RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CENPE (Homo sapiens)

Ensembl gene IDs: ENSG00000138778

Ensembl transcript IDs: ENST00000265148.9, ENST00000380026.8, ENST00000509120.2, ENST00000514974.1, ENST00000611174.4

Found 478 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCCTCCAGGCTGGGAGTaGGGGGCAATGAAAAACAAA +
Preference number: 2 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLPPGWE*GAMKNK
Trigger: TTTGTTTTTCATTGCCCCTCACTCCCAGCCTGGAGG...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000380026.8
3UTR CAA 90 bp CCTGTTCCCTTATCTTTCAACTCTAGTGGCAAAGTAAAGACTGAATaGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACA +
Preference number: 2 (lower is better)
Translates to: PVPLSFNSSGKVKTE*KLSCTTTSLPGIDT
Trigger: TGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACTAGAGTTGAAAGATAAGGGAACAGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
3UTR-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCCAAATAAGGAATGCTaGATCTCCAGAGAAGTGACA +
Preference number: 2 (lower is better)
Translates to: EIKLHYNIITRDRHINKVPNKEC*ISREVT
Trigger: TGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
3UTR-3UTR TCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGGGAGTGAGGGGCAATaGAAAACAAAGTCTATAATA +
Preference number: 2 (lower is better)
Translates to: SIYALSICGDSRFRKLYFGSEGQ*KTKSII
Trigger: TATTATAGACTTTGTTTTTCATTGCCCCTCACTCCC...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000380026.8
3UTR-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGGCAAAGTAAAGACTaGATTGAAATTAAGCTGCAC +
Preference number: 2 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLWQSKD*IEIKLH
Trigger: GTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTGGTCCCAGGAAAATaGCCAGGACCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRLVPGK*PGPSAA
Trigger: GGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGAGGCACATCCTTGCCTaGGGAGGCGTGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRRHILA*GGVPRT
Trigger: GGTCCTTGGCACGCCTCCTCAGGCAAGGATGTGCCT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAGGCACATCCTTGCCTaGGGAGGCGTGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISRHILA*GGVPRT
Trigger: GGTCCTTGGCACGCCTCCTCAGGCAAGGATGTGCCT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTTGAGCCGCACACCTaGAGCGCCTGTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRLEPHT*SACLSS
Trigger: GCTGCTCAAACAGGCGCTGCAGGTGTGCGGCTCAAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACTGGTCCCAGGAAAATaGCCAGGACCCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKLVPGK*PGPSAA
Trigger: GGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACAGGCACATCCTTGCCTaGGGAGGCGTGCCAAGGACC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDRHILA*GGVPRT
Trigger: GGTCCTTGGCACGCCTCCTCAGGCAAGGATGTGCCT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGGCGTGCCAAGGACCTaGCTGAGAATCCACACTCTC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRGVPRT*LRIHTL
Trigger: GAGAGTGTGGATTCTCAGCCAGGTCCTTGGCACGCC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTATTACAGCCTTCCTTaGGCCGCACACCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISYYSLP*AAHLQR
Trigger: GCGCTGCAGGTGTGCGGCTCAAGGAAGGCTGTAATA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACTTGAGCCGCACACCTaGAGCGCCTGTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKLEPHT*SACLSS
Trigger: GCTGCTCAAACAGGCGCTGCAGGTGTGCGGCTCAAG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTACTCAGGCACATCCTTaGCTGAGGAGGCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLTQAHP*LRRRAK
Trigger: CTTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGT...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTATTACAGCCTTCCTTaGGCCGCACACCTGCAGCGC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDYYSLP*AAHLQR
Trigger: GCGCTGCAGGTGTGCGGCTCAAGGAAGGCTGTAATA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGGTCTCTCTCTACTTTaGGAGTCTCCTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRGLSLL*ESPPHS
Trigger: GGAGTGTGGAGGAGACTCTCAAAGTAGAGAGAGACC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTGCCAAGGACCTGGCTaGGAATCCACACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLCQGPG*ESTLSA
Trigger: AGCAGAGAGTGTGGATTCTCAGCCAGGTCCTTGGCA...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTCTTGAGCCGCACACCTaGAGCGCCTGTTTGAGCAGC +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFLEPHT*SACLSS
Trigger: GCTGCTCAAACAGGCGCTGCAGGTGTGCGGCTCAAG...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCACTCAGGCACATCCTTaGCTGAGGAGGCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVTQAHP*LRRRAK
Trigger: CTTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGGCGTGCCAAGGACCTaGCTGAGAATCCACACTCTC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVGVPRT*LRIHTL
Trigger: GAGAGTGTGGATTCTCAGCCAGGTCCTTGGCACGCC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGCGTGCCAAGGACCTaGCTGAGAATCCACACTCTC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKGVPRT*LRIHTL
Trigger: GAGAGTGTGGATTCTCAGCCAGGTCCTTGGCACGCC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGGTCTCTCTCTACTTTaGGAGTCTCCTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISGLSLL*ESPPHS
Trigger: GGAGTGTGGAGGAGACTCTCAAAGTAGAGAGAGACC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTTGCAGGCTTTCCTTaGGTTGGTCTCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRLAGFP*VGLSPV
Trigger: AACTGGAGAGAGACCAACTCAAGGAAAGCCTGCAAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCAAGTGATTCTTCTCTaGTGTTCAGCGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISQVILL*CSAAAL
Trigger: GAGTGCGGCCGCTGAACAGCAGAGAAGAATCACTTG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAACTCAGGCACATCCTTaGCTGAGGAGGCGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPTQAHP*LRRRAK
Trigger: CTTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGGTCTCTCTCTACTTTaGGAGTCTCCTCCACACTCC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVGLSLL*ESPPHS
Trigger: GGAGTGTGGAGGAGACTCTCAAAGTAGAGAGAGACC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGCCAAGGACCTGGCTaGGAATCCACACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLCQGPG*ESTLSA
Trigger: AGCAGAGAGTGTGGATTCTCAGCCAGGTCCTTGGCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATGCCAAGGACCTGGCTaGGAATCCACACTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPCQGPG*ESTLSA
Trigger: AGCAGAGAGTGTGGATTCTCAGCCAGGTCCTTGGCA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCCTCCAGGCTGGGAGTaGGGGGCAATGAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDPPGWE*GAMKNK
Trigger: TTTGTTTTTCATTGCCCCTCACTCCCAGCCTGGAGG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCAAGTGATTCTTCTCTaGTGTTCAGCGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVQVILL*CSAAAL
Trigger: GAGTGCGGCCGCTGAACAGCAGAGAAGAATCACTTG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCACACTCTCTGCTCCTaGATTTTGCACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISHTLCS*ILHLWT
Trigger: TGTCCAGAGGTGCAAAATGCAGGAGCAGAGAGTGTG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGAGTCTACTGAGTTTTaGACTCAGGCACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRESTEF*TQAHPC
Trigger: GCAAGGATGTGCCTGAGTGCAAAACTCAGTAGACTC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTGTGGTAGGATTAACCTaGGCACCAGATGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLVVGLT*APDAKE
Trigger: TTCCTTGGCATCTGGTGCCCAGGTTAATCCTACCAC...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCCTATCAGGCTGAACTaGTCCCAGGAAAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVPIRLN*SQENGQ
Trigger: CTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTGGTCACTTTCAGATTaGAGAACTTCTTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRWSLSD*RTSCSL
Trigger: GAGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATGGTCTCTCTCTATCTaGAGGGCCTCCTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKWSLSI*RASCTL
Trigger: AAGAGTACAGGAGGCCCTTCAGATAGAGAGAGACCA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGTCTCTCTCCAGTTTaGGTGTCTCCTCTACTCTTC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKGLSPV*VSPLLF
Trigger: GAAGAGTAGAGGAGACACTCAAACTGGAGAGAGACC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACTTGCAGGCTTTCCTTaGGTTGGTCTCTCTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKLAGFP*VGLSPV
Trigger: AACTGGAGAGAGACCAACTCAAGGAAAGCCTGCAAG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTGCCATCCTATCAGGCTaGACTGGTCCCAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLAILSG*TGPRKM
Trigger: CATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGC...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGCCATCCTATCAGGCTaGACTGGTCCCAGGAAAATG +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPAILSG*TGPRKM
Trigger: CATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACAAGTGATTCTTCTCTaGTGTTCAGCGGCCGCACTC +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPQVILL*CSAAAL
Trigger: GAGTGCGGCCGCTGAACAGCAGAGAAGAATCACTTG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGAGGCTTTCCGTAAGGTaGTGTTGTCCATCACTTAGT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRRLSVR*CCPSLS
Trigger: ACTAAGTGATGGACAACAGCACCTTACGGAAAGCCT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTGTACAATGCCGCTaGCACCTCCACAAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFVQCR*HLHKLR
Trigger: CCTTAACTTGTGGAGGTGGCAGCGGCATTGTACAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTGTGTTTTGTACAATaGCGCTGCCACCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISLCFVQ*RCHLHK
Trigger: CTTGTGGAGGTGGCAGCGGCATTGTACAAAACACAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCACACTCTCTGCTCCTaGATTTTGCACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLHTLCS*ILHLWT
Trigger: TGTCCAGAGGTGCAAAATGCAGGAGCAGAGAGTGTG...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGTGGTAGGATTAACCTaGGCACCAGATGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKVVGLT*APDAKE
Trigger: TTCCTTGGCATCTGGTGCCCAGGTTAATCCTACCAC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGTGGTAGGATTAACCTaGGCACCAGATGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDVVGLT*APDAKE
Trigger: TTCCTTGGCATCTGGTGCCCAGGTTAATCCTACCAC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCCTATCAGGCTGAACTaGTCCCAGGAAAATGGCCAG +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFPIRLN*SQENGQ
Trigger: CTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGGCAGTTTCTCCAAGTaGTTCTTCTCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDGSFSK*FFSAVQ
Trigger: CTGAACAGCAGAGAAGAATCACTTGGAGAAACTGCC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGGTATAACTCCCAAATaGTCTTCTGAACCCATCATG +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRGITPK*SSEPIM
Trigger: CATGATGGGTTCAGAAGATCATTTGGGAGTTATACC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCTTTTTCCATTGCCTaGGCCCGCGTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSFSIA*ARVSKE
Trigger: TTCTTTAGAGACGCGGGCTCAGGCAATGGAAAAAGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGGTCTCTCTCTATCTaGAGGGCCTCCTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLWSLSI*RASCTL
Trigger: AAGAGTACAGGAGGCCCTTCAGATAGAGAGAGACCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATGGTCTCTCTCTATCTaGAGGGCCTCCTGTACTCTT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPWSLSI*RASCTL
Trigger: AAGAGTACAGGAGGCCCTTCAGATAGAGAGAGACCA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGGTCTCTCTCCAGTTTaGGTGTCTCCTCTACTCTTC +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFGLSPV*VSPLLF
Trigger: GAAGAGTAGAGGAGACACTCAAACTGGAGAGAGACC...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCCCTTAAGGTTGCTATaGATTGGTCCCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRPLRLL*IGPFPF
Trigger: AAATGGAAAGGGACCAATTCATAGCAACCTTAAGGG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCAAAGAGGAGTCTACTaGGTTTTGCACTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDQRGVY*VLHSGT
Trigger: TGTGCCTGAGTGCAAAACTCAGTAGACTCCTCTTTG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGAGCAGCTCTTTCACTaGCTGCAAGATCAACCAAAT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISEQLFH*LQDQPN
Trigger: ATTTGGTTGATCTTGCAGGCAGTGAAAGAGCTGCTC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTGGTCCCTCTCAATTTaGAAGCTTTCTTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRWSLSI*KLSWSC
Trigger: ACAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTTTTCTTCAACTTCTaGCAGTCTGTCACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRFFFNF*QSVTGP
Trigger: AGGACCTGTGACAGACTGGCAGAAGTTGAAGAAAAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTCCTTGGCTTTGCGATaGTCCTTGAATTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRSLALR*SLNCFS
Trigger: ACTGAAACAATTCAAGGAGCATCGCAAAGCCAAGGA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAGGCTTTCCGTAAGGTaGTGTTGTCCATCACTTAGT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISRLSVR*CCPSLS
Trigger: ACTAAGTGATGGACAACAGCACCTTACGGAAAGCCT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTTGTACAATGCCGCTaGCACCTCCACAAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFVQCR*HLHKLR
Trigger: CCTTAACTTGTGGAGGTGGCAGCGGCATTGTACAAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACACACTCTCTGCTCCTaGATTTTGCACCTCTGGACA +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPHTLCS*ILHLWT
Trigger: TGTCCAGAGGTGCAAAATGCAGGAGCAGAGAGTGTG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGAGTCTACTGAGTTTTaGACTCAGGCACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVESTEF*TQAHPC
Trigger: GCAAGGATGTGCCTGAGTGCAAAACTCAGTAGACTC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGCAGTACTGGCAAACTaGAGAGCAGTAAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISAVLAN*RAVSVS
Trigger: TGAAACACTTACTGCTCTCCAGTTTGCCAGTACTGC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAGGCTGATTCTCTCTTaGCATCAAGGGCTACAGTTT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISRLILS*HQGLQF
Trigger: AAACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGTGTTGTTGAGTCCTTaGTTGTGGACTGTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRVLLSP*LWTVLL
Trigger: TAACAGAACAGTCCACAACCAAGGACTCAACAACAC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGCAGTTTCTCCAAGTaGTTCTTCTCTGCTGTTCAG +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPGSFSK*FFSAVQ
Trigger: CTGAACAGCAGAGAAGAATCACTTGGAGAAACTGCC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGTATGGCAGAATCGATaGTTGGTGCTGCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISVWQNR*LVLLFL
Trigger: AAGAAATAGCAGCACCAATCATCGATTCTGCCATAC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGGTATAACTCCCAAATaGTCTTCTGAACCCATCATG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISGITPK*SSEPIM
Trigger: CATGATGGGTTCAGAAGATCATTTGGGAGTTATACC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTCTTTTTCCATTGCCTaGGCCCGCGTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLSFSIA*ARVSKE
Trigger: TTCTTTAGAGACGCGGGCTCAGGCAATGGAAAAAGA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATCTTTTTCCATTGCCTaGGCCCGCGTCTCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPSFSIA*ARVSKE
Trigger: TTCTTTAGAGACGCGGGCTCAGGCAATGGAAAAAGA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGATTCTGAAAGCAAAATaGCTTCTTCCCGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRILKAK*LLPAKL
Trigger: AAGCTTTGCGGGAAGAAGTCATTTTGCTTTCAGAAT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTGTTCTTGTTTGCTTTaGGACTCCTGGATTTTAGCC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISCSCLL*DSWILA
Trigger: GGCTAAAATCCAGGAGTCTCAAAGCAAACAAGAACA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATGGTCACTTTCAGATTaGAGAACTTCTTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKWSLSD*RTSCSL
Trigger: GAGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACAAAGAGGAGTCTACTaGGTTTTGCACTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPQRGVY*VLHSGT
Trigger: TGTGCCTGAGTGCAAAACTCAGTAGACTCCTCTTTG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTCAAAGAGGAGTCTACTaGGTTTTGCACTCAGGCACA +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLQRGVY*VLHSGT
Trigger: TGTGCCTGAGTGCAAAACTCAGTAGACTCCTCTTTG...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGAGCAGCTCTTTCACTaGCTGCAAGATCAACCAAAT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVEQLFH*LQDQPN
Trigger: ATTTGGTTGATCTTGCAGGCAGTGAAAGAGCTGCTC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGCATCAAACAGAGTCTaGTTCATTTGTTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRASNRV*FICFGS
Trigger: AGACCCAAAACAAATGAAGCAGACTCTGTTTGATGC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTGGTCCCTCTCAATTTaGAAGCTTTCTTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISWSLSI*KLSWSC
Trigger: ACAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTCTTTGGGTTTGAATTaGTCCATCTCACTCACGATT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRSLGLN*SISLTI
Trigger: AATCGTGAGTGAGATGGAGCAATTCAAACCCAAAGA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCCTTGGCTTTGCGATaGTCCTTGAATTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSLALR*SLNCFS
Trigger: ACTGAAACAATTCAAGGAGCATCGCAAAGCCAAGGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTAGCTTTGGTTTCTTaGAGGCTTTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLALVS*RLSLSW
Trigger: CCAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTTTGTACAATGCCGCTaGCACCTCCACAAGTTAAGG +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFFVQCR*HLHKLR
Trigger: CCTTAACTTGTGGAGGTGGCAGCGGCATTGTACAAA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTTGTGTTTTGTACAATaGCGCTGCCACCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLLCFVQ*RCHLHK
Trigger: CTTGTGGAGGTGGCAGCGGCATTGTACAAAACACAA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTGAGTCTACTGAGTTTTaGACTCAGGCACATCCTTGC +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLESTEF*TQAHPC
Trigger: GCAAGGATGTGCCTGAGTGCAAAACTCAGTAGACTC...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGGCAGAATCGATGATTaGTGCTGCTATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRGRIDD*CCYFFI
Trigger: TATGAAGAAATAGCAGCACCAATCATCGATTCTGCC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCCTCCCAAGGAATTCTaGAGAATTCGTGTTAACTTG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISPPKEF*RIRVNL
Trigger: CAAGTTAACACGAATTCTCCAGAATTCCTTGGGAGG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGCAGTACTGGCAAACTaGAGAGCAGTAAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDAVLAN*RAVSVS
Trigger: TGAAACACTTACTGCTCTCCAGTTTGCCAGTACTGC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAGGCTGATTCTCTCTTaGCATCAAGGGCTACAGTTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKRLILS*HQGLQF
Trigger: AAACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGTGTTGTTGAGTCCTTaGTTGTGGACTGTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISVLLSP*LWTVLL
Trigger: TAACAGAACAGTCCACAACCAAGGACTCAACAACAC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCCAGGTTTAACTTCTaGGTCTCAAATTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSRFNF*VSNCSF
Trigger: GAAGGAGCAATTTGAGACCCAGAAGTTAAACCTGGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGTATAACTCCCAAATaGTCTTCTGAACCCATCATG +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKGITPK*SSEPIM
Trigger: CATGATGGGTTCAGAAGATCATTTGGGAGTTATACC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGAAAACATCAGACTCTaGACAGACAGATTCATCAAT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRENIRL*TDRFIN
Trigger: ATTGATGAATCTGTCTGTTCAGAGTCTGATGTTTTC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCACTTCTAAGAAAGGCTaGTTCTCTCTTGGCATCAAG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVTSKKG*FSLGIK
Trigger: CTTGATGCCAAGAGAGAATCAGCCTTTCTTAGAAGT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTATTCTGAAAGCAAAATaGCTTCTTCCCGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLILKAK*LLPAKL
Trigger: AAGCTTTGCGGGAAGAAGTCATTTTGCTTTCAGAAT...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCATTTAGTCTTTCTTaGACCTCACGTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSFSLS*TSRVFS
Trigger: GGAGAAAACACGTGAGGTTCAAGAAAGACTAAATGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTTCATTAAGTTTCTaGGCCAACTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFSLSF*ANSSLS
Trigger: AGAGAGGCTTGAGTTGGCTCAGAAACTTAATGAAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTGTTCTTGTTTGCTTTaGGACTCCTGGATTTTAGCC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDCSCLL*DSWILA
Trigger: GGCTAAAATCCAGGAGTCTCAAAGCAAACAAGAACA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTGGTCACTTTCAGATTaGAGAACTTCTTGCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFWSLSD*RTSCSL
Trigger: GAGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCTTTCAGGCAACAATaGGCAACTTTAAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSFRQQ*ATLSSS
Trigger: AGAGGAACTTAAAGTTGCTCATTGTTGCCTGAAAGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTGCTTTTGAATGGTTaGTATTTCAGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRLLLNG*YFSFLL
Trigger: GAGAAGGAAACTGAAATATCAACCATTCAAAAGCAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACCCTTAAGGTTGCTATaGATTGGTCCCTTTCCATTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKPLRLL*IGPFPF
Trigger: AAATGGAAAGGGACCAATTCATAGCAACCTTAAGGG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCATGATCATCCATCTCTaGGTATCTCTTCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISMIIHL*VSLQKL
Trigger: GAGCTTTTGAAGAGATACTCAGAGATGGATGATCAT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGAGGGAACTCACTTTCTaGGAAATCTTTGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRRELTF*EIFENF
Trigger: GAAATTCTCAAAGATTTCTCAGAAAGTGAGTTCCCT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTAGCTTCATGCAGTaGATTTTCCAGCTCTCGAAT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFSFMQ*IFQLSN
Trigger: ATTCGAGAGCTGGAAAATTCACTGCATGAAGCTAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGTATCTTGGGCCTGTTaGCTTCTTCTGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVVSWAC*LLLRFS
Trigger: AGAAAATCTCAGAAGAAGTCAACAGGCCCAAGATAC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGGTATCTTGGGCCTGTTaGCTTCTTCTGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLVSWAC*LLLRFS
Trigger: AGAAAATCTCAGAAGAAGTCAACAGGCCCAAGATAC...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGGTTTATTTGAAGGCTaGGGATCAGTATGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISGLFEG*GSVCSD
Trigger: ATCAGAACATACTGATCCTCAGCCTTCAAATAAACC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCAAGTTACTTGTTTGTaGGCCTCTCTTTTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISQVTCL*ASLLRV
Trigger: AACCCTTAAAAGAGAGGCTCACAAACAAGTAACTTG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTCCGTTCCTTGCATTaGGAGGGTGTAATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFRSLH*EGVICF
Trigger: GAAACAAATTACACCCTCTCAATGCAAGGAACGGAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTCCGTTCCTTGCATTaGGAGGGTGTAATTTGTTTC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKFRSLH*EGVICF
Trigger: GAAACAAATTACACCCTCTCAATGCAAGGAACGGAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAGCTCTTTCACTGCCTaGAAGATCAACCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSSFTA*KINQIQ
Trigger: TTGAATTTGGTTGATCTTGCAGGCAGTGAAAGAGCT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGAGCAGCTCTTTCACTaGCTGCAAGATCAACCAAAT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPEQLFH*LQDQPN
Trigger: ATTTGGTTGATCTTGCAGGCAGTGAAAGAGCTGCTC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGCATCAAACAGAGTCTaGTTCATTTGTTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISASNRV*FICFGS
Trigger: AGACCCAAAACAAATGAAGCAGACTCTGTTTGATGC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTCCCTTTCTACAGTTTaGAGCGTAGAATCTCTATTT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRSLSTV*SVESLF
Trigger: AAATAGAGATTCTACGCTGCAAACTGTAGAAAGGGA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTGGTCCCTCTCAATTTaGAAGCTTTCTTGGAGTTGT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVWSLSI*KLSWSC
Trigger: ACAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTTTTTCTTCAACTTCTaGCAGTCTGTCACAGGTCCT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVFFFNF*QSVTGP
Trigger: AGGACCTGTGACAGACTGGCAGAAGTTGAAGAAAAA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTGTTTTTCTTGGAGTTaGTGGCTCTTTTCCTTTAGT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRCFSWS*WLFSFS
Trigger: ACTAAAGGAAAAGAGCCAGCAACTCCAAGAAAAACA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTAGGACTGTTCTTGTTTaGTTTGAGACTCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLRTVLV*FETPGF
Trigger: AAATCCAGGAGTCTCAAAGCAAACAAGAACAGTCCT...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATCCTTGGCTTTGCGATaGTCCTTGAATTGTTTCAGT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKSLALR*SLNCFS
Trigger: ACTGAAACAATTCAAGGAGCATCGCAAAGCCAAGGA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTCTGGGTCTCAAATTaGTCCTTCAAGTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRFWVSN*SFKCSI
Trigger: AATAGAACACTTGAAGGAGCAATTTGAGACCCAGAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACTAGCTTTGGTTTCTTaGAGGCTTTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPLALVS*RLSLSW
Trigger: CCAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTCTAGCTTTGGTTTCTTaGAGGCTTTCCTTGAGTTGG +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLLALVS*RLSLSW
Trigger: CCAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAG...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAAGGCTTTCCGTAAGGTaGTGTTGTCCATCACTTAGT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPRLSVR*CCPSLS
Trigger: ACTAAGTGATGGACAACAGCACCTTACGGAAAGCCT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGGCAGAATCGATGATTaGTGCTGCTATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISGRIDD*CCYFFI
Trigger: TATGAAGAAATAGCAGCACCAATCATCGATTCTGCC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTTCTGAACCCATCATaGTATATGTTTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRLLNPS*YMFFLK
Trigger: CTTCAGGAAAAACATATACCATGATGGGTTCAGAAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCCTCCCAAGGAATTCTaGAGAATTCGTGTTAACTTG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVPPKEF*RIRVNL
Trigger: CAAGTTAACACGAATTCTCCAGAATTCCTTGGGAGG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTGCAGTACTGGCAAACTaGAGAGCAGTAAGTGTTTCA +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLAVLAN*RAVSVS
Trigger: TGAAACACTTACTGCTCTCCAGTTTGCCAGTACTGC...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTGAGTCCTTGGTTGTaGACTGTTCTGTTAATAACT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRLSPWL*TVLLIT
Trigger: AGTTATTAACAGAACAGTCCACAACCAAGGACTCAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTCTTGAAGTCTGTTaGTCAACTCGAGCATCTTAC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFLEVC*STRASY
Trigger: GTAAGATGCTCGAGTTGACCAACAGACTTCAAGAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGTCCAGGTTTAACTTCTaGGTCTCAAATTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLSRFNF*VSNCSF
Trigger: GAAGGAGCAATTTGAGACCCAGAAGTTAAACCTGGA...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCCAGGTTTAACTTCTaGGTCTCAAATTGCTCCTTC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSRFNF*VSNCSF
Trigger: GAAGGAGCAATTTGAGACCCAGAAGTTAAACCTGGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAGGTTTTCCTTGAGCTaGTCTCTCTCTACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVRFSLS*SLSTLR
Trigger: TCTCAAAGTAGAGAGAGACCAGCTCAAGGAAAACCT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAGGTTTTCCTTGAGCTaGTCTCTCTCTACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKRFSLS*SLSTLR
Trigger: TCTCAAAGTAGAGAGAGACCAGCTCAAGGAAAACCT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCCAAATAAGGAATGCTaGATCTCCAGAGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLPNKEC*ISREVT
Trigger: TGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGG...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTTTTCAGGTTTTACTTaGTGGTTCTGTCGGTCCTGC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFFSGFT*WFCRSC
Trigger: GCAGGACCGACAGAACCACCAAGTAAAACCTGAAAA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCGTATGGCAGAATCGATaGTTGGTGCTGCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFVWQNR*LVLLFL
Trigger: AAGAAATAGCAGCACCAATCATCGATTCTGCCATAC...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGTATGGCAGAATCGATaGTTGGTGCTGCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPVWQNR*LVLLFL
Trigger: AAGAAATAGCAGCACCAATCATCGATTCTGCCATAC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATCCCAAATGATCTTCTaGACCCATCATGGTATATGT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKSQMIF*THHGIC
Trigger: ACATATACCATGATGGGTTCAGAAGATCATTTGGGA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCATACAACTTCTTCTGTaGGATCAGCAACATACACAT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISIQLLL*DQQHTH
Trigger: ATGTGTATGTTGCTGATCTCACAGAAGAAGTTGTAT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGAGAGCTTCATCAGTTaGTACCTCATTAACATAAGG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVESFIS*YLINIR
Trigger: CCTTATGTTAATGAGGTATCAACTGATGAAGCTCTC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGGAGAGCTTCATCAGTTaGTACCTCATTAACATAAGG +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLESFIS*YLINIR
Trigger: CCTTATGTTAATGAGGTATCAACTGATGAAGCTCTC...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACATAGTCAGCACGAAGTaGGTTCAACTCACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDIVSTK*VQLTFY
Trigger: ATAGAAAGTGAGTTGAACTCACTTCGTGCTGACTAT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAATAGTCAGCACGAAGTaGGTTCAACTCACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKIVSTK*VQLTFY
Trigger: ATAGAAAGTGAGTTGAACTCACTTCGTGCTGACTAT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTACTTCTAAGAAAGGCTaGTTCTCTCTTGGCATCAAG +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLTSKKG*FSLGIK
Trigger: CTTGATGCCAAGAGAGAATCAGCCTTTCTTAGAAGT...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCACTTCTAAGAAAGGCTaGTTCTCTCTTGGCATCAAG +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFTSKKG*FSLGIK
Trigger: CTTGATGCCAAGAGAGAATCAGCCTTTCTTAGAAGT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTGCTCAAAGTCCATATaGAGGGTTTTGAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISCSKSI*RVLKFW
Trigger: CCAAAATTTCAAAACCCTTCATATGGACTTTGAGCA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTCATTTAGTCTTTCTTaGACCTCACGTGTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSFSLS*TSRVFS
Trigger: GGAGAAAACACGTGAGGTTCAAGAAAGACTAAATGA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTTTCATTAAGTTTCTaGGCCAACTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKFSLSF*ANSSLS
Trigger: AGAGAGGCTTGAGTTGGCTCAGAAACTTAATGAAAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCTTTCAGGCAACAATaGGCAACTTTAAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSFRQQ*ATLSSS
Trigger: AGAGGAACTTAAAGTTGCTCATTGTTGCCTGAAAGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTCTGCTTTTGAATGGTTaGTATTTCAGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLLLLNG*YFSFLL
Trigger: GAGAAGGAAACTGAAATATCAACCATTCAAAAGCAG...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTTTGCGATGCTCCTTaGATTGTTTCAGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLCDAP*IVSVHS
Trigger: TGAATGAACTGAAACAATTCAAGGAGCATCGCAAAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACATGATCATCCATCTCTaGGTATCTCTTCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDMIIHL*VSLQKL
Trigger: GAGCTTTTGAAGAGATACTCAGAGATGGATGATCAT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCACTTCAGTTTCTTCATaGTTCTGTGGAATTCCATGG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVTSVSS*FCGIPW
Trigger: CCATGGAATTCCACAGAATCATGAAGAAACTGAAGT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGCTCTTGATGTAACATaGGGATTCTTATTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISALDVT*GFLLSC
Trigger: ACAAGACAATAAGAATCCTCATGTTACATCAAGAGC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTTAGCTTCATGCAGTaGATTTTCCAGCTCTCGAAT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKFSFMQ*IFQLSN
Trigger: ATTCGAGAGCTGGAAAATTCACTGCATGAAGCTAAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGTATCTTGGGCCTGTTaGCTTCTTCTGAGATTTTCT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPVSWAC*LLLRFS
Trigger: AGAAAATCTCAGAAGAAGTCAACAGGCCCAAGATAC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGGTTTATTTGAAGGCTaGGGATCAGTATGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVGLFEG*GSVCSD
Trigger: ATCAGAACATACTGATCCTCAGCCTTCAAATAAACC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGTTTATTTGAAGGCTaGGGATCAGTATGTTCTGAT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKGLFEG*GSVCSD
Trigger: ATCAGAACATACTGATCCTCAGCCTTCAAATAAACC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTTCCTTCCAAGTTTTaGCCTCATTGGAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFPSKF*PHWKDA
Trigger: AGCATCTTTCCAATGAGGTCAAAACTTGGAAGGAAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTTCCTTCCAAGTTTTaGCCTCATTGGAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKFPSKF*PHWKDA
Trigger: AGCATCTTTCCAATGAGGTCAAAACTTGGAAGGAAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCAAGTTACTTGTTTGTaGGCCTCTCTTTTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDQVTCL*ASLLRV
Trigger: AACCCTTAAAAGAGAGGCTCACAAACAAGTAACTTG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACAAGTTACTTGTTTGTaGGCCTCTCTTTTAAGGGTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKQVTCL*ASLLRV
Trigger: AACCCTTAAAAGAGAGGCTCACAAACAAGTAACTTG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTGGCAAAGTAAAGACTaGATTGAAATTAAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISWQSKD*IEIKLH
Trigger: GTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACAGGTTACCAGAAATGTaGGAAAGAACTTCTGTGGTT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDRLPEM*ERTSVV
Trigger: AACCACAGAAGTTCTTTCTCACATTTCTGGTAACCT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGGAGTGAGGGGCAATaGAAAACAAAGTCTATAATA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKGSEGQ*KTKSII
Trigger: TATTATAGACTTTGTTTTTCATTGCCCCTCACTCCC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGAAAATGTCATGAATTaGCCTGGGTATAACTCCCAA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKENVMN*PGYNSQ
Trigger: TTGGGAGTTATACCCAGGGCAATTCATGACATTTTC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGAAAATGTCATGAATTaGCCTGGGTATAACTCCCAA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVENVMN*PGYNSQ
Trigger: TTGGGAGTTATACCCAGGGCAATTCATGACATTTTC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGAAAATGTCATGAATTaGCCTGGGTATAACTCCCAA +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDENVMN*PGYNSQ
Trigger: TTGGGAGTTATACCCAGGGCAATTCATGACATTTTC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAGCTCTTTCACTGCCTaGAAGATCAACCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSSFTA*KINQIQ
Trigger: TTGAATTTGGTTGATCTTGCAGGCAGTGAAAGAGCT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGATAATACGTGTCTTTaGATTTCCTCCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISDNTCL*ISSQGI
Trigger: AATTCCTTGGGAGGAAATGCAAAGACACGTATTATC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGGAATTCTTGATCAGTaGTTTTATAATTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRGILDQ*FYNSTV
Trigger: CACAGTCGAATTATAAAAGCACTGATCAAGAATTCC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGACTTCTTCTAAAGTTTaGTGCAGTTTCTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRTSSKV*CSFSVI
Trigger: GATTACTGAGAAACTGCAGCAAACTTTAGAAGAAGT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAGGACTGTTCTTGTTTaGTTTGAGACTCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVRTVLV*FETPGF
Trigger: AAATCCAGGAGTCTCAAAGCAAACAAGAACAGTCCT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTCTTTGGGTTTGAATTaGTCCATCTCACTCACGATT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSLGLN*SISLTI
Trigger: AATCGTGAGTGAGATGGAGCAATTCAAACCCAAAGA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTCTGGGTCTCAAATTaGTCCTTCAAGTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFWVSN*SFKCSI
Trigger: AATAGAACACTTGAAGGAGCAATTTGAGACCCAGAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGATCTTGCTTTCCTTATaGATAGCACTTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRILLSL*IALSLA
Trigger: AGCTAAAGAAAGTGCTATGCATAAGGAAAGCAAGAT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTGGTTCTGTCGGTCCTaGTTTTTCTGTAATTCATCT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVWFCRS*FFCNSS
Trigger: AGATGAATTACAGAAAAAGCAGGACCGACAGAACCA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGGCAGAATCGATGATTaGTGCTGCTATTTCTTCATA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVGRIDD*CCYFFI
Trigger: TATGAAGAAATAGCAGCACCAATCATCGATTCTGCC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTCCTCCCAAGGAATTCTaGAGAATTCGTGTTAACTTG +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLPPKEF*RIRVNL
Trigger: CAAGTTAACACGAATTCTCCAGAATTCCTTGGGAGG...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCTGCTTCATTTGTTTTaGGTCTTCAATGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISLLHLF*VFNAFQ
Trigger: TTGGAAAGCATTGAAGACCCAAAACAAATGAAGCAG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTGAGTCCTTGGTTGTaGACTGTTCTGTTAATAACT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISLSPWL*TVLLIT
Trigger: AGTTATTAACAGAACAGTCCACAACCAAGGACTCAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCGTGTTGTTGAGTCCTTaGTTGTGGACTGTTCTGTTA +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFVLLSP*LWTVLL
Trigger: TAACAGAACAGTCCACAACCAAGGACTCAACAACAC...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGATATGTTCTTTCAGCTaGTCATGTTTAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: TKSFPNKECWISREVTKRICSFS*SCLTSR
Trigger: CCTTGAAGTTAAACATGACCAGCTGAAAGAACATAT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTTCTTGAAGTCTGTTaGTCAACTCGAGCATCTTAC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFLEVC*STRASY
Trigger: GTAAGATGCTCGAGTTGACCAACAGACTTCAAGAAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTAGGTTTTCCTTGAGCTaGTCTCTCTCTACTTTGAGA +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFRFSLS*SLSTLR
Trigger: TCTCAAAGTAGAGAGAGACCAGCTCAAGGAAAACCT...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTTTCAGGTTTTACTTaGTGGTTCTGTCGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKFSGFT*WFCRSL
Trigger: TAGAGACCGACAGAACCACCAAGTAAAACCTGAAAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCCAAATAAGGAATGCTaGATCTCCAGAGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFPNKEC*ISREVT
Trigger: TGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTTCCCAAATGATCTTCTaGACCCATCATGGTATATGT +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFSQMIF*THHGIC
Trigger: ACATATACCATGATGGGTTCAGAAGATCATTTGGGA...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGAGAGCTTCATCAGTTaGTACCTCATTAACATAAGG +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPESFIS*YLINIR
Trigger: CCTTATGTTAATGAGGTATCAACTGATGAAGCTCTC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGAAAACATCAGACTCTaGACAGACAGATTCATCAAT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVENIRL*TDRFIN
Trigger: ATTGATGAATCTGTCTGTTCAGAGTCTGATGTTTTC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGAAAACATCAGACTCTaGACAGACAGATTCATCAAT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKENIRL*TDRFIN
Trigger: ATTGATGAATCTGTCTGTTCAGAGTCTGATGTTTTC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCATAGTCAGCACGAAGTaGGTTCAACTCACTTTCTAT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFIVSTK*VQLTFY
Trigger: ATAGAAAGTGAGTTGAACTCACTTCGTGCTGACTAT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCATTCTGAAAGCAAAATaGCTTCTTCCCGCAAAGCTT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFILKAK*LLPAKL
Trigger: AAGCTTTGCGGGAAGAAGTCATTTTGCTTTCAGAAT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATTTTCATTAAGTTTCTaGGCCAACTCAAGCCTCTCT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPFSLSF*ANSSLS
Trigger: AGAGAGGCTTGAGTTGGCTCAGAAACTTAATGAAAA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTCTTTCAGGCAACAATaGGCAACTTTAAGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFSFRQQ*ATLSSS
Trigger: AGAGGAACTTAAAGTTGCTCATTGTTGCCTGAAAGA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACTGCTTTTGAATGGTTaGTATTTCAGTTTCCTTCTC +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKLLLNG*YFSFLL
Trigger: GAGAAGGAAACTGAAATATCAACCATTCAAAAGCAG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACTTTGCGATGCTCCTTaGATTGTTTCAGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPLCDAP*IVSVHS
Trigger: TGAATGAACTGAAACAATTCAAGGAGCATCGCAAAG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTTTGCGATGCTCCTTaGATTGTTTCAGTTCATTCA +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFLCDAP*IVSVHS
Trigger: TGAATGAACTGAAACAATTCAAGGAGCATCGCAAAG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTATGATCATCCATCTCTaGGTATCTCTTCAAAAGCTC +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLMIIHL*VSLQKL
Trigger: GAGCTTTTGAAGAGATACTCAGAGATGGATGATCAT...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCACTTCAGTTTCTTCATaGTTCTGTGGAATTCCATGG +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFTSVSS*FCGIPW
Trigger: CCATGGAATTCCACAGAATCATGAAGAAACTGAAGT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTATTCTGGTTCAATTTaGGATCCCTTAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVYSGSI*DPLILW
Trigger: CCAGAGAATTAAGGGATCTCAAATTGAACCAGAATA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACAGGGAACTCACTTTCTaGGAAATCTTTGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDRELTF*EIFENF
Trigger: GAAATTCTCAAAGATTTCTCAGAAAGTGAGTTCCCT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGCTCTTGATGTAACATaGGGATTCTTATTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDALDVT*GFLLSC
Trigger: ACAAGACAATAAGAATCCTCATGTTACATCAAGAGC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGCTCTTGATGTAACATaGGGATTCTTATTGTCTTGT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVALDVT*GFLLSC
Trigger: ACAAGACAATAAGAATCCTCATGTTACATCAAGAGC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATTTAGCTTCATGCAGTaGATTTTCCAGCTCTCGAAT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPFSFMQ*IFQLSN
Trigger: ATTCGAGAGCTGGAAAATTCACTGCATGAAGCTAAA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTTTCCTTCCAAGTTTTaGCCTCATTGGAAAGATGCT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLFPSKF*PHWKDA
Trigger: AGCATCTTTCCAATGAGGTCAAAACTTGGAAGGAAA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCATCGATGATTGGTGCTaGTATTTCTTCATACACATT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISIDDWC*YFFIHI
Trigger: AATGTGTATGAAGAAATAGCAGCACCAATCATCGAT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTGGTATGAGAACGACTaGTTCTTTGATTCATTTTTG +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLWYEND*FFDSFL
Trigger: CAAAAATGAATCAAAGAAGCAGTCGTTCTCATACCA...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCAGCTCTTTCACTGCCTaGAAGATCAACCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFSSFTA*KINQIQ
Trigger: TTGAATTTGGTTGATCTTGCAGGCAGTGAAAGAGCT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGATAATACGTGTCTTTaGATTTCCTCCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVDNTCL*ISSQGI
Trigger: AATTCCTTGGGAGGAAATGCAAAGACACGTATTATC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGTTTTGGGTCTTCAATaGTTTCCAATGAGTATGACA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVVLGLQ*FPMSMT
Trigger: TGTCATACTCATTGGAAAGCATTGAAGACCCAAAAC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCGCATCAAACAGAGTCTaGTTCATTTGTTTTGGGTCT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFASNRV*FICFGS
Trigger: AGACCCAAAACAAATGAAGCAGACTCTGTTTGATGC...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGGAATTCTTGATCAGTaGTTTTATAATTCGACTGTG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISGILDQ*FYNSTV
Trigger: CACAGTCGAATTATAAAAGCACTGATCAAGAATTCC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATCCCTTTCTACAGTTTaGAGCGTAGAATCTCTATTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKSLSTV*SVESLF
Trigger: AAATAGAGATTCTACGCTGCAAACTGTAGAAAGGGA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAAGGACTGTTCTTGTTTaGTTTGAGACTCCTGGATTT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPRTVLV*FETPGF
Trigger: AAATCCAGGAGTCTCAAAGCAAACAAGAACAGTCCT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTTTTGGGCCTCAAATTaGTTCTTCAACTGTTCCATT +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVFWASN*FFNCSI
Trigger: AATGGAACAGTTGAAGAAGCAATTTGAGGCCCAAAA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR GCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTTTGGGCCTCAAATTaGTTCTTCAACTGTTCCATT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFWASN*FFNCSI
Trigger: AATGGAACAGTTGAAGAAGCAATTTGAGGCCCAAAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR GCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTCCATTCTCACACTTTaGATAGATAAGTTTTGGGCC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFSILTL*IDKFWA
Trigger: GGCCCAAAACTTATCTATGCAAAGTGTGAGAATGGA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265148.9
CDS-3UTR GCA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTATCTTGCTTTCCTTATaGATAGCACTTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SPSIYALSICGDSRFRKLILLSL*IALSLA
Trigger: AGCTAAAGAAAGTGCTATGCATAAGGAAAGCAAGAT...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATATCCATCTCACACTTaGATAGATAGTTTTGGGCCT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPYPSHT*IDSFGP
Trigger: AGGCCCAAAACTATCTATGCAAGTGTGAGATGGATA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000611174.4
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCTTCTGAACCCATCATaGTATATGTTTTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDLLNPS*YMFFLK
Trigger: CTTCAGGAAAAACATATACCATGATGGGTTCAGAAG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCAACCAAATTCAAATaGGATACCTTAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSTKFK*DTLTDP
Trigger: AGGATCTGTTAAGGTATCCCATTTGAATTTGGTTGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTGCTTCATTTGTTTTaGGTCTTCAATGCTTTCCAA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLLHLF*VFNAFQ
Trigger: TTGGAAAGCATTGAAGACCCAAAACAAATGAAGCAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCACAGAGCAAATCTTTTaGAACTTTGCCATCTATAAG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISTEQIF*NFAIYK
Trigger: CTTATAGATGGCAAAGTTCCAAAAGATTTGCTCTGT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACATATCACTTTTGAGTTaGTCCCTCTCAATTTGCAAG +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDISLLS*SLSICK
Trigger: CTTGCAAATTGAGAGGGACCAACTCAAAAGTGATAT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATATCACTTTTGAGTTaGTCCCTCTCAATTTGCAAG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVISLLS*SLSICK
Trigger: CTTGCAAATTGAGAGGGACCAACTCAAAAGTGATAT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAATATCACTTTTGAGTTaGTCCCTCTCAATTTGCAAG +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKISLLS*SLSICK
Trigger: CTTGCAAATTGAGAGGGACCAACTCAAAAGTGATAT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCTCTCTAACATTTGTTaGAGTTCATTTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISLSNIC*SSFFSC
Trigger: ACAGGAGAAAAATGAACTCCAACAAATGTTAGAGAG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCTTTCTTTATGGCATaGTTCTTTTCTTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISSFFMA*FFSCAT
Trigger: AGTTGCACAAGAAAAGAACCATGCCATAAAGAAAGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTTCTTGGAGTTGCTaGCTCTTTTCCTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFSWSC*LFSFSF
Trigger: AAAACTAAAGGAAAAGAGCCAGCAACTCCAAGAAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCATATGTTCTTTCAGCTaGTCATGTTTAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISICSFS*SCLTSR
Trigger: CCTTGAAGTTAAACATGACCAGCTGAAAGAACATAT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTCTTGAAGTCTTTTaGACAATCCGAGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: KLHYNIITRDRHINKVISFLEVF*TIRAFL
Trigger: TAGAAATGCTCGGATTGTCCAAAAGACTTCAAGAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTTTCTTGAAGTCTGTTaGTCAACTCGAGCATCTTAC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFFLEVC*STRASY
Trigger: GTAAGATGCTCGAGTTGACCAACAGACTTCAAGAAA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAAGGTTGCTATGAATTaGTCCCTTTCCATTTTGAGA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKKVAMN*SLSILR
Trigger: TCTCAAAATGGAAAGGGACCAATTCATAGCAACCTT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTTTTCAGGTTTTACTTaGTGGTTCTGTCGGTCTCTA +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFFSGFT*WFCRSL
Trigger: TAGAGACCGACAGAACCACCAAGTAAAACCTGAAAA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000265148.9
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATCCATGGAGCATCTCTaGTTTGCAGTAAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKSMEHL*FAVKSF
Trigger: AAAACTTTTTACTGCAAACCAGAGATGCTCCATGGA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGATCCCTTAATTCTCTaGATGGTACATCACAATCTT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKDPLIL*MVHHNL
Trigger: AAGATTGTGATGTACCATCCAGAGAATTAAGGGATC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGATCCCTTAATTCTCTaGATGGTACATCACAATCTT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDDPLIL*MVHHNL
Trigger: AAGATTGTGATGTACCATCCAGAGAATTAAGGGATC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAGTTTCTTAGTCAACTaGAAGTTATCCATCTCACAC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSFLVN*KLSISH
Trigger: GTGTGAGATGGATAACTTCCAGTTGACTAAGAAACT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000611174.4
CDS-3UTR TCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTATACAACTTCTTCTGTaGGATCAGCAACATACACAT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLIQLLL*DQQHTH
Trigger: ATGTGTATGTTGCTGATCTCACAGAAGAAGTTGTAT...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTGCTCAAAGTCCATATaGAGGGTTTTGAAATTTTGG +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFCSKSI*RVLKFW
Trigger: CCAAAATTTCAAAACCCTTCATATGGACTTTGAGCA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTTATTCTGGTTCAATTTaGGATCCCTTAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFYSGSI*DPLILW
Trigger: CCAGAGAATTAAGGGATCTCAAATTGAACCAGAATA...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATATTCTGGTTCAATTTaGGATCCCTTAATTCTCTGG +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPYSGSI*DPLILW
Trigger: CCAGAGAATTAAGGGATCTCAAATTGAACCAGAATA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAAGGGAACTCACTTTCTaGGAAATCTTTGAGAATTTC +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPRELTF*EIFENF
Trigger: GAAATTCTCAAAGATTTCTCAGAAAGTGAGTTCCCT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTGGCAAAGTAAAGACTaGATTGAAATTAAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFWQSKD*IEIKLH
Trigger: GTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCGCTCTACTTTTGAACTaGGTTCATTCTCTTGATCTT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFALLLN*VHSLDL
Trigger: AAGATCAAGAGAATGAACTCAGTTCAAAAGTAGAGC...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR TCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTTCATAGCAAAATACTaGGTCAACAAGAGAGACTAC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFFIAKY*VNKRDY
Trigger: GTAGTCTCTCTTGTTGACTCAGTATTTTGCTATGAA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTGGTATGAGAACGACTaGTTCTTTGATTCATTTTTG +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDWYEND*FFDSFL
Trigger: CAAAAATGAATCAAAGAAGCAGTCGTTCTCATACCA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGATAATACGTGTCTTTaGATTTCCTCCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPDNTCL*ISSQGI
Trigger: AATTCCTTGGGAGGAAATGCAAAGACACGTATTATC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGTTTTGGGTCTTCAATaGTTTCCAATGAGTATGACA +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPVLGLQ*FPMSMT
Trigger: TGTCATACTCATTGGAAAGCATTGAAGACCCAAAAC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTGTTTTGGGTCTTCAATaGTTTCCAATGAGTATGACA +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLVLGLQ*FPMSMT
Trigger: TGTCATACTCATTGGAAAGCATTGAAGACCCAAAAC...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTCCCTTTCTACAGTTTaGAGCGTAGAATCTCTATTT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLSLSTV*SVESLF
Trigger: AAATAGAGATTCTACGCTGCAAACTGTAGAAAGGGA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACTTCTTCTAAAGTTTaGTGCAGTTTCTCAGTAATC +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDTSSKV*CSFSVI
Trigger: GATTACTGAGAAACTGCAGCAAACTTTAGAAGAAGT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCACATTAAGAAGTTGTTaGTGTTTTTCTTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVTLRSC*CFSWSC
Trigger: GCAACTCCAAGAAAAACAGCAACAACTTCTTAATGT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTTCTGGGTCTCAAATTaGTCCTTCAAGTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLFWVSN*SFKCSI
Trigger: AATAGAACACTTGAAGGAGCAATTTGAGACCCAGAA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCAACCAAATTCAAATaGGATACCTTAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSTKFK*DTLTDP
Trigger: AGGATCTGTTAAGGTATCCCATTTGAATTTGGTTGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGACAGAGCAAATCTTTTaGAACTTTGCCATCTATAAG +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLTEQIF*NFAIYK
Trigger: CTTATAGATGGCAAAGTTCCAAAAGATTTGCTCTGT...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAACAGAGCAAATCTTTTaGAACTTTGCCATCTATAAG +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKTEQIF*NFAIYK
Trigger: CTTATAGATGGCAAAGTTCCAAAAGATTTGCTCTGT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTCTGCAGTTAGTGTTTaGGTATTTTTAGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSAVSV*VFLASK
Trigger: TTTGGAAGCTAAAAATACCCAAACACTAACTGCAGA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACTCTCTAACATTTGTTaGAGTTCATTTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKLSNIC*SSFFSC
Trigger: ACAGGAGAAAAATGAACTCCAACAAATGTTAGAGAG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGTCTTTCTTTATGGCATaGTTCTTTTCTTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLSFFMA*FFSCAT
Trigger: AGTTGCACAAGAAAAGAACCATGCCATAAAGAAAGA...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTTTCTTGGAGTTGCTaGCTCTTTTCCTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFSWSC*LFSFSF
Trigger: AAAACTAAAGGAAAAGAGCCAGCAACTCCAAGAAAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTTGAGTCCTTGGTTGTaGACTGTTCTGTTAATAACT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLLSPWL*TVLLIT
Trigger: AGTTATTAACAGAACAGTCCACAACCAAGGACTCAA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATATGTTCTTTCAGCTaGTCATGTTTAACTTCAAGG +
Preference number: 4 (lower is better)
Translates to: EIKLHYNIITRDRHINKVICSFS*SCLTSR
Trigger: CCTTGAAGTTAAACATGACCAGCTGAAAGAACATAT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTTCTTGAAGTCTTTTaGACAATCCGAGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: LHYNIITRDRHINKVISKFLEVF*TIRAFL
Trigger: TAGAAATGCTCGGATTGTCCAAAAGACTTCAAGAAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGCATAGATAAGTTTTaGGCCTCAAATTGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLCIDKF*ASNCFF
Trigger: GAAGAAGCAATTTGAGGCCCAAAACTTATCTATGCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000265148.9
CDS-3UTR CCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTTCCATGGAGCATCTCTaGTTTGCAGTAAAAAGTTTT +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFSMEHL*FAVKSF
Trigger: AAAACTTTTTACTGCAAACCAGAGATGCTCCATGGA...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGATCCCTTAATTCTCTaGATGGTACATCACAATCTT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPDPLIL*MVHHNL
Trigger: AAGATTGTGATGTACCATCCAGAGAATTAAGGGATC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR GCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCATCGATGATTGGTGCTaGTATTTCTTCATACACATT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFIDDWC*YFFIHI
Trigger: AATGTGTATGAAGAAATAGCAGCACCAATCATCGAT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGGTATGAGAACGACTaGTTCTTTGATTCATTTTTG +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLWYEND*FFDSFL
Trigger: CAAAAATGAATCAAAGAAGCAGTCGTTCTCATACCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCACATTAAGAAGTTGTTaGTGTTTTTCTTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFTLRSC*CFSWSC
Trigger: GCAACTCCAAGAAAAACAGCAACAACTTCTTAATGT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR GCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTACATTAAGAAGTTGTTaGTGTTTTTCTTGGAGTTGC +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFTLRSC*CFSWSC
Trigger: GCAACTCCAAGAAAAACAGCAACAACTTCTTAATGT...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR GCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAATCTTGCTTTCCTTATaGATAGCACTTTCTTTAGCT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPILLSL*IALSLA
Trigger: AGCTAAAGAAAGTGCTATGCATAAGGAAAGCAAGAT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTCAACCAAATTCAAATaGGATACCTTAACAGATCCT +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLSTKFK*DTLTDP
Trigger: AGGATCTGTTAAGGTATCCCATTTGAATTTGGTTGA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATCTGCAGTTAGTGTTTaGGTATTTTTAGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPSAVSV*VFLASK
Trigger: TTTGGAAGCTAAAAATACCCAAACACTAACTGCAGA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTTCTGCAGTTAGTGTTTaGGTATTTTTAGCTTCCAAA +
Preference number: 4 (lower is better)
Translates to: SIYALSICGDSRFRKLYFSAVSV*VFLASK
Trigger: TTTGGAAGCTAAAAATACCCAAACACTAACTGCAGA...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACTCTCTAACATTTGTTaGAGTTCATTTTTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPLSNIC*SSFFSC
Trigger: ACAGGAGAAAAATGAACTCCAACAAATGTTAGAGAG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTCTTTCTTTATGGCATaGTTCTTTTCTTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFSFFMA*FFSCAT
Trigger: AGTTGCACAAGAAAAGAACCATGCCATAAAGAAAGA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATTTTCTTGGAGTTGCTaGCTCTTTTCCTTTAGTTTT +
Preference number: 4 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPFSWSC*LFSFSF
Trigger: AAAACTAAAGGAAAAGAGCCAGCAACTCCAAGAAAA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTTTCTTGAAGTCTTTTaGACAATCCGAGCATTTCTA +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLFLEVF*TIRAFL
Trigger: TAGAAATGCTCGGATTGTCCAAAAGACTTCAAGAAA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CCA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTAGTTTCTTAGTCAACTaGAAGTTATCCATTCTCACA +
Preference number: 4 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLSFLVN*KLSILT
Trigger: TGTGAGAATGGATAACTTCCAGTTGACTAAGAAACT...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000265148.9
CDS TCA 90 bp CGCACGCAGACGGCCACGGCTCCTTCCTCCGCCATCCTATCAGGCTaGACTGGTCCCAGGAAAATGGCCAGGACCCTCCGCGGCCGGCAC +
Preference number: 5 (lower is better)
Translates to: RTQTATAPSSAILSG*TGPRKMARTLRGRH
Trigger: GTGCCGGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGCGGAGGAAGGAGCCGTGGCCGTCTGCGTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS CCA 90 bp CTCCTTCCTCCGCCATCCTATCAGGCTGAACTGGTCCCAGGAAAATaGCCAGGACCCTCCGCGGCCGGCACTTCAGGGCTCACAGGCCGC +
Preference number: 5 (lower is better)
Translates to: LLPPPSYQAELVPGK*PGPSAAGTSGLTGR
Trigger: GCGGCCTGTGAGCCCTGAAGTGCCGGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGCGGAGGAAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS CCA 90 bp GCAGACGGCCACGGCTCCTTCCTCCGCCATCCTATCAGGCTGAACTaGTCCCAGGAAAATGGCCAGGACCCTCCGCGGCCGGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: ADGHGSFLRHPIRLN*SQENGQDPPRPALQ
Trigger: CTGAAGTGCCGGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGCGGAGGAAGGAGCCGTGGCCGTCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp ACAAAGAGGAGTCTACTGAGTTTTGCACTCAGGCACATCCTTGCCTaGGGAGGCGTGCCAAGGACCTGGCTGAGAATCCACACTCTCTGC +
Preference number: 5 (lower is better)
Translates to: TKRSLLSFALRHILA*GGVPRTWLRIHTLC
Trigger: GCAGAGAGTGTGGATTCTCAGCCAGGTCCTTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGTGCAAAACTCAGTAGACTCCTCTTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS GCA 90 bp AGTGACAAAGAGGAGTCTACTGAGTTTTGCACTCAGGCACATCCTTaGCTGAGGAGGCGTGCCAAGGACCTGGCTGAGAATCCACACTCT +
Preference number: 5 (lower is better)
Translates to: SDKEESTEFCTQAHP*LRRRAKDLAENPHS
Trigger: AGAGTGTGGATTCTCAGCCAGGTCCTTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGTGCAAAACTCAGTAGACTCCTCTTTGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS GCA 90 bp ATGCTGGATCTCCAGAGAAGTGACAAAGAGGAGTCTACTGAGTTTTaGACTCAGGCACATCCTTGCCTGAGGAGGCGTGCCAAGGACCTG +
Preference number: 5 (lower is better)
Translates to: MLDLQRSDKEESTEF*TQAHPCLRRRAKDL
Trigger: CAGGTCCTTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGTGCAAAACTCAGTAGACTCCTCTTTGTCACTTCTCTGGAGATCCAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCACTCAGGCACATCCTaGCCTGAGGAGGCGTGCCAA +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISHSGTS*PEEACQ
Trigger: TTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGTG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp ACAATGCCGCTGCCACCTCCACAAGTTAAGGGTTTATTTGAAGGCTaGGGATCAGTATGTTCTGATATCACTGAGGTATCTTGGGCCTGT +
Preference number: 5 (lower is better)
Translates to: TMPLPPPQVKGLFEG*GSVCSDITEVSWAC
Trigger: ACAGGCCCAAGATACCTCAGTGATATCAGAACATACTGATCCTCAGCCTTCAAATAAACCCTTAACTTGTGGAGGTGGCAGCGGCATTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCACTCAGGCACATCCTaGCCTGAGGAGGCGTGCCAA +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVHSGTS*PEEACQ
Trigger: TTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGTG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAACCTGCAGCGCCTGTTaGAGCAGCTCTTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKTCSAC*SSSFTA
Trigger: GGCAGTGAAAGAGCTGCTCAAACAGGCGCTGCAGGT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACACTCAGGCACATCCTaGCCTGAGGAGGCGTGCCAA +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPHSGTS*PEEACQ
Trigger: TTGGCACGCCTCCTCAGGCAAGGATGTGCCTGAGTG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTACCTGCAGCGCCTGTTaGAGCAGCTCTTTCACTGCC +
Preference number: 5 (lower is better)
Translates to: SIYALSICGDSRFRKLYFTCSAC*SSSFTA
Trigger: GGCAGTGAAAGAGCTGCTCAAACAGGCGCTGCAGGT...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATATTACAGCCTTCCTaGAGCCGCACACCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVILQPS*SRTPAA
Trigger: CGCTGCAGGTGTGCGGCTCAAGGAAGGCTGTAATAT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAATATTACAGCCTTCCTaGAGCCGCACACCTGCAGCG +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKILQPS*SRTPAA
Trigger: CGCTGCAGGTGTGCGGCTCAAGGAAGGCTGTAATAT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTCTTGCCAGTGTTGTaGAGTCCTTGGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRFLPVL*SPWLWT
Trigger: AGTCCACAACCAAGGACTCAACAACACTGGCAAGAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGCTGAATCTTTGGGTTaGAATTGCTCCATCTCACTC +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRAESLG*NCSISL
Trigger: GAGTGAGATGGAGCAATTCAAACCCAAAGATTCAGC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTCTCTAAGGTTTTCCTaGAGCTGGTCTCTCTCTACT +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRSLRFS*SWSLST
Trigger: AGTAGAGAGAGACCAGCTCAAGGAAAACCTTAGAGA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACAGGCTTTCCTTGAGTaGGTCTCTCTCCAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKQAFLE*VSLQFE
Trigger: CTCAAACTGGAGAGAGACCAACTCAAGGAAAGCCTG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCAGGCTTTCCTTGAGTaGGTCTCTCTCCAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDQAFLE*VSLQFE
Trigger: CTCAAACTGGAGAGAGACCAACTCAAGGAAAGCCTG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCCAGATCTCTAGCTTaGGTTTCTTGCAGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISSRSLA*VSCRLS
Trigger: GGAAAGCCTGCAAGAAACCAAAGCTAGAGATCTGGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp TTTCATTTTCTCCTTCAGCTCCAGATTTTCACTTCTAAGAAAGGCTaGTTCTCTCTTGGCATCAAGGGCTACAGTTTCAGCATCAAACAG +
Preference number: 5 (lower is better)
Translates to: FHFLLQLQIFTSKKG*FSLGIKGYSFSIKQ
Trigger: CTGTTTGATGCTGAAACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCTTTCTTAGAAGTGAAAATCTGGAGCTGAAGGAGAAAATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp TCTCGAATTTTCTCTGTGGTTAACTGTGTAGCTCTTGATGTAACATaGGGATTCTTATTGTCTTGTGTGGTAGGATTAACCTGGGCACCA +
Preference number: 5 (lower is better)
Translates to: SRIFSVVNCVALDVT*GFLLSCVVGLTWAP
Trigger: TGGTGCCCAGGTTAATCCTACCACACAAGACAATAAGAATCCTCATGTTACATCAAGAGCTACACAGTTAACCACAGAGAAAATTCGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 90 bp GCCTTTCCATTTCTATTCTTGCCAGTGTTGTTGAGTCCTTGGTTGTaGACTGTTCTGTTAATAACTCCAGTTCATTCATTGTTTCCTGAG +
Preference number: 5 (lower is better)
Translates to: AFPFLFLPVLLSPWL*TVLLITPVHSLFPE
Trigger: CTCAGGAAACAATGAATGAACTGGAGTTATTAACAGAACAGTCCACAACCAAGGACTCAACAACACTGGCAAGAATAGAAATGGAAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAAGGCTGATTCTCTCTaGGCATCAAGGGCTACAGTT +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKKADSL*ASRATV
Trigger: AACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCTT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTCTTCAGATTTGTCTaGTATCTCTTTCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRLFRFV*YLFPQP
Trigger: AGGCTGAGGAAAGAGATACAAGACAAATCTGAAGAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTGGTCCCTCTCAATTaGCAAGCTTTCTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISLVPLN*QAFLEL
Trigger: CAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTGTTGCTGTTTTTCTaGGAGTTGCTGGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRLLLFF*ELLALF
Trigger: GAAAAGAGCCAGCAACTCCAAGAAAAACAGCAACAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTCTTGCCAGTGTTGTaGAGTCCTTGGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFLPVL*SPWLWT
Trigger: AGTCCACAACCAAGGACTCAACAACACTGGCAAGAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTGTTCTTGTTTGCTTaGAGACTCCTGGATTTTAGC +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRLFLFA*RLLDFS
Trigger: GCTAAAATCCAGGAGTCTCAAAGCAAACAAGAACAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGCTGAATCTTTGGGTTaGAATTGCTCCATCTCACTC +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISAESLG*NCSISL
Trigger: GAGTGAGATGGAGCAATTCAAACCCAAAGATTCAGC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCTGGTCACTTTCAGATaGAAGAACTTCTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISLVTFR*KNFLQP
Trigger: AGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCAG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGCTGAATCCTTGGCTTaGCGATGCTCCTTGAATTGT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVAESLA*RCSLNC
Trigger: ACAATTCAAGGAGCATCGCAAAGCCAAGGATTCAGC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCTTCTGGGTCTCAAATaGCTCCTTCAAGTGTTCTAT +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRLLGLK*LLQVFY
Trigger: ATAGAACACTTGAAGGAGCAATTTGAGACCCAGAAG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCAGGCTTTCCTTGAGTaGGTCTCTCTCCAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFQAFLE*VSLQFE
Trigger: CTCAAACTGGAGAGAGACCAACTCAAGGAAAGCCTG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTCTAGCTTTGGTTTCTaGCAGGCTTTCCTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: SPSIYALSICGDSRFRKLSSFGF*QAFLEL
Trigger: CAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAGA...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCCAGATCTCTAGCTTaGGTTTCTTGCAGGCTTTCC +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSRSLA*VSCRLS
Trigger: GGAAAGCCTGCAAGAAACCAAAGCTAGAGATCTGGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGTTTTGGGCCTCAAATaGCTTCTTCAACTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRVLGLK*LLQLFH
Trigger: ATGGAACAGTTGAAGAAGCAATTTGAGGCCCAAAAC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCCTGTTCCCACTCTTaGGATATGGTAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISSCSHS*DMVALL
Trigger: AAGAAGTGCTACCATATCCAAAGAGTGGGAACAGGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAAGAGCTTTTGTGTTTaGTACAATGCCGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKKSFCV*YNAAAT
Trigger: GGTGGCAGCGGCATTGTACAAAACACAAAAGCTCTT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp GTTGTGGACTGTTCTGTTAATAACTCCAGTTCATTCATTGTTTCCTaGGTCTCACTGACTTCTTTCACATTAGGCAGTAACTCTTGTTCC +
Preference number: 5 (lower is better)
Translates to: VVDCSVNNSSSFIVS*VSLTSFTLGSNSCS
Trigger: GGAACAAGAGTTACTGCCTAATGTGAAAGAAGTCAGTGAGACTCAGGAAACAATGAATGAACTGGAGTTATTAACAGAACAGTCCACAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS GCA 90 bp TGCTGCAGTTTCTCAGTAATCAGTGTTTTCTCCCTTTCTACAGTTTaGAGCGTAGAATCTCTATTTTCTAATTGTTCCTTCAGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: CCSFSVISVFSLSTV*SVESLFSNCSFSCS
Trigger: GGAACAGCTGAAGGAACAATTAGAAAATAGAGATTCTACGCTGCAAACTGTAGAAAGGGAGAAAACACTGATTACTGAGAAACTGCAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 90 bp AGTACTGGCAAACTGGAGAGCAGTAAGTGTTTCATCAAAAGATACTaGAGTAATTGTGCAGATAATACGTGTCTTTGCATTTCCTCCCAA +
Preference number: 5 (lower is better)
Translates to: STGKLESSKCFIKRY*SNCADNTCLCISSQ
Trigger: TTGGGAGGAAATGCAAAGACACGTATTATCTGCACAATTACTCCAGTATCTTTTGATGAAACACTTACTGCTCTCCAGTTTGCCAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 90 bp TTCTGTCGGTCTCTAGCTATCATTTCCCTTAAGGTTGCTATGAATTaGTCCCTTTCCATTTTGAGAGATTCTTTTATCCTCCTTAGCTCA +
Preference number: 5 (lower is better)
Translates to: FCRSLAIISLKVAMN*SLSILRDSFILLSS
Trigger: TGAGCTAAGGAGGATAAAAGAATCTCTCAAAATGGAAAGGGACCAATTCATAGCAACCTTAAGGGAAATGATAGCTAGAGACCGACAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGCCTGATTTAGTAGCTTaGTTGCTGGATTCCATTCTA +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRPDLVA*LLDSIL
Trigger: TAGAATGGAATCCAGCAACAAAGCTACTAAATCAGG...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCAAGGCTGATTCTCTCTaGGCATCAAGGGCTACAGTT +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFKADSL*ASRATV
Trigger: AACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCTT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAAAGGCTGATTCTCTCTaGGCATCAAGGGCTACAGTT +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPKADSL*ASRATV
Trigger: AACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCTT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTGGAGCTCTTCAGATTaGTCTTGTATCTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: SPSIYALSICGDSRFRKLWSSSD*SCISFL
Trigger: GAGGAAAGAGATACAAGACAAATCTGAAGAGCTCCA...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTGGAGCTCTTCAGATTaGTCTTGTATCTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISWSSSD*SCISFL
Trigger: GAGGAAAGAGATACAAGACAAATCTGAAGAGCTCCA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTCTCCCTTTCTACAGTTaGCAGCGTAGAATCTCTATT +
Preference number: 5 (lower is better)
Translates to: SPSIYALSICGDSRFRKLLPFYS*QRRISI
Trigger: AATAGAGATTCTACGCTGCAAACTGTAGAAAGGGAG...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTGGTCCCTCTCAATTaGCAAGCTTTCTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDLVPLN*QAFLEL
Trigger: CAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTGCAACTATCTCTTGTaGCTTTTTAAGTTCATCCCC +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRCNYLL*LFKFIP
Trigger: GGGGATGAACTTAAAAAGCAACAAGAGATAGTTGCA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTGTTGAGTCCTTGGTaGTGGACTGTTCTGTTAATA +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRLLSPW*WTVLLI
Trigger: TATTAACAGAACAGTCCACAACCAAGGACTCAACAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACAGTGTTGTTGAGTCCTaGGTTGTGGACTGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSVVES*VVDCSV
Trigger: AACAGAACAGTCCACAACCAAGGACTCAACAACACT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTTCTTGCCAGTGTTGTaGAGTCCTTGGTTGTGGACT +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLFLPVL*SPWLWT
Trigger: AGTCCACAACCAAGGACTCAACAACACTGGCAAGAA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTCTATTCTTGCCAGTGTaGTTGAGTCCTTGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLLFLPV*LSPWLW
Trigger: CCACAACCAAGGACTCAACAACACTGGCAAGAATAG...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTATTCTTGCCAGTGTaGTTGAGTCCTTGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFLFLPV*LSPWLW
Trigger: CCACAACCAAGGACTCAACAACACTGGCAAGAATAG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACTATTCTTGCCAGTGTaGTTGAGTCCTTGGTTGTGG +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPLFLPV*LSPWLW
Trigger: CCACAACCAAGGACTCAACAACACTGGCAAGAATAG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCTGTTCTTGTTTGCTTaGAGACTCCTGGATTTTAGC +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISLFLFA*RLLDFS
Trigger: GCTAAAATCCAGGAGTCTCAAAGCAAACAAGAACAG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCATCTTTGGGTTTGAATaGCTCCATCTCACTCACGAT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISIFGFE*LHLTHD
Trigger: ATCGTGAGTGAGATGGAGCAATTCAAACCCAAAGAT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCTGGTCACTTTCAGATaGAAGAACTTCTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDLVTFR*KNFLQP
Trigger: AGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCAG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTGCTTTGCGATGCTCCTaGAATTGTTTCAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: SPSIYALSICGDSRFRKLALRCS*NCFSSF
Trigger: GAATGAACTGAAACAATTCAAGGAGCATCGCAAAGC...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTGCTGAATCCTTGGCTTaGCGATGCTCCTTGAATTGT +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLAESLA*RCSLNC
Trigger: ACAATTCAAGGAGCATCGCAAAGCCAAGGATTCAGC...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGTTCTTCTTGACTTTCTaGAAGTCTGTTGGTCAACTC +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRFFLTF*KSVGQL
Trigger: GAGTTGACCAACAGACTTCAAGAAAGTCAAGAAGAA...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCTTCTGGGTCTCAAATaGCTCCTTCAAGTGTTCTAT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISLLGLK*LLQVFY
Trigger: ATAGAACACTTGAAGGAGCAATTTGAGACCCAGAAG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCTCTAAGGTTTTCCTaGAGCTGGTCTCTCTCTACT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSLRFS*SWSLST
Trigger: AGTAGAGAGAGACCAGCTCAAGGAAAACCTTAGAGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATCTAGCTTTGGTTTCTaGCAGGCTTTCCTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKSSFGF*QAFLEL
Trigger: CAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAGA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTCTAGCTTTGGTTTCTaGCAGGCTTTCCTTGAGTTG +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSSFGF*QAFLEL
Trigger: CAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAGA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTTTCAGGTTTTACTaGGTGGTTCTGTCGGTCTCT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISFFRFY*VVLSVS
Trigger: AGAGACCGACAGAACCACCAAGTAAAACCTGAAAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACGGTATCTTGGGCCTGTaGACTTCTTCTGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDGILGL*TSSEIF
Trigger: GAAAATCTCAGAAGAAGTCAACAGGCCCAAGATACC...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGTATCTTGGGCCTGTaGACTTCTTCTGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKGILGL*TSSEIF
Trigger: GAAAATCTCAGAAGAAGTCAACAGGCCCAAGATACC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCAAGAGCTTTTGTGTTTaGTACAATGCCGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFKSFCV*YNAAAT
Trigger: GGTGGCAGCGGCATTGTACAAAACACAAAAGCTCTT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAAAGAGCTTTTGTGTTTaGTACAATGCCGCTGCCACC +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPKSFCV*YNAAAT
Trigger: GGTGGCAGCGGCATTGTACAAAACACAAAAGCTCTT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTTTTTCAGGTTTTACTaGGTGGTTCTGTCGGTCCTG +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVFFRFY*VVLSVL
Trigger: CAGGACCGACAGAACCACCAAGTAAAACCTGAAAAA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS CCA 90 bp AGTCTGTCACAGGTCCTAGAAAGCTCTCCTTCTTTCTTTATGGCATaGTTCTTTTCTTGTGCAACTATCTCTTGTTGCTTTTTAAGTTCA +
Preference number: 5 (lower is better)
Translates to: SLSQVLESSPSFFMA*FFSCATISCCFLSS
Trigger: TGAACTTAAAAAGCAACAAGAGATAGTTGCACAAGAAAAGAACCATGCCATAAAGAAAGAAGGAGAGCTTTCTAGGACCTGTGACAGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAGTACCATTGTAGCCTaGTATGGCAGAATCGATGAT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSTIVA*YGRIDD
Trigger: ATCATCGATTCTGCCATACAAGGCTACAATGGTACT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACAGTACCATTGTAGCCTaGTATGGCAGAATCGATGAT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSTIVA*YGRIDD
Trigger: ATCATCGATTCTGCCATACAAGGCTACAATGGTACT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAGTACCATTGTAGCCTaGTATGGCAGAATCGATGAT +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKSTIVA*YGRIDD
Trigger: ATCATCGATTCTGCCATACAAGGCTACAATGGTACT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTCTGCTTCATTTGTTTaGGGTCTTCAATGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISSASFV*GLQCFP
Trigger: TGGAAAGCATTGAAGACCCAAAACAAATGAAGCAGA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCAGAGTCTGCTTCATTaGTTTTGGGTCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLQSLLH*FWVFNA
Trigger: AGCATTGAAGACCCAAAACAAATGAAGCAGACTCTG...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCAGAGTCTGCTTCATTaGTTTTGGGTCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDQSLLH*FWVFNA
Trigger: AGCATTGAAGACCCAAAACAAATGAAGCAGACTCTG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCTCTTCAGATTTGTCTaGTATCTCTTTCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLLFRFV*YLFPQP
Trigger: AGGCTGAGGAAAGAGATACAAGACAAATCTGAAGAG...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGACCATCTTATACTTTaGCTCAAAGTCCATATGAAG +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRDHLIL*LKVHMK
Trigger: CTTCATATGGACTTTGAGCAAAAGTATAAGATGGTC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTCCCTTTCTACAGTTaGCAGCGTAGAATCTCTATT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLPFYS*QRRISI
Trigger: AATAGAGATTCTACGCTGCAAACTGTAGAAAGGGAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTTTGGTCCCTCTCAATTaGCAAGCTTTCTTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SIYALSICGDSRFRKLYFLVPLN*QAFLEL
Trigger: CAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCAA...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGAATATCACTTTTGAGTaGGTCCCTCTCAATTTGCAA +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRNITFE*VPLNLQ
Trigger: TTGCAAATTGAGAGGGACCAACTCAAAAGTGATATT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGAATTGTTTCTTGATGTaGTTTCAGAGACTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRNCFLM*FQRLKS
Trigger: GCTCTTGAGTCTCTGAAACAACATCAAGAAACAATT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGGGCATGGTTCTTTTCTaGTGCAACTATCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLGMVLF*CNYLLL
Trigger: CAACAAGAGATAGTTGCACAAGAAAAGAACCATGCC...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGGCATGGTTCTTTTCTaGTGCAACTATCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKGMVLF*CNYLLL
Trigger: CAACAAGAGATAGTTGCACAAGAAAAGAACCATGCC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTGTTGCTGTTTTTCTaGGAGTTGCTGGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDLLLFF*ELLALF
Trigger: GAAAAGAGCCAGCAACTCCAAGAAAAACAGCAACAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGTTGTTGCTGTTTTTCTaGGAGTTGCTGGCTCTTTTC +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLLLLFF*ELLALF
Trigger: GAAAAGAGCCAGCAACTCCAAGAAAAACAGCAACAA...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTAGTGTTGTTGAGTCCTaGGTTGTGGACTGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLSVVES*VVDCSV
Trigger: AACAGAACAGTCCACAACCAAGGACTCAACAACACT...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCTTTCCATTTCTATTCTaGCCAGTGTTGTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISFPFLF*PVLLSP
Trigger: AGGACTCAACAACACTGGCAAGAATAGAAATGGAAA...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTGTTCTTGTTTGCTTaGAGACTCCTGGATTTTAGC +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLFLFA*RLLDFS
Trigger: GCTAAAATCCAGGAGTCTCAAAGCAAACAAGAACAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATCTTTGGGTTTGAATaGCTCCATCTCACTCACGAT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVIFGFE*LHLTHD
Trigger: ATCGTGAGTGAGATGGAGCAATTCAAACCCAAAGAT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCTGAATCTTTGGGTTaGAATTGCTCCATCTCACTC +
Preference number: 5 (lower is better)
Translates to: SIYALSICGDSRFRKLYFAESLG*NCSISL
Trigger: GAGTGAGATGGAGCAATTCAAACCCAAAGATTCAGC...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAAGTAGTGCTGAATCTTaGGGTTTGAATTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKSSAES*GLNCSI
Trigger: GATGGAGCAATTCAAACCCAAAGATTCAGCACTACT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAGTAGTGCTGAATCTTaGGGTTTGAATTGCTCCATC +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVSSAES*GLNCSI
Trigger: GATGGAGCAATTCAAACCCAAAGATTCAGCACTACT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTCTGGTCACTTTCAGATaGAAGAACTTCTTGCAGCCT +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLLVTFR*KNFLQP
Trigger: AGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCAG...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGCTTTGCGATGCTCCTaGAATTGTTTCAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKALRCS*NCFSSF
Trigger: GAATGAACTGAAACAATTCAAGGAGCATCGCAAAGC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTTCTGGGTCTCAAATaGCTCCTTCAAGTGTTCTAT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLLGLK*LLQVFY
Trigger: ATAGAACACTTGAAGGAGCAATTTGAGACCCAGAAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATCTCTAAGGTTTTCCTaGAGCTGGTCTCTCTCTACT +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPSLRFS*SWSLST
Trigger: AGTAGAGAGAGACCAGCTCAAGGAAAACCTTAGAGA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTTTTCAGGTTTTACTaGGTGGTTCTGTCGGTCTCT +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKFFRFY*VVLSVS
Trigger: AGAGACCGACAGAACCACCAAGTAAAACCTGAAAAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCTCCTGTTCCCACTCTTaGGATATGGTAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFSCSHS*DMVALL
Trigger: AAGAAGTGCTACCATATCCAAAGAGTGGGAACAGGA...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATCCTGTTCCCACTCTTaGGATATGGTAGCACTTCTT +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPSCSHS*DMVALL
Trigger: AAGAAGTGCTACCATATCCAAAGAGTGGGAACAGGA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGGTATCTTGGGCCTGTaGACTTCTTCTGAGATTTTC +
Preference number: 5 (lower is better)
Translates to: SIYALSICGDSRFRKLYFGILGL*TSSEIF
Trigger: GAAAATCTCAGAAGAAGTCAACAGGCCCAAGATACC...AAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGAAGTTAAGGGTTTATTaGAAGGCTGAGGATCAGTAT +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRKLRVY*KAEDQY
Trigger: ATACTGATCCTCAGCCTTCAAATAAACCCTTAACTT...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCCTTTCCTTCCAAGTTTaGACCTCATTGGAAAGATGC +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLSFQV*TSLERC
Trigger: GCATCTTTCCAATGAGGTCAAAACTTGGAAGGAAAG...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCTTTCCTTCCAAGTTTaGACCTCATTGGAAAGATGC +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDLSFQV*TSLERC
Trigger: GCATCTTTCCAATGAGGTCAAAACTTGGAAGGAAAG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp ACAAAGTCATTTCCAAATAAGGAATGCTGGATCTCCAGAGAAGTGACAAAGAGGGACAAAGGCCTAAACTaGAGTTATCAAAATAGCGAA +
Preference number: 5 (lower is better)
Translates to: TKSFPNKECWISREVTKRDKGLN*SYQNSE
Trigger: TTCGCTATTTTGATAACTCAAGTTTAGGCCTTTGTC...CCTCTTTGTCACTTCTCTGGAGATCCAGCATTCCTTATTTGGAAATGACTTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 90 bp GGCAAATATAGTACCATTGTAGCCTTGTATGGCAGAATCGATGATTaGTGCTGCTATTTCTTCATACACATTTTTGGTAGTTTCATTACC +
Preference number: 5 (lower is better)
Translates to: GKYSTIVALYGRIDD*CCYFFIHIFGSFIT
Trigger: GGTAATGAAACTACCAAAAATGTGTATGAAGAAATAGCAGCACCAATCATCGATTCTGCCATACAAGGCTACAATGGTACTATATTTGCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000514974.1
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTCTGCTTCATTTGTTTaGGGTCTTCAATGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDSASFV*GLQCFP
Trigger: TGGAAAGCATTGAAGACCCAAAACAAATGAAGCAGA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCAGAGTCTGCTTCATTaGTTTTGGGTCTTCAATGCT +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFQSLLH*FWVFNA
Trigger: AGCATTGAAGACCCAAAACAAATGAAGCAGACTCTG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACTCTTCAGATTTGTCTaGTATCTCTTTCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPLFRFV*YLFPQP
Trigger: AGGCTGAGGAAAGAGATACAAGACAAATCTGAAGAG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGGAGCTCTTCAGATTaGTCTTGTATCTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLWSSSD*SCISFL
Trigger: GAGGAAAGAGATACAAGACAAATCTGAAGAGCTCCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTCCCTTTCTACAGTTaGCAGCGTAGAATCTCTATT +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFLPFYS*QRRISI
Trigger: AATAGAGATTCTACGCTGCAAACTGTAGAAAGGGAG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTAATATCACTTTTGAGTaGGTCCCTCTCAATTTGCAA +
Preference number: 5 (lower is better)
Translates to: SPSIYALSICGDSRFRKLNITFE*VPLNLQ
Trigger: TTGCAAATTGAGAGGGACCAACTCAAAAGTGATATT...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTGCAACTATCTCTTGTaGCTTTTTAAGTTCATCCCC +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVCNYLL*LFKFIP
Trigger: GGGGATGAACTTAAAAAGCAACAAGAGATAGTTGCA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGCATGGTTCTTTTCTaGTGCAACTATCTCTTGTTG +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPGMVLF*CNYLLL
Trigger: CAACAAGAGATAGTTGCACAAGAAAAGAACCATGCC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCCTCACTCATCTCTTCTaGTACATTAAGAAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISLTHLF*YIKKLL
Trigger: CAACAACTTCTTAATGTACAAGAAGAGATGAGTGAG...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTTGTTGAGTCCTTGGTaGTGGACTGTTCTGTTAATA +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVLLSPW*WTVLLI
Trigger: TATTAACAGAACAGTCCACAACCAAGGACTCAACAA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATTGTTGAGTCCTTGGTaGTGGACTGTTCTGTTAATA +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKLLSPW*WTVLLI
Trigger: TATTAACAGAACAGTCCACAACCAAGGACTCAACAA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTTTCCATTTCTATTCTaGCCAGTGTTGTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVFPFLF*PVLLSP
Trigger: AGGACTCAACAACACTGGCAAGAATAGAAATGGAAA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTTCCATTTCTATTCTaGCCAGTGTTGTTGAGTCCT +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFPFLF*PVLLSP
Trigger: AGGACTCAACAACACTGGCAAGAATAGAAATGGAAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAGCGATGCTCCTTGAATaGTTTCAGTTCATTCACTTT +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKAMLLE*FQFIHF
Trigger: AAAGTGAATGAACTGAAACAATTCAAGGAGCATCGC...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGCGATGCTCCTTGAATaGTTTCAGTTCATTCACTTT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVAMLLE*FQFIHF
Trigger: AAAGTGAATGAACTGAAACAATTCAAGGAGCATCGC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGCTTTGCGATGCTCCTaGAATTGTTTCAGTTCATTC +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPALRCS*NCFSSF
Trigger: GAATGAACTGAAACAATTCAAGGAGCATCGCAAAGC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTCTTCTTGACTTTCTaGAAGTCTGTTGGTCAACTC +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFFLTF*KSVGQL
Trigger: GAGTTGACCAACAGACTTCAAGAAAGTCAAGAAGAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTTCTTCTTGACTTTCTaGAAGTCTGTTGGTCAACTC +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVFFLTF*KSVGQL
Trigger: GAGTTGACCAACAGACTTCAAGAAAGTCAAGAAGAA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGTTTTGGGCCTCAAATaGCTTCTTCAACTGTTCCAT +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPVLGLK*LLQLFH
Trigger: ATGGAACAGTTGAAGAAGCAATTTGAGGCCCAAAAC...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACAGGATTCTTATTGTCTaGTGTGGTAGGATTAACCTG +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDRILIV*CGRINL
Trigger: CAGGTTAATCCTACCACACAAGACAATAAGAATCCT...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAGTTAAGGGTTTATTaGAAGGCTGAGGATCAGTAT +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISKLRVY*KAEDQY
Trigger: ATACTGATCCTCAGCCTTCAAATAAACCCTTAACTT...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTTTCCTTCCAAGTTTaGACCTCATTGGAAAGATGC +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFLSFQV*TSLERC
Trigger: GCATCTTTCCAATGAGGTCAAAACTTGGAAGGAAAG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTCCATCCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTATTCTCACAAGTTACTaGTTTGTGAGCCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: SPSIYALSICGDSRFRKLILTSY*FVSLSF
Trigger: AAAAGAGAGGCTCACAAACAAGTAACTTGTGAGAAT...AAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGGATGGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAAATTCCGTTCCTTGCATaGAGAGGGTGTAATTTGTTT +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKIPFLA*RGCNLF
Trigger: AAACAAATTACACCCTCTCAATGCAAGGAACGGAAT...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCGACAAAGGCCTAAACTaGAGTTATCAAAATAGCGAA +
Preference number: 5 (lower is better)
Translates to: KLHYNIITRDRHINKVISDKGLN*SYQNSE
Trigger: TTCGCTATTTTGATAACTCAAGTTTAGGCCTTTGTC...GGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCACCAATTTAGAGAGTTaGTATAGGGATTGGGATAGG +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVTNLES*YRDWDR
Trigger: CCTATCCCAATCCCTATACAAACTCTCTAAATTGGT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS CCA 90 bp GTTTGTAGGCCTGTAGCTTCAATTTCTCTTATATATCCTCTAAGGTaGTCTCTCTCTGTTTCAAATGACTTCTGTAATTCCTTTAGAACT +
Preference number: 5 (lower is better)
Translates to: VCRPVASISLIYPLR*SLSVSNDFCNSFRT
Trigger: AGTTCTAAAGGAATTACAGAAGTCATTTGAAACAGAGAGAGACCACCTTAGAGGATATATAAGAGAAATTGAAGCTACAGGCCTACAAAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACCCATCACTAAGTTTCTaGATCACTTGTCCCAAAATA +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDPSLSF*ITCPKI
Trigger: TATTTTGGGACAAGTGATCAAGAAACTTAGTGATGG...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGTATGAAACCACCAACTaGTCCATCACTAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLYETTN*SITKFL
Trigger: AAGAAACTTAGTGATGGACAAGTTGGTGGTTTCATA...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCTATGAAACCACCAACTaGTCCATCACTAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVYETTN*SITKFL
Trigger: AAGAAACTTAGTGATGGACAAGTTGGTGGTTTCATA...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTCCTGATTTAGTAGCTTaGTTGCTGGATTCCATTCTA +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLPDLVA*LLDSIL
Trigger: TAGAATGGAATCCAGCAACAAAGCTACTAAATCAGG...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCACCTGATTTAGTAGCTTaGTTGCTGGATTCCATTCTA +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPPDLVA*LLDSIL
Trigger: TAGAATGGAATCCAGCAACAAAGCTACTAAATCAGG...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTCTGCTTCATTTGTTTaGGGTCTTCAATGCTTTCCA +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLSASFV*GLQCFP
Trigger: TGGAAAGCATTGAAGACCCAAAACAAATGAAGCAGA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCAATTGTTTCTTGATGTaGTTTCAGAGACTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVNCFLM*FQRLKS
Trigger: GCTCTTGAGTCTCTGAAACAACATCAAGAAACAATT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTGCAACTATCTCTTGTaGCTTTTTAAGTTCATCCCC +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLCNYLL*LFKFIP
Trigger: GGGGATGAACTTAAAAAGCAACAAGAGATAGTTGCA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGCTCACTCATCTCTTCTaGTACATTAAGAAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLLTHLF*YIKKLL
Trigger: CAACAACTTCTTAATGTACAAGAAGAGATGAGTGAG...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAACTCACTCATCTCTTCTaGTACATTAAGAAGTTGTTG +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKLTHLF*YIKKLL
Trigger: CAACAACTTCTTAATGTACAAGAAGAGATGAGTGAG...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTTTAGTTCTTCTTaGGTTTGTAGGCCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVIFSSS*VCRPVA
Trigger: AGCTACAGGCCTACAAACCAAAGAAGAACTAAAAAT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACTTCATCATGACTTTCTaGAAGTCTTTTGGACAATCC +
Preference number: 5 (lower is better)
Translates to: VKTELKLSCTTTSLPGIDFIMTF*KSFGQS
Trigger: GGATTGTCCAAAAGACTTCAAGAAAGTCATGATGAA...GTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTTCCAAATGGTACATCACAATCTaGTTGAAGGTGCTGTATTTT +
Preference number: 5 (lower is better)
Translates to: LHYNIITRDRHINKVISKWYITI*LKVLYF
Trigger: AAAATACAGCACCTTCAACAAGATTGTGATGTACCA...TTTGGAAATGACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp CCATATATGCTTTATCTATCTGTGGGGACTCCAGGTTTAGAAAACTTTACTTTGTGGTACATCACAATCTaGTTGAAGGTGCTGTATTTT +
Preference number: 5 (lower is better)
Translates to: PYMLYLSVGTPGLENFTLWYITI*LKVLYF
Trigger: AAAATACAGCACCTTCAACAAGATTGTGATGTACCA...CAAAGTAAAGTTTTCTAAACCTGGAGTCCCCACAGATAGATAAAGCATATATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000380026.8
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCATTCTCACAAGTTACTaGTTTGTGAGCCTCTCTTTT +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVILTSY*FVSLSF
Trigger: AAAAGAGAGGCTCACAAACAAGTAACTTGTGAGAAT...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCATTCCGTTCCTTGCATaGAGAGGGTGTAATTTGTTT +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFIPFLA*RGCNLF
Trigger: AAACAAATTACACCCTCTCAATGCAAGGAACGGAAT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp GAAATTAAGCTGCACTACAACATCATTACCAGGGATAGACACATAAACAAAGTCGACAAAGGCCTAAACTaGAGTTATCAAAATAGCGAA +
Preference number: 5 (lower is better)
Translates to: EIKLHYNIITRDRHINKVDKGLN*SYQNSE
Trigger: TTCGCTATTTTGATAACTCAAGTTTAGGCCTTTGTC...GACTTTGTTTATGTGTCTATCCCTGGTAATGATGTTGTAGTGCAGCTTAATTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp TTGCTGGATTCCATTCTATCTCACTTAATGTATCAAGAGTGTTACTaGAAACATCAGACTCTGAACAGACAGATTCATCAATTTCTCGTA +
Preference number: 5 (lower is better)
Translates to: LLDSILSHLMYQECY*KHQTLNRQIHQFLV
Trigger: TACGAGAAATTGATGAATCTGTCTGTTCAGAGTCTGATGTTTTCAGTAACACTCTTGATACATTAAGTGAGATAGAATGGAATCCAGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 90 bp CTCGAATCAAATTTTTGGGCTTCTTTAGAGAGATTAACTATTTCCTaGTTCATTCTCTCATTCTCCTCAAGGACCATCTTATACTTTTGC +
Preference number: 5 (lower is better)
Translates to: LESNFWASLERLTIS*FILSFSSRTILYFC
Trigger: GCAAAAGTATAAGATGGTCCTTGAGGAGAATGAGAGAATGAATCAGGAAATAGTTAATCTCTCTAAAGAAGCCCAAAAATTTGATTCGAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS GCA 90 bp AAATATAGTACCATTGTAGCCTTGTATGGCAGAATCGATGATTGGTaGTGCTATTTCTTCATACACATTTTTGGTAGTTTCATTACCATG +
Preference number: 5 (lower is better)
Translates to: KYSTIVALYGRIDDW*CYFFIHIFGSFITM
Trigger: CATGGTAATGAAACTACCAAAAATGTGTATGAAGAAATAGCAGCACCAATCATCGATTCTGCCATACAAGGCTACAATGGTACTATATTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000514974.1
ENST00000611174.4
CDS CCA 90 bp AATTTGTTTCTTTTTAGAAGCTGTTCCAGTCACTTTAGGAGACTTTaGAGAATTCTCACAAGTTACTTGTTTGTGAGCCTCTCTTTTAAG +
Preference number: 5 (lower is better)
Translates to: NLFLFRSCSSHFRRL*RILTSYLFVSLSFK
Trigger: CTTAAAAGAGAGGCTCACAAACAAGTAACTTGTGAGAATTCTCCAAAGTCTCCTAAAGTGACTGGAACAGCTTCTAAAAAGAAACAAATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCCATCACTAAGTTTCTaGATCACTTGTCCCAAAATA +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFPSLSF*ITCPKI
Trigger: TATTTTGGGACAAGTGATCAAGAAACTTAGTGATGG...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTTATGAAACCACCAACTaGTCCATCACTAAGTTTCTT +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLYETTN*SITKFL
Trigger: AAGAAACTTAGTGATGGACAAGTTGGTGGTTTCATA...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTGACCATCTTATACTTTaGCTCAAAGTCCATATGAAG +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLDHLIL*LKVHMK
Trigger: CTTCATATGGACTTTGAGCAAAAGTATAAGATGGTC...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp TGCTATCACCATTCTAAATTACCACAATGCATTCATTTCCTGTTCCCTTATCTTAATATCACTTTTGAGTaGGTCCCTCTCAATTTGCAA +
Preference number: 5 (lower is better)
Translates to: CYHHSKLPQCIHFLFPYLNITFE*VPLNLQ
Trigger: TTGCAAATTGAGAGGGACCAACTCAAAAGTGATATT...AAGATAAGGGAACAGGAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAAATTGTTTCTTGATGTaGTTTCAGAGACTCAAGAGC +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPNCFLM*FQRLKS
Trigger: GCTCTTGAGTCTCTGAAACAACATCAAGAAACAATT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp GCAAGAAGAAGGTATTGCTATCACCATTCTAAATTACCACAATGCATTCATTTCATTTTTAGTTCTTCTTaGGTTTGTAGGCCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: ARRRYCYHHSKLPQCIHFIFSSS*VCRPVA
Trigger: AGCTACAGGCCTACAAACCAAAGAAGAACTAAAAAT...GAAATGAATGCATTGTGGTAATTTAGAATGGTGATAGCAATACCTTCTTCTTGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000380026.8
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCAATTTTTAGTTCTTCTTaGGTTTGTAGGCCTGTAGCT +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPIFSSS*VCRPVA
Trigger: AGCTACAGGCCTACAAACCAAAGAAGAACTAAAAAT...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS-3UTR CAA 90 bp AGTGGCAAAGTAAAGACTGAATTGAAATTAAGCTGCACTACAACATCATTACCATTCATCATGACTTTCTaGAAGTCTTTTGGACAATCC +
Preference number: 5 (lower is better)
Translates to: SGKVKTELKLSCTTTSLPFIMTF*KSFGQS
Trigger: GGATTGTCCAAAAGACTTCAAGAAAGTCATGATGAA...TGGTAATGATGTTGTAGTGCAGCTTAATTTCAATTCAGTCTTTACTTTGCCACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 72 bp CCGCCATCCTATCAGGCTGAACTGGTCCCAGGAAAATaGCCAGGACCCTCCGCGGCCGGCACTTCAGGGCTC +
Preference number: 6 (lower is better)
Translates to: PPSYQAELVPGK*PGPSAAGTSGL
Trigger: GAGCCCTGAAGTGCCGGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS CCA 72 bp CACGGCTCCTTCCTCCGCCATCCTATCAGGCTGAACTaGTCCCAGGAAAATGGCCAGGACCCTCCGCGGCCG +
Preference number: 6 (lower is better)
Translates to: HGSFLRHPIRLN*SQENGQDPPRP
Trigger: CGGCCGCGGAGGGTCCTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGCGGAGGAAGGAGCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp ACGGCCACGGCTCCTTCCTCCGCCATCCTATCAGGCTaGACTGGTCCCAGGAAAATGGCCAGGACCCTCCGC +
Preference number: 6 (lower is better)
Translates to: TATAPSSAILSG*TGPRKMARTLR
Trigger: GCGGAGGGTCCTGGCCATTTTCCTGGGACCAGTTCAGCCTGATAGGATGGCGGAGGAAGGAGCCGTGGCCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp TCCAAAAGTTGGGCCAATTGGTCTTTTTCCATTGCCTaGGCCCGCGTCTCTAAAGAAACCTCCTCTAATTGT +
Preference number: 6 (lower is better)
Translates to: SKSWANWSFSIA*ARVSKETSSNC
Trigger: ACAATTAGAGGAGGTTTCTTTAGAGACGCGGGCTCAGGCAATGGAAAAAGACCAATTGGCCCAACTTTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000509120.2
ENST00000611174.4
CDS TCA 72 bp CTCCTTCAGCTCCAGATTTTCACTTCTAAGAAAGGCTaGTTCTCTCTTGGCATCAAGGGCTACAGTTTCAGC +
Preference number: 6 (lower is better)
Translates to: LLQLQIFTSKKG*FSLGIKGYSFS
Trigger: GCTGAAACTGTAGCCCTTGATGCCAAGAGAGAATCAGCCTTTCTTAGAAGTGAAAATCTGGAGCTGAAGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp TTTCTTCCAAAAGTTGGGCCAATTGGTCTTTTTCCATaGCCTGAGCCCGCGTCTCTAAAGAAACCTCCTCTA +
Preference number: 6 (lower is better)
Translates to: FLPKVGPIGLFP*PEPASLKKPPL
Trigger: TAGAGGAGGTTTCTTTAGAGACGCGGGCTCAGGCAATGGAAAAAGACCAATTGGCCCAACTTTTGGAAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000509120.2
ENST00000611174.4
CDS CAA 72 bp ATCTCTAGCTTTGGTTTCTTGCAGGCTTTCCTTGAGTaGGTCTCTCTCCAGTTTGAGTGTCTCCTCTACTCT +
Preference number: 6 (lower is better)
Translates to: ISSFGFLQAFLE*VSLQFECLLYS
Trigger: AGAGTAGAGGAGACACTCAAACTGGAGAGAGACCAACTCAAGGAAAGCCTGCAAGAAACCAAAGCTAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp CTCCTGCATTTTGCACCTCTGGACAAAGGCCTAAACTaGAGTTATCAAAATAGCGAACTGGATGAGGTGATG +
Preference number: 6 (lower is better)
Translates to: LLHFAPLDKGLN*SYQNSELDEVM
Trigger: CATCACCTCATCCAGTTCGCTATTTTGATAACTCAAGTTTAGGCCTTTGTCCAGAGGTGCAAAATGCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp CTGCCACCTCCACAAGTTAAGGGTTTATTTGAAGGCTaGGGATCAGTATGTTCTGATATCACTGAGGTATCT +
Preference number: 6 (lower is better)
Translates to: LPPPQVKGLFEG*GSVCSDITEVS
Trigger: AGATACCTCAGTGATATCAGAACATACTGATCCTCAGCCTTCAAATAAACCCTTAACTTGTGGAGGTGGCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 90 bp AACCTGAGCCTTTCCATTTCTATTCTTGCCAGTGTTGTTGAGTCCTaGGTTGTGGACTGTTCTGTTAATAACTCCAGTTCATTCATTGTT +
Preference number: 6 (lower is better)
Translates to: NLSLSISILASVVES*VVDCSVNNSSSFIV
Trigger: AACAATGAATGAACTGGAGTTATTAACAGAACAGTCCACAACCAAGGACTCAACAACACTGGCAAGAATAGAAATGGAAAGGCTCAGGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp GGAGACTTTGGAGAATTCTCACAAGTTACTTGTTTGTaGGCCTCTCTTTTAAGGGTTCTTTCCTTCCAAGTT +
Preference number: 6 (lower is better)
Translates to: GDFGEFSQVTCL*ASLLRVLSFQV
Trigger: AACTTGGAAGGAAAGAACCCTTAAAAGAGAGGCTCACAAACAAGTAACTTGTGAGAATTCTCCAAAGTCTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp TCTTTTATGTTTTCTTTGAGCTGGTCACTTTCAGATTaGAGAACTTCTTGCAGCCTCTGTAGGTCATCTTTC +
Preference number: 6 (lower is better)
Translates to: SFMFSLSWSLSD*RTSCSLCRSSF
Trigger: GAAAGATGACCTACAGAGGCTGCAAGAAGTTCTTCAATCTGAAAGTGACCAGCTCAAAGAAAACATAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp TTCTCTGTGGTTAACTGTGTAGCTCTTGATGTAACATaGGGATTCTTATTGTCTTGTGTGGTAGGATTAACC +
Preference number: 6 (lower is better)
Translates to: FSVVNCVALDVT*GFLLSCVVGLT
Trigger: GGTTAATCCTACCACACAAGACAATAAGAATCCTCATGTTACATCAAGAGCTACACAGTTAACCACAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS GCA 72 bp ACCATTGTAGCCTTGTATGGCAGAATCGATGATTGGTaGTGCTATTTCTTCATACACATTTTTGGTAGTTTC +
Preference number: 6 (lower is better)
Translates to: TIVALYGRIDDW*CYFFIHIFGSF
Trigger: GAAACTACCAAAAATGTGTATGAAGAAATAGCAGCACCAATCATCGATTCTGCCATACAAGGCTACAATGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000514974.1
ENST00000611174.4
CDS CAA 72 bp CAGTTTCAGCATCAAACAGAGTCTGCTTCATTTGTTTaGGGTCTTCAATGCTTTCCAATGAGTATGACAAGT +
Preference number: 6 (lower is better)
Translates to: QFQHQTESASFV*GLQCFPMSMTS
Trigger: ACTTGTCATACTCATTGGAAAGCATTGAAGACCCAAAACAAATGAAGCAGACTCTGTTTGATGCTGAAACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp TCCCTTAAGGTTGCTATGAATTGGTCCCTTTCCATTTaGAGAGATTCTTTTATCCTCCTTAGCTCATCTCTT +
Preference number: 6 (lower is better)
Translates to: SLKVAMNWSLSI*RDSFILLSSSL
Trigger: AAGAGATGAGCTAAGGAGGATAAAAGAATCTCTCAAAATGGAAAGGGACCAATTCATAGCAACCTTAAGGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000265148.9
ENST00000611174.4
CDS CAA 90 bp GTAAGAAAGCTCGGTCTTCAAAGCACCCAAACTCGAATCAAATTTTaGGGCTTCTTTAGAGAGATTAACTATTTCCTGATTCATTCTCTC +
Preference number: 6 (lower is better)
Translates to: VRKLGLQSTQTRIKF*GFFREINYFLIHSL
Trigger: GAGAGAATGAATCAGGAAATAGTTAATCTCTCTAAAGAAGCCCAAAAATTTGATTCGAGTTTGGGTGCTTTGAAGACCGAGCTTTCTTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 90 bp TTTTCATTTTTCTCTTTCAGTGATTTCAGGTCCTGTTCCCACTCTTaGGATATGGTAGCACTTCTTTCCTCAAACTCTGTTGATTCATTC +
Preference number: 6 (lower is better)
Translates to: FSFFSFSDFRSCSHS*DMVALLSSNSVDSF
Trigger: GAATGAATCAACAGAGTTTGAGGAAAGAAGTGCTACCATATCCAAAGAGTGGGAACAGGACCTGAAATCACTGAAAGAGAAAAATGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS TCA 72 bp TTTGGCACAGGATCTTGTAAATTCCGTTCCTTGCATTaGGAGGGTGTAATTTGTTTCTTTTTAGAAGCTGTT +
Preference number: 6 (lower is better)
Translates to: FGTGSCKFRSLH*EGVICFFLEAV
Trigger: AACAGCTTCTAAAAAGAAACAAATTACACCCTCTCAATGCAAGGAACGGAATTTACAAGATCCTGTGCCAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp CTCGGTCTTCAAAGCACCCAAACTCGAATCAAATTTTaGGGCTTCTTTAGAGAGATTAACTATTTCCTGATT +
Preference number: 6 (lower is better)
Translates to: LGLQSTQTRIKF*GFFREINYFLI
Trigger: AATCAGGAAATAGTTAATCTCTCTAAAGAAGCCCAAAAATTTGATTCGAGTTTGGGTGCTTTGAAGACCGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp ATTCATGTTAACAGTATCGTGAATATCACTTTTGAGTaGGTCCCTCTCAATTTGCAAGCTTTCTTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: IHVNSIVNITFE*VPLNLQAFLEL
Trigger: CAACTCCAAGAAAGCTTGCAAATTGAGAGGGACCAACTCAAAAGTGATATTCACGATACTGTTAACATGAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 90 bp TTCCTGATTCATTCTCTCATTCTCCTCAAGGACCATCTTATACTTTaGCTCAAAGTCCATATGAAGGGTTTTGAAATTTTGGAATTCTTG +
Preference number: 6 (lower is better)
Translates to: FLIHSLILLKDHLIL*LKVHMKGFEILEFL
Trigger: CAAGAATTCCAAAATTTCAAAACCCTTCATATGGACTTTGAGCAAAAGTATAAGATGGTCCTTGAGGAGAATGAGAGAATGAATCAGGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS GCA 72 bp TTCTCAGTAATCAGTGTTTTCTCCCTTTCTACAGTTTaGAGCGTAGAATCTCTATTTTCTAATTGTTCCTTC +
Preference number: 6 (lower is better)
Translates to: FSVISVFSLSTV*SVESLFSNCSF
Trigger: GAAGGAACAATTAGAAAATAGAGATTCTACGCTGCAAACTGTAGAAAGGGAGAAAACACTGATTACTGAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 72 bp AAACTGGAGAGCAGTAAGTGTTTCATCAAAAGATACTaGAGTAATTGTGCAGATAATACGTGTCTTTGCATT +
Preference number: 6 (lower is better)
Translates to: KLESSKCFIKRY*SNCADNTCLCI
Trigger: AATGCAAAGACACGTATTATCTGCACAATTACTCCAGTATCTTTTGATGAAACACTTACTGCTCTCCAGTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp CATTCTCTCATTCTCCTCAAGGACCATCTTATACTTTaGCTCAAAGTCCATATGAAGGGTTTTGAAATTTTG +
Preference number: 6 (lower is better)
Translates to: HSLILLKDHLIL*LKVHMKGFEIL
Trigger: CAAAATTTCAAAACCCTTCATATGGACTTTGAGCAAAAGTATAAGATGGTCCTTGAGGAGAATGAGAGAATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp CTCCTTAGCTACAGATTTCATTTCATCATGACTTTCTaGAAGTCTTTTGGACAATCCGAGCATTTCTATTTC +
Preference number: 6 (lower is better)
Translates to: LLSYRFHFIMTF*KSFGQSEHFYF
Trigger: GAAATAGAAATGCTCGGATTGTCCAAAAGACTTCAAGAAAGTCATGATGAAATGAAATCTGTAGCTAAGGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CCA 72 bp TCTTTGAGAATTTCCTCAATATGTAGATCCATATTCTaGTTCAATTTGAGATCCCTTAATTCTCTGGATGGT +
Preference number: 6 (lower is better)
Translates to: SLRISSICRSIF*FNLRSLNSLDG
Trigger: ACCATCCAGAGAATTAAGGGATCTCAAATTGAACCAGAATATGGATCTACATATTGAGGAAATTCTCAAAGA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4
CDS CAA 72 bp ATTTCCTCAATATGTAGATCCATATTCTGGTTCAATTaGAGATCCCTTAATTCTCTGGATGGTACATCACAA +
Preference number: 6 (lower is better)
Translates to: ISSICRSIFWFN*RSLNSLDGTSQ
Trigger: TTGTGATGTACCATCCAGAGAATTAAGGGATCTCAAATTGAACCAGAATATGGATCTACATATTGAGGAAAT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000265148.9
ENST00000380026.8
ENST00000611174.4