Pregenerated sensors for CENPC (Homo sapiens)
Ensembl gene IDs: ENSG00000145241Ensembl transcript IDs: ENST00000273853.11, ENST00000506882.5, ENST00000515140.1
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCTGCCCCATGGCAAGTACTCCATATACATTTCTTCATATATATaGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCA | + |
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Preference number: 1 (lower is better) Translates to: FLPHGKYSIYISSYI*KGNSVTRTTGRLGA Trigger: TGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATGAAGAAATGTATATGGAGTACTTGCCATGGGGCAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| 3UTR CCA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTaGGGGCAGGTCAAGTTGTTCTTCTTAACTTCAGACTTCAGTTTC | + |
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Preference number: 1 (lower is better) Translates to: HIYGRATVSHVRQAG*GQVKLFFLTSDFSF Trigger: GAAACTGAAGTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| 3UTR TCA 90 bp | GCTGCAAATGTGCAGAGCAAAATTCTGAGACATGACAGAAGCCTATaGGCTGAACAGAGTACAGAGGTGGCAAAAATCAGACGTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: AANVQSKILRHDRSL*AEQSTEVAKIRRGS Trigger: AGAGCCACGTCTGATTTTTGCCACCTCTGTACTCTGTTCAGCTCATAGGCTTCTGTCATGTCTCAGAATTTTGCTCTGCACATTTGCAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 90 bp | AACAGTTGGCTGAACAGTAGGCTGCAAATGTGCAGAGCAAAATTCTaGGACATGACAGAAGCCTATGAGCTGAACAGAGTACAGAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: NSWLNSRLQMCRAKF*DMTEAYELNRVQRW Trigger: CCACCTCTGTACTCTGTTCAGCTCATAGGCTTCTGTCATGTCTCAGAATTTTGCTCTGCACATTTGCAGCCTACTGTTCAGCCAACTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR CCA 90 bp | ACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTaGAAGGCTTATAGACTCAAGTGTTTGATCTTAACCTTTGTCCAA | + |
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Preference number: 1 (lower is better) Translates to: TMNASPIPHRTTNSG*KAYRLKCLILTFVQ Trigger: TTGGACAAAGGTTAAGATCAAACACTTGAGTCTATAAGCCTTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 90 bp | GAAAAGGGTAACATGAGCTCTCCAAACATCTTTGGCAAACTGAAATaGTGCATGCACAGGGGAGACTCAAGAGAGCATGGCAAATGTAAA | + |
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Preference number: 1 (lower is better) Translates to: EKGNMSSPNIFGKLK*CMHRGDSREHGKCK Trigger: TTTACATTTGCCATGCTCTCTTGAGTCTCCCCTGTGCATGCATCATTTCAGTTTGCCAAAGATGTTTGGAGAGCTCATGTTACCCTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 90 bp | TATAGACTCAAGTGTTTGATCTTAACCTTTGTCCAAATGATTGGCTaGCTGCTAAGCTATGCAGACACAGGAACTACCCCTAGCAAGCAA | + |
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Preference number: 1 (lower is better) Translates to: YRLKCLILTFVQMIG*LLSYADTGTTPSKQ Trigger: TTGCTTGCTAGGGGTAGTTCCTGTGTCTGCATAGCTTAGCAGTCAGCCAATCATTTGGACAAAGGTTAAGATCAAACACTTGAGTCTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 90 bp | CTATTGATAGGTATAACTGCTTGGATGATCTTAAGGGCTTTATGCTaGGTGAGAAAAACCAAAGGTCATACACTATATTATTCCATTGCT | + |
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Preference number: 1 (lower is better) Translates to: LLIGITAWMILRALC*VRKTKGHTLYYSIA Trigger: AGCAATGGAATAATATAGTGTATGACCTTTGGTTTTTCTCACTCAGCATAAAGCCCTTAAGATCATCCAAGCAGTTATACCTATCAATAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR GCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCGCAAGTAGATTGAAATaGTACCGGTGCAAGCCAAGG | + |
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Preference number: 2 (lower is better) Translates to: HARVEVSFFKTLHEHEGCASRLK*YRCKPR Trigger: CCTTGGCTTGCACCGGTAGCATTTCAATCTACTTGC...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR GCA 90 bp | TCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTGGAACTGACTGCTAAGCTATaGAGACACAGGAACTACCCC | + |
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Preference number: 2 (lower is better) Translates to: SYNECIPHPTQNNQQWVELTAKL*RHRNYP Trigger: GGGGTAGTTCCTGTGTCTGCATAGCTTAGCAGTCAG...TTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR CAA 90 bp | GCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGGTCAAGTaGTTCTTCTTAACTTCAGACTTCAGTTTCTTCTTCCATCAGATG | + |
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Preference number: 2 (lower is better) Translates to: ATVSHVRQAGWGQVK*FFLTSDFSFFFHQM Trigger: CATCTGATGGAAGAAGAAACTGAAGTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCGCAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSRRRIA*TREVEV Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR GCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCTGACGCAGGAGAATTaGTTGAACCCGGGAGGTGGA | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSLTQEN*LNPGGG Trigger: TCCACCTCCCGGGTTCAAGCAATTCTCCTGCGTCAG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCAGCCTCTGAGTAGCTaGGATTACAGGCACCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSQPLSS*DYRHLP Trigger: TGGCAGGTGCCTGTAATCCCAGCTACTCAGAGGCTG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCAACTGCCTCCTACAATaGATGCATCCCCCATCCCAC | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSNCLLQ*MHPPSH Trigger: GTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCAATCAGACGTGGCTCTaGCCAAGCAGAATGGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSNQTWL*PSRMES Trigger: GCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCAGAAGCCTATGAGCTaGACAGAGTACAGAGGTGGC | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSQKPMS*TEYRGG Trigger: GCCACCTCTGTACTCTGTTCAGCTCATAGGCTTCTG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR GCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACGTGCAAGCCAAGGAATaGCAGAAATTGCCAGTAAAC | + |
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Preference number: 2 (lower is better) Translates to: NLGTASYNECIPHPTQNNVQAKE*QKLPVN Trigger: GTTTACTGGCAATTTCTGGCATTCCTTGGCTTGCAC...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCACTAGCCAGGCGTGGTaGCAAGCAACTGTAATCCCA | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSTSQAW*QATVIP Trigger: TGGGATTACAGTTGCTTGCCACCACGCCTGGCTAGT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTTTAAAAAGGGAAAGTTaGGGCCACATACAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFLKRES*GHIQKA Trigger: TGCTTTCTGTATGTGGCCTCAACTTTCCCTTTTTAA...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | TCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTGGAATGGTTAAATAAGACCTaGAAAGGGAGTTGGCCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SYNECIPHPTQNNQQWVEWLNKT*KGSWPK Trigger: TTTAGGCCAACTCCCTTTTCAGGTCTTATTTAACCA...TTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGGCTGGGGGCAGGTCAAGTTGTTCTTCTTAACTTCAGACTTCAGTTTCTTTCGACTCCCAGCTTaGTCAAAAATCCAACATCTA | + |
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Preference number: 2 (lower is better) Translates to: QAGWGQVKLFFLTSDFSFFRLPA*SKIQHL Trigger: TAGATGTTGGATTTTTGATCAAGCTGGGAGTCGAAA...GAAACTGAAGTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCAGCCTGCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| 3UTR-3UTR GCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCAGTCACCCAGTTTTATaGCTGGGGGCACTCTCCAAA | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSSHPVL*LGALSK Trigger: TTTGGAGAGTGCCCCCAGGCATAAAACTGGGTGACT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR CAA 90 bp | ACACAGACACACAAGGTGAGAATACCATGTGATAATGCAAGTAGATaGAAATGCTACCGGTGCAAGCCAAGGAATGCCAGAAATTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: TQTHKVRIPCDNASR*KCYRCKPRNARNCQ Trigger: CTGGCAATTTCTGGCATTCCTTGGCTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTTGTGTGTCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR GCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCGTCCTACACCAGAGTTaGTTTAAATGTGTGTATTTA | + |
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Preference number: 2 (lower is better) Translates to: HARVEVSFFKTLHEHEGCVLHQS*FKCVYL Trigger: TAAATACACACATTTAAAGCAACTCTGGTGTAGGAC...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCAGTTGGCTGAACAGTTaGCTGAACAGTAGGCTGCAA | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSSWLNS*LNSRLQ Trigger: TTGCAGCCTACTGTTCAGCCAACTGTTCAGCCAACT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGGCCTTGACAACACCTTaGTTTCAGACTTCTAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: KVRIPCDNASRLKCYRCKALTTP*FQTSSL Trigger: GAGGCTAGAAGTCTGAAATCAAGGTGTTGTCAAGGC...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCAACAGAGTACAGAGGTaGCAAAAATCAGACGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSNRVQR*QKSDVA Trigger: AGCCACGTCTGATTTTTGCCACCTCTGTACTCTGTT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCATAATGCAAGTAGATTaGAATGCTACCGGTGCAAGC | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSIMQVD*NATGAS Trigger: GCTTGCACCGGTAGCATTTCAATCTACTTGCATTAT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCACAGACACACAAGGTaGGAATACCATGTGATAATG | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSHRHTR*EYHVIM Trigger: CATTATCACATGGTATTCTCACCTTGTGTGTCTGTG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCATGGGCCCAGATACTTaGTTAGTCAAGCCTTCAATA | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSMGPDT*LVKPSI Trigger: TATTGAAGGCTTGACTAATCAAGTATCTGGGCCCAT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCAGAAAAGGGTAACATaGGCTCTCCAAACATCTTTG | + |
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Preference number: 2 (lower is better) Translates to: DTCIHVVSKWTTNCGILSQKRVT*ALQTSL Trigger: CAAAGATGTTTGGAGAGCTCATGTTACCCTTTTCTG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTCCCTGGCCAACATGGTaGAAATCTGTCTCTACTAAA | + |
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Preference number: 2 (lower is better) Translates to: TVVLMGTERSQFRAVEKTPWPTW*KSVSTK Trigger: TTTAGTAGAGACAGATTTTCACCATGTTGGCCAGGG...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTAAACCAAGGGGAATTTaGGAACTGCCTCCTACAATG | + |
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Preference number: 2 (lower is better) Translates to: TVVLMGTERSQFRAVEKTKPRGI*ELPPTM Trigger: CATTGTAGGAGGCAGTTCCCAAATTCCCCTTGGTTT...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR CCA 72 bp | GGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTaGGGGCAGGTCAAGTTGTTCTTCTTAACTTCAGAC | + |
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Preference number: 3 (lower is better) Translates to: GRATVSHVRQAG*GQVKLFFLTSD Trigger: GTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| 3UTR GCA 72 bp | ACCAAGGGGAATTTGGGAACTGCCTCCTACAATGAATaGATCCCCCATCCCACACAGAACAACCAACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: TKGNLGTASYNE*IPHPTQNNQQW Trigger: CCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATTCCCCTTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CAA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGTTTTCGACTCCCAGCTaGATCAAAAATCCAACATCT | + |
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Preference number: 3 (lower is better) Translates to: HIYGRATVSHVRQAGWGQFSTPS*IKNPTS Trigger: AGATGTTGGATTTTTGATCAAGCTGGGAGTCGAAAA...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| 3UTR-3UTR CAA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCTATGGGCCCAGATACTaGATTAGTCAAGCCTTCAAT | + |
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Preference number: 3 (lower is better) Translates to: HARVEVSFFKTLHEHEGCYGPRY*ISQAFN Trigger: ATTGAAGGCTTGACTAATCAAGTATCTGGGCCCATA...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR CCA 72 bp | ATGACAGAAGCCTATGAGCTGAACAGAGTACAGAGGTaGCAAAAATCAGACGTGGCTCTGACCAAGCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: MTEAYELNRVQR*QKSDVALTKQN Trigger: ATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGTACTCTGTTCAGCTCATAGGCTTCTGTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTATTAAAAAGGGAAAGTaGAGGCCACATACAGAAAGC | + |
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Preference number: 3 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFIKKGK*RPHTES Trigger: GCTTTCTGTATGTGGCCTCAACTTTCCCTTTTTAAT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 72 bp | GTGCAGAGCAAAATTCTGAGACATGACAGAAGCCTATaGGCTGAACAGAGTACAGAGGTGGCAAAAATCAGA | + |
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Preference number: 3 (lower is better) Translates to: VQSKILRHDRSL*AEQSTEVAKIR Trigger: TCTGATTTTTGCCACCTCTGTACTCTGTTCAGCTCATAGGCTTCTGTCATGTCTCAGAATTTTGCTCTGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR-3UTR CAA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCAAAACCAAGGGGAATTaGGGAACTGCCTCCTACAAT | + |
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Preference number: 3 (lower is better) Translates to: DTCIHVVSKWTTNCGILSKTKGN*GTASYN Trigger: ATTGTAGGAGGCAGTTCCCAAATTCCCCTTGGTTTT...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 72 bp | AAGTGTTTGATCTTAACCTTTGTCCAAATGATTGGCTaGCTGCTAAGCTATGCAGACACAGGAACTACCCCT | + |
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Preference number: 3 (lower is better) Translates to: KCLILTFVQMIG*LLSYADTGTTP Trigger: AGGGGTAGTTCCTGTGTCTGCATAGCTTAGCAGTCAGCCAATCATTTGGACAAAGGTTAAGATCAAACACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR GCA 72 bp | GTGAGAATACCATGTGATAATGCAAGTAGATTGAAATaGTACCGGTGCAAGCCAAGGAATGCCAGAAATTGC | + |
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Preference number: 3 (lower is better) Translates to: VRIPCDNASRLK*YRCKPRNARNC Trigger: GCAATTTCTGGCATTCCTTGGCTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| 3UTR TCA 72 bp | GGTATAACTGCTTGGATGATCTTAAGGGCTTTATGCTaGGTGAGAAAAACCAAAGGTCATACACTATATTAT | + |
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Preference number: 3 (lower is better) Translates to: GITAWMILRALC*VRKTKGHTLYY Trigger: ATAATATAGTGTATGACCTTTGGTTTTTCTCACTCAGCATAAAGCCCTTAAGATCATCCAAGCAGTTATACC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTTCGGGAGGACACGAATaGGGTGGAGCAGTTGCCGCA | + |
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Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFSGGHE*GGAVAA Trigger: TGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGA...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCAGGTGGAGGTTGCAGTaGGCCGAGATCACACCATCG | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCRWRLQ*AEITPS Trigger: CGATGGTGTGATCTCGGCTCACTGCAACCTCCACCT...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGTTCATGGGCCTGAACTaGTCTGTTTGTGGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: HIYGRATVSHVRQAGWGQFMGLN*SVCGFT Trigger: AGTGAAGCCACAAACAGATCAGTTCAGGCCCATGAA...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR TCA 90 bp | TCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTGGAAAGCATGAGGGCTGCCTaGCAAAGTAGGCAGGACTGT | + |
|
Preference number: 4 (lower is better) Translates to: SYNECIPHPTQNNQQWVESMRAA*QSRQDC Trigger: ACAGTCCTGCCTACTTTGTCAGGCAGCCCTCATGCT...TTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTCTGACGCAGGAGAATTaGTTGAACCCGGGAGGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFLTQEN*LNPGGG Trigger: TCCACCTCCCGGGTTCAAGCAATTCTCCTGCGTCAG...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTAATCAGACGTGGCTCTaGCCAAGCAGAATGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFNQTWL*PSRMES Trigger: GCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGTGTGTTAATGTCACGTaGCCTGGAAGGTCGACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: HIYGRATVSHVRQAGWGQCVNVT*PGRSTK Trigger: TTTTGTCGACCTTCCAGGGCACGTGACATTAACACA...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGCTGGGGGCAGGTCAAGTTGTTCTTCTTAACTTCAGACTTCAGTTTCACAGGACCTCATTCCTaGCCCATGGCAAGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGWGQVKLFFLTSDFSFTGPHS*PMASTP Trigger: TGGAGTACTTGCCATGGGGCAGGAATGAGGTCCTGT...GAAACTGAAGTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCAGCCTGCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR CCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAGCCTCTGAGTAGCTaGGATTACAGGCACCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNQPLSS*DYRHLP Trigger: TGGCAGGTGCCTGTAATCCCAGCTACTCAGAGGCTG...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | ATACATTTCTTCATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGTCGGGAGGACACGAATaGGGTGGAGCAGTTGCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: IHFFIYMEGQQCHTYDRQSGGHE*GGAVAA Trigger: TGCGGCAACTGCTCCACCTCATTCGTGTCCTCCCGA...CTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATGAAGAAATGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR TCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACAACTGCCTCCTACAATaGATGCATCCCCCATCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNNCLLQ*MHPPSH Trigger: GTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTT...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACGGAGCAGTTGCCGCATaGCTAACAATGGGACTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNGAVAA*LTMGLD Trigger: ATCCAGTCCCATTGTTAGGCATGCGGCAACTGCTCC...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTCTGACTGCTAAGCTATaGAGACACAGGAACTACCCC | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFLTAKL*RHRNYP Trigger: GGGGTAGTTCCTGTGTCTGCATAGCTTAGCAGTCAG...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGTTTGGATGTGATTTCTaGCACTCTTTGCTTGGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: HIYGRATVSHVRQAGWGQFGCDF*HSLLGD Trigger: GTCACCAAGCAAAGAGTGCCAGAAATCACATCCAAA...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR CCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCTCTGACCAAGCAGAATaGAGAGCCTTTGCTGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCSDQAE*RAFAEP Trigger: TGGTTCAGCAAAGGCTCTCCATTCTGCTTGGTCAGA...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | TCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTGGAATTCATGGGCCTGAACTaGTCTGTTTGTGGCTTCACT | + |
|
Preference number: 4 (lower is better) Translates to: SYNECIPHPTQNNQQWVEFMGLN*SVCGFT Trigger: AGTGAAGCCACAAACAGATCAGTTCAGGCCCATGAA...TTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTGCCTTGACAACACCTTaGTTTCAGACTTCTAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFALTTP*FQTSSL Trigger: GAGGCTAGAAGTCTGAAATCAAGGTGTTGTCAAGGC...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCACATCTTTGGCAAACTaGAATGATGCATGCACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCTSLAN*NDACTG Trigger: CCCTGTGCATGCATCATTTCAGTTTGCCAAAGATGT...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTAGTTGGCTGAACAGTTaGCTGAACAGTAGGCTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFSWLNS*LNSRLQ Trigger: TTGCAGCCTACTGTTCAGCCAACTGTTCAGCCAACT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCTATAGCCCTAGAAGTTaGCTGAACAGTTGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCYSPRS*LNSWLN Trigger: GTTCAGCCAACTGTTCAGCCAACTTCTAGGGCTATA...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | ATACATTTCTTCATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGTACGACAGGCAGGCTaGGGGCAGGTCAAGTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IHFFIYMEGQQCHTYDRQVRQAG*GQVKLF Trigger: GAACAACTTGACCTGCCCCCAGCCTGCCTGTCGTAC...CTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATGAAGAAATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTAATCACGAATCCTCCTaGTGGCCTTCCTTGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFNHESS*WPSLII Trigger: GATTATCAAGGAAGGCCATCAGGAGGATTCGTGATT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCCACAGACACACAAGGTaGGAATACCATGTGATAATG | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCHRHTR*EYHVIM Trigger: CATTATCACATGGTATTCTCACCTTGTGTGTCTGTG...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCATGGGCCCAGATACTTaGTTAGTCAAGCCTTCAATA | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCMGPDT*LVKPSI Trigger: TATTGAAGGCTTGACTAATCAAGTATCTGGGCCCAT...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGCGCAGGAGAATTGCTTaGACCCGGGAGGTGGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKRRRIA*TREVEV Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCTCCTGCG...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTGTGCAAGCCAAGGAATaGCAGAAATTGCCAGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFVQAKE*QKLPVN Trigger: GTTTACTGGCAATTTCTGGCATTCCTTGGCTTGCAC...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACGCAAGTAGATTGAAATaGTACCGGTGCAAGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNASRLK*YRCKPR Trigger: CCTTGGCTTGCACCGGTAGCATTTCAATCTACTTGC...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTAGAGTCTTGCTCGGCTaGCCAGCCTGGAGTGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TVVLMGTERSQFRAVEKTRVLLG*PAWSAV Trigger: AACTGCACTCCAGGCTGGGCAGCCGAGCAAGACTCT...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCTTTGAGTCAGAGTCTTaGTCGGCTGCCCAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DTCIHVVSKWTTNCGILSFESES*SAAQPG Trigger: TCCAGGCTGGGCAGCCGAGCAAGACTCTGACTCAAA...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACACATACAGAAAGCAATaGCGAAGGACACTGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNTYRKQ*RRTLPP Trigger: TGGAGGCAGTGTCCTTCGCCATTGCTTTCTGTATGT...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTAAACCAAGGGGAATTTaGGAACTGCCTCCTACAATG | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFKPRGI*ELPPTM Trigger: CATTGTAGGAGGCAGTTCCCAAATTCCCCTTGGTTT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTAACAGAGTACAGAGGTaGCAAAAATCAGACGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFNRVQR*QKSDVA Trigger: AGCCACGTCTGATTTTTGCCACCTCTGTACTCTGTT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGATTTCTTCATATATATaGAAGGGCAACAGTGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: HIYGRATVSHVRQAGWGQISSYI*KGNSVT Trigger: TGTGACACTGTTGCCCTTCCATATATATGAAGAAAT...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| 3UTR CAA 72 bp | TCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTaGCTGAACCATATGGGCTTTCAGTTTAGACAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SDVALTKQNGEP*LNHMGFQFRQR Trigger: TCTTTGTCTAAACTGAAAGCCCATATGGTTCAGCAAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGCAGAAGCCTATGAGCTaGACAGAGTACAGAGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKQKPMS*TEYRGG Trigger: GCCACCTCTGTACTCTGTTCAGCTCATAGGCTTCTG...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACGTGCTACTAAGCACTTaGAATGTGGCAAATGCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNVLLST*NVANAS Trigger: ACTTGCATTTGCCACATTTCAAGTGCTTAGTAGCAC...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACAAGTGGAAACTCCACTaGAAAAGAGCTCCAGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNKWKLH*KRAPEI Trigger: GATTTCTGGAGCTCTTTTTCAGTGGAGTTTCCACTT...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | TCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTGGAATTAAGGGCTTTATGCTaGGTGAGAAAAACCAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SYNECIPHPTQNNQQWVELRALC*VRKTKG Trigger: ACCTTTGGTTTTTCTCACTCAGCATAAAGCCCTTAA...TTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCAATGGGTATCAAATTTaGCCTCCTCCAACAAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCNGYQI*PPPTNF Trigger: AAAGTTTGTTGGAGGAGGGCAAATTTGATACCCATT...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCCTCTCCAAACATCTTTaGCAAACTGAAATGATGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HARVEVSFFKTLHEHEGCLSKHL*QTEMMH Trigger: ATGCATCATTTCAGTTTGCCAAAGATGTTTGGAGAG...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTACTAGCCAGGCGTGGTaGCAAGCAACTGTAATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVVLMGTERSQFRAVEKTTSQAW*QATVIP Trigger: TGGGATTACAGTTGCTTGCCACCACGCCTGGCTAGT...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACTTAAAAAGGGAAAGTTaGGGCCACATACAGAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NLGTASYNECIPHPTQNNLKRES*GHIQKA Trigger: TGCTTTCTGTATGTGGCCTCAACTTTCCCTTTTTAA...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTAATAGCTACAACTTGTaGCTACTGTATCAGCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFNSYNL*LLYQPL Trigger: TAATGGCTGATACAGTAGTCACAAGTTGTAGCTATT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGAGTCACCCAGTTTTATaGCTGGGGGCACTCTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKSHPVL*LGALSK Trigger: TTTGGAGAGTGCCCCCAGGCATAAAACTGGGTGACT...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTATTGATAGGTATAACTaGTTGGATGATCTTAAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFIDRYN*LDDLKG Trigger: GCCCTTAAGATCATCCAAGCAGTTATACCTATCAAT...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
||
| CDS-3UTR TCA 90 bp | ATACATTTCTTCATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGAATCACGAATCCTCCTaGTGGCCTTCCTTGATAATC | + |
|
Preference number: 4 (lower is better) Translates to: IHFFIYMEGQQCHTYDRQNHESS*WPSLII Trigger: GATTATCAAGGAAGGCCATCAGGAGGATTCGTGATT...CTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATGAAGAAATGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506882.5 |
||
| CDS-3UTR TCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGCATGACAGAAGCCTATaGGCTGAACAGAGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKHDRSL*AEQSTE Trigger: CTCTGTACTCTGTTCAGCTCATAGGCTTCTGTCATG...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCGAGAAAACTGAATTGTaGTGCAGGGTACAGAAGTGG | + |
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Preference number: 4 (lower is better) Translates to: DTCIHVVSKWTTNCGILSEKTEL*CRVQKW Trigger: CCACTTCTGTACCCTGCATCACAATTCAGTTTTCTC...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR GCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCTGTGTTAATGTCACGTaGCCTGGAAGGTCGACAAAA | + |
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Preference number: 4 (lower is better) Translates to: DTCIHVVSKWTTNCGILSCVNVT*PGRSTK Trigger: TTTTGTCGACCTTCCAGGGCACGTGACATTAACACA...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR GCA 90 bp | ACAGAGGTGGCAAAAATCAGACGTGGCTCTGACCAAGCAGAATGGAGAGCCTTTGTCCTACACCAGAGTTaGTTTAAATGTGTGTATTTA | + |
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Preference number: 4 (lower is better) Translates to: TEVAKIRRGSDQAEWRAFVLHQS*FKCVYL Trigger: TAAATACACACATTTAAAGCAACTCTGGTGTAGGAC...AAAGGCTCTCCATTCTGCTTGGTCAGAGCCACGTCTGATTTTTGCCACCTCTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | ATGTACCAAACTGTTCTGACATCCATCAGTCATATCACACTTCATTTTGACCACAATCACGAATCCTCCTaGTGGCCTTCCTTGATAATC | + |
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Preference number: 4 (lower is better) Translates to: MYQTVLTSISHITLHFDHNHESS*WPSLII Trigger: GATTATCAAGGAAGGCCATCAGGAGGATTCGTGATT...GTGGTCAAAATGAAGTGTGATATGACTGATGGATGTCAGAACAGTTTGGTACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515140.1 |
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| CDS-3UTR TCA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCTGGTTAAATAAGACCTaGAAAGGGAGTTGGCCTAAA | + |
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Preference number: 4 (lower is better) Translates to: DTCIHVVSKWTTNCGILSWLNKT*KGSWPK Trigger: TTTAGGCCAACTCCCTTTTCAGGTCTTATTTAACCA...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTCAGAAAAGGGTAACATaGGCTCTCCAAACATCTTTG | + |
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Preference number: 4 (lower is better) Translates to: TVVLMGTERSQFRAVEKTQKRVT*ALQTSL Trigger: CAAAGATGTTTGGAGAGCTCATGTTACCCTTTTCTG...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGGGGCTTTATGCTGAGTaGGAAAAACCAAAGGTCATA | + |
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Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKGLYAE*EKPKVI Trigger: TATGACCTTTGGTTTTTCTCACTCAGCATAAAGCCC...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | ACTGTTCTGACATCCATCAGTCATATCACACTTCATTTTGACCACTGTGGCTTCTGTACCAAACTGTTCTaGCATCCATCAGTCATATCA | + |
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Preference number: 4 (lower is better) Translates to: TVLTSISHITLHFDHCGFCTKLF*HPSVIS Trigger: TGATATGACTGATGGATGTCAGAACAGTTTGGTACA...GAAGCCACAGTGGTCAAAATGAAGTGTGATATGACTGATGGATGTCAGAACAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000515140.1 |
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| CDS-3UTR GCA 90 bp | ATACATTTCTTCATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGATTTCTGGCACTCTTTaGTTGGTGACTGAATACAAG | + |
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Preference number: 4 (lower is better) Translates to: IHFFIYMEGQQCHTYDRQISGTL*LVTEYK Trigger: CTTGTATTCAGTCACCAAGCAAAGAGTGCCAGAAAT...CTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATGAAGAAATGTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| CDS-3UTR CCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTTTTGGATGTGATTTCTaGCACTCTTTGCTTGGTGAC | + |
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Preference number: 4 (lower is better) Translates to: TVVLMGTERSQFRAVEKTFGCDF*HSLLGD Trigger: GTCACCAAGCAAAGAGTGCCAGAAATCACATCCAAA...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR GCA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTATTTCTGGCACTCTTTaGTTGGTGACTGAATACAAG | + |
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Preference number: 4 (lower is better) Translates to: TVVLMGTERSQFRAVEKTISGTL*LVTEYK Trigger: CTTGTATTCAGTCACCAAGCAAAGAGTGCCAGAAAT...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR GCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGCATGCATTGTATCCTTaGCAAATTCCTGTTTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKHALYP*QIPVFC Trigger: GCAGAAAACAGGAATTTGGCAAGGATACAATGCATG...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR TCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGCTACTGGCAAAACTTTaGTCCGACTCATCAATTATA | + |
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Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKLLAKL*SDSSII Trigger: TATAATTGATGAGTCGGATCAAAGTTTTGCCAGTAG...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CCA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGCATGTGGTAAGTAAATaGACAACAAACTGTGGAATC | + |
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Preference number: 4 (lower is better) Translates to: KVRIPCDNASRLKCYRCKHVVSK*TTNCGI Trigger: GATTCCACAGTTTGTTGTCCATTTACTTACCACATG...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGCGGGGATATTGTGCGTaGTTTCAGAGACCCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: HIYGRATVSHVRQAGWGQRGYCA*FQRPCL Trigger: AAGGCAGGGTCTCTGAAACAACGCACAATATCCCCG...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| CDS-3UTR CAA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCTGCAGTTGCGTGATCTaGGCTCACTGCAACCATCAT | + |
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Preference number: 5 (lower is better) Translates to: HARVEVSFFKTLHEHEGCCSCVI*AHCNHH Trigger: ATGATGGTTGCAGTGAGCCAAGATCACGCAACTGCA...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCAAAACCAAGGGGAATTaGGGAACTGCCTCCTACAAT | + |
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Preference number: 5 (lower is better) Translates to: HARVEVSFFKTLHEHEGCKTKGN*GTASYN Trigger: ATTGTAGGAGGCAGTTCCCAAATTCCCCTTGGTTTT...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCTCACCCACCCCTAGGTaGATTGGTAAAAACTACAGT | + |
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Preference number: 5 (lower is better) Translates to: HARVEVSFFKTLHEHEGCSPTPR*IGKNYS Trigger: ACTGTAGTTTTTACCAATCAACCTAGGGGTGGGTGA...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGCTGGGGGCAGGTCAAGTTGTTCTTCTTAACTTCAGACTTCAGTTTCTGGGGGCAGGTCAAGTaGTTCTTCTTAACTTCAGAC | + |
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Preference number: 5 (lower is better) Translates to: QAGWGQVKLFFLTSDFSFWGQVK*FFLTSD Trigger: GTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCA...GAAACTGAAGTCTGAAGTTAAGAAGAACAACTTGACCTGCCCCCAGCCTGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| CDS-3UTR CAA 90 bp | CATATATATGGAAGGGCAACAGTGTCACACGTACGACAGGCAGGCTGGGGGCAGTCTACTGGCAAAACTTaGATCCGACTCATCAATTAT | + |
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Preference number: 5 (lower is better) Translates to: HIYGRATVSHVRQAGWGQSTGKT*IRLINY Trigger: ATAATTGATGAGTCGGATCAAAGTTTTGCCAGTAGA...CTGCCCCCAGCCTGCCTGTCGTACGTGTGACACTGTTGCCCTTCCATATATATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000506882.5 |
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| CDS-3UTR CAA 90 bp | AATTTGGGAACTGCCTCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAGAATGGAGAGCCTTaGCTGAACCATATGGGCTTT | + |
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Preference number: 5 (lower is better) Translates to: NLGTASYNECIPHPTQNNQNGEP*LNHMGF Trigger: AAAGCCCATATGGTTCAGCAAAGGCTCTCCATTCTG...GTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGAGGCAGTTCCCAAATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | TCCTACAATGAATGCATCCCCCATCCCACACAGAACAACCAACAGTGGGTGGAATATGGGCCCAGATACTaGATTAGTCAAGCCTTCAAT | + |
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Preference number: 5 (lower is better) Translates to: SYNECIPHPTQNNQQWVEYGPRY*ISQAFN Trigger: ATTGAAGGCTTGACTAATCAAGTATCTGGGCCCATA...TTCCACCCACTGTTGGTTGTTCTGTGTGGGATGGGGGATGCATTCATTGTAGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTCGGGGATATTGTGCGTaGTTTCAGAGACCCTGCCTT | + |
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Preference number: 5 (lower is better) Translates to: TVVLMGTERSQFRAVEKTRGYCA*FQRPCL Trigger: AAGGCAGGGTCTCTGAAACAACGCACAATATCCCCG...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCCTAGTGCTACTTTTCTaGCTTCCCACAGGTGGCATC | + |
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Preference number: 5 (lower is better) Translates to: DTCIHVVSKWTTNCGILSLVLLF*LPTGGI Trigger: GATGCCACCTGTGGGAAGCAAGAAAAGTAGCACTAG...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | CATGCCCGGGTAGAAGTCTCTTTCTTTAAGACCCTTCATGAGCATGAGGGCTGCAACTATACACATGCATaGTATCCTTGCCAAATTCCT | + |
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Preference number: 5 (lower is better) Translates to: HARVEVSFFKTLHEHEGCNYTHA*YPCQIP Trigger: AGGAATTTGGCAAGGATACAATGCATGTGTATAGTT...GCAGCCCTCATGCTCATGAAGGGTCTTAAAGAAAGAGACTTCTACCCGGGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | ACAGTGGTCTTAATGGGCACAGAAAGATCACAATTTAGGGCTGTTGAGAAAACTTTTGGAAAAGAACTGTaGGAATCTGTGGCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: TVVLMGTERSQFRAVEKTFGKEL*ESVASL Trigger: CAAGGAGGCCACAGATTCCAACAGTTCTTTTCCAAA...AGTTTTCTCAACAGCCCTAAATTGTGATCTTTCTGTGCCCATTAAGACCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCTCTACTGGCAAAACTTaGATCCGACTCATCAATTAT | + |
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Preference number: 5 (lower is better) Translates to: DTCIHVVSKWTTNCGILSSTGKT*IRLINY Trigger: ATAATTGATGAGTCGGATCAAAGTTTTGCCAGTAGA...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | AAGGTGAGAATACCATGTGATAATGCAAGTAGATTGAAATGCTACCGGTGCAAGATTAAAAAGGGAAAGTaGAGGCCACATACAGAAAGC | + |
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Preference number: 5 (lower is better) Translates to: KVRIPCDNASRLKCYRCKIKKGK*RPHTES Trigger: GCTTTCTGTATGTGGCCTCAACTTTCCCTTTTTAAT...CTTGCACCGGTAGCATTTCAATCTACTTGCATTATCACATGGTATTCTCACCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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| CDS-3UTR CAA 90 bp | GACACATGCATCCATGTGGTAAGTAAATGGACAACAAACTGTGGAATCCTATCCTCACTTCATCTTTATTaGTGGTACAGTCATCCATAC | + |
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Preference number: 5 (lower is better) Translates to: DTCIHVVSKWTTNCGILSSLHLY*WYSHPY Trigger: GTATGGATGACTGTACCACAAATAAAGATGAAGTGA...GGATAGGATTCCACAGTTTGTTGTCCATTTACTTACCACATGGATGCATGTGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000273853.11 |
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