGAGACCTaGAAGACCTTTAGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAQGKET*KTFSPD
Trigger: GTCTGGACTAAAGGTCTTTCAGGTCTCCTTGCCCTG...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACCAAACAAGGACAACCTaGCAAAACCTAAGGACCAGG +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNQTRTT*QNLRTR
Trigger: CCTGGTCCTTAGGTTTTGTCAGGTTGTCCTTGTTTG...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGGATATGCCTGCAGAATaGCTTTCACATTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: QFPGNSAATQVTMAILGEDMPAE*LSHFPI
Trigger: AATTGGAAAATGTGAAAGCCATTCTGCAGGCATATC...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAGATATGCCTGCAGAATaGCTTTCACATTTTCCAATT +
Preference number: 4 (lower is better)
Translates to: SRMESTGVMGNIQVCPVADMPAE*LSHFPI
Trigger: AATTGGAAAATGTGAAAGCCATTCTGCAGGCATATC...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGGTCTGGAGAGGAGATaGCTTCTGAGGCCCATAACA +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTGLERR*LLRPIT
Trigger: TGTTATGGGCCTCAGAAGCCATCTCCTCTCCAGACC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCTGCTCAGACTCGGCATaGGAACAAAACCGGAACAGT +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTCSDSA*EQNRNS
Trigger: ACTGTTCCGGTTTTGTTCTCATGCCGAGTCTGAGCA...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTACTTCGCGCTGGCCATaGAGGATACGCTCACCAACA +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCTSRWP*RIRSPT
Trigger: TGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGT...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGGAAAAGTAAGGCCTTaGACATCTAGGTGTAGGGAA +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNGKVRP*TSRCRE
Trigger: TTCCCTACACCTAGATGTTCAAGGCCTTACTTTTCC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACTGCTTATCACCTAGTTaGGGGATCCAAACAAGGACA +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNCLSPS*GIQTRT
Trigger: TGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCA...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCACTGTTTACGGGATCTaGTCACTTGGGTCTCTAGCC +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTTVYGI*SLGSLA
Trigger: GGCTAGAGACCCAAGTGAGCAGATCCCGTAAACAGT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTACTCTGAAGCCGGTCTaGCTGGTACTTCCTCCCAGA +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCTLKPV*LVLPPR
Trigger: TCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGAGT...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGTTAGTTTATGAATCTTaGTTCCAAGAGCACCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGLVYES*FQEHLP
Trigger: AGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAA...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACGGTTGGGTTCTACATTaGCAATACATGCTTTCACGC +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNGWVLH*QYMLSR
Trigger: GCGTGAAAGCATGTATTGCCAATGTAGAACCCAACC...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCAGAAGAGCAGGCAGTaGCAGTTTCCAGGTAACAGT +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTQKSRQ*QFPGNS
Trigger: ACTGTTACCTGGAAACTGCCACTGCCTGCTCTTCTG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCACTGAGGCCTGTAAAATaGTATGCCTGCAGAATGGCT +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDALRPVK*YACRMA
Trigger: AGCCATTCTGCAGGCATATCATTTTACAGGCCTCAG...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCATGGGAAGAGTTGCTGTaGGGTCCTTATACAGCAATC +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAWEELL*GPYTAI
Trigger: GATTGCTGTATAAGGACCTCACAGCAACTCTTCCCA...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGACAGGCCTGCTCTTTaGAAGGAGTTAAGATCACCT +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTDRPAL*KELRSP
Trigger: AGGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTCAGGTCCGTCTCCTCTaGTCAATTGCCCAGTCTTTG +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCQVRLL*SIAQSL
Trigger: CAAAGACTGGGCAATTGAGCAGAGGAGACGGACCTG...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCATGCTTCTTGCTCATTaGTCTCCACTGTTTGGTTGG +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTMLLAH*SPLFGW
Trigger: CCAACCAAACAGTGGAGATCAATGAGCAAGAAGCAT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCCACAAAATCTGGGCTaGAGTTCTAGATGCATATGG +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTPQNLG*SSRCIW
Trigger: CCATATGCATCTAGAACTTCAGCCCAGATTTTGTGG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGATAAACAGGAGATGTaGTTTCCACCCTCCAATAGC +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDADKQEM*FPPSNS
Trigger: GCTATTGGAGGGTGGAAATCACATCTCCTGTTTATC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTTACATTGGCAATACATaGTTTCACGCTGGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCYIGNT*FHAGSP
Trigger: CGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTA...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCACTTCCTGGATTGAAGTaGACACTCATGGACTTTAGG +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDALPGLK*TLMDFR
Trigger: CCTAAAGTCCATGAGTGTGCACTTCAATCCAGGAAG...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGTGATGTATCCGGAGTaGTTTCTGTATGACAAGGTC +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTVMYPE*FLYDKV
Trigger: GACCTTGTCATACAGAAACCACTCCGGATACATCAC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTTGTCTCAGTGGCGTCTaGCAGAAAAGCTCCACGAAA +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCCLSGV*QKSSTK
Trigger: TTTCGTGGAGCTTTTCTGCCAGACGCCACTGAGACA...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACAGTTCTAGATGCATATaGCCTACCTTTGGGTATGAA +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNSSRCI*PTFGYE
Trigger: TTCATACCCAAAGGTAGGCCATATGCATCTAGAACT...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGAGACGTGGGGCAAGTaGAAAAGAATCTCTGCAATA +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTETWGK*KRISAI
Trigger: TATTGCAGAGATTCTTTTCCACTTGCCCCACGTCTC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCCACACTACGACATCTaGGGCAATACAGTCAATGTA +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTPHYDI*GNTVNV
Trigger: TACATTGACTGTATTGCCCCAGATGTCGTAGTGTGG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 72 bp CTAAGGCTCTGTGCTTTCATAGGAACTGGAGAGCAATaGTCAACAAGGGAAACTGAAAGCATGGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LRLCAFIGTGEQ*STRETESMAFR
Trigger: TCTGAAGGCCATGCTTTCAGTTTCCCTTGTTGACAATTGCTCTCCAGTTCCTATGAAAGCACAGAGCCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTAATGAAGACTGGGACTaGATGGTGATGTATCCGGAG +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCNEDWD*MVMYPE
Trigger: CTCCGGATACATCACCATTCAGTCCCAGTCTTCATT...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR GCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTCTTCCCAGACAGGCCTaGTCTTTGAAAGGAGTTAAG +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCLPRQA*SLKGVK
Trigger: CTTAACTCCTTTCAAAGAGCAGGCCTGTCTGGGAAG...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACTCCTGGTACAATACTTaGTGTTACGAAAGGATCTAT +
Preference number: 4 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNSWYNT*CYERIY
Trigger: ATAGATCCTTTCGTAACACCAAGTATTGTACCAGGA...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR GCA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCTCTTCCAATGCTTCTTaGTCATTGATCTCCACTGTT +
Preference number: 4 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTSSNAS*SLISTV
Trigger: AACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGA...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CCA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGGAAGTGCTGGATGTTaGTCTGTAAATATTTTGCAG +
Preference number: 4 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAGSAGC*SVNILQ
Trigger: CTGCAAAATATTTACAGACCAACATCCAGCACTTCC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
3UTR CAA 72 bp ATCTGGGCTGAAGTTCTAGATGCATATGGCCTACCTTaGGGTATGAACCTTCTAATACCTTGTGATCTGTCT +
Preference number: 4 (lower is better)
Translates to: IWAEVLDAYGLP*GMNLLIPCDLS
Trigger: AGACAGATCACAAGGTATTAGAAGGTTCATACCCAAAGGTAGGCCATATGCATCTAGAACTTCAGCCCAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR TCA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTAGACGCCTTAGTTTATaGATCTTGGTTCCAAGAGCA +
Preference number: 4 (lower is better)
Translates to: SWTLGLETSSAFICSWMCRRLSL*ILVPRA
Trigger: TGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCT...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAACACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEHGWKG*ALGGLG
Trigger: CCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTG...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTTGGCCCTGGGAGGTTaGGGGAGTGTCCCGTACTGC +
Preference number: 5 (lower is better)
Translates to: RERWQHLADLADFALAMKLALGG*GSVPYC
Trigger: GCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGCGGCCACCGCGGCCTaGCACACTCACCGCGACCAC +
Preference number: 5 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKAATAA*HTHRDH
Trigger: GTGGTCGCGGTGAGTGTGCAAGGCCGCGGTGGCCGC...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CAA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKHGWKG*ALGGLG
Trigger: CCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTG...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCAACTGGTAGCGCAGGCTaGTCACGCGGCCACCGCGGC +
Preference number: 5 (lower is better)
Translates to: SRMESTGVMGNIQVCPVATGSAG*SRGHRG
Trigger: GCCGCGGTGGCCGCGTGACAAGCCTGCGCTACCAGT...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CAA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTTGGCCCTGGGAGGTTaGGGGAGTGTCCCGTACTGC +
Preference number: 5 (lower is better)
Translates to: LADLADFALAMKDTLTNILALGG*GSVPYC
Trigger: GCAGTACGGGACACTCCCCAAACCTCCCAGGGCCAA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS GCA 90 bp TTCCCGCCATCCACGTCTTCAAAACCAAACCAACCGGTCCCGGCGTaGTTTGCGATCCTGCCGTACAAAAGCATGGCGGCGCTCAGGGCC +
Preference number: 5 (lower is better)
Translates to: FPPSTSSKPNQPVPA*FAILPYKSMAALRA
Trigger: GGCCCTGAGCGCCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGACGTGGATGGCGGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473476.5
ENST00000473706.5
CDS-3UTR CAA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCGCTAAAACACCTCCTTaGGACTCGCCATCTGGACGT +
Preference number: 5 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLAKTPP*DSPSGR
Trigger: ACGTCCAGATGGCGAGTCCAAAGGAGGTGTTTTAGC...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR CAA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAACTGCTGACCTTCTTCTaGAAGGGGCGGGATAAGCTA +
Preference number: 5 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGELLTFF*KGRDKL
Trigger: TAGCTTATCCCGCCCCTTCAAGAAGAAGGTCAGCAG...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp GAACTTTGTCACAGTGGCAAGTCAGAGCTAGCGTGGCTGCGACTCCTTTGTGGGCACGGGTGGAAGGGCTaGGCCCTGGGAGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ELCHSGKSELAWLRLLCGHGWKG*ALGGLG
Trigger: CCCCAAACCTCCCAGGGCCAAGCCCTTCCACCCGTG...CCCACAAAGGAGTCGCAGCCACGCTAGCTCTGACTTGCCACTGTGACAAAGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGATCAGGCCTAAGATGGTaGTGTTCTGTGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRSGLRW*CSVARP
Trigger: GGGCCTGGCCACAGAACACAACCATCTTAGGCCTGA...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCCGGTCCCGGCGTGCTTaGCGATCCTGCCGTACAAAA +
Preference number: 5 (lower is better)
Translates to: SRTAWDPWISARLQPPKARSRRA*RSCRTK
Trigger: TTTTGTACGGCAGGATCGCAAAGCACGCCGGGACCG...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS CCA 90 bp CAATACTTGGTGTTACGAAAGGATCTATCACAAGCTCCGTTCTCCTaGCCGGCGGGCGCACTGGTAGCGCAGGCTTGTCACGCGGCCACC +
Preference number: 5 (lower is better)
Translates to: QYLVLRKDLSQAPFS*PAGALVAQACHAAT
Trigger: GGTGGCCGCGTGACAAGCCTGCGCTACCAGTGCGCCCGCCGGCCAGGAGAACGGAGCTTGTGATAGATCCTTTCGTAACACCAAGTATTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CAA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACACCATTTCCAGAGGGGTaGCTGTGCCTGCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTPFPEG*LCLLRT
Trigger: TGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGG...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCCCATTTCCAGAGGGGTaGCTGTGCCTGCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: LADLADFALAMKDTLTNIPFPEG*LCLLRT
Trigger: TGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGG...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCTCAGGCCTAAGATGGTaGTGTTCTGTGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: LADLADFALAMKDTLTNISGLRW*CSVARP
Trigger: GGGCCTGGCCACAGAACACAACCATCTTAGGCCTGA...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAGCTAAAACACCTCCTTaGGACTCGCCATCTGGACGT +
Preference number: 5 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRAKTPP*DSPSGR
Trigger: ACGTCCAGATGGCGAGTCCAAAGGAGGTGTTTTAGC...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS TCA 90 bp TGCCGCACCACAGCCCTCAGCTCATCTCGCAGACGCCTTAGTTTATaGATCTTGGTTCCAAGAGCACCTTCCTGGGCCTGCACGCTCTGC +
Preference number: 5 (lower is better)
Translates to: CRTTALSSSRRRLSL*ILVPRAPSWACTLC
Trigger: GCAGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCTGCGAGATGAGCTGAGGGCTGTGGTGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1
CDS-3UTR CAA 90 bp AGAGAGCGCTGGCAGCACCTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGTGGTTGGGTTCTACATaGGCAATACATGCTTTCACG +
Preference number: 5 (lower is better)
Translates to: RERWQHLADLADFALAMKWLGST*AIHAFT
Trigger: CGTGAAAGCATGTATTGCCAATGTAGAACCCAACCA...CTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAGGTGCTGCCAGCGCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCGACATGGCTCCCATTTaGAAGGGAGGTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: SRTAWDPWISARLQPPKADMAPI*KGGLHV
Trigger: CACATGGAGACCTCCCTTCAAAATGGGAGCCATGTC...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHSVPYC*GPMDQC
Trigger: GCACTGATCCATGGGTCCCAAGCAGTACGGGACACT...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp ATGAGGCTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGCCATTTCCAGAGGGGTaGCTGTGCCTGCTGAGGACA +
Preference number: 5 (lower is better)
Translates to: MRLRTTEAIRVGRFTHSQPFPEG*LCLLRT
Trigger: TGTCCTCAGCAGGCACAGCAACCCCTCTGGAAATGG...CTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAGCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCATCAGGCCTAAGATGGTaGTGTTCTGTGGCCAGGCCC +
Preference number: 5 (lower is better)
Translates to: SRMESTGVMGNIQVCPVASGLRW*CSVARP
Trigger: GGGCCTGGCCACAGAACACAACCATCTTAGGCCTGA...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGGCCTTCCCATGAAGTaGTCTAGGCAACCGGTGATA +
Preference number: 5 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAGLPMK*SRQPVI
Trigger: TATCACCGGTTGCCTAGACAACTTCATGGGAAGGCC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR CAA 90 bp AGGACCAGGACCAGGCCCAGCCAAGGTGAAGGGGTCCGCCTCGTGGTCAGACTCATCTCCACTGTTTGGTaGGGTTCTACATTGGCAATA +
Preference number: 5 (lower is better)
Translates to: RTRTRPSQGEGVRLVVRLISTVW*GSTLAI
Trigger: TATTGCCAATGTAGAACCCAACCAAACAGTGGAGAT...GAGTCTGACCACGAGGCGGACCCCTTCACCTTGGCTGGGCCTGGTCCTGGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTGTTACAATAGAAGCTaGGCCTGCCTGGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: WEVWGVSRTAWDPWISARCYNRS*ACLAEK
Trigger: CTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGCTGCCTTTGCCGCTGGGCTTTCCGGGACTGTGGAGGGAGCACAGGCGGGGAAGTCCTGGTACAATACTaGGTGTTACGAAAGGATCTA +
Preference number: 5 (lower is better)
Translates to: SCLCRWAFRDCGGSTGGEVLVQY*VLRKDL
Trigger: TAGATCCTTTCGTAACACCAAGTATTGTACCAGGAC...TTCCCCGCCTGTGCTCCCTCCACAGTCCCGGAAAGCCCAGCGGCAAAGGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS-3UTR CAA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACTGCTGACCTTCTTCTaGAAGGGGCGGGATAAGCTA +
Preference number: 5 (lower is better)
Translates to: SRMESTGVMGNIQVCPVALLTFF*KGRDKL
Trigger: TAGCTTATCCCGCCCCTTCAAGAAGAAGGTCAGCAG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGAGACAGGCCTGCTCTTaGAAAGGAGTTAAGATCACC +
Preference number: 5 (lower is better)
Translates to: WEVWGVSRTAWDPWISARRQACS*KGVKIT
Trigger: GGTGATCTTAACTCCTTTCAAAGAGCAGGCCTGTCT...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CTCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGTGTTACAATAGAAGCTaGGCCTGCCTGGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: LRTTEAIRVGRFTHSQGKCYNRS*ACLAEK
Trigger: CTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACA...CTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAATTGATCTCCACTGTTaGGTTGGGTTCTACATTGGC +
Preference number: 5 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTIDLHC*VGFYIG
Trigger: GCCAATGTAGAACCCAACCAAACAGTGGAGATCAAT...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATTGTTACAATAGAAGCTaGGCCTGCCTGGCTGAGAAG +
Preference number: 5 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHCYNRS*ACLAEK
Trigger: CTTCTCAGCCAGGCAGGCCAAGCTTCTATTGTAACA...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCATGGTTGGGTTCTACATaGGCAATACATGCTTTCACG +
Preference number: 5 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAWLGST*AIHAFT
Trigger: CGTGAAAGCATGTATTGCCAATGTAGAACCCAACCA...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAATTGATCTCCACTGTTaGGTTGGGTTCTACATTGGC +
Preference number: 5 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAIDLHC*VGFYIG
Trigger: GCCAATGTAGAACCCAACCAAACAGTGGAGATCAAT...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGATTGATCTCCACTGTTaGGTTGGGTTCTACATTGGC +
Preference number: 5 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARIDLHC*VGFYIG
Trigger: GCCAATGTAGAACCCAACCAAACAGTGGAGATCAAT...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CTGGCTGACCTGGCCGACTTCGCGCTGGCCATGAAGGATACGCTCACCAACATCAATGCTTCTTGCTCATaGATCTCCACTGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: LADLADFALAMKDTLTNINASCS*ISTVWL
Trigger: CAACCAAACAGTGGAGATCAATGAGCAAGAAGCATT...GATGTTGGTGAGCGTATCCTTCATGGCCAGCGCGAAGTCGGCCAGGTCAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGCTCTTCCAATGCTTCTaGCTCATTGATCTCCACTGT +
Preference number: 5 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARLFQCF*LIDLHC
Trigger: ACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAG...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TGGGAGGTTTGGGGAGTGTCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGTGGTCTGTAAATATTTaGCAGCTATCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: WEVWGVSRTAWDPWISARWSVNI*QLSLPG
Trigger: CCCTGGAAGAGATAGCTGCAAAATATTTACAGACCA...CCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGACACTCCCCAAACCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TGCTGCAGTGAGCGGCCCCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGAAGGAAGTGCTGGATGTaGGTCTGTAAATATTTTGCA +
Preference number: 5 (lower is better)
Translates to: CCSERPLTLSPRSPGTGRRKCWM*VCKYFA
Trigger: TGCAAAATATTTACAGACCAACATCCAGCACTTCCT...TCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGGGGCCGCTCACTGCAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGGCATGAACAAAGGCGGGGTTCTGGCTGGGGTCATCGGAGCCCGGAAACCACAGTGTTCCTGATCATCTaGAAAGGTTCTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: RHEQRRGSGWGHRSPETTVFLII*KGSSGT
Trigger: AGTTCCAGAAGAACCTTTCAAGATGATCAGGAACAC...TGTGGTTTCCGGGCTCCGATGACCCCAGCCAGAACCCCGCCTTTGTTCATGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACAGTGTCCCGTACTGCTaGGGACCCATGGATCAGTGC +
Preference number: 5 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNSVPYC*GPMDQC
Trigger: GCACTGATCCATGGGTCCCAAGCAGTACGGGACACT...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAGGAACTGGAGAGCAATaGTCAACAAGGGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: FNNFMLRIGEHPQLACPAGTGEQ*STRETE
Trigger: TTCAGTTTCCCTTGTTGACAATTGCTCTCCAGTTCC...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCGGAACTGGAGAGCAATaGTCAACAAGGGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESGTGEQ*STRETE
Trigger: TTCAGTTTCCCTTGTTGACAATTGCTCTCCAGTTCC...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS GCA 90 bp ACGGATGAGGCATATAACATCCCAGAGAGATACCTGAAGCCGGTCTaGCTGGTACTTCCTCCCAGAGTAAGCATTCAGGTACTCGCAGAG +
Preference number: 5 (lower is better)
Translates to: TDEAYNIPERYLKPV*LVLPPRVSIQVLAE
Trigger: CTCTGCGAGTACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGGTATCTCTCTGGGATGTTATATGCCTCATCCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS-3UTR CAA 90 bp TTCAATAACTTCATGCTGCGCATAGGTGAGCACCCCCAGCTGGCCTGCCCCGCAAATGCTTCTTGCTCATaGATCTCCACTGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: FNNFMLRIGEHPQLACPANASCS*ISTVWL
Trigger: CAACCAAACAGTGGAGATCAATGAGCAAGAAGCATT...TGCGGGGCAGGCCAGCTGGGGGTGCTCACCTATGCGCAGCATGAAGTTATTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CCTGACACTTTCTCCACGGTCCCCTGGCACAGGAAGACAAGTCCGAGAGAGAGCAATGCTTCTTGCTCATaGATCTCCACTGTTTGGTTG +
Preference number: 5 (lower is better)
Translates to: PDTFSTVPWHRKTSPRESNASCS*ISTVWL
Trigger: CAACCAAACAGTGGAGATCAATGAGCAAGAAGCATT...GCTCTCTCTCGGACTTGTCTTCCTGTGCCAGGGGACCGTGGAGAAAGTGTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp AGCAGGATGGAGTCCACGGGGGTCATGGGCAACATTCAGGTATGTCCAGTGGCACTCTTCCAATGCTTCTaGCTCATTGATCTCCACTGT +
Preference number: 5 (lower is better)
Translates to: SRMESTGVMGNIQVCPVALFQCF*LIDLHC
Trigger: ACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAG...TGCCACTGGACATACCTGAATGTTGCCCATGACCCCCGTGGACTCCATCCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATCTCTTCCAATGCTTCTaGCTCATTGATCTCCACTGT +
Preference number: 5 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHLFQCF*LIDLHC
Trigger: ACAGTGGAGATCAATGAGCAAGAAGCATTGGAAGAG...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCAGGACAACTGAGGCAATTCGGGTGGGGAGGTTCACGCACTCACAGGGCAAGGTGGTCTGTAAATATTTaGCAGCTATCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SGQLRQFGWGGSRTHRARWSVNI*QLSLPG
Trigger: CCCTGGAAGAGATAGCTGCAAAATATTTACAGACCA...CCTTGCCCTGTGAGTGCGTGAACCTCCCCACCCGAATTGCCTCAGTTGTCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCCCGTACTGCTTGGGACCCATGGATCAGTGCTCGGCTCCAACCACCCAAAGCCAGGAAGTGCTGGATGTaGGTCTGTAAATATTTTGCA +
Preference number: 5 (lower is better)
Translates to: SRTAWDPWISARLQPPKARKCWM*VCKYFA
Trigger: TGCAAAATATTTACAGACCAACATCCAGCACTTCCT...GGCTTTGGGTGGTTGGAGCCGAGCACTGATCCATGGGTCCCAAGCAGTACGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp GGCAACATTCAGGTATGTCCAGTGGCACAGCTGGCACGTGCTCAGACTCGGCATGGAACTGGAGAGCAATaGTCAACAAGGGAAACTGAA +
Preference number: 5 (lower is better)
Translates to: GNIQVCPVAQLARAQTRHGTGEQ*STRETE
Trigger: TTCAGTTTCCCTTGTTGACAATTGCTCTCCAGTTCC...ATGCCGAGTCTGAGCACGTGCCAGCTGTGCCACTGGACATACCTGAATGTTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CAGTTTCCAGGTAACAGTGCTGCCACCCAGGTGACCATGGCCATCCTAGGAGAGATCTCCACTGTTTGGTaGGGTTCTACATTGGCAATA +
Preference number: 5 (lower is better)
Translates to: QFPGNSAATQVTMAILGEISTVW*GSTLAI
Trigger: TATTGCCAATGTAGAACCCAACCAAACAGTGGAGAT...CTCTCCTAGGATGGCCATGGTCACCTGGGTGGCAGCACTGTTACCTGGAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS CCA 90 bp ATAACTAAGAGTCACTGGCAGCCTGGAAAGGCCTATAGGCCTAAATaGCCAGGGGTACAGCTTCGCAAGAGACTGTTTCTGCAGAAACTT +
Preference number: 5 (lower is better)
Translates to: ITKSHWQPGKAYRPK*PGVQLRKRLFLQKL
Trigger: AAGTTTCTGCAGAAACAGTCTCTTGCGAAGCTGTACCCCTGGCCATTTAGGCCTATAGGCCTTTCCAGGCTGCCAGTGACTCTTAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS-3UTR CAA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCGGCCTTCCCATGAAGTaGTCTAGGCAACCGGTGATA +
Preference number: 5 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTGLPMK*SRQPVI
Trigger: TATCACCGGTTGCCTAGACAACTTCATGGGAAGGCC...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260662.2
ENST00000380834.7
CDS-3UTR CAA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGACATGGCTCCCATTTaGAAGGGAGGTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: QEETLPPIHKIWAEVLDADMAPI*KGGLHV
Trigger: CACATGGAGACCTCCCTTCAAAATGGGAGCCATGTC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCCTGCTGACCTTCTTCTaGAAGGGGCGGGATAAGCTA +
Preference number: 5 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTLLTFF*KGRDKL
Trigger: TAGCTTATCCCGCCCCTTCAAGAAGAAGGTCAGCAG...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS GCA 90 bp ATAGGCCTAAATGGCCAGGGGTACAGCTTCGCAAGAGACTGTTTCTaGAGAAACTTCACTGACGTTACACGGCTAAGATGCTTCATGACT +
Preference number: 5 (lower is better)
Translates to: IGLNGQGYSFARDCF*RNFTDVTRLRCFMT
Trigger: AGTCATGAAGCATCTTAGCCGTGTAACGTCAGTGAAGTTTCTGCAGAAACAGTCTCTTGCGAAGCTGTACCCCTGGCCATTTAGGCCTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS-3UTR CAA 90 bp GCGCTGGCCATGAAGGATACGCTCACCAACATCAACAACCAGTCCTTCAATAACTGGTTGGGTTCTACATaGGCAATACATGCTTTCACG +
Preference number: 5 (lower is better)
Translates to: ALAMKDTLTNINNQSFNNWLGST*AIHAFT
Trigger: CGTGAAAGCATGTATTGCCAATGTAGAACCCAACCA...GTTATTGAAGGACTGGTTGTTGATGTTGGTGAGCGTATCCTTCATGGCCAGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGGGACTCCAATGTCCTaGCTTCTCCCTTCTAGCTCA +
Preference number: 5 (lower is better)
Translates to: SWTLGLETSSAFICSWMCGTPMS*LLPSSS
Trigger: TGAGCTAGAAGGGAGAAGCAAGGACATTGGAGTCCC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260662.2
CDS-3UTR CAA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGACATGGCTCCCATTTaGAAGGGAGGTCTCCATGTG +
Preference number: 5 (lower is better)
Translates to: SWTLGLETSSAFICSWMCDMAPI*KGGLHV
Trigger: CACATGGAGACCTCCCTTCAAAATGGGAGCCATGTC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS TCA 90 bp GGATGTTGGTCTGTAAATATTTTGCAGCTATCTCTTCCAGGGGAATaGAGACTGGGACTGAATGGTGATGTATCCGGAGTGGTTTCTGTA +
Preference number: 5 (lower is better)
Translates to: GCWSVNILQLSLPGE*RLGLNGDVSGVVSV
Trigger: TACAGAAACCACTCCGGATACATCACCATTCAGTCCCAGTCTTCATTCCCCTGGAAGAGATAGCTGCAAAATATTTACAGACCAACATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000491031.5
ENST00000498362.1
CDS TCA 90 bp AGCAAGGCACTCGGTATGGTACATAGTAGGCACGCCATAAATCCCTaGTGGATCAAAAGTATAGCAACTGCACTCTGTACAATCTTACGA +
Preference number: 5 (lower is better)
Translates to: SKALGMVHSRHAINP*WIKSIATALCTILR
Trigger: TCGTAAGATTGTACAGAGTGCAGTTGCTATACTTTTGATCCATCAGGGATTTATGGCGTGCCTACTATGTACCATACCGAGTGCCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS-3UTR CAA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCTGGTCTGTAAATATTTaGCAGCTATCTCTTCCAGGG +
Preference number: 5 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTWSVNI*QLSLPG
Trigger: CCCTGGAAGAGATAGCTGCAAAATATTTACAGACCA...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGTGTTCCTGATCATCTaGAAAGGTTCTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAVFLII*KGSSGT
Trigger: AGTTCCAGAAGAACCTTTCAAGATGATCAGGAACAC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp CAGGAAGAAACACTTCCACCCATCCACAAAATCTGGGCTGAAGTTCTAGATGCAGCATATGGCCTACCTTaGGGTATGAACCTTCTAATA +
Preference number: 5 (lower is better)
Translates to: QEETLPPIHKIWAEVLDAAYGLP*GMNLLI
Trigger: TATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC...TGCATCTAGAACTTCAGCCCAGATTTTGTGGATGGGTGGAAGTGTTTCTTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCCAGTGCTTATCACCTAGTTGAGGGATCCAAACAAGGACAACCTGACAAAACCAGGAAGTGCTGGATGTaGGTCTGTAAATATTTTGCA +
Preference number: 5 (lower is better)
Translates to: SSAYHLVEGSKQGQPDKTRKCWM*VCKYFA
Trigger: TGCAAAATATTTACAGACCAACATCCAGCACTTCCT...GGTTTTGTCAGGTTGTCCTTGTTTGGATCCCTCAACTAGGTGATAAGCACTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTATCTCCACTGTTTGGTaGGGTTCTACATTGGCAATA +
Preference number: 5 (lower is better)
Translates to: SWTLGLETSSAFICSWMCISTVW*GSTLAI
Trigger: TATTGCCAATGTAGAACCCAACCAAACAGTGGAGAT...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGTGTTCCTGATCATCTaGAAAGGTTCTTCTGGAACT +
Preference number: 5 (lower is better)
Translates to: SWTLGLETSSAFICSWMCVFLII*KGSSGT
Trigger: AGTTCCAGAAGAACCTTTCAAGATGATCAGGAACAC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS-3UTR CAA 90 bp TCATGGACTTTAGGTTTAGAAACCTCCTCAGCCTTCATTTGTTCGTGGATGTGTGCATATGGCCTACCTTaGGGTATGAACCTTCTAATA +
Preference number: 5 (lower is better)
Translates to: SWTLGLETSSAFICSWMCAYGLP*GMNLLI
Trigger: TATTAGAAGGTTCATACCCAAAGGTAGGCCATATGC...ACACATCCACGAACAAATGAAGGCTGAGGAGGTTTCTAAACCTAAAGTCCATGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
CDS CAA 72 bp GTTCTCCTGGCCGGCGGGCGCACTGGTAGCGCAGGCTaGTCACGCGGCCACCGCGGCCTTGCACACTCACCG +
Preference number: 6 (lower is better)
Translates to: VLLAGGRTGSAG*SRGHRGLAHSP
Trigger: CGGTGAGTGTGCAAGGCCGCGGTGGCCGCGTGACAAGCCTGCGCTACCAGTGCGCCCGCCGGCCAGGAGAAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS CAA 90 bp ACAAGCTCCGTTCTCCTGGCCGGCGGGCGCACTGGTAGCGCAGGCTaGTCACGCGGCCACCGCGGCCTTGCACACTCACCGCGACCACCC +
Preference number: 6 (lower is better)
Translates to: TSSVLLAGGRTGSAG*SRGHRGLAHSPRPP
Trigger: GGGTGGTCGCGGTGAGTGTGCAAGGCCGCGGTGGCCGCGTGACAAGCCTGCGCTACCAGTGCGCCCGCCGGCCAGGAGAACGGAGCTTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS CAA 90 bp GCGGGCGCACTGGTAGCGCAGGCTTGTCACGCGGCCACCGCGGCCTaGCACACTCACCGCGACCACCCGCACACAGCCGCTTACCTCCAA +
Preference number: 6 (lower is better)
Translates to: AGALVAQACHAATAA*HTHRDHPHTAAYLQ
Trigger: TTGGAGGTAAGCGGCTGTGTGCGGGTGGTCGCGGTGAGTGTGCAAGGCCGCGGTGGCCGCGTGACAAGCCTGCGCTACCAGTGCGCCCGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS GCA 72 bp AACCAAACCAACCGGTCCCGGCGTGCTTTGCGATCCTaGCGTACAAAAGCATGGCGGCGCTCAGGGCCCCGC +
Preference number: 6 (lower is better)
Translates to: NQTNRSRRALRS*RTKAWRRSGPR
Trigger: GCGGGGCCCTGAGCGCCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473476.5
ENST00000473706.5
CDS CCA 72 bp TCCCGGCGTGCTTTGCGATCCTGCCGTACAAAAGCATaGCGGCGCTCAGGGCCCCGCCCTGATCCCAAGATG +
Preference number: 6 (lower is better)
Translates to: SRRALRSCRTKA*RRSGPRPDPKM
Trigger: CATCTTGGGATCAGGGCGGGGCCCTGAGCGCCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACGCCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473476.5
ENST00000473706.5
CDS GCA 72 bp ACATTGGCAATACATGCTTTCACGCTGGCTCGCCGGTaGCGCACCACAGCCCTCAGCTCATCTCGCAGACGC +
Preference number: 6 (lower is better)
Translates to: TLAIHAFTLARR*RTTALSSSRRR
Trigger: GCGTCTGCGAGATGAGCTGAGGGCTGTGGTGCGGCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1
CDS CCA 72 bp GTGTTACGAAAGGATCTATCACAAGCTCCGTTCTCCTaGCCGGCGGGCGCACTGGTAGCGCAGGCTTGTCAC +
Preference number: 6 (lower is better)
Translates to: VLRKDLSQAPFS*PAGALVAQACH
Trigger: GTGACAAGCCTGCGCTACCAGTGCGCCCGCCGGCCAGGAGAACGGAGCTTGTGATAGATCCTTTCGTAACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS GCA 72 bp GTCTTCAAAACCAAACCAACCGGTCCCGGCGTGCTTTaGGATCCTGCCGTACAAAAGCATGGCGGCGCTCAG +
Preference number: 6 (lower is better)
Translates to: VFKTKPTGPGVL*DPAVQKHGGAQ
Trigger: CTGAGCGCCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473476.5
ENST00000473706.5
CDS GCA 72 bp TCCACGTCTTCAAAACCAAACCAACCGGTCCCGGCGTaGTTTGCGATCCTGCCGTACAAAAGCATGGCGGCG +
Preference number: 6 (lower is better)
Translates to: STSSKPNQPVPA*FAILPYKSMAA
Trigger: CGCCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGACGTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000473476.5
ENST00000473706.5
ENST00000491031.5
CDS CAA 72 bp CGTCTTCAAAACCAAACCAACCGGTCCCGGCGTGCTTaGCGATCCTGCCGTACAAAAGCATGGCGGCGCTCA +
Preference number: 6 (lower is better)
Translates to: RLQNQTNRSRRA*RSCRTKAWRRS
Trigger: TGAGCGCCGCCATGCTTTTGTACGGCAGGATCGCAAAGCACGCCGGGACCGGTTGGTTTGGTTTTGAAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000473476.5
ENST00000473706.5
CDS CAA 72 bp GCCTCTGGGGCGGAGCCGCAGGTCCTGGTACAATACTaGGTGTTACGAAAGGATCTATCACAAGCTCCGTTC +
Preference number: 6 (lower is better)
Translates to: ASGAEPQVLVQY*VLRKDLSQAPF
Trigger: GAACGGAGCTTGTGATAGATCCTTTCGTAACACCAAGTATTGTACCAGGACCTGCGGCTCCGCCCCAGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS TCA 72 bp ACAGCCCTCAGCTCATCTCGCAGACGCCTTAGTTTATaGATCTTGGTTCCAAGAGCACCTTCCTGGGCCTGC +
Preference number: 6 (lower is better)
Translates to: TALSSSRRRLSL*ILVPRAPSWAC
Trigger: GCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCTGCGAGATGAGCTGAGGGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1
CDS CCA 72 bp CCTCTGGGGCGGAGCCGCAGGTCCTGGTACAATACTTaGTGTTACGAAAGGATCTATCACAAGCTCCGTTCT +
Preference number: 6 (lower is better)
Translates to: PLGRSRRSWYNT*CYERIYHKLRS
Trigger: AGAACGGAGCTTGTGATAGATCCTTTCGTAACACCAAGTATTGTACCAGGACCTGCGGCTCCGCCCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473706.5
CDS CCA 72 bp AGTCACTGGCAGCCTGGAAAGGCCTATAGGCCTAAATaGCCAGGGGTACAGCTTCGCAAGAGACTGTTTCTG +
Preference number: 6 (lower is better)
Translates to: SHWQPGKAYRPK*PGVQLRKRLFL
Trigger: CAGAAACAGTCTCTTGCGAAGCTGTACCCCTGGCCATTTAGGCCTATAGGCCTTTCCAGGCTGCCAGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS GCA 72 bp GCACGCTCTGCAGCTCTTCAGACTGTTTACGGGATCTaGTCACTTGGGTCTCTAGCCTTTCCAAGTGAGCTA +
Preference number: 6 (lower is better)
Translates to: ARSAALQTVYGI*SLGSLAFPSEL
Trigger: TAGCTCACTTGGAAAGGCTAGAGACCCAAGTGAGCAGATCCCGTAAACAGTCTGAAGAGCTGCAGAGCGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473476.5
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1
CDS CCA 72 bp TCAGCTCATCTCGCAGACGCCTTAGTTTATGAATCTTaGTTCCAAGAGCACCTTCCTGGGCCTGCACGCTCT +
Preference number: 6 (lower is better)
Translates to: SAHLADALVYES*FQEHLPGPARS
Trigger: AGAGCGTGCAGGCCCAGGAAGGTGCTCTTGGAACCAAGATTCATAAACTAAGGCGTCTGCGAGATGAGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1
CDS CAA 72 bp TGCTCATTGATCTCCACTGTTTGGTTGGGTTCTACATaGGCAATACATGCTTTCACGCTGGCTCGCCGGTGC +
Preference number: 6 (lower is better)
Translates to: CSLISTVWLGST*AIHAFTLARRC
Trigger: GCACCGGCGAGCCAGCGTGAAAGCATGTATTGCCAATGTAGAACCCAACCAAACAGTGGAGATCAATGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1
CDS GCA 72 bp GCATATAACATCCCAGAGAGATACCTGAAGCCGGTCTaGCTGGTACTTCCTCCCAGAGTAAGCATTCAGGTA +
Preference number: 6 (lower is better)
Translates to: AYNIPERYLKPV*LVLPPRVSIQV
Trigger: TACCTGAATGCTTACTCTGGGAGGAAGTACCAGGCAGACCGGCTTCAGGTATCTCTCTGGGATGTTATATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS GCA 72 bp AATGGCCAGGGGTACAGCTTCGCAAGAGACTGTTTCTaGAGAAACTTCACTGACGTTACACGGCTAAGATGC +
Preference number: 6 (lower is better)
Translates to: NGQGYSFARDCF*RNFTDVTRLRC
Trigger: GCATCTTAGCCGTGTAACGTCAGTGAAGTTTCTGCAGAAACAGTCTCTTGCGAAGCTGTACCCCTGGCCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS CCA 72 bp GCAACCCAAAAAGGTAGGCTAGAGTTTAGGGGAAGATaGACAGCATTGTTCCATGGCACTGCAGAAACCTTT +
Preference number: 6 (lower is better)
Translates to: ATQKGRLEFRGR*TALFHGTAETF
Trigger: AAAGGTTTCTGCAGTGCCATGGAACAATGCTGTCCATCTTCCCCTAAACTCTAGCCTACCTTTTTGGGTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS TCA 72 bp TCTGTAAATATTTTGCAGCTATCTCTTCCAGGGGAATaGAGACTGGGACTGAATGGTGATGTATCCGGAGTG +
Preference number: 6 (lower is better)
Translates to: SVNILQLSLPGE*RLGLNGDVSGV
Trigger: CACTCCGGATACATCACCATTCAGTCCCAGTCTTCATTCCCCTGGAAGAGATAGCTGCAAAATATTTACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000491031.5
ENST00000498362.1
CDS TCA 72 bp CTCGGTATGGTACATAGTAGGCACGCCATAAATCCCTaGTGGATCAAAAGTATAGCAACTGCACTCTGTACA +
Preference number: 6 (lower is better)
Translates to: LGMVHSRHAINP*WIKSIATALCT
Trigger: TGTACAGAGTGCAGTTGCTATACTTTTGATCCATCAGGGATTTATGGCGTGCCTACTATGTACCATACCGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000491031.5
CDS CAA 72 bp TCCAATGCTTCTTGCTCATTGATCTCCACTGTTTGGTaGGGTTCTACATTGGCAATACATGCTTTCACGCTG +
Preference number: 6 (lower is better)
Translates to: SNASCSLISTVW*GSTLAIHAFTL
Trigger: CAGCGTGAAAGCATGTATTGCCAATGTAGAACCCAACCAAACAGTGGAGATCAATGAGCAAGAAGCATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260662.2
ENST00000380834.7
ENST00000473706.5
ENST00000486527.6
ENST00000491031.5
ENST00000498362.1