Pregenerated sensors for CENPK (Homo sapiens)
Ensembl gene IDs: ENSG00000123219Ensembl transcript IDs: ENST00000242872.7, ENST00000396679.6, ENST00000505960.5, ENST00000506282.6, ENST00000508311.1, ENST00000508421.5, ENST00000509397.5, ENST00000510354.1, ENST00000510693.5, ENST00000510768.5, ENST00000514814.5
Found 82 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGTATCACAATTATAAATTTTTATGCTGTCTTCTACTTCCTAACTaGAGACAAAAACATAGTTGGCACCAGCTGGACAAGACAGAAGAC | + |
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Preference number: 1 (lower is better) Translates to: EYHNYKFLCCLLLPN*RQKHSWHQLDKTED Trigger: GTCTTCTGTCTTGTCCAGCTGGTGCCAACTATGTTTTTGTCTTCAGTTAGGAAGTAGAAGACAGCATAAAAATTTATAATTGTGATACTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| 3UTR-3UTR CCA 90 bp | CAAAAACATAGTTGGCACCAGCTGGACAAGACAGAAGACATACAAACTATGTGTACCACTAACCAAGCATaGTGGCACACACTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: QKHSWHQLDKTEDIQTMCTTNQA*WHTLVV Trigger: GACTACAAGTGTGTGCCACCATGCTTGGTTAGTGGT...ACACATAGTTTGTATGTCTTCTGTCTTGTCCAGCTGGTGCCAACTATGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| 3UTR-3UTR CCA 90 bp | GGAAAATGGTCTTCTAGAAACTCGCCCAAGGTACTCAAGAGTTTCTCCTTATATAGGGAATTGCAAGCATaGTGGCACACACTTGTAGTC | + |
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Preference number: 2 (lower is better) Translates to: GKWSSRNSPKVLKSFSLYRELQA*WHTLVV Trigger: GACTACAAGTGTGTGCCACCATGCTTGCAATTCCCT...ATATAAGGAGAAACTCTTGAGTACCTTGGGCGAGTTTCTAGAAGACCATTTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| 3UTR-3UTR TCA 90 bp | ATTCCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCTTTTCCTAATGTTATaGGAACGTCTTCAGTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: IPLSVAVHPTTVVPFLSLLFLML*ERLQSR Trigger: CCTTGACTGAAGACGTTCTCATAACATTAGGAAAAG...AAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| 3UTR-3UTR CCA 90 bp | GTGAGATTACCAAAATGTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGACAAAAACATAGTTaGCACCAGCTGGACAAGACA | + |
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Preference number: 2 (lower is better) Translates to: VRLPKCDTGSPQTEFVKHRQKHS*HQLDKT Trigger: TGTCTTGTCCAGCTGGTGCCAACTATGTTTTTGTCT...ATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCACATTTTGGTAATCTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| 3UTR-3UTR CAA 90 bp | CCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTTACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: PLSVAVHPTTVVPFLSLPYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...AGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| 3UTR CCA 72 bp | TTCCTAACTGAAGACAAAAACATAGTTGGCACCAGCTaGACAAGACAGAAGACATACAAACTATGTGTCCCT | + |
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Preference number: 3 (lower is better) Translates to: FLTEDKNIVGTS*TRQKTYKLCVP Trigger: AGGGACACATAGTTTGTATGTCTTCTGTCTTGTCCAGCTGGTGCCAACTATGTTTTTGTCTTCAGTTAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| 3UTR-3UTR CAA 90 bp | TCCTTTAACTTTTCATTCTTTGACTCCTTAGTGGACAGTACCATTTCAAGATCTCTTCAGTCAAGGGAATaGCAAGCATGGTGGCACACA | + |
|
Preference number: 3 (lower is better) Translates to: SFNFSFFDSLVDSTISRSLQSRE*QAWWHT Trigger: TGTGTGCCACCATGCTTGCAATTCCCTTGACTGAAG...AGATCTTGAAATGGTACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTGTAGTACATTAAGAGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTTACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: LCSTLRDSIICCCSSNHRYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...ACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAATGTACTACACAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| 3UTR-3UTR CAA 90 bp | TGTAGTACATTAAGAGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 3 (lower is better) Translates to: CSTLRDSIICCCSSNHRCYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...ACAACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAATGTACTACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| 3UTR-3UTR CAA 90 bp | ACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTATCTTGTCTCAGCTTTaGGAACTCCAAGTAGATTAT | + |
|
Preference number: 3 (lower is better) Translates to: TTVVPFLSLPLTFHSLTPILSQL*ELQVDY Trigger: ATAATCTACTTGGAGTTCCAAAAGCTGAGACAAGAT...AGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGAACAACGGTGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| 3UTR TCA 72 bp | AATTATAAATTTTTATGCTGTCTTCTACTTCCTAACTaGAGACAAAAACATAGTTGGCACCAGCTGGACAAG | + |
|
Preference number: 3 (lower is better) Translates to: NYKFLCCLLLPN*RQKHSWHQLDK Trigger: CTTGTCCAGCTGGTGCCAACTATGTTTTTGTCTTCAGTTAGGAAGTAGAAGACAGCATAAAAATTTATAATT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR GCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGAGGTCGCCTAGGCGCTaGGCAGGAAGCGCTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYARSPRR*AGSACQ Trigger: CTGGCAAGCGCTTCCTGCGCAGCGCCTAGGCGACCT...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396679.6 ENST00000514814.5 |
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| CDS-3UTR TCA 90 bp | GTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGAGTGTCTGCAAAGTAAGATCAAAGACCACTaGTCACAGATCCCCCAACCA | + |
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Preference number: 4 (lower is better) Translates to: VTQARHKLNLLNIECLQSKIKDH*SQIPQP Trigger: TGGTTGGGGGATCTGTGATCAGTGGTCTTTGATCTT...ACTTTGCAGACACTCTATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | CCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTCTTTTCCTAATGTTATaGGAACGTCTTCAGTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLSVAVHPTTVVPFLSLPLFLML*ERLQSR Trigger: CCTTGACTGAAGACGTTCTCATAACATTAGGAAAAG...AGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| CDS-3UTR GCA 90 bp | ATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACGATTCCATTATCTGTTaGTGTTCATCCAACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: ICCCSSNHRCSLSKSSFNDSIIC*CSSNHR Trigger: ACGGTGGTTGGATGAACAGCAACAGATAATGGAATC...GTTAAAGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| CDS-3UTR CCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGTCGGGTTGGATCTTCTaGATGTCTCAAGGCAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYASGWIF*MSQGNS Trigger: GGAATTGCCTTGAGACATCCAGAAGATCCAACCCGA...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | TACCAAAATGTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGAGTGTACCACTAACCAAGCATaGTGGCACACACTTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: YQNVTQARHKLNLLNIECTTNQA*WHTLVV Trigger: GACTACAAGTGTGTGCCACCATGCTTGGTTAGTGGT...ACACTCTATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCACATTTTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | ATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACTTTTCTGCCATTGACTaGGTTCAGCGGTTAAACATT | + |
|
Preference number: 4 (lower is better) Translates to: ICCCSSNHRCSLSKSSFNFSAID*VQRLNI Trigger: AATGTTTAACCGCTGAACTCAGTCAATGGCAGAAAA...GTTAAAGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000510768.5 |
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| CDS-3UTR TCA 90 bp | CAAAAACATAGTTGGCACCAGCTGGACAAGACAGAAGACATACAAACTATGTGTAACAGAACCAGAAAATaGTGGCACCCAGATCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QKHSWHQLDKTEDIQTMCNRTRK*WHPDLE Trigger: TTCAAGATCTGGGTGCCATCATTTTCTGGTTCTGTT...ACACATAGTTTGTATGTCTTCTGTCTTGTCCAGCTGGTGCCAACTATGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | ATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACAGAACCAGAAAATaGTGGCACCCAGATCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IICCCSSNHRCSLSKSSFNRTRK*WHPDLE Trigger: TTCAAGATCTGGGTGCCATCATTTTCTGGTTCTGTT...AAAGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| CDS-3UTR GCA 90 bp | CTGTGTAGTACATTAAGAGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTGATTCCATTATCTGTTaGTGTTCATCCAACCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: LCSTLRDSIICCCSSNHRDSIIC*CSSNHR Trigger: ACGGTGGTTGGATGAACAGCAACAGATAATGGAATC...ACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAATGTACTACACAG 41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| CDS-3UTR GCA 90 bp | CACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTATTCAGTCAAGGGAATTaGAAGCATGGTGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: HRCSLSKSSFNFSFFDSLFSQGN*KHGGTH Trigger: GTGTGTGCCACCATGCTTGCAATTCCCTTGACTGAA...TAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGAACAACGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR GCA 90 bp | GTGAGATTACCAAAATGTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATACTGTCTTACACAGGTaGAGCTTGTGGTTCCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VRLPKCDTGSPQTEFVKHTVLHR*SLWFLK Trigger: TTTGAGGAACCACAAGCTGCACCTGTGTAAGACAGT...ATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCACATTTTGGTAATCTCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR CCA 90 bp | TCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTAGTGGACAGTAGGGAATTGCAAGCATaGTGGCACACACTTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: SLSKSSFNFSFFDSLVDSRELQA*WHTLVV Trigger: GACTACAAGTGTGTGCCACCATGCTTGCAATTCCCT...ACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR CCA 90 bp | CACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTAAGGGAATTGCAAGCATaGTGGCACACACTTGTAGTC | + |
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Preference number: 4 (lower is better) Translates to: HRCSLSKSSFNFSFFDSLRELQA*WHTLVV Trigger: GACTACAAGTGTGTGCCACCATGCTTGCAATTCCCT...TAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGAACAACGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR CCA 90 bp | CAAAAACATAGTTGGCACCAGCTGGACAAGACAGAAGACATACAAACTATGTGTAGACAAAAACATAGTTaGCACCAGCTGGACAAGACA | + |
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Preference number: 4 (lower is better) Translates to: QKHSWHQLDKTEDIQTMCRQKHS*HQLDKT Trigger: TGTCTTGTCCAGCTGGTGCCAACTATGTTTTTGTCT...ACACATAGTTTGTATGTCTTCTGTCTTGTCCAGCTGGTGCCAACTATGTTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | GTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGAGTGTCTGCAAAGTGGATCTAGATCCTCCTaGTTCATTGATATATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: VTQARHKLNLLNIECLQSGSRSS*FIDICF Trigger: AAAGCATATATCAATGAATCAGGAGGATCTAGATCC...ACTTTGCAGACACTCTATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGAACAGAACCAGAAAATaGTGGCACCCAGATCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYANRTRK*WHPDLE Trigger: TTCAAGATCTGGGTGCCATCATTTTCTGGTTCTGTT...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR GCA 90 bp | AACTCTTCTTTTCCTAATGTTATGAGAACGTCTTCAGTCAAGGGAATTGCAAGCGATTCCATTATCTGTTaGTGTTCATCCAACCACCGT | + |
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Preference number: 4 (lower is better) Translates to: NSSFPNVMRTSSVKGIASDSIIC*CSSNHR Trigger: ACGGTGGTTGGATGAACAGCAACAGATAATGGAATC...GCTTGCAATTCCCTTGACTGAAGACGTTCTCATAACATTAGGAAAAGAAGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR GCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGGATTCCATTATCTGTTaGTGTTCATCCAACCACCGT | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYADSIIC*CSSNHR Trigger: ACGGTGGTTGGATGAACAGCAACAGATAATGGAATC...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR GCA 90 bp | TCCTTTAACTTTTCATTCTTTGACTCCTTAGTGGACAGTACCATTTCAAGATCTTTCAGTCAAGGGAATTaGAAGCATGGTGGCACACAC | + |
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Preference number: 4 (lower is better) Translates to: SFNFSFFDSLVDSTISRSFSQGN*KHGGTH Trigger: GTGTGTGCCACCATGCTTGCAATTCCCTTGACTGAA...AGATCTTGAAATGGTACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR CCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATTCGGGTTGGATCTTCTaGATGTCTCAAGGCAATTCC | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYSGWIF*MSQGNS Trigger: GGAATTGCCTTGAGACATCCAGAAGATCCAACCCGA...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | TCTTCTTTTCCTAATGTTATGAGAACGTCTTCAGTCAAGGGAATTGCAAGCATGAAGCTGTATGTAACCTaGAAGAGGGTCATCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: SSFPNVMRTSSVKGIASMKLYVT*KRVINR Trigger: TCTGTTGATGACCCTCTTCCAGGTTACATACAGCTT...CATGCTTGCAATTCCCTTGACTGAAGACGTTCTCATAACATTAGGAAAAGAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000505960.5 |
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| CDS-3UTR CCA 90 bp | GTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGAGTGTCTGCAAAGTCCTTATAAGAAAAACTaGAAGAGGGTCATCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: VTQARHKLNLLNIECLQSPYKKN*KRVINR Trigger: TCTGTTGATGACCCTCTTCCAGTTTTTCTTATAAGG...ACTTTGCAGACACTCTATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | ATTAAGAGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCGGATCTAGATCCTCCTaGTTCATTGATATATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: IKRFHYLLLFIQPPLFPFGSRSS*FIDICF Trigger: AAAGCATATATCAATGAATCAGGAGGATCTAGATCC...GAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000510768.5 |
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| CDS-3UTR TCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGTTTTCTGCCATTGACTaGGTTCAGCGGTTAAACATT | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAFSAID*VQRLNI Trigger: AATGTTTAACCGCTGAACTCAGTCAATGGCAGAAAA...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR TCA 90 bp | ACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTTTTCTGCCATTGACTaGGTTCAGCGGTTAAACATT | + |
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Preference number: 4 (lower is better) Translates to: TTVVPFLSLPLTFHSLTPFSAID*VQRLNI Trigger: AATGTTTAACCGCTGAACTCAGTCAATGGCAGAAAA...AGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGAACAACGGTGGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000510768.5 |
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| CDS-3UTR TCA 90 bp | GTGAGATTACCAAAATGTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATTTTTCTGCCATTGACTaGGTTCAGCGGTTAAACATT | + |
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Preference number: 4 (lower is better) Translates to: VRLPKCDTGSPQTEFVKHFSAID*VQRLNI Trigger: AATGTTTAACCGCTGAACTCAGTCAATGGCAGAAAA...ATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCACATTTTGGTAATCTCAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR TCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGCTTTTCCTAATGTTATaGGAACGTCTTCAGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYALFLML*ERLQSR Trigger: CCTTGACTGAAGACGTTCTCATAACATTAGGAAAAG...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR GCA 90 bp | ATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTGAGAGAATCATCATCTaGAGAATCTCTTCTTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: IICCCSSNHRCSLSKSSFERIII*RISSFP Trigger: AGGAAAAGAAGAGATTCTGCAGATGATGATTCTCTC...AAAGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| CDS-3UTR CCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGCAGCTCAACATAAGGTaGCCAAAAGGAATCACTAAT | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAQLNIR*PKGITN Trigger: ATTAGTGATTCCTTTTGGCCACCTTATGTTGAGCTG...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | CTGTGTAGTACATTAAGAGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTCCTTATAAGAAAAACTaGAAGAGGGTCATCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: LCSTLRDSIICCCSSNHRPYKKN*KRVINR Trigger: TCTGTTGATGACCCTCTTCCAGTTTTTCTTATAAGG...ACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTCTTAATGTACTACACAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| CDS-3UTR CCA 90 bp | CGTTGTTCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTAGTGAAGAGGACACCCAACTaGTTTGTAGGAGAGAATCAT | + |
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Preference number: 4 (lower is better) Translates to: RCSLSKSSFNFSFFDSLVKRTPN*FVGENH Trigger: ATGATTCTCTCCTACAAACCAGTTGGGTGTCCTCTT...CACTAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGAACAACG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| CDS-3UTR TCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGGGATCTAGATCCTCCTaGTTCATTGATATATGCTTT | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAGSRSS*FIDICF Trigger: AAAGCATATATCAATGAATCAGGAGGATCTAGATCC...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000514814.5 |
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| CDS-3UTR TCA 90 bp | TCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTAGTGGACAGTCTTTTCCTAATGTTATaGGAACGTCTTCAGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: SLSKSSFNFSFFDSLVDSLFLML*ERLQSR Trigger: CCTTGACTGAAGACGTTCTCATAACATTAGGAAAAG...ACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| CDS-3UTR TCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATAACAGAACCAGAAAATaGTGGCACCCAGATCTTGAA | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYNRTRK*WHPDLE Trigger: TTCAAGATCTGGGTGCCATCATTTTCTGGTTCTGTT...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR GCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGATTCCATTATCTGTTaGTGTTCATCCAACCACCGT | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYDSIIC*CSSNHR Trigger: ACGGTGGTTGGATGAACAGCAACAGATAATGGAATC...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATAAGCTGTATGTAACCTaGAAGAGGGTCATCAACAGA | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYKLYVT*KRVINR Trigger: TCTGTTGATGACCCTCTTCCAGGTTACATACAGCTT...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000396679.6 ENST00000508421.5 |
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| CDS-3UTR TCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATTTTTCTGCCATTGACTaGGTTCAGCGGTTAAACATT | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYFSAID*VQRLNI Trigger: AATGTTTAACCGCTGAACTCAGTCAATGGCAGAAAA...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR TCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATCTTTTCCTAATGTTATaGGAACGTCTTCAGTCAAGG | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYLFLML*ERLQSR Trigger: CCTTGACTGAAGACGTTCTCATAACATTAGGAAAAG...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR GCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGATAGATGGCAGCACATaGCATTTTGCAATAAAAGTA | + |
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Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAIDGST*HFAIKV Trigger: TACTTTTATTGCAAAATGGCATGTGCTGCCATCTAT...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATCAGCTCAACATAAGGTaGCCAAAAGGAATCACTAAT | + |
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Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYQLNIR*PKGITN Trigger: ATTAGTGATTCCTTTTGGCCACCTTATGTTGAGCTG...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGGCAATAAAAGTAAGATaGCCTATGCGCATTAATTTG | + |
|
Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAAIKVR*PMRINL Trigger: CAAATTAATGCGCATAGGCCATCTTACTTTTATTGC...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGAAAATGAATAATAGATaGCAGCACATGCCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAKMNNR*QHMPFC Trigger: GCAAAATGGCATGTGCTGCCATCTATTATTCATTTT...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR TCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGGATCTAGATCCTCCTaGTTCATTGATATATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYGSRSS*FIDICF Trigger: AAAGCATATATCAATGAATCAGGAGGATCTAGATCC...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000514814.5 |
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| CDS-3UTR TCA 90 bp | TCCTTTAACTTTTCATTCTTTGACTCCTTAGTGGACAGTACCATTTCAAGATCTGGATCTAGATCCTCCTaGTTCATTGATATATGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SFNFSFFDSLVDSTISRSGSRSS*FIDICF Trigger: AAAGCATATATCAATGAATCAGGAGGATCTAGATCC...AGATCTTGAAATGGTACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000510768.5 |
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| CDS-3UTR CCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATCCTTATAAGAAAAACTaGAAGAGGGTCATCAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYPYKKN*KRVINR Trigger: TCTGTTGATGACCCTCTTCCAGTTTTTCTTATAAGG...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000514814.5 |
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| CDS-3UTR GCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATATAGATGGCAGCACATaGCATTTTGCAATAAAAGTA | + |
|
Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYIDGST*HFAIKV Trigger: TACTTTTATTGCAAAATGGCATGTGCTGCCATCTAT...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CCA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATAAAATGAATAATAGATaGCAGCACATGCCATTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYKMNNR*QHMPFC Trigger: GCAAAATGGCATGTGCTGCCATCTATTATTCATTTT...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS TCA 90 bp | CCACTTCCTTCTGTCCCCACCCTTCCATCTTTCTCTAAATATTGGTaGGGTTATGGAGCTTGCGTTGGCGCGCGGGAAGCCGAGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PLPSVPTLPSFSKYW*GYGACVGAREAEKN Trigger: GTTCTTCTCGGCTTCCCGCGCGCCAACGCAAGCTCCATAACCTCACCAATATTTAGAGAAAGATGGAAGGGTGGGGACAGAAGGAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508311.1 |
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| CDS-3UTR CAA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGCTGCGCAGGAAGCGCTaGCCAGCCCCGGACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: NNRWQHMPFCNKSKMAYALRRKR*PAPDFC Trigger: GCAGAAGTCCGGGGCTGGCAAGCGCTTCCTGCGCAG...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000396679.6 ENST00000514814.5 |
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| CDS-3UTR CAA 90 bp | CCTAATGTTATGAGAACGTCTTCAGTCAAGGGAATTGCAAGCATGGTGGCACACCTTCAGTCAAGGGAATaGCAAGCATGGTGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: PNVMRTSSVKGIASMVAHLQSRE*QAWWHT Trigger: TGTGTGCCACCATGCTTGCAATTCCCTTGACTGAAG...GTGTGCCACCATGCTTGCAATTCCCTTGACTGAAGACGTTCTCATAACATTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR CAA 90 bp | CCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTCTTCAGTCAAGGGAATaGCAAGCATGGTGGCACACA | + |
|
Preference number: 5 (lower is better) Translates to: PLSVAVHPTTVVPFLSLPLQSRE*QAWWHT Trigger: TGTGTGCCACCATGCTTGCAATTCCCTTGACTGAAG...AGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505960.5 ENST00000509397.5 |
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| CDS-3UTR CAA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGGATGGCACCCAGATCTaGAATCTCCAGCCTCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: NNRWQHMPFCNKSKMAYADGTQI*NLQPLD Trigger: GTCTAGAGGCTGGAGATTCAAGATCTGGGTGCCATC...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CAA 90 bp | TACCAAAATGTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGAGTGTGATGGCACCCAGATCTaGAATCTCCAGCCTCTAGAC | + |
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Preference number: 5 (lower is better) Translates to: YQNVTQARHKLNLLNIECDGTQI*NLQPLD Trigger: GTCTAGAGGCTGGAGATTCAAGATCTGGGTGCCATC...ACACTCTATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCACATTTTGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR CAA 90 bp | TCCCTTTCTAAGTCTTCCTTTAACTTTTCATTCTTTGACTCCTTAGTGGACAGTGATGGCACCCAGATCTaGAATCTCCAGCCTCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLSKSSFNFSFFDSLVDSDGTQI*NLQPLD Trigger: GTCTAGAGGCTGGAGATTCAAGATCTGGGTGCCATC...ACTGTCCACTAAGGAGTCAAAGAATGAAAAGTTAAAGGAAGACTTAGAAAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| CDS CCA 90 bp | ATGTCTCAAGGCAATTCCATTACGCAGCAGCAGCTCAACATAAGGTaGCCAAAAGGAATCACTAATTTTGACATATGGATCATGTGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: MSQGNSITQQQLNIR*PKGITNFDIWIMWN Trigger: GTTCCACATGATCCATATGTCAAAATTAGTGATTCCTTTTGGCCACCTTATGTTGAGCTGCTGCTGCGTAATGGAATTGCCTTGAGACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000510693.5 ENST00000514814.5 |
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| CDS-3UTR CAA 90 bp | GAGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTTACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: EIPLSVAVHPTTVVPFLSYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...ACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAATCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| CDS-3UTR CAA 90 bp | TTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTCCTTTATACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: LSVAVHPTTVVPFLSLPLYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...TAAAGGAAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000505960.5 ENST00000509397.5 ENST00000510768.5 |
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| CDS-3UTR CAA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGCTAATCTTATTCGGGTaGGATCTTCTGGATGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NNRWQHMPFCNKSKMAYALILFG*DLLDVS Trigger: TGAGACATCCAGAAGATCCAACCCGAATAAGATTAG...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CAA 90 bp | AATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATGCGTACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: NNRWQHMPFCNKSKMAYAYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...CGCATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CAA 90 bp | TACCAAAATGTGACACAGGCTCGCCACAAACTGAATTTGTTAAACATAGAGTGTCGCCACAAACTGAATTaGTTAAACATAGAGTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: YQNVTQARHKLNLLNIECRHKLN*LNIECL Trigger: CAGACACTCTATGTTTAACAAATTCAGTTTGTGGCG...ACACTCTATGTTTAACAAATTCAGTTTGTGGCGAGCCTGTGTCACATTTTGGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510354.1 |
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| CDS-3UTR CAA 90 bp | ATTCCATTATCTGTTGCTGTTCATCCAACCACCGTTGTTCCCTTTCTAAGTCTTATCTTGTCTCAGCTTTaGGAACTCCAAGTAGATTAT | + |
|
Preference number: 5 (lower is better) Translates to: IPLSVAVHPTTVVPFLSLILSQL*ELQVDY Trigger: ATAATCTACTTGGAGTTCCAAAAGCTGAGACAAGAT...AAGACTTAGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000510768.5 |
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| CDS-3UTR CAA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATCTAATCTTATTCGGGTaGGATCTTCTGGATGTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYLILFG*DLLDVS Trigger: TGAGACATCCAGAAGATCCAACCCGAATAAGATTAG...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS-3UTR CAA 90 bp | ATGAATAATAGATGGCAGCACATGCCATTTTGCAATAAAAGTAAGATGGCCTATTACCATTTCAAGATCTaGTCTCAGCTTTTGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: MNNRWQHMPFCNKSKMAYYHFKI*SQLLEL Trigger: GAGTTCCAAAAGCTGAGACAAGATCTTGAAATGGTA...ATAGGCCATCTTACTTTTATTGCAAAATGGCATGTGCTGCCATCTATTATTCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000514814.5 |
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| CDS CCA 72 bp | GCGGGAAGCCGAGAAGAACGGGACTCAAAGCCCGGCTaGGAAGTCAGGTATCATCACAGCGTCACAAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: AGSREERDSKPG*EVRYHHSVTNS Trigger: GGAGTTTGTGACGCTGTGATGATACCTGACTTCCCAGCCGGGCTTTGAGTCCCGTTCTTCTCGGCTTCCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508311.1 |
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| CDS CAA 90 bp | CCCTTCCATCTTTCTCTAAATATTGGTGAGGTTATGGAGCTTGCGTaGGCGCGCGGGAAGCCGAGAAGAACGGGACTCAAAGCCCGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PFHLSLNIGEVMELA*ARGKPRRTGLKARL Trigger: CAGCCGGGCTTTGAGTCCCGTTCTTCTCGGCTTCCCGCGCGCCAACGCAAGCTCCATAACCTCACCAATATTTAGAGAAAGATGGAAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508311.1 |
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| CDS TCA 72 bp | TCTGTCCCCACCCTTCCATCTTTCTCTAAATATTGGTaGGGTTATGGAGCTTGCGTTGGCGCGCGGGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SVPTLPSFSKYW*GYGACVGAREA Trigger: GGCTTCCCGCGCGCCAACGCAAGCTCCATAACCTCACCAATATTTAGAGAAAGATGGAAGGGTGGGGACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000508311.1 |
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| CDS CAA 72 bp | CTTTCTCTAAATATTGGTGAGGTTATGGAGCTTGCGTaGGCGCGCGGGAAGCCGAGAAGAACGGGACTCAAA | + |
|
Preference number: 6 (lower is better) Translates to: LSLNIGEVMELA*ARGKPRRTGLK Trigger: TTTGAGTCCCGTTCTTCTCGGCTTCCCGCGCGCCAACGCAAGCTCCATAACCTCACCAATATTTAGAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000508311.1 |
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| CDS CAA 90 bp | AGAAAACATCCTTTTACTGATGGAAAGCTTCTAATCTTATTCGGGTaGGATCTTCTGGATGTCTCAAGGCAATTCCATTACGCAGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RKHPFTDGKLLILFG*DLLDVSRQFHYAAA Trigger: TGCTGCTGCGTAATGGAATTGCCTTGAGACATCCAGAAGATCCAACCCGAATAAGATTAGAAGCTTTCCATCAGTAAAAGGATGTTTTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENST00000242872.7 ENST00000396679.6 ENST00000508421.5 ENST00000510693.5 ENST00000514814.5 |
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| CDS CAA 72 bp | AGATTCCATTATCTGTTGCTGTTCATCCAACCACCGTaGTTCCCTTTCGACATGGAAAAACAATACAAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: RFHYLLLFIQPP*FPFDMEKQYKQ Trigger: TTGCTTGTATTGTTTTTCCATGTCGAAAGGGAACAACGGTGGTTGGATGAACAGCAACAGATAATGGAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506282.6 |
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