Pregenerated sensors for CENPH (Homo sapiens)
Ensembl gene IDs: ENSG00000153044Ensembl transcript IDs: ENST00000283006.7, ENST00000502689.1, ENST00000510742.1, ENST00000513575.5, ENST00000514753.1, ENST00000515001.5
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCCACTGCCCTCCAGTCTaGGCAACAAAGCGAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: STSVGRGGGLPELRSSESHCPPV*ATKRDS Trigger: GGAGTCTCGCTTTGTTGCCCAGACTGGAGGGCAGTG...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| 3UTR-3UTR CAA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCCTGAGGCAGAACTGCTaGAACCCGGGAGGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: STSVGRGGGLPELRSSESLRQNC*NPGGRG Trigger: ACCTCTGCCTCCCGGGTTCAAGCAGTTCTGCCTCAG...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| 3UTR CCA 72 bp | TGGGCATGGCGGCGTGCACCTTTAGTCACAGCTACTTaGGAGGCTGAGGCAGAACTGCTTGAACCCGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: WAWRRAPLVTAT*EAEAELLEPGR Trigger: CCTCCCGGGTTCAAGCAGTTCTGCCTCAGCCTCCCAAGTAGCTGTGACTAAAGGTGCACGCCGCCATGCCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| 3UTR GCA 72 bp | GGATATGCTTTTCTAAAATTACGGTGGACAGACAAATaGACAGAAGTATTCCAAATAAGAGTTGAGATTGCC | + |
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Preference number: 3 (lower is better) Translates to: GYAFLKLRWTDK*TEVFQIRVEIA Trigger: GGCAATCTCAACTCTTATTTGGAATACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCTCCTCCATTGCTGGTTaGGGGGAAAGGCTACCACTC | + |
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Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESSSIAG*GERLPL Trigger: GAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGA...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCCTGCTCCTCCATTGCTaGTTGAGGGGAAAGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESLLLHC*LRGKAT Trigger: GGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAG...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCAAGGGCAGGATCCTCTaGCCAATTGACTTTACTCCC | + |
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Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESKGRIL*PIDFTP Trigger: GGGAGTAAAGTCAATTGGGCAGAGGATCCTGCCCTT...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCAAAATTAGCTGGGCATaGCGGCGTGCACCTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESKISWA*RRAPLV Trigger: GACTAAAGGTGCACGCCGCCATGCCCAGCTAATTTT...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCGATCTTTATCCTCTCTaGGTTTTCCATACTGTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESDLYPL*VFHTVQ Trigger: TTGGACAGTATGGAAAACTCAGAGAGGATAAAGATC...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCGTAGGTTTTGTCGTATaGTCTTTATCCTCTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESVGFVV*SLSSLS Trigger: ACTCAGAGAGGATAAAGATCATACGACAAAACCTAC...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCGTTTCATGTTATCCATaGGCACACTGTCTAATGCAA | + |
|
Preference number: 4 (lower is better) Translates to: STSVGRGGGLPELRSSESVSCYP*AHCLMQ Trigger: TTGCATTAGACAGTGTGCTCATGGATAACATGAAAC...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | TTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGCTATCATGCGGTCCTCGCTaGACGCCGCCTGGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FSSNRCFMLSMSTLDCLLSCGPR*TPPGRR Trigger: CCGGCGCCCAGGCGGCGTGCAGCGAGGACCGCATGA...TAGCAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR GCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTATCATGCGGTCCTCGCTaGACGCCGCCTGGGCGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVSCGPR*TPPGRR Trigger: CCGGCGCCCAGGCGGCGTGCAGCGAGGACCGCATGA...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | TTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGCTAGGCTCGTCGGCGTCTTaGATCTGGGGCTGCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: FSSNRCFMLSMSTLDCLLGSSAS*IWGCSS Trigger: GGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCC...TAGCAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR GCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTAGGCTCGTCGGCGTCTTaGATCTGGGGCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVGSSAS*IWGCSS Trigger: GGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCC...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTGGCTCGTCGGCGTCTTaGATCTGGGGCTGCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSGSSAS*IWGCSS Trigger: GGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCC...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTACCGAGATCGCGCCACTaGCCTCCAGTCTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVPRSRH*PPVWAT Trigger: TGTTGCCCAGACTGGAGGGCAGTGGCGCGATCTCGG...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTCCGAGATCGCGCCACTaGCCTCCAGTCTGGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSPRSRH*PPVWAT Trigger: TGTTGCCCAGACTGGAGGGCAGTGGCGCGATCTCGG...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTATCTGTGCTCTCAGCCTaGGGAGCAGGGTCATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVSVLSA*GAGSCG Trigger: ACCGCATGACCCTGCTCCTCAGGCTGAGAGCACAGA...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTTCTGTGCTCTCAGCCTaGGGAGCAGGGTCATGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSSVLSA*GAGSCG Trigger: ACCGCATGACCCTGCTCCTCAGGCTGAGAGCACAGA...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTCACTGCCCTCCAGTCTaGGCAACAAAGCGAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSHCPPV*ATKRDS Trigger: GGAGTCTCGCTTTGTTGCCCAGACTGGAGGGCAGTG...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | TTATTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGTCCTCCATTGCTGGTTaGGGGGAAAGGCTACCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LFSSNRCFMLSMSTLDCLSSIAG*GERLPL Trigger: GAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGA...CAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAATAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR TCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTTCCTCCATTGCTGGTTaGGGGGAAAGGCTACCACTC | + |
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Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSSSIAG*GERLPL Trigger: GAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGA...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTACTGCTCCTCCATTGCTaGTTGAGGGGAAAGGCTACC | + |
|
Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVLLLHC*LRGKAT Trigger: GGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAG...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | TTATTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGCTGCTCCTCCATTGCTaGTTGAGGGGAAAGGCTACC | + |
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Preference number: 4 (lower is better) Translates to: LFSSNRCFMLSMSTLDCLLLLHC*LRGKAT Trigger: GGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAG...CAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR GCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTAAAGGGCAGGATCCTCTaGCCAATTGACTTTACTCCC | + |
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Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVKGRIL*PIDFTP Trigger: GGGAGTAAAGTCAATTGGGCAGAGGATCCTGCCCTT...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTAAGGGCAGGATCCTCTaGCCAATTGACTTTACTCCC | + |
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Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSKGRIL*PIDFTP Trigger: GGGAGTAAAGTCAATTGGGCAGAGGATCCTGCCCTT...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTATTAGTCACAGCTACTTaGGAGGCTGAGGCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVLVTAT*EAEAEL Trigger: CAGTTCTGCCTCAGCCTCCCAAGTAGCTGTGACTAA...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTTTAGTCACAGCTACTTaGGAGGCTGAGGCAGAACTG | + |
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Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSLVTAT*EAEAEL Trigger: CAGTTCTGCCTCAGCCTCCCAAGTAGCTGTGACTAA...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTAAAAATTAGCTGGGCATaGCGGCGTGCACCTTTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVKISWA*RRAPLV Trigger: GACTAAAGGTGCACGCCGCCATGCCCAGCTAATTTT...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTGATCTTTATCCTCTCTaGGTTTTCCATACTGTCCAA | + |
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Preference number: 4 (lower is better) Translates to: TLWICFSKITVDRQMHRSDLYPL*VFHTVQ Trigger: TTGGACAGTATGGAAAACTCAGAGAGGATAAAGATC...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR TCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTAGTAGGTTTTGTCGTATaGTCTTTATCCTCTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVVGFVV*SLSSLS Trigger: ACTCAGAGAGGATAAAGATCATACGACAAAACCTAC...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR GCA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTACTCATCGCTTCGATTTaGTTTTCTTGCATAATTTGT | + |
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Preference number: 4 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVLIASI*FSCIIC Trigger: ACAAATTATGCAAGAAAAGCAAATCGAAGCGATGAG...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000502689.1 |
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| CDS GCA 90 bp | CTCGCTGCACGCCGCCTGGGCGCCGGCGACCTGCGGTGGCCCGCCTaGCCGGCCTTCCCCTCCGGAGTCCGCGGGCTCGTCGGCGTCTTG | + |
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Preference number: 5 (lower is better) Translates to: LAARRLGAGDLRWPA*PAFPSGVRGLVGVL Trigger: CAAGACGCCGACGAGCCCGCGGACTCCGGAGGGGAAGGCCGGGCAGGCGGGCCACCGCAGGTCGCCGGCGCCCAGGCGGCGTGCAGCGAG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000514753.1 ENST00000515001.5 |
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| CDS CCA 90 bp | CTCAGCCTGAGGAGCAGGGTCATGCGGTCCTCGCTGCACGCCGCCTaGGCGCCGGCGACCTGCGGTGGCCCGCCTGCCCGGCCTTCCCCT | + |
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Preference number: 5 (lower is better) Translates to: LSLRSRVMRSSLHAA*APATCGGPPARPSP Trigger: AGGGGAAGGCCGGGCAGGCGGGCCACCGCAGGTCGCCGGCGCCCAGGCGGCGTGCAGCGAGGACCGCATGACCCTGCTCCTCAGGCTGAG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000514753.1 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCGGGCTCGTCGGCGTCTaGCATCTGGGGCTGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: STSVGRGGGLPELRSSESGLVGV*HLGLLL Trigger: GAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCCC...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS GCA 90 bp | GTCCGCGGGCTCGTCGGCGTCTTGCATCTGGGGCTGCTCCTCCATTaGTGGTTGAGGGGAAAGGCTACCACTCAACAGGCAAACGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: VRGLVGVLHLGLLLH*WLRGKATTQQANAL Trigger: GAGCGCGTTTGCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCCCGCGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | AGCACTTCGGTAGGCCGAGGCGGTGGACTGCCTGAGCTCAGGAGTTCTGAGAGCGGGGCTGCTCCTCCATaGCTGGTTGAGGGGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: STSVGRGGGLPELRSSESGAAPP*LVEGKG Trigger: GCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCC...GCTCTCAGAACTCCTGAGCTCAGGCAGTCCACCGCCTCGGCCTACCGAAGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS CCA 90 bp | CGCGGGCTCGTCGGCGTCTTGCATCTGGGGCTGCTCCTCCATTGCTaGTTGAGGGGAAAGGCTACCACTCAACAGGCAAACGCGCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: RGLVGVLHLGLLLHC*LRGKATTQQANALR Trigger: TCTGAGCGCGTTTGCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCCCGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | TTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGCTAGGGCTCGTCGGCGTCTaGCATCTGGGGCTGCTCCTC | + |
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Preference number: 5 (lower is better) Translates to: FSSNRCFMLSMSTLDCLLGLVGV*HLGLLL Trigger: GAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCCC...TAGCAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR CAA 90 bp | TTATTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGGGGGCTGCTCCTCCATaGCTGGTTGAGGGGAAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LFSSNRCFMLSMSTLDCLGAAPP*LVEGKG Trigger: GCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCC...CAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAATAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR CAA 90 bp | TTTAGCTCTAATAGGTGTTTCATGTTATCCATGAGCACACTAGACTGTCTGCTACTCCTCCATTGCTGGTaGAGGGGAAAGGCTACCACT | + |
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Preference number: 5 (lower is better) Translates to: FSSNRCFMLSMSTLDCLLLLHCW*RGKATT Trigger: AGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAG...TAGCAGACAGTCTAGTGTGCTCATGGATAACATGAAACACCTATTAGAGCTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000513575.5 |
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| CDS-3UTR CAA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTCTCCTCCATTGCTGGTaGAGGGGAAAGGCTACCACT | + |
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Preference number: 5 (lower is better) Translates to: TLWICFSKITVDRQMHRSLLHCW*RGKATT Trigger: AGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAG...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTACTCCTCCATTGCTGGTaGAGGGGAAAGGCTACCACT | + |
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Preference number: 5 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVLLHCW*RGKATT Trigger: AGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAG...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTAGGATCCTCTGCCCAATaGACTTTACTCCCCAAAATA | + |
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Preference number: 5 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVGSSAQ*TLLPKI Trigger: TATTTTGGGGAGTAAAGTCAATTGGGCAGAGGATCC...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | ACGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTGGATCCTCTGCCCAATaGACTTTACTCCCCAAAATA | + |
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Preference number: 5 (lower is better) Translates to: TLWICFSKITVDRQMHRSGSSAQ*TLLPKI Trigger: TATTTTGGGGAGTAAAGTCAATTGGGCAGAGGATCC...ACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS GCA 90 bp | TCAGAAATGAATTCTTATTACATCATGTCAACATTCTTCTCAAGCTaGAGAACAATTTCCTTAAGGGCAGGATCCTCTGCCCAATTGACT | + |
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Preference number: 5 (lower is better) Translates to: SEMNSYYIMSTFFSS*RTISLRAGSSAQLT Trigger: AGTCAATTGGGCAGAGGATCCTGCCCTTAAGGAAATTGTTCTGCAGCTTGAGAAGAATGTTGACATGATGTAATAAGAATTCATTTCTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000502689.1 ENST00000515001.5 |
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| CDS-3UTR CAA 90 bp | CGTTATGGATATGCTTTTCTAAAATTACGGTGGACAGACAAATGCACAGAAGTATCTCATCGCTTCGATTaGCTTTTCTTGCATAATTTG | + |
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Preference number: 5 (lower is better) Translates to: RYGYAFLKLRWTDKCTEVSHRFD*LFLHNL Trigger: CAAATTATGCAAGAAAAGCAAATCGAAGCGATGAGA...TACTTCTGTGCATTTGTCTGTCCACCGTAATTTTAGAAAAGCATATCCATAACG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000502689.1 |
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| CDS CCA 72 bp | AGGAGCAGGGTCATGCGGTCCTCGCTGCACGCCGCCTaGGCGCCGGCGACCTGCGGTGGCCCGCCTGCCCGG | + |
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Preference number: 6 (lower is better) Translates to: RSRVMRSSLHAA*APATCGGPPAR Trigger: CCGGGCAGGCGGGCCACCGCAGGTCGCCGGCGCCCAGGCGGCGTGCAGCGAGGACCGCATGACCCTGCTCCT 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000514753.1 ENST00000515001.5 |
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| CDS CAA 72 bp | GCCTTCCCCTCCGGAGTCCGCGGGCTCGTCGGCGTCTaGCATCTGGGGCTGCTCCTCCATTGCTGGTTGAGG | + |
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Preference number: 6 (lower is better) Translates to: AFPSGVRGLVGV*HLGLLLHCWLR Trigger: CCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCCCGCGGACTCCGGAGGGGAAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000515001.5 |
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| CDS CAA 90 bp | AGTCCGCGGGCTCGTCGGCGTCTTGCATCTGGGGCTGCTCCTCCATaGCTGGTTGAGGGGAAAGGCTACCACTCAACAGGCAAACGCGCT | + |
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Preference number: 6 (lower is better) Translates to: SPRARRRLASGAAPP*LVEGKGYHSTGKRA Trigger: AGCGCGTTTGCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGCCCGCGGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000283006.7 ENST00000515001.5 |
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| CDS CAA 72 bp | GCTCGTCGGCGTCTTGCATCTGGGGCTGCTCCTCCATaGCTGGTTGAGGGGAAAGGCTACCACTCAACAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARRRLASGAAPP*LVEGKGYHSTG Trigger: GCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGACGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000515001.5 |
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| CDS TCA 72 bp | GCGTCTTGCATCTGGGGCTGCTCCTCCATTGCTGGTTaGGGGGAAAGGCTACCACTCAACAGGCAAACGCGC | + |
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Preference number: 6 (lower is better) Translates to: ASCIWGCSSIAG*GERLPLNRQTR Trigger: GCGCGTTTGCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000515001.5 |
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| CDS GCA 72 bp | CTCGTCGGCGTCTTGCATCTGGGGCTGCTCCTCCATTaGTGGTTGAGGGGAAAGGCTACCACTCAACAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LVGVLHLGLLLH*WLRGKATTQQA Trigger: TGCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGACGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000515001.5 |
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| CDS CCA 72 bp | GTCGGCGTCTTGCATCTGGGGCTGCTCCTCCATTGCTaGTTGAGGGGAAAGGCTACCACTCAACAGGCAAAC | + |
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Preference number: 6 (lower is better) Translates to: VGVLHLGLLLHC*LRGKATTQQAN Trigger: GTTTGCCTGTTGAGTGGTAGCCTTTCCCCTCAACCAGCAATGGAGGAGCAGCCCCAGATGCAAGACGCCGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000283006.7 ENST00000513575.5 ENST00000515001.5 |
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| CDS CCA 72 bp | TGTATGACAATAACAGCTGTCTACAGATGTTTCAAGTaGCATCATGTAATGAGGGCTTATTTTGGGTTGCCA | + |
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Preference number: 6 (lower is better) Translates to: CMTITAVYRCFK*HHVMRAYFGLP Trigger: TGGCAACCCAAAATAAGCCCTCATTACATGATGCCACTTGAAACATCTGTAGACAGCTGTTATTGTCATACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000510742.1 |
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