Pregenerated sensors for CENPN (Homo sapiens)
Ensembl gene IDs: ENSG00000166451Ensembl transcript IDs: ENST00000299572.9, ENST00000305850.10, ENST00000393335.7, ENST00000439957.7, ENST00000564669.5
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGTTTCCCTGCACAAGCTCTCTTGCCTGCCGCCATGTAAGACATaGCTTTGCTTCTCATTTGCCTTCCACCATGATTGTGAGGCCTCC | + |
|
Preference number: 1 (lower is better) Translates to: GVSLHKLSCLPPCKT*LCFSFAFHHDCEAS Trigger: GGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCTTACATGGCGGCAGGCAAGAGAGCTTGTGCAGGGAAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR GCA 90 bp | TGGTGGTTTTATAAATGGGAGTTTCCCTGCACAAGCTCTCTTGCCTaGCGCCATGTAAGACATGACTTTGCTTCTCATTTGCCTTCCACC | + |
|
Preference number: 1 (lower is better) Translates to: WWFYKWEFPCTSSLA*RHVRHDFASHLPST Trigger: GGTGGAAGGCAAATGAGAAGCAAAGTCATGTCTTACATGGCGGCAGGCAAGAGAGCTTGTGCAGGGAAACTCCCATTTATAAAACCACCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 90 bp | TTCCCCCATACTATTCTCATGGTAGTGAATAAGTTTCATGAGCTCTaGTGGTTTTATAAATGGGAGTTTCCCTGCACAAGCTCTCTTGCC | + |
|
Preference number: 1 (lower is better) Translates to: FPHTILMVVNKFHEL*WFYKWEFPCTSSLA Trigger: GGCAAGAGAGCTTGTGCAGGGAAACTCCCATTTATAAAACCACCAGAGCTCATGAAACTTATTCACTACCATGAGAATAGTATGGGGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 90 bp | GCAGCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTaGGAGACAGATTCAGCTAGAAGCCACTTGTGTTCTGAAGAGAGA | + |
|
Preference number: 1 (lower is better) Translates to: AARQGVFIEVLGIAI*ETDSARSHLCSEER Trigger: TCTCTCTTCAGAACACAAGTGGCTTCTAGCTGAATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGCTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CAA 90 bp | AGCTCTCTTGCCTGCCGCCATGTAAGACATGACTTTGCTTCTCATTaGCCTTCCACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAAT | + |
|
Preference number: 2 (lower is better) Translates to: SSLACRHVRHDFASH*PSTMIVRPPWPRGN Trigger: ATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCTTACATGGCGGCAGGCAAGAGAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CAA 90 bp | CATGCCTGTGATATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTaGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCAGGTGGA | + |
|
Preference number: 2 (lower is better) Translates to: HACDMVWLCLHTSVT*NCNNPHVTRAGPGG Trigger: TCCACCTGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCATATCACAGGCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAATGTGCGTCAGTTAAGCCTCAGACCTCTCCAGAATTaGGAAGAGACAGCCATAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TMIVRPPWPRGNVRQLSLRPLQN*EETAIE Trigger: TTCTATGGCTGTCTCTTCTCAATTCTGGAGAGGTCT...GAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR GCA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCACCAAGATTGTGCCATTaGACTCCAGCCTGGGCGATA | + |
|
Preference number: 2 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPPRLCH*TPAWAI Trigger: TATCGCCCAGGCTGGAGTGCAATGGCACAATCTTGG...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCACCGCCATGTAAGACATaGCTTTGCTTCTCATTTGCC | + |
|
Preference number: 2 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPPPCKT*LCFSFA Trigger: GGCAAATGAGAAGCAAAGTCATGTCTTACATGGCGG...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGCTGGTCTCGAACTCCTaGCCTCGGGTGATCTGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRLVSNS*PRVICP Trigger: TGGGCAGATCACCCGAGGTCAGGAGTTCGAGACCAG...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CCA 90 bp | ATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATTGTAATAACCCCCATATTGTGAGGCCTCCCTaGCCACGTGGAAATGTGCGT | + |
|
Preference number: 2 (lower is better) Translates to: MVWLCLHTSVTLNCNNPHIVRPP*PRGNVR Trigger: ACGCACATTTCCACGTGGCCAGGGAGGCCTCACAAT...ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | ATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATTGTAATAACCCCCATCAGCTACTCAGAGGCTaGGGCAGGAGAATCTCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: MVWLCLHTSVTLNCNNPHQLLRG*GRRISS Trigger: TGAAGAGATTCTCCTGCCTCAGCCTCTGAGTAGCTG...ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR GCA 90 bp | GCTCATGCCTGTGATATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATAAGAAGGAGGAGCTGTaGTTAAGAAACCACGCACGT | + |
|
Preference number: 2 (lower is better) Translates to: AHACDMVWLCLHTSVTLNKKEEL*LRNHAR Trigger: ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTT...ATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCATATCACAGGCATGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CCA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCATTTAGGAGGCTAAAATaGGCAGATTGCTTGAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPFRRLK*ADCLSP Trigger: TGGGCTCAAGCAATCTGCCCATTTTAGCCTCCTAAA...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGTTGAGCCCAGGAGTTTaGGATCAGCCTGGGCAACAT | + |
|
Preference number: 2 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRLSPGV*DQPGQH Trigger: ATGTTGCCCAGGCTGATCTCAAACTCCTGGGCTCAA...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | AAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTCCGAGGCAGCATAGCTaGTTAATCATTGGTTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: KLQIVQAVLLRMASQLHFPRQHS*LIIGWL Trigger: CAACCAACCAATGATTAATCAGCTATGCTGCCTCGG...AAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| 3UTR-3UTR GCA 90 bp | AGACATGACTTTGCTTCTCATTTGCCTTCCACCATGATTGTGAGGCCTCCCTGGAGCCATGAACTGAAGTaGATGTGCAATATCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: RHDFASHLPSTMIVRPPWSHELK*MCNIKK Trigger: CTTCTTGATATTGCACATGCACTTCAGTTCATGGCT...CCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR GCA 90 bp | CAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTTGGTTGTCAAGTCAGTaGACATCCAAGCTTCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: QIVQAVLLRMASQLHFRAWLSSQ*TSKLPR Trigger: TCTTGGAAGCTTGGATGTGCACTGACTTGACAACCA...AGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| 3UTR-3UTR TCA 90 bp | GCTCATGCCTGTGATATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATCATATCGTGGAGGAATaGATCAGTCCCAACAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: AHACDMVWLCLHTSVTLNHIVEE*ISPNNY Trigger: ATAATTGTTGGGACTGATTCATTCCTCCACGATATG...ATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCATATCACAGGCATGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGTGCTGGTGAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCGCTGTGCCATATGCTTaGTTTCAGAGCATTCAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: CSAGEIKFSRMQWSSQFGAVPYA*FQSIQA Trigger: TGCCTGAATGCTCTGAAATCAAGCATATGGCACAGC...GCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTCACCAGCACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGTGCTGGTGAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCAAACCCAAAAGTCTTaGGCGCTGTGCCATATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: CSAGEIKFSRMQWSSQFGQTQKS*ALCHML Trigger: AAGCATATGGCACAGCGCTCAAGACTTTTGGGTTTG...GCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTCACCAGCACTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTGGGAGACAGATCATTGCACTCCAGCCTaGGCGATAGAAGGAGACTTG | + |
|
Preference number: 2 (lower is better) Translates to: ARQGVFIEVLGIAIWETDHCTPA*AIEGDL Trigger: CAAGTCTCCTTCTATCGCCCAGGCTGGAGTGCAATG...ATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGCTAGGAGAAACCTCCTaGAGTGCTGGGATTACAAGT | + |
|
Preference number: 2 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRLGETS*SAGITS Trigger: ACTTGTAATCCCAGCACTTCAGGAGGTTTCTCCTAG...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | TGTAGTGCTGGTGAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCTGGTATCAGAAGTGTaGGAGTACACTAGGAGAAAC | + |
|
Preference number: 2 (lower is better) Translates to: CSAGEIKFSRMQWSSQFGLVSEV*EYTRRN Trigger: GTTTCTCCTAGTGTACTCTCACACTTCTGATACCAG...GCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTCACCAGCACTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR GCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGAAGAAGGAGGAGCTGTaGTTAAGAAACCACGCACGT | + |
|
Preference number: 2 (lower is better) Translates to: HIYICPVISNATTATVSRKKEEL*LRNHAR Trigger: ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTT...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| 3UTR-3UTR TCA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACCATATCGTGGAGGAATaGATCAGTCCCAACAATTAT | + |
|
Preference number: 2 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYHIVEE*ISPNNY Trigger: ATAATTGTTGGGACTGATTCATTCCTCCACGATATG...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| 3UTR-3UTR GCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGAGCCATGAACTGAAGTaGATGTGCAATATCAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRSHELK*MCNIKK Trigger: CTTCTTGATATTGCACATGCACTTCAGTTCATGGCT...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| 3UTR-3UTR CCA 90 bp | GCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTGGGAGACAGATCTCATGCCTGTGATATaGTTTGGCTGTGTCTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: ARQGVFIEVLGIAIWETDLMPVI*FGCVST Trigger: TGTGGAGACACAGCCAAACCATATCACAGGCATGAG...ATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | TTAGTACAAAAATCCATAGTTTATTGGTTGGTGCTGTTGAGGAGTTGTAGTGCTACACCCGGCCCAGAGTaGAGTCATTTTTCTATATCA | + |
|
Preference number: 2 (lower is better) Translates to: LVQKSIVYWLVLLRSCSATPGPE*SHFSIS Trigger: TGATATAGAAAAATGACTTCACTCTGGGCCGGGTGT...AGCACTACAACTCCTCAACAGCACCAACCAATAAACTATGGATTTTTGTACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR TCA 90 bp | TTTTTGTGTTTTGCAAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTTCCATTTTAGAGCTCTaGACCAAAGTGATGCCATTT | + |
|
Preference number: 2 (lower is better) Translates to: FLCFASCRLCRQSFLEWLSILEL*TKVMPF Trigger: AAATGGCATCACTTTGGTTCAGAGCTCTAAAATGGA...AAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTTGCAAAACACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| 3UTR-3UTR CCA 90 bp | CAAGTTGTTTTGAAAGAGGCAACTGGCTTAGTACAAAAATCCATAGTTTATTGGGCAACAATAACAGAATaGACTCAACTCCATCCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: QVVLKEATGLVQKSIVYWATITE*TQLHPL Trigger: CAAAGGATGGAGTTGAGTCCATTCTGTTATTGTTGC...CCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTCTTTCAAAACAACTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CCA 90 bp | TTAGTACAAAAATCCATAGTTTATTGGTTGGTGCTGTTGAGGAGTTGTAGTGCTTTTCATGAGCTCTGGTaGTTTTATAAATGGGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: LVQKSIVYWLVLLRSCSAFHELW*FYKWEF Trigger: AAACTCCCATTTATAAAACCACCAGAGCTCATGAAA...AGCACTACAACTCCTCAACAGCACCAACCAATAAACTATGGATTTTTGTACTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR TCA 72 bp | CCCCATGTGACAAGGGCAGGGCCAGGTGGAGATACTTaGGTCATGGGAACGATTTCCCCCATACTATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PHVTRAGPGGDT*VMGTISPILFS Trigger: TGAGAATAGTATGGGGGAAATCGTTCCCATGACTCAAGTATCTCCACCTGGCCCTGCCCTTGTCACATGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR TCA 72 bp | GAAACCCCCTCCCCCACATATCTGGTATCAGAAGTGTaGGAGTACACTAGGAGAAACCTCCTGAAGTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: ETPSPTYLVSEV*EYTRRNLLKCW Trigger: CCAGCACTTCAGGAGGTTTCTCCTAGTGTACTCTCACACTTCTGATACCAGATATGTGGGGGAGGGGGTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 72 bp | TCTCATTTGCCTTCCACCATGATTGTGAGGCCTCCCTaGCCACGTGGAAATGTGCGTCAGTTAAGCCTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SHLPSTMIVRPP*PRGNVRQLSLF Trigger: AAAGAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR TCA 72 bp | CTGCACAAGCTCTCTTGCCTGCCGCCATGTAAGACATaGCTTTGCTTCTCATTTGCCTTCCACCATGATTGT | + |
|
Preference number: 3 (lower is better) Translates to: LHKLSCLPPCKT*LCFSFAFHHDC Trigger: ACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCTTACATGGCGGCAGGCAAGAGAGCTTGTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR GCA 72 bp | CATGAGCTCTGGTGGTTTTATAAATGGGAGTTTCCCTaGACAAGCTCTCTTGCCTGCCGCCATGTAAGACAT | + |
|
Preference number: 3 (lower is better) Translates to: HELWWFYKWEFP*TSSLACRHVRH Trigger: ATGTCTTACATGGCGGCAGGCAAGAGAGCTTGTGCAGGGAAACTCCCATTTATAAAACCACCAGAGCTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CAA 90 bp | CATGAGCTCTGGTGGTTTTATAAATGGGAGTTTCCCTGCACAAGCTCTCTTGCCACAAACCCAAAAGTCTaGAGCGCTGTGCCATATGCT | + |
|
Preference number: 3 (lower is better) Translates to: HELWWFYKWEFPCTSSLATNPKV*SAVPYA Trigger: AGCATATGGCACAGCGCTCAAGACTTTTGGGTTTGT...GGCAAGAGAGCTTGTGCAGGGAAACTCCCATTTATAAAACCACCAGAGCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATTGTAATAACCCCCATGCCAGGTGGAGATACTaGAGTCATGGGAACGATTTC | + |
|
Preference number: 3 (lower is better) Translates to: MVWLCLHTSVTLNCNNPHARWRY*SHGNDF Trigger: GAAATCGTTCCCATGACTCAAGTATCTCCACCTGGC...ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCTGAACCAATCCCACAAAAAGTGGTaGTCAAGTCAGTGCACATCC | + |
|
Preference number: 3 (lower is better) Translates to: QAVLLRMASQLHFRALNQSHKKW*SSQCTS Trigger: GGATGTGCACTGACTTGACAACCACTTTTTGTGGGA...TTGGTTCAGAGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| 3UTR-3UTR CAA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGCAAGGTTTTGCCATGTaGGCTAGGCTGGTCTCGAAC | + |
|
Preference number: 3 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRQGFAM*ARLVSN Trigger: GTTCGAGACCAGCCTAGCCAACATGGCAAAACCTTG...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCTGAACCAATCACATTTTCCTTTTTaGATCAAGATCCGAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: QAVLLRMASQLHFRALNQSHFPF*IKIRGS Trigger: GCTGCCTCGGATCTTGATCAAAAAAGGAAAATGTGA...TTGGTTCAGAGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCTGAACCAACTGATTAATCATTGGTaGGTTGGCCACAGATTAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QAVLLRMASQLHFRALNQLINHW*VGHRLV Trigger: AACTAATCTGTGGCCAACCAACCAATGATTAATCAG...TTGGTTCAGAGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| 3UTR CCA 72 bp | GAGGCAACTGGCTTAGTACAAAAATCCATAGTTTATTaGTTGGTGCTGTTGAGGAGTTGTAGTGCTGGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EATGLVQKSIVY*LVLLRSCSAGE Trigger: TTCACCAGCACTACAACTCCTCAACAGCACCAACCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 72 bp | TGTAGTGCTGGTGAAATAAAATTTTCCAGGATGCAGTaGTCATCGCAATTTGGCCCAATTCAAAGGTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CSAGEIKFSRMQ*SSQFGPIQRFK Trigger: CTTGAACCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTCACCAGCACTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTGGGAGACAGATGACTTTGCTTCTCATTaGCCTTCCACCATGATTGTG | + |
|
Preference number: 3 (lower is better) Translates to: ARQGVFIEVLGIAIWETDDFASH*PSTMIV Trigger: CACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTC...ATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 72 bp | ACTATTCTCATGGTAGTGAATAAGTTTCATGAGCTCTaGTGGTTTTATAAATGGGAGTTTCCCTGCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TILMVVNKFHEL*WFYKWEFPCTS Trigger: GCTTGTGCAGGGAAACTCCCATTTATAAAACCACCAGAGCTCATGAAACTTATTCACTACCATGAGAATAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 72 bp | AATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTaGCCCAATTCAAAGGTTCAAGGTAAGCTCCTGTAT | + |
|
Preference number: 3 (lower is better) Translates to: NKIFQDAVVIAI*PNSKVQGKLLY Trigger: ATACAGGAGCTTACCTTGAACCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR-3UTR CAA 90 bp | CAAGTTGTTTTGAAAGAGGCAACTGGCTTAGTACAAAAATCCATAGTTTATTGGCACACAAGTGTCACCTaGAATTGTAATAACCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: QVVLKEATGLVQKSIVYWHTSVT*NCNNPH Trigger: ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG...CCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTCTTTCAAAACAACTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CCA 72 bp | TTAGACAAGTTGACAAGTTGTTTTGAAAGAGGCAACTaGCTTAGTACAAAAATCCATAGTTTATTGGTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LDKLTSCFERGN*LSTKIHSLLVG Trigger: ACCAACCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTCTTTCAAAACAACTTGTCAACTTGTCTAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | ACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAATGTGCGTCAGTTAAGCCTCCTGGTCTCGAACTCCTaGCCTCGGGTGATCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TMIVRPPWPRGNVRQLSLLVSNS*PRVICP Trigger: TGGGCAGATCACCCGAGGTCAGGAGTTCGAGACCAG...GAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CAA 72 bp | CCCCCATGTGACAAGGGCAGGGCCAGGTGGAGATACTaGAGTCATGGGAACGATTTCCCCCATACTATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PPCDKGRARWRY*SHGNDFPHTIL Trigger: GAGAATAGTATGGGGGAAATCGTTCCCATGACTCAAGTATCTCCACCTGGCCCTGCCCTTGTCACATGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | ACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAATGTGCGTCAGTTAAGCCTCGGTAGCTCATGCCTGTaGTATGGTTTGGCTGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TMIVRPPWPRGNVRQLSLGSSCL*YGLAVS Trigger: AGACACAGCCAAACCATATCACAGGCATGAGCTACC...GAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | ACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAATGTGCGTCAGTTAAGCCTCAAGCCACTTGTGTTCTaGAGAGAGAGGGTAGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: TMIVRPPWPRGNVRQLSLKPLVF*RERVEE Trigger: CTCCTCTACCCTCTCTCTTCAGAACACAAGTGGCTT...GAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | GCTCATGCCTGTGATATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATGCAGTCTCGGCTCACTaGAACCTATGTCTCCCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AHACDMVWLCLHTSVTLNAVSAH*NLCLPG Trigger: ACCCGGGAGACATAGGTTGCAGTGAGCCGAGACTGC...ATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCATATCACAGGCATGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTGTAATAACCCCCATGTaGCAAGGGCAGGGCCAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARVITPM*QGQGQV Trigger: CACCTGGCCCTGCCCTTGTCACATGGGGGTTATTAC...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | AGACATGACTTTGCTTCTCATTTGCCTTCCACCATGATTGTGAGGCCTCCCTGGCCAAGATTGTGCCATTaGACTCCAGCCTGGGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: RHDFASHLPSTMIVRPPWPRLCH*TPAWAI Trigger: TATCGCCCAGGCTGGAGTGCAATGGCACAATCTTGG...CCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | CATGAGCTCTGGTGGTTTTATAAATGGGAGTTTCCCTGCACAAGCTCTCTTGCCCAGCTACTCAGAGGCTaGGGCAGGAGAATCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: HELWWFYKWEFPCTSSLAQLLRG*GRRISS Trigger: TGAAGAGATTCTCCTGCCTCAGCCTCTGAGTAGCTG...GGCAAGAGAGCTTGTGCAGGGAAACTCCCATTTATAAAACCACCAGAGCTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTACGGCCCACATCTCCTaGAGTCTCACTCCTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARTAHIS*SLTPQE Trigger: CTCTTGAGGAGTGAGACTGCAGGAGATGTGGGCCGT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTAAGGGCAGGGCCAGGTaGAGATACTTGAGTCATGGG | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARKGRAR*RYLSHG Trigger: CCCATGACTCAAGTATCTCCACCTGGCCCTGCCCTT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | GCTCATGCCTGTGATATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATACAGGGCAGCATCACTaGTACTTGCACGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AHACDMVWLCLHTSVTLNTGQHH*YLHAFP Trigger: AGGAAAAGCGTGCAAGTATCAGTGATGCTGCCCTGT...ATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCATATCACAGGCATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCAGCTGTGCCATATGCTTaGTTTCAGAGCATTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPAVPYA*FQSIQA Trigger: TGCCTGAATGCTCTGAAATCAAGCATATGGCACAGC...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCATATGCAAGTGAGCAGTaGAGAAAGTGGAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPYASEQ*RKWSIC Trigger: GCAGATGCTCCACTTTCTCCACTGCTCACTTGCATA...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| 3UTR CAA 72 bp | GATATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTaGAATTGTAATAACCCCCATGTGACAAGGGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: DMVWLCLHTSVT*NCNNPHVTRAG Trigger: CCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | CAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTACAGGGCAGCATCACTaGTACTTGCACGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIVQAVLLRMASQLHFRATGQHH*YLHAFP Trigger: AGGAAAAGCGTGCAAGTATCAGTGATGCTGCCCTGT...AGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTACAGGGCAGCATCACTaGTACTTGCACGCTTTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARTGQHH*YLHAFP Trigger: AGGAAAAGCGTGCAAGTATCAGTGATGCTGCCCTGT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | ACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAATGTGCGTCAGTTAAGCCTCCTCAACTCCATCCTTTaGATAGACCAATTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: TMIVRPPWPRGNVRQLSLLNSIL*IDQFHD Trigger: ATCATGAAATTGGTCTATTCAAAGGATGGAGTTGAG...GAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGTCACCTAGGCTGGAGTaGAGTGGTGCAGTCTCGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRSPRLE*SGAVSA Trigger: AGCCGAGACTGCACCACTGCACTCCAGCCTAGGTGA...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTGCTGTGCCATATGCTTaGTTTCAGAGCATTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARAVPYA*FQSIQA Trigger: TGCCTGAATGCTCTGAAATCAAGCATATGGCACAGC...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTCTAGGAGAAACCTCCTaGAGTGCTGGGATTACAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARLGETS*SAGITS Trigger: ACTTGTAATCCCAGCACTTCAGGAGGTTTCTCCTAG...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | ATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATTGTAATAACCCCCATATTGGTTGGTGCTGTTaGGGAGTTGTAGTGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: MVWLCLHTSVTLNCNNPHIGWCC*GVVVLV Trigger: CACCAGCACTACAACTCCTCAACAGCACCAACCAAT...ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGTTTTGCAAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTACGGCCCACATCTCCTaGAGTCTCACTCCTCAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLCFASCRLCRQSFLEWLTAHIS*SLTPQE Trigger: CTCTTGAGGAGTGAGACTGCAGGAGATGTGGGCCGT...AAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTTGCAAAACACAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR GCA 90 bp | CATGAGCTCTGGTGGTTTTATAAATGGGAGTTTCCCTGCACAAGCTCTCTTGCCAGCATCACTGATACTTaGACGCTTTTCCTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: HELWWFYKWEFPCTSSLASITDT*TLFLTQ Trigger: CTGTGTGAGGAAAAGCGTGCAAGTATCAGTGATGCT...GGCAAGAGAGCTTGTGCAGGGAAACTCCCATTTATAAAACCACCAGAGCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTAAGAAGGAGGAGCTGTaGTTAAGAAACCACGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARKKEEL*LRNHAR Trigger: ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTTATGCAAGTGAGCAGTaGAGAAAGTGGAGCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARYASEQ*RKWSIC Trigger: GCAGATGCTCCACTTTCTCCACTGCTCACTTGCATA...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGATTGTGAGGCCTCCCTaGCCACGTGGAAATGTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRIVRPP*PRGNVR Trigger: ACGCACATTTCCACGTGGCCAGGGAGGCCTCACAAT...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGTTGAGCCCAGGAGTTTaGGATCAGCCTGGGCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRLSPGV*DQPGQH Trigger: ATGTTGCCCAGGCTGATCTCAAACTCCTGGGCTCAA...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCCGCCATGTAAGACATaGCTTTGCTTCTCATTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRPPCKT*LCFSFA Trigger: GGCAAATGAGAAGCAAAGTCATGTCTTACATGGCGG...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTAGCATCACTGATACTTaGACGCTTTTCCTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARSITDT*TLFLTQ Trigger: CTGTGTGAGGAAAAGCGTGCAAGTATCAGTGATGCT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR GCA 90 bp | AGACATGACTTTGCTTCTCATTTGCCTTCCACCATGATTGTGAGGCCTCCCTGGAATTCGAATCCAGACTaGATTCTCCTCAGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RHDFASHLPSTMIVRPPWNSNPD*ILLSFS Trigger: AGAGAAACTGAGGAGAATGCAGTCTGGATTCGAATT...CCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | AGTTGCAGGTCATGTAGGGAGTCCTTTTTAGAATGGCTTCCTCCCTCCATTTTAAAGAAGGAGGAGCTGTaGTTAAGAAACCACGCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SCRSCRESFLEWLPPSILKKEEL*LRNHAR Trigger: ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTT...TAAAATGGAGGGAGGAAGCCATTCTAAAAAGGACTCCCTACATGACCTGCAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGTTTTGCAAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTGCAGCTTTTGGATCCTaGAAACAAGTGCCGCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLCFASCRLCRQSFLEWLAAFGS*KQVPLV Trigger: CACCAGCGGCACTTGTTTGCAGGATCCAAAAGCTGC...AAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTTGCAAAACACAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CCA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCAGCAACAATAACAGAATaGACTCAACTCCATCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPATITE*TQLHPL Trigger: CAAAGGATGGAGTTGAGTCCATTCTGTTATTGTTGC...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | AGTTGCAGGTCATGTAGGGAGTCCTTTTTAGAATGGCTTCCTCCCTCCATTTTAAGTTTGAGATCAGCCTaGGCAACATGGAGAAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCRSCRESFLEWLPPSILSLRSA*ATWRNP Trigger: AGGGTTTCTCCATGTTGCCCAGGCTGATCTCAAACT...TAAAATGGAGGGAGGAAGCCATTCTAAAAAGGACTCCCTACATGACCTGCAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTTTTAGGAGGCTAAAATaGGCAGATTGCTTGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARFRRLK*ADCLSP Trigger: TGGGCTCAAGCAATCTGCCCATTTTAGCCTCCTAAA...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACCTCATGCCTGTGATATaGTTTGGCTGTGTCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYLMPVI*FGCVST Trigger: TGTGGAGACACAGCCAAACCATATCACAGGCATGAG...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTTTGGCTGTGTCTCCACACAAGTGTCACCTTGAATTGTAATAACCCCCATTTTTCCAGGATGCAGTaGTCATCGCAATTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MVWLCLHTSVTLNCNNPHFSRMQ*SSQFGP Trigger: TGGGCCAAATTGCGATGACCACTGCATCCTGGAAAA...ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTGGAGACACAGCCAAACCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGAGACCTCTCCAGAATTaGGAAGAGACAGCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRRPLQN*EETAIE Trigger: TTCTATGGCTGTCTCTTCTCAATTCTGGAGAGGTCT...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR GCA 90 bp | AGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGCAAGTTGCAGATTGTaGAGGCAGTCCTTCTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SCRLCRQSFLEWLPNSILASCRL*RQSFLE Trigger: TTCTAAGAAGGACTGCCTGCACAATCTGCAACTTGC...TAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGCAAACCCAAAAGTCTTaGGCGCTGTGCCATATGCTT | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRQTQKS*ALCHML Trigger: AAGCATATGGCACAGCGCTCAAGACTTTTGGGTTTG...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGACACAAGTGTCACCTTaGATTGTAATAACCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRTQVSP*IVITPM Trigger: CATGGGGGTTATTACAATTCAAGGTGACACTTGTGT...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCTGAACCAAAATTCGAATCCAGACTaGATTCTCCTCAGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAVLLRMASQLHFRALNQNSNPD*ILLSFS Trigger: AGAGAAACTGAGGAGAATGCAGTCTGGATTCGAATT...TTGGTTCAGAGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CCA 90 bp | CAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCAGTCCTTCTTAGAATaGCTTCCCAACTCCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: QIVQAVLLRMASQLHFRAQSFLE*LPNSIL Trigger: TAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTG...AGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | AAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTTCTCCAAATGTTTCTTaGGTTATTCGTTGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLQIVQAVLLRMASQLHFSPNVS*VIRWTL Trigger: GAGAGTCCAACGAATAACTCAAGAAACATTTGGAGA...AAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGTCTCCAAATGTTTCTTaGGTTATTCGTTGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRSPNVS*VIRWTL Trigger: GAGAGTCCAACGAATAACTCAAGAAACATTTGGAGA...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGAGACCTCTCCAGAATTaGGAAGAGACAGCCATAGAA | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRRPLQN*EETAIE Trigger: TTCTATGGCTGTCTCTTCTCAATTCTGGAGAGGTCT...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGACACCCGGCCCAGAGTaGAGTCATTTTTCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRTPGPE*SHFSIS Trigger: TGATATAGAAAAATGACTTCACTCTGGGCCGGGTGT...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | AAAAGTGGTTGTCAAGTCAGTGCACATCCAAGCTTCCAAGATTGGTCAAATTTGAGCATCACTGATACTTaGACGCTTTTCCTCACACAG | + |
|
Preference number: 4 (lower is better) Translates to: KSGCQVSAHPSFQDWSNLSITDT*TLFLTQ Trigger: CTGTGTGAGGAAAAGCGTGCAAGTATCAGTGATGCT...CAAATTTGACCAATCTTGGAAGCTTGGATGTGCACTGACTTGACAACCACTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR GCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGAATTCGAATCCAGACTaGATTCTCCTCAGTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRNSNPD*ILLSFS Trigger: AGAGAAACTGAGGAGAATGCAGTCTGGATTCGAATT...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR GCA 90 bp | TTTTTGTGTTTTGCAAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTTGGTTGTCAAGTCAGTaGACATCCAAGCTTCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLCFASCRLCRQSFLEWLWLSSQ*TSKLPR Trigger: TCTTGGAAGCTTGGATGTGCACTGACTTGACAACCA...AAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTTGCAAAACACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACTTGTCAGTTCATTCATaGGGATTTTCAAGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYLSVHS*GFSRWS Trigger: GGACCATCTTGAAAATCCCCATGAATGAACTGACAA...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTACTCAAGGTCAAGTGTaGGGCCATATATATATATGT | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARTQGQV*GHIYIC Trigger: ACATATATATATATGGCCCCACACTTGACCTTGAGT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACGCAACAATAACAGAATaGACTCAACTCCATCCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYATITE*TQLHPL Trigger: CAAAGGATGGAGTTGAGTCCATTCTGTTATTGTTGC...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGTTTTGAAAGAGGCAACTGGCTTAGTACAAAAATCCATAGTTTATTGGCATTGCACTCCAGCCTaGGCGATAGAAGGAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: QVVLKEATGLVQKSIVYWHCTPA*AIEGDL Trigger: CAAGTCTCCTTCTATCGCCCAGGCTGGAGTGCAATG...CCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTCTTTCAAAACAACTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTAAGTTTCATGAGCTCTaGTGGTTTTATAAATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KCMCNIKKEELCLRNHARKFHEL*WFYKWE Trigger: CTCCCATTTATAAAACCACCAGAGCTCATGAAACTT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTGAAATTGCATATAAATaGTGTCTAACAGGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KLQIVQAVLLRMASQLHFEIAYK*CLTGQH Trigger: ATGCTGCCCTGTTAGACATCATTTATATGCAATTTC...AAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | GTCAAGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTCAACTCCATCCTTTaGATAGACCAATTTCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VKCGAIYIYVLSSQMPQRLNSIL*IDQFHD Trigger: ATCATGAAATTGGTCTATTCAAAGGATGGAGTTGAG...CCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | CAACTCCATTTTAGAGCTCTGAACCAAAGTGATGCCATTTTGTGTATCACTTTTCCGAGGCAGCATAGCTaGTTAATCATTGGTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QLHFRALNQSDAILCITFPRQHS*LIIGWL Trigger: CAACCAACCAATGATTAATCAGCTATGCTGCCTCGG...AAAAGTGATACACAAAATGGCATCACTTTGGTTCAGAGCTCTAAAATGGAGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGCAACATCTTCACAAATaGTGTCTAACAGGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRQHLHK*CLTGQH Trigger: ATGCTGCCCTGTTAGACATCATTTGTGAAGATGTTG...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000439957.7 |
||
| CDS-3UTR GCA 90 bp | GCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTGGGAGACAGATAGAAACCTCCTGAAGTaGTGGGATTACAAGTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARQGVFIEVLGIAIWETDRNLLK*WDYKCE Trigger: CTCACACTTGTAATCCCAGCACTTCAGGAGGTTTCT...ATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | CAAGTTGTTTTGAAAGAGGCAACTGGCTTAGTACAAAAATCCATAGTTTATTGGTTCAACCAGTTCTCCTaGCTCAGCCTCTCGAATAGC | + |
|
Preference number: 4 (lower is better) Translates to: QVVLKEATGLVQKSIVYWFNQFS*LSLSNS Trigger: GCTATTCGAGAGGCTGAGGCAGGAGAACTGGTTGAA...CCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTCTTTCAAAACAACTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACACTCAAGGTCAAGTGTaGGGCCATATATATATATGT | + |
|
Preference number: 4 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYTQGQV*GHIYIC Trigger: ACATATATATATATGGCCCCACACTTGACCTTGAGT...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | AGTTGCAGGTCATGTAGGGAGTCCTTTTTAGAATGGCTTCCTCCCTCCATTTTATTAGGAATTGCAATTTaGGAGACAGATTCAGCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: SCRSCRESFLEWLPPSILLGIAI*ETDSAR Trigger: TCTAGCTGAATCTGTCTCCCAAATTGCAATTCCTAA...TAAAATGGAGGGAGGAAGCCATTCTAAAAAGGACTCCCTACATGACCTGCAACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | AGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAACATCTTGGATACAATaGGACAAACAGAAGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SCRLCRQSFLEWLPNSILTSWIQ*DKQKVQ Trigger: TTGTACCTTCTGTTTGTCCCATTGTATCCAAGATGT...TAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGTCTCCAAATGTTTCTTaGGTTATTCGTTGGACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRSPNVS*VIRWTL Trigger: GAGAGTCCAACGAATAACTCAAGAAACATTTGGAGA...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGCATATCGTGGAGGAATaGATCAGTCCCAACAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRHIVEE*ISPNNY Trigger: ATAATTGTTGGGACTGATTCATTCCTCCACGATATG...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | TTAGTACAAAAATCCATAGTTTATTGGTTGGTGCTGTTGAGGAGTTGTAGTGCTCTGGTATCAGAAGTGTaGGAGTACACTAGGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVQKSIVYWLVLLRSCSALVSEV*EYTRRN Trigger: GTTTCTCCTAGTGTACTCTCACACTTCTGATACCAG...AGCACTACAACTCCTCAACAGCACCAACCAATAAACTATGGATTTTTGTACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR GCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGAGCCATGAACTGAAGTaGATGTGCAATATCAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRSHELK*MCNIKK Trigger: CTTCTTGATATTGCACATGCACTTCAGTTCATGGCT...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGGTTGTCAAGTCAGTGCACATCCAAGCTTCCAAGATTGGTCAAATTTGTTGTCAGTTCATTCATaGGGATTTTCAAGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSGCQVSAHPSFQDWSNLLSVHS*GFSRWS Trigger: GGACCATCTTGAAAATCCCCATGAATGAACTGACAA...CAAATTTGACCAATCTTGGAAGCTTGGATGTGCACTGACTTGACAACCACTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CCA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGTTGTCAGTTCATTCATaGGGATTTTCAAGATGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIYICPVISNATTATVSRLSVHS*GFSRWS Trigger: GGACCATCTTGAAAATCCCCATGAATGAACTGACAA...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR TCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGGAAATTGCATATAAATaGTGTCTAACAGGGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EIKFSRMQWSSQFGPIQREIAYK*CLTGQH Trigger: ATGCTGCCCTGTTAGACATCATTTATATGCAATTTC...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR TCA 90 bp | CAACTCCATTTTAGAGCTCTGAACCAAAGTGATGCCATTTTGTGTATCACTTTTAGCTCTGAACCAAAGTaGTGCCATTTTGTGTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: QLHFRALNQSDAILCITFSSEPK*CHFVYH Trigger: GTGATACACAAAATGGCATCACTTTGGTTCAGAGCT...AAAAGTGATACACAAAATGGCATCACTTTGGTTCAGAGCTCTAAAATGGAGTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CCA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGAAATCCATAGTTTATTaGTTGGTGCTGTTGAGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRKSIVY*LVLLRS Trigger: ACTCCTCAACAGCACCAACCAATAAACTATGGATTT...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CCA 90 bp | CAAGTTGTTTTGAAAGAGGCAACTGGCTTAGTACAAAAATCCATAGTTTATTGGTTTCATGAGCTCTGGTaGTTTTATAAATGGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QVVLKEATGLVQKSIVYWFHELW*FYKWEF Trigger: AAACTCCCATTTATAAAACCACCAGAGCTCATGAAA...CCAATAAACTATGGATTTTTGTACTAAGCCAGTTGCCTCTTTCAAAACAACTTG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS TCA 90 bp | GTCCAGGCCGTTCCGAACGCGTTCCGTTGTTCCTCCTCAGGTCCCTaGTGGCGCGTCCCGCCGAGCCCCTTCCTGCCGCCCGTCGGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VQAVPNAFRCSSSGP*WRVPPSPFLPPVGP Trigger: GGGGCCGACGGGCGGCAGGAAGGGGCTCGGCGGGACGCGCCATCAGGGACCTGAGGAGGAACAACGGAACGCGTTCGGAACGGCCTGGAC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS TCA 90 bp | CCGGCTACTGCCGCTTCAGTTCTCCCGGTGTGGCCACGAGTCGGGTaGGTCTCGGGAGTCCAGGCCGTTCCGAACGCGTTCCGTTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PATAASVLPVWPRVG*VSGVQAVPNAFRCS Trigger: GGAACAACGGAACGCGTTCGGAACGGCCTGGACTCCCGAGACTCACCCGACTCGTGGCCACACCGGGAGAACTGAAGCGGCAGTAGCCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS GCA 90 bp | TCCTCAAGAGCTGTTCCCGCTCGCCGCGCCTTCAAAGCCACCAATTaGAGTTCCCGCCGCCTCCAAGCTCCGCCCACCGGAGCACAAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SSRAVPARRAFKATN*SSRRLQAPPTGAQA Trigger: TGCTTGTGCTCCGGTGGGCGGAGCTTGGAGGCGGCGGGAACTGCAATTGGTGGCTTTGAAGGCGCGGCGAGCGGGAACAGCTCTTGAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS GCA 90 bp | GCCCGAGACCCAGCGCCAATCCTGCGCCTCACAACGTGCGACAATTaGGAAAAAGCCACCCCCGAGGCCTGGGATCTGGCTTCCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: ARDPAPILRLTTCDN*EKATPEAWDLASSR Trigger: CCTTGAGGAAGCCAGATCCCAGGCCTCGGGGGTGGCTTTTTCGCAATTGTCGCACGTTGTGAGGCGCAGGATTGGCGCTGGGTCTCGGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000564669.5 |
||
| CDS GCA 90 bp | CCAGTAGTGGACTTACACATAGGCTCCGTTAGGACCTGGCTTATGTaGTCGGCTTGTGGCTTAGACGCTGCCGTGCCCCAGTGGACTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVVDLHIGSVRTWLM*SACGLDAAVPQWTH Trigger: GTGAGTCCACTGGGGCACGGCAGCGTCTAAGCCACAAGCCGAGCACATAAGCCAGGTCCTAACGGAGCCTATGTGTAAGTCCACTACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CCA 90 bp | AACCTTGCACCAGTAGTGGACTTACACATAGGCTCCGTTAGGACCTaGCTTATGTGCTCGGCTTGTGGCTTAGACGCTGCCGTGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NLAPVVDLHIGSVRT*LMCSACGLDAAVPQ Trigger: CTGGGGCACGGCAGCGTCTAAGCCACAAGCCGAGCACATAAGCCAGGTCCTAACGGAGCCTATGTGTAAGTCCACTACTGGTGCAAGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS-3UTR CAA 90 bp | ACCATGATTGTGAGGCCTCCCTGGCCACGTGGAAATGTGCGTCAGTTAAGCCTCCTTGAGCCCAGGAGTTaGAGATCAGCCTGGGCAACA | + |
|
Preference number: 5 (lower is better) Translates to: TMIVRPPWPRGNVRQLSLLEPRS*RSAWAT Trigger: TGTTGCCCAGGCTGATCTCAAACTCCTGGGCTCAAG...GAGGCTTAACTGACGCACATTTCCACGTGGCCAGGGAGGCCTCACAATCATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | CACACAAGTGTCACCTTGAATTGTAATAACCCCCATGTGACAAGGGCAGGGCCAGCTAAAATGGGCAGATaGCTTGAGCCCAGGAGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HTSVTLNCNNPHVTRAGPAKMGR*LEPRSL Trigger: CAAACTCCTGGGCTCAAGCAATCTGCCCATTTTAGC...TGGCCCTGCCCTTGTCACATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | AGACATGACTTTGCTTCTCATTTGCCTTCCACCATGATTGTGAGGCCTCCCTGGAGGCCTTCAGGATTGTaGTCAGTTCATTCATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHDFASHLPSTMIVRPPWRPSGL*SVHSWG Trigger: TCCCCATGAATGAACTGACAACAATCCTGAAGGCCT...CCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | CAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCCCAGGCCTTCAGGATaGTTGTCAGTTCATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: QIVQAVLLRMASQLHFRAPRPSG*LSVHSW Trigger: CCATGAATGAACTGACAACAATCCTGAAGGCCTGGG...AGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACCCCAGGCCTTCAGGATaGTTGTCAGTTCATTCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYPRPSG*LSVHSW Trigger: CCATGAATGAACTGACAACAATCCTGAAGGCCTGGG...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACGCCAGGTGGAGATACTaGAGTCATGGGAACGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYARWRY*SHGNDF Trigger: GAAATCGTTCCCATGACTCAAGTATCTCCACCTGGC...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | AGACATGACTTTGCTTCTCATTTGCCTTCCACCATGATTGTGAGGCCTCCCTGGCACACAAGTGTCACCTaGAATTGTAATAACCCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: RHDFASHLPSTMIVRPPWHTSVT*NCNNPH Trigger: ATGGGGGTTATTACAATTCAAGGTGACACTTGTGTG...CCAGGGAGGCCTCACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTCATGTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGGCCTTCAGGATTGTaGTCAGTTCATTCATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KLQIVQAVLLRMASQLHFRPSGL*SVHSWG Trigger: TCCCCATGAATGAACTGACAACAATCCTGAAGGCCT...AAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGGCCTTCAGGATTGTaGTCAGTTCATTCATGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYRPSGL*SVHSWG Trigger: TCCCCATGAATGAACTGACAACAATCCTGAAGGCCT...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACACAAACCCAAAAGTCTaGAGCGCTGTGCCATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYTNPKV*SAVPYA Trigger: AGCATATGGCACAGCGCTCAAGACTTTTGGGTTTGT...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CAA 90 bp | CATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACAGTTAGCAGGCAAGGTTTTGCCATGTaGGCTAGGCTGGTCTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HIYICPVISNATTATVSRQGFAM*ARLVSN Trigger: GTTCGAGACCAGCCTAGCCAACATGGCAAAACCTTG...CCTGCTAACTGTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | AGTTGCAGGTCATGTAGGGAGTCCTTTTTAGAATGGCTTCCTCCCTCCATTTTATTCACCTTCACCATGTaGCTAAGGCTAGTCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: SCRSCRESFLEWLPPSILFTFTM*LRLVSN Trigger: GTTTGAGACTAGCCTTAGCAACATGGTGAAGGTGAA...TAAAATGGAGGGAGGAAGCCATTCTAAAAAGGACTCCCTACATGACCTGCAACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | GAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCCCAATTCAAAGGTCAGCTAGAAGCCACTaGTGTTCTGAAGAGAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: EIKFSRMQWSSQFGPIQRSARSH*CSEERG Trigger: CCCTCTCTCTTCAGAACACAAGTGGCTTCTAGCTGA...CCTTTGAATTGGGCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | CAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTTCACATTTTCCTTTTTaGATCAAGATCCGAGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QIVQAVLLRMASQLHFRASHFPF*IKIRGS Trigger: GCTGCCTCGGATCTTGATCAAAAAAGGAAAATGTGA...AGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CAA 90 bp | TGTAGTGCTGGTGAAATAAAATTTTCCAGGATGCAGTGGTCATCGCAATTTGGCGACTTTGCTTCTCATTaGCCTTCCACCATGATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: CSAGEIKFSRMQWSSQFGDFASH*PSTMIV Trigger: CACAATCATGGTGGAAGGCAAATGAGAAGCAAAGTC...GCCAAATTGCGATGACCACTGCATCCTGGAAAATTTTATTTCACCAGCACTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | CAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTAGAGCTCTGAACCAAATCTCCAAATGTTTCTaGAGTTATTCGTTGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: QAVLLRMASQLHFRALNQISKCF*SYSLDS Trigger: AGAGTCCAACGAATAACTCAAGAAACATTTGGAGAT...TTGGTTCAGAGCTCTAAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CAA 90 bp | AAGTGCATGTGCAATATCAAGAAGGAGGAGCTGTGCTTAAGAAACCACGCACGTATCTCCAAATGTTTCTaGAGTTATTCGTTGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: KCMCNIKKEELCLRNHARISKCF*SYSLDS Trigger: AGAGTCCAACGAATAACTCAAGAAACATTTGGAGAT...ACGTGCGTGGTTTCTTAAGCACAGCTCCTCCTTCTTGATATTGCACATGCACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CAA 90 bp | GCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTGGGAGACAGATACAAACCCAAAAGTCTaGAGCGCTGTGCCATATGCT | + |
|
Preference number: 5 (lower is better) Translates to: ARQGVFIEVLGIAIWETDTNPKV*SAVPYA Trigger: AGCATATGGCACAGCGCTCAAGACTTTTGGGTTTGT...ATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTGCAGATTGTGCAGGCAGTCCTTCTTAGAATGGCTTCCCAACTCCATTTTCTGATTAATCATTGGTaGGTTGGCCACAGATTAGTT | + |
|
Preference number: 5 (lower is better) Translates to: KLQIVQAVLLRMASQLHFLINHW*VGHRLV Trigger: AACTAATCTGTGGCCAACCAACCAATGATTAATCAG...AAAATGGAGTTGGGAAGCCATTCTAAGAAGGACTGCCTGCACAATCTGCAACTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CAA 90 bp | TCCCAACTCCATTTTAGAGCTCTGAACCAAAGTGATGCCATTTTGTGTATCACTTTTGTGTTTTGCAAGTaGCAGATTGTGCAGGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQLHFRALNQSDAILCITFVFCK*QIVQAV Trigger: GACTGCCTGCACAATCTGCAACTTGCAAAACACAAA...AGTGATACACAAAATGGCATCACTTTGGTTCAGAGCTCTAAAATGGAGTTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS-3UTR CAA 90 bp | AGTGTGGGGCCATATATATATATGTCCTGTCATCTCAAATGCCACAACGGCTACATCTCCAAATGTTTCTaGAGTTATTCGTTGGACTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVGPYIYMSCHLKCHNGYISKCF*SYSLDS Trigger: AGAGTCCAACGAATAACTCAAGAAACATTTGGAGAT...GTAGCCGTTGTGGCATTTGAGATGACAGGACATATATATATATGGCCCCACACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000305850.10 ENST00000439957.7 |
||
| CDS-3UTR CAA 90 bp | GCAAGACAAGGTGTTTTTATTGAGGTCTTAGGAATTGCAATTTGGGAGACAGATAAAATCCATAGTTTATaGGTTGGTGCTGTTGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ARQGVFIEVLGIAIWETDKIHSL*VGAVEE Trigger: CTCCTCAACAGCACCAACCAATAAACTATGGATTTT...ATCTGTCTCCCAAATTGCAATTCCTAAGACCTCAATAAAAACACCTTGTCTTGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305850.10 |
||
| CDS TCA 72 bp | GTTCCGAACGCGTTCCGTTGTTCCTCCTCAGGTCCCTaGTGGCGCGTCCCGCCGAGCCCCTTCCTGCCGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VPNAFRCSSSGP*WRVPPSPFLPP Trigger: GGGCGGCAGGAAGGGGCTCGGCGGGACGCGCCATCAGGGACCTGAGGAGGAACAACGGAACGCGTTCGGAAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS GCA 72 bp | GCTGTTCCCGCTCGCCGCGCCTTCAAAGCCACCAATTaGAGTTCCCGCCGCCTCCAAGCTCCGCCCACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: AVPARRAFKATN*SSRRLQAPPTG Trigger: TCCGGTGGGCGGAGCTTGGAGGCGGCGGGAACTGCAATTGGTGGCTTTGAAGGCGCGGCGAGCGGGAACAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CCA 72 bp | GAGCCGGGAGCACGGTGGAGCGGTGGAGGGCGTCACTaGGTTTCGGCGTCTGGCAAGCGGTTCAGCTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: EPGARWSGGGRH*VSASGKRFSCL Trigger: CAGACAGCTGAACCGCTTGCCAGACGCCGAAACCCAGTGACGCCCTCCACCGCTCCACCGTGCTCCCGGCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CAA 72 bp | AGCTGTTCCCGCTCGCCGCGCCTTCAAAGCCACCAATaGCAGTTCCCGCCGCCTCCAAGCTCCGCCCACCGG | + |
|
Preference number: 6 (lower is better) Translates to: SCSRSPRLQSHQ*QFPPPPSSAHR Trigger: CCGGTGGGCGGAGCTTGGAGGCGGCGGGAACTGCAATTGGTGGCTTTGAAGGCGCGGCGAGCGGGAACAGCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CAA 90 bp | AGTCGGGTGAGTCTCGGGAGTCCAGGCCGTTCCGAACGCGTTCCGTaGTTCCTCCTCAGGTCCCTGATGGCGCGTCCCGCCGAGCCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRVSLGSPGRSERVP*FLLRSLMARPAEPL Trigger: AAGGGGCTCGGCGGGACGCGCCATCAGGGACCTGAGGAGGAACAACGGAACGCGTTCGGAACGGCCTGGACTCCCGAGACTCACCCGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CAA 90 bp | CGCCTCCAAGCTCCGCCCACCGGAGCACAAGCATCAGGCTGTGTCTaGGGCACAGGGGACTGCACGGGGGAGCGACTGAAGCGAAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: RLQAPPTGAQASGCV*GTGDCTGERLKRRS Trigger: CGACCTTCGCTTCAGTCGCTCCCCCGTGCAGTCCCCTGTGCCCAAGACACAGCCTGATGCTTGTGCTCCGGTGGGCGGAGCTTGGAGGCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS TCA 72 bp | GCCGCTTCAGTTCTCCCGGTGTGGCCACGAGTCGGGTaGGTCTCGGGAGTCCAGGCCGTTCCGAACGCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: AASVLPVWPRVG*VSGVQAVPNAF Trigger: GAACGCGTTCGGAACGGCCTGGACTCCCGAGACTCACCCGACTCGTGGCCACACCGGGAGAACTGAAGCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CAA 72 bp | AGTCTCGGGAGTCCAGGCCGTTCCGAACGCGTTCCGTaGTTCCTCCTCAGGTCCCTGATGGCGCGTCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLGSPGRSERVP*FLLRSLMARPA Trigger: GGCGGGACGCGCCATCAGGGACCTGAGGAGGAACAACGGAACGCGTTCGGAACGGCCTGGACTCCCGAGACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CAA 90 bp | CTCCTCAAGAGCTGTTCCCGCTCGCCGCGCCTTCAAAGCCACCAATaGCAGTTCCCGCCGCCTCCAAGCTCCGCCCACCGGAGCACAAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLKSCSRSPRLQSHQ*QFPPPPSSAHRSTS Trigger: GCTTGTGCTCCGGTGGGCGGAGCTTGGAGGCGGCGGGAACTGCAATTGGTGGCTTTGAAGGCGCGGCGAGCGGGAACAGCTCTTGAGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS GCA 72 bp | GCACAAGCATCAGGCTGTGTCTTGGGCACAGGGGACTaGACGGGGGAGCGACTGAAGCGAAGGTCGCCGAGC | + |
|
Preference number: 6 (lower is better) Translates to: AQASGCVLGTGD*TGERLKRRSPS Trigger: GCTCGGCGACCTTCGCTTCAGTCGCTCCCCCGTGCAGTCCCCTGTGCCCAAGACACAGCCTGATGCTTGTGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS GCA 72 bp | GCCCGAGACCCAGCGCCAATCCTGCGCCTCACAACGTaGGACAATTGCGAAAAAGCCACCCCCGAGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ARDPAPILRLTT*DNCEKATPEAW Trigger: CCAGGCCTCGGGGGTGGCTTTTTCGCAATTGTCGCACGTTGTGAGGCGCAGGATTGGCGCTGGGTCTCGGGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000564669.5 |
||
| CDS CAA 72 bp | CCCAGCGCCAATCCTGCGCCTCACAACGTGCGACAATaGCGAAAAAGCCACCCCCGAGGCCTGGGATCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSANPAPHNVRQ*RKSHPRGLGSG Trigger: GCCAGATCCCAGGCCTCGGGGGTGGCTTTTTCGCAATTGTCGCACGTTGTGAGGCGCAGGATTGGCGCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000564669.5 |
||
| CDS CAA 90 bp | AGCCCGAGACCCAGCGCCAATCCTGCGCCTCACAACGTGCGACAATaGCGAAAAAGCCACCCCCGAGGCCTGGGATCTGGCTTCCTCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SPRPSANPAPHNVRQ*RKSHPRGLGSGFLK Trigger: CTTGAGGAAGCCAGATCCCAGGCCTCGGGGGTGGCTTTTTCGCAATTGTCGCACGTTGTGAGGCGCAGGATTGGCGCTGGGTCTCGGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000564669.5 |
||
| CDS GCA 72 bp | CCAGCGCCAATCCTGCGCCTCACAACGTGCGACAATTaGGAAAAAGCCACCCCCGAGGCCTGGGATCTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PAPILRLTTCDN*EKATPEAWDLA Trigger: AGCCAGATCCCAGGCCTCGGGGGTGGCTTTTTCGCAATTGTCGCACGTTGTGAGGCGCAGGATTGGCGCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000564669.5 |
||
| CDS GCA 72 bp | GTTCCTCGCCCCGAGCCCGAGACCCAGCGCCAATCCTaGGCCTCACAACGTGCGACAATTGCGAAAAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VPRPEPETQRQS*ASQRATIAKKP Trigger: TGGCTTTTTCGCAATTGTCGCACGTTGTGAGGCGCAGGATTGGCGCTGGGTCTCGGGCTCGGGGCGAGGAAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564669.5 |
||
| CDS GCA 72 bp | GACTTACACATAGGCTCCGTTAGGACCTGGCTTATGTaGTCGGCTTGTGGCTTAGACGCTGCCGTGCCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: DLHIGSVRTWLM*SACGLDAAVPQ Trigger: CTGGGGCACGGCAGCGTCTAAGCCACAAGCCGAGCACATAAGCCAGGTCCTAACGGAGCCTATGTGTAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS CAA 90 bp | CAGAAGGTACAAGTCCTTCTGCCAGCTGCTCGGGTCCTGGGTCCCTaGACTGTGGCTTCCAGAATAGCAGAGCAGCTTTTGGATCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QKVQVLLPAARVLGP*TVASRIAEQLLDPA Trigger: TGCAGGATCCAAAAGCTGCTCTGCTATTCTGGAAGCCACAGTCAAGGGACCCAGGACCCGAGCAGCTGGCAGAAGGACTTGTACCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||
| CDS CCA 72 bp | CCAGTAGTGGACTTACACATAGGCTCCGTTAGGACCTaGCTTATGTGCTCGGCTTGTGGCTTAGACGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PVVDLHIGSVRT*LMCSACGLDAA Trigger: GGCAGCGTCTAAGCCACAAGCCGAGCACATAAGCCAGGTCCTAACGGAGCCTATGTGTAAGTCCACTACTGG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000299572.9 |
||
| CDS GCA 72 bp | TGTGGCTTCCAGAATAGCAGAGCAGCTTTTGGATCCTaGAAACAAGTGCCGCTGGTGCTAAGGATTTCAATG | + |
|
Preference number: 6 (lower is better) Translates to: CGFQNSRAAFGS*KQVPLVLRISM Trigger: CATTGAAATCCTTAGCACCAGCGGCACTTGTTTGCAGGATCCAAAAGCTGCTCTGCTATTCTGGAAGCCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000393335.7 |
||