Pregenerated sensors for CENPA (Homo sapiens)
Ensembl gene IDs: ENSG00000115163Ensembl transcript IDs: ENST00000233505.12, ENST00000335756.9, ENST00000419525.5, ENST00000460030.1, ENST00000472719.5, ENST00000475662.5
Found 123 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTCAGCCGAGTCCCTCCTCAAGGCCCCGGATCCTCCGGGCCAGTTaGACATCCTTTGGGAAGAGAGTAACTCGGCCTGCATGTAAGGTG | + |
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Preference number: 1 (lower is better) Translates to: AQPSPSSRPRILRAS*TSFGKRVTRPACKV Trigger: CACCTTACATGCAGGCCGAGTTACTCTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGATCCGGGGCCTTGAGGAGGGACTCGGCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR TCA 90 bp | AGTCCACTCAGTTACATGATGCTGCCACTAATGGTGAGGCTACTCTaGAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SPLSYMMLPLMVRLL*RAEVYMMEMPSLPG Trigger: GCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGTGGCAGCATCATGTAACTGAGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR GCA 90 bp | AGAAATGCTTCTGCTGCCTCTTGTAGGGCCAATAGGGCCTGGGCTTaGCAATTGAAGTCCACACCACGAGTGAATTTAACACATATTTCT | + |
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Preference number: 1 (lower is better) Translates to: RNASAASCRANRAWA*QLKSTPRVNLTHIS Trigger: AGAAATATGTGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGCAGCAGAAGCATTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR TCA 90 bp | AACATCAAAGCTTACAGGTTTTCTATTCATCCCCAATTAAGTTTCTaGAAAGCTACACATCCGTTGACAAGCACAGTCCACTCAGTTACA | + |
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Preference number: 1 (lower is better) Translates to: NIKAYRFSIHPQLSF*KATHPLTSTVHSVT Trigger: TGTAACTGAGTGGACTGTGCTTGTCAACGGATGTGTAGCTTTTCAGAAACTTAATTGGGGATGAATAGAAAACCTGTAAGCTTTGATGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR CCA 90 bp | ACTGACAGAAACACTGGGTGCAGGAGCTCAGCCGAGTCCCTCCTCAAGGCCCCGCAGTTGCACATCCTTTaGGAAGAGAGTAACTCGGCC | + |
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Preference number: 2 (lower is better) Translates to: TDRNTGCRSSAESLLKAPQLHIL*EESNSA Trigger: GGCCGAGTTACTCTCTTCCCAAAGGATGTGCAACTG...CGGGGCCTTGAGGAGGGACTCGGCTGAGCTCCTGCACCCAGTGTTTCTGTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR-3UTR TCA 90 bp | GTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCTGAGCAGGAAAGACTaGCAGAAACACTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: VQTASQNPLDLVMALESPLSRKD*QKHWVQ Trigger: CTGCACCCAGTGTTTCTGTCAGTCTTTCCTGCTCAG...GGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| 3UTR CAA 90 bp | GCTTCTGCTGCCTCTTGTAGGGCCAATAGGGCCTGGGCTTGCCAATaGAAGTCCACACCACGAGTGAATTTAACACATATTTCTCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: ASAASCRANRAWACQ*KSTPRVNLTHISLA Trigger: GGCAAGAGAAATATGTGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGCAGCAGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCTATTTCTCTTGCCTGTaGAGGAGTGGGGAAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: LFRDSKVQTASQNPLDLVYFSCL*RSGEGE Trigger: CTCCCCTTCCCCACTCCTTCACAGGCAAGAGAAATA...GACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR-3UTR TCA 90 bp | CACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTGAGCAGGAAAGACTaGCAGAAACACTGGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HILFRDSKVQTASQNPLDLSRKD*QKHWVQ Trigger: CTGCACCCAGTGTTTCTGTCAGTCTTTCCTGCTCAG...ATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| 3UTR-3UTR GCA 90 bp | CAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGTACAGAGGAAAGTCATaGAGTCTTCTCCTTCTCAAA | + |
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Preference number: 2 (lower is better) Translates to: QTASQNPLDLVMALESPRYRGKS*SLLLLK Trigger: TTTGAGAAGGAGAAGACTGCATGACTTTCCTCTGTA...CCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR CCA 90 bp | ACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGTTATTTTCAGGCCTTTaGAACGGTGTTGATTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: TLKGRGLYDGNAQPSRQLLFSGL*NGVDCL Trigger: GAGACAATCAACACCGTTCCAAAGGCCTGAAAATAA...CAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR CCA 90 bp | ATATTTAAAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATGCAGGTGTTGACTCCTaGGAGCTTAGGAACTGGCGG | + |
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Preference number: 2 (lower is better) Translates to: IFKATHTYCSETAKSRQHAGVDS*ELRNWR Trigger: CCGCCAGTTCCTAAGCTCCCAGGAGTCAACACCTGC...ATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTTTAAATAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR-3UTR CCA 90 bp | AAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAAATTATTTTCAGGCCTTTaGAACGGTGTTGATTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: KGRGLYDGNAQPSRQLLKLFSGL*NGVDCL Trigger: GAGACAATCAACACCGTTCCAAAGGCCTGAAAATAA...TTTGAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR TCA 90 bp | ACTAATGGTGAGGCTACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTTGGAACGGTGTTaGTTGTCTCATATATTACCT | + |
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Preference number: 2 (lower is better) Translates to: TNGEATLKGRGLYDGNAQPLERC*LSHILP Trigger: AGGTAATATATGAGACAATCAACACCGTTCCAAAGG...CTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR TCA 90 bp | CTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCCTCCATGAGTTCCAGTaGATCTTCCTTTCCATTATT | + |
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Preference number: 2 (lower is better) Translates to: LFRDSKVQTASQNPLDLVLHEFQ*IFLSII Trigger: AATAATGGAAAGGAAGATTCACTGGAACTCATGGAG...GACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR-3UTR TCA 90 bp | AACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCACCTCAAATAGTCACATaGGTAACTCACAAACTAAAG | + |
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Preference number: 2 (lower is better) Translates to: NTHILFRDSKVQTASQNPPQIVT*VTHKLK Trigger: CTTTAGTTTGTGAGTTACTCATGTGACTATTTGAGG...TGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCACATGAGTAACTCACAAACTAAAGTCAACCTTGGAGTCTCTTTATCTGAACCTTTGGAACGGTGTTaGTTGTCTCATATATTACCT | + |
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Preference number: 2 (lower is better) Translates to: SHMSNSQTKVNLGVSLSEPLERC*LSHILP Trigger: AGGTAATATATGAGACAATCAACACCGTTCCAAAGG...TTCAGATAAAGAGACTCCAAGGTTGACTTTAGTTTGTGAGTTACTCATGTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR GCA 72 bp | AGTCCCTCCTCAAGGCCCCGGATCCTCCGGGCCAGTTaGACATCCTTTGGGAAGAGAGTAACTCGGCCTGCA | + |
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Preference number: 3 (lower is better) Translates to: SPSSRPRILRAS*TSFGKRVTRPA Trigger: TGCAGGCCGAGTTACTCTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGATCCGGGGCCTTGAGGAGGGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR CCA 72 bp | AATGCTTCTGCTGCCTCTTGTAGGGCCAATAGGGCCTaGGCTTGCCAATTGAAGTCCACACCACGAGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: NASAASCRANRA*ACQLKSTPRVN Trigger: ATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGCAGCAGAAGCATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR GCA 72 bp | TCTGCTGCCTCTTGTAGGGCCAATAGGGCCTGGGCTTaGCAATTGAAGTCCACACCACGAGTGAATTTAACA | + |
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Preference number: 3 (lower is better) Translates to: SAASCRANRAWA*QLKSTPRVNLT Trigger: TGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCGCATCGCAGAATCCATaGGATCTAGTCATGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LFRDSKVQTASQNPLDLVASQNP*DLVMAL Trigger: CAGAGCCATGACTAGATCCAATGGATTCTGCGATGC...GACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| 3UTR TCA 72 bp | AGTTACATGATGCTGCCACTAATGGTGAGGCTACTCTaGAGGGCAGAGGTCTATATGATGGAAATGCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: SYMMLPLMVRLL*RAEVYMMEMPS Trigger: GCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGTGGCAGCATCATGTAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR CAA 90 bp | TGTCTCATATATTACCTCTGTTACAGAGGAAAGTCATGCAGTCTTCTCCTTCTCGCATCGCAGAATCCATaGGATCTAGTCATGGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: CLIYYLCYRGKSCSLLLLASQNP*DLVMAL Trigger: CAGAGCCATGACTAGATCCAATGGATTCTGCGATGC...GAGAAGGAGAAGACTGCATGACTTTCCTCTGTAACAGAGGTAATATATGAGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR-3UTR CAA 90 bp | TTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCCTTTGGAACGGTGTaGATTGTCTCATATATTACC | + |
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Preference number: 3 (lower is better) Translates to: FRDSKVQTASQNPLDLVMAFGTV*IVSYIT Trigger: GGTAATATATGAGACAATCAACACCGTTCCAAAGGC...CATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| 3UTR TCA 72 bp | GCTTACAGGTTTTCTATTCATCCCCAATTAAGTTTCTaGAAAGCTACACATCCGTTGACAAGCACAGTCCAC | + |
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Preference number: 3 (lower is better) Translates to: AYRFSIHPQLSF*KATHPLTSTVH Trigger: GTGGACTGTGCTTGTCAACGGATGTGTAGCTTTTCAGAAACTTAATTGGGGATGAATAGAAAACCTGTAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | ACACTGGGTGCAGGAGCTCAGCCGAGTCCCTCCTCAAGGCCCCGGATCCTCCGGGGCGGCGCGGGCCCATaGCACGCCGCAGAGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLGAGAQPSPSSRPRILRGGAGP*HAAEGA Trigger: AGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCC...CCGGAGGATCCGGGGCCTTGAGGAGGGACTCGGCTGAGCTCCTGCACCCAGTGT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | AGACTGACAGAAACACTGGGTGCAGGAGCTCAGCCGAGTCCCTCCTCAAGGCCCACACGCCGCAGAGGGTaGTGGCGCCCGGTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: RLTETLGAGAQPSPSSRPTRRRG*WRPVPR Trigger: CCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGT...GGGCCTTGAGGAGGGACTCGGCTGAGCTCCTGCACCCAGTGTTTCTGTCAGTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | AGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCACACGCCGCAGAGGGTaGTGGCGCCCGGTCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: SPDSIAESIGSSHGSGESTRRRG*WRPVPR Trigger: CCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGT...GGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | AGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCGGCTCCTGCTCGGGCTaGCGGGTCCGGGAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SPDSIAESIGSSHGSGESGSCSG*RVRERK Trigger: CTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCC...GGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | AGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGTATCAGGCTCCTGCTCGGGCTaGCGGGTCCGGGAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: SIAESIGSSHGSGESPVSGSCSG*RVRERK Trigger: CTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCC...TGATACCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | AACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCAGGCGGCGCGGGCCCATaGCACGCCGCAGAGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: NTHILFRDSKVQTASQNPGGAGP*HAAEGA Trigger: AGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCC...TGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | CACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATGGCGGCGCGGGCCCATaGCACGCCGCAGAGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: HILFRDSKVQTASQNPLDGGAGP*HAAEGA Trigger: AGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCC...ATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | ACTAATGGTGAGGCTACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGGGCTCCTGCTCGGGCTaGCGGGTCCGGGAGCGAAAG | + |
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Preference number: 4 (lower is better) Translates to: TNGEATLKGRGLYDGNAQGSCSG*RVRERK Trigger: CTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCC...CTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR GCA 90 bp | ACTGACAGAAACACTGGGTGCAGGAGCTCAGCCGAGTCCCTCCTCAAGGCCCCGAATAGGGCCTGGGCTTaGCAATTGAAGTCCACACCA | + |
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Preference number: 4 (lower is better) Translates to: TDRNTGCRSSAESLLKAPNRAWA*QLKSTP Trigger: TGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATT...CGGGGCCTTGAGGAGGGACTCGGCTGAGCTCCTGCACCCAGTGTTTCTGTCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | CAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCGCCGCGAGCCTCACATaGGCCGGTGCTTGGCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: QRQQSPDSIAESIGSSHGAASLT*AGAWQK Trigger: CTTCTGCCAAGCACCGGCTCATGTGAGGCTCGCGGC...GCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | GTGCAGGAGCTCAGCCGAGTCCCTCCTCAAGGCCCCGGATCCTCCGGGCCAGTTCTCCATGAGTTCCAGTaGATCTTCCTTTCCATTATT | + |
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Preference number: 4 (lower is better) Translates to: VQELSRVPPQGPGSSGPVLHEFQ*IFLSII Trigger: AATAATGGAAAGGAAGATTCACTGGAACTCATGGAG...AACTGGCCCGGAGGATCCGGGGCCTTGAGGAGGGACTCGGCTGAGCTCCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | CAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGGACAGAAACACTGGGTaGAGGAGCTCAGCCGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: QTASQNPLDLVMALESPRDRNTG*RSSAES Trigger: GGACTCGGCTGAGCTCCTGCACCCAGTGTTTCTGTC...CCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR CCA 90 bp | CAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCCCGGGAGCGAAAGGCTaGCTTCTGGGGAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: QRQQSPDSIAESIGSSHGPGAKG*LLGSPE Trigger: CTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGG...GCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | CAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGGGCCTGCATGTAAGGTaGGGAGATAGGCGTCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: QTASQNPLDLVMALESPRGLHVR*GDRRPQ Trigger: TTGAGGACGCCTATCTCCTCACCTTACATGCAGGCC...CCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | AGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAAAGGACAGAAACACTGGGTaGAGGAGCTCAGCCGAGTCC | + |
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Preference number: 4 (lower is better) Translates to: RAEVYMMEMPSLPGNCSKDRNTG*RSSAES Trigger: GGACTCGGCTGAGCTCCTGCACCCAGTGTTTCTGTC...CTTTGAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CCA 90 bp | ACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATCCGGGAGCGAAAGGCTaGCTTCTGGGGAGCCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: THTYCSETAKSRQHRRIHPGAKG*LLGSPE Trigger: CTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGG...ATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR CCA 90 bp | AATGCTTCTGCTGCCTCTTGTAGGGCCAATAGGGCCTGGGCTTGCCAATTGAAGAGGGCCAATAGGGCCTaGGCTTGCCAATTGAAGTCC | + |
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Preference number: 4 (lower is better) Translates to: NASAASCRANRAWACQLKRANRA*ACQLKS Trigger: GGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCT...CTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGCAGCAGAAGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | AGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTCTCCGCCGACTGTGTTaGTGGGAGGAAGCGCCTAAG | + |
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Preference number: 4 (lower is better) Translates to: RQQSPDSIAESIGSSHGSLRRLC*WEEAPK Trigger: CTTAGGCGCTTCCTCCCATCAACACAGTCGGCGGAG...AGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | AGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCAAGGGATCAGGCGGCTaGAGGGCAGCTTCCTTATCA | + |
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Preference number: 4 (lower is better) Translates to: SPDSIAESIGSSHGSGESKGSGG*RAASLS Trigger: TGATAAGGAAGCTGCCCTTCAGCCGCCTGATCCCTT...GGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR GCA 90 bp | AAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAAGCCCAGAGAACGCTGTaGCGCGAGCCTCACATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KQHTHTVQRQQSPDSIAEAQRTL*REPHMS Trigger: GCTCATGTGAGGCTCGCGGCACAGCGTTCTCTGGGC...TTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR CCA 90 bp | CAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGCAGTTGCACATCCTTTaGGAAGAGAGTAACTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QTASQNPLDLVMALESPRQLHIL*EESNSA Trigger: GGCCGAGTTACTCTCTTCCCAAAGGATGTGCAACTG...CCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | CACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTCCGCCGACTGTGTTaGTGGGAGGAAGCGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: HILFRDSKVQTASQNPLDLRRLC*WEEAPK Trigger: CTTAGGCGCTTCCTCCCATCAACACAGTCGGCGGAG...ATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR GCA 90 bp | AGTCACATGAGTAACTCACAAACTAAAGTCAACCTTGGAGTCTCTTTATCTGAAACACGCCGCAGAGGGTaGTGGCGCCCGGTCCCACGG | + |
|
Preference number: 4 (lower is better) Translates to: SHMSNSQTKVNLGVSLSETRRRG*WRPVPR Trigger: CCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGT...TTCAGATAAAGAGACTCCAAGGTTGACTTTAGTTTGTGAGTTACTCATGTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | AGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCATCCTCCGGGCCAGTTaGACATCCTTTGGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPDSIAESIGSSHGSGESILRAS*TSFGKR Trigger: TCTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGAT...GGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR CCA 90 bp | CACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCGAAAGGCTGGCTTCTaGGGAGCCCAGAGAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HILFRDSKVQTASQNPLDRKAGF*GAQRTL Trigger: CAGCGTTCTCTGGGCTCCCCAGAAGCCAGCCTTTCG...ATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR CCA 90 bp | ACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATCGAAAGGCTGGCTTCTaGGGAGCCCAGAGAACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: THTYCSETAKSRQHRRIHRKAGF*GAQRTL Trigger: CAGCGTTCTCTGGGCTCCCCAGAAGCCAGCCTTTCG...ATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR CCA 90 bp | CTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCGCAGGTGTTGACTCCTaGGAGCTTAGGAACTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LFRDSKVQTASQNPLDLVAGVDS*ELRNWR Trigger: CCGCCAGTTCCTAAGCTCCCAGGAGTCAACACCTGC...GACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAGGTGTGTGCTCTTCTaGAGCTTTCGGATCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGRGLYDGNAQPSRQLLRCVLF*SFRISF Trigger: AAAGGAGATCCGAAAGCTTCAGAAGAGCACACACCT...GAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | ACTAATGGTGAGGCTACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGGGCCTGCATGTAAGGTaGGGAGATAGGCGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TNGEATLKGRGLYDGNAQGLHVR*GDRRPQ Trigger: TTGAGGACGCCTATCTCCTCACCTTACATGCAGGCC...CTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | AAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAAAGGGCAGAGGTCTATATaGTGGAAATGCCCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KGRGLYDGNAQPSRQLLKGQRSI*WKCPAF Trigger: GAAGGCTGGGCATTTCCATCATATAGACCTCTGCCC...TTTGAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAAAGATGGTGAGGCTACTCTaGAGGGCAGAGGTCTATATG | + |
|
Preference number: 4 (lower is better) Translates to: RAEVYMMEMPSLPGNCSKMVRLL*RAEVYM Trigger: CATATAGACCTCTGCCCTTCAGAGTAGCCTCACCAT...CTTTGAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTATTTCTCTTGCCTGTaGAGGAGTGGGGAAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRQQSPDSIAESIGSSHGYFSCL*RSGEGE Trigger: CTCCCCTTCCCCACTCCTTCACAGGCAAGAGAAATA...GCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000419525.5 |
||
| CDS-3UTR GCA 90 bp | CACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATGACAGAAACACTGGGTaGAGGAGCTCAGCCGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HILFRDSKVQTASQNPLDDRNTG*RSSAES Trigger: GGACTCGGCTGAGCTCCTGCACCCAGTGTTTCTGTC...ATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTGCCAATTGAAGTCCACACCACGAGTGAATTTAACACATATTTCTCTTCCGGGAGCGAAAGGCTaGCTTCTGGGGAGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WACQLKSTPRVNLTHISLPGAKG*LLGSPE Trigger: CTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGG...AAGAGAAATATGTGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| 3UTR CAA 72 bp | AGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATaGGATCTAGTCATGGCTCTGGAGAGTCCCCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: RDSKVQTASQNP*DLVMALESPRY Trigger: ATACCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | AATGCTTCTGCTGCCTCTTGTAGGGCCAATAGGGCCTGGGCTTGCCAATTGAAGGCGTCCTCAAAGAGATaGACTAGAAATGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NASAASCRANRAWACQLKASSKR*TRNASA Trigger: AGCAGAAGCATTTCTAGTTCATCTCTTTGAGGACGC...CTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGCAGCAGAAGCATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGGCCTGCATGTAAGGTaGGGAGATAGGCGTCCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: FRDSKVQTASQNPLDLVMGLHVR*GDRRPQ Trigger: TTGAGGACGCCTATCTCCTCACCTTACATGCAGGCC...CATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGGCAGAGGTCTATATaGTGGAAATGCCCAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RQQSPDSIAESIGSSHGSGQRSI*WKCPAF Trigger: GAAGGCTGGGCATTTCCATCATATAGACCTCTGCCC...AGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR CCA 90 bp | AGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATAGGGCCAATAGGGCCTaGGCTTGCCAATTGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SNTHILFRDSKVQTASQNRANRA*ACQLKS Trigger: GGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCT...ATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | AGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCGCGTCCTCAAAGAGATaGACTAGAAATGCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPDSIAESIGSSHGSGESASSKR*TRNASA Trigger: AGCAGAAGCATTTCTAGTTCATCTCTTTGAGGACGC...GGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR GCA 90 bp | ATATTTAAAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATGCCCAGAGAACGCTGTaGCGCGAGCCTCACATGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFKATHTYCSETAKSRQHAQRTL*REPHMS Trigger: GCTCATGTGAGGCTCGCGGCACAGCGTTCTCTGGGC...ATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTTTAAATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCTTATCAAGAGGTGTGTaGTCTTCTGAAGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LKGRGLYDGNAQPSRQLLLSRGV*SSEAFG Trigger: TCCGAAAGCTTCAGAAGAGCACACACCTCTTGATAA...GAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | ACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATATCCTCCGGGCCAGTTaGACATCCTTTGGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: THTYCSETAKSRQHRRIHILRAS*TSFGKR Trigger: TCTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGAT...ATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| 3UTR CAA 72 bp | GCCTCTTGTAGGGCCAATAGGGCCTGGGCTTGCCAATaGAAGTCCACACCACGAGTGAATTTAACACATATT | + |
|
Preference number: 4 (lower is better) Translates to: ASCRANRAWACQ*KSTPRVNLTHI Trigger: AATATGTGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATTGGCCCTACAAGAGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS-3UTR TCA 90 bp | TTACATGATGCTGCCACTAATGGTGAGGCTACTCTGAAGGGCAGAGGTCTATATATGGTGAGGCTACTCTaGAGGGCAGAGGTCTATATG | + |
|
Preference number: 4 (lower is better) Translates to: LHDAATNGEATLKGRGLYMVRLL*RAEVYM Trigger: CATATAGACCTCTGCCCTTCAGAGTAGCCTCACCAT...ATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGTGGCAGCATCATGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | ACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATAAGCTACACATCCGTTaGCAAGCACAGTCCACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: THTYCSETAKSRQHRRIHKLHIR*QAQSTQ Trigger: CTGAGTGGACTGTGCTTGTCAACGGATGTGTAGCTT...ATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | AGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGTATCACCCCAATTAAGTTTCTaGAAAGCTACACATCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SIAESIGSSHGSGESPVSPQLSF*KATHPL Trigger: CAACGGATGTGTAGCTTTTCAGAAACTTAATTGGGG...TGATACCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAAAGCCCCAATTAAGTTTCTaGAAAGCTACACATCCGTTG | + |
|
Preference number: 4 (lower is better) Translates to: RAEVYMMEMPSLPGNCSKPQLSF*KATHPL Trigger: CAACGGATGTGTAGCTTTTCAGAAACTTAATTGGGG...CTTTGAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR GCA 90 bp | AGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATAACACATATTTCTCTTaGCAGGCGGCTGAAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SNTHILFRDSKVQTASQNNTYFS*QAAEGQ Trigger: CTGCCCTTCAGCCGCCTGGCAAGAGAAATATGTGTT...ATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | ACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATAATAGGGCCTGGGCTTaGCAATTGAAGTCCACACCA | + |
|
Preference number: 4 (lower is better) Translates to: THTYCSETAKSRQHRRIHNRAWA*QLKSTP Trigger: TGGTGTGGACTTCAATTGGCAAGCCCAGGCCCTATT...ATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR CCA 90 bp | AAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAACAGTTGCACATCCTTTaGGAAGAGAGTAACTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KQHTHTVQRQQSPDSIAEQLHIL*EESNSA Trigger: GGCCGAGTTACTCTCTTCCCAAAGGATGTGCAACTG...TTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR CCA 90 bp | CAATTAGGAGCAGGTGTTGACTCCTGGGAGCTTAGGAACTGGCGGATCTCTTACGAAATCACCAGTAATTaGGTGATGAGAGGCAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLGAGVDSWELRNWRISYEITSN*VMRGNL Trigger: GAGATTGCCTCTCATCACCCAATTACTGGTGATTTC...GTAAGAGATCCGCCAGTTCCTAAGCTCCCAGGAGTCAACACCTGCTCCTAATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | AGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATAGGTGTGTGCTCTTCTaGAGCTTTCGGATCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHILFRDSKVQTASQNRCVLF*SFRISF Trigger: AAAGGAGATCCGAAAGCTTCAGAAGAGCACACACCT...ATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR GCA 90 bp | AGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTGGAGAGTCCCCGGTATCATACAGAGGAAAGTCATaGAGTCTTCTCCTTCTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SIAESIGSSHGSGESPVSYRGKS*SLLLLK Trigger: TTTGAGAAGGAGAAGACTGCATGACTTTCCTCTGTA...TGATACCGGGGACTCTCCAGAGCCATGACTAGATCCAATGGATTCTGCGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCAGCCTTCCAGGCAACTaGTCAAAGTGGTCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: QRQQSPDSIAESIGSSHGSLPGN*SKWSYF Trigger: AAAATAAGACCACTTTGAGCAGTTGCCTGGAAGGCT...GCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | TGTCTCATATATTACCTCTGTTACAGAGGAAAGTCATGCAGTCTTCTCCTTCTCCTGAGCAGGAAAGACTaGCAGAAACACTGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: CLIYYLCYRGKSCSLLLLLSRKD*QKHWVQ Trigger: CTGCACCCAGTGTTTCTGTCAGTCTTTCCTGCTCAG...GAGAAGGAGAAGACTGCATGACTTTCCTCTGTAACAGAGGTAATATATGAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | TGGGCTTGCCAATTGAAGTCCACACCACGAGTGAATTTAACACATATTTCTCTTCTGAGCAGGAAAGACTaGCAGAAACACTGGGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WACQLKSTPRVNLTHISLLSRKD*QKHWVQ Trigger: CTGCACCCAGTGTTTCTGTCAGTCTTTCCTGCTCAG...AAGAGAAATATGTGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
||
| CDS-3UTR GCA 90 bp | ACTAATGGTGAGGCTACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGTTATCAAGAGGTGTGTaGTCTTCTGAAGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNGEATLKGRGLYDGNAQLSRGV*SSEAFG Trigger: TCCGAAAGCTTCAGAAGAGCACACACCTCTTGATAA...CTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGTAGCCTCACCATTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTGCCAATTGAAGTCCACACCACGAGTGAATTTAACACATATTTCTCTTATCCTCCGGGCCAGTTaGACATCCTTTGGGAAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WACQLKSTPRVNLTHISLILRAS*TSFGKR Trigger: TCTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGAT...AAGAGAAATATGTGTTAAATTCACTCGTGGTGTGGACTTCAATTGGCAAGCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTTTGGAACGGTGTTGATTGTCTCATATATTACCTCTGTTACAGAGGAAAGGTGTGTGCTCTTCTaGAGCTTTCGGATCTCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QAFGTVLIVSYITSVTEERCVLF*SFRISF Trigger: AAAGGAGATCCGAAAGCTTCAGAAGAGCACACACCT...TTCCTCTGTAACAGAGGTAATATATGAGACAATCAACACCGTTCCAAAGGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR TCA 90 bp | AGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTCCTTTGGAACGGTGTTaGTTGTCTCATATATTACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQQSPDSIAESIGSSHGSPLERC*LSHILP Trigger: AGGTAATATATGAGACAATCAACACCGTTCCAAAGG...AGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR GCA 90 bp | ACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTTATCAAGAGGTGTGTaGTCTTCTGAAGCTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: THTYCSETAKSRQHRRIHLSRGV*SSEAFG Trigger: TCCGAAAGCTTCAGAAGAGCACACACCTCTTGATAA...ATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
||
| CDS-3UTR GCA 90 bp | AGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATAGCCTTCCAGGCAACTaGTCAAAGTGGTCTTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNTHILFRDSKVQTASQNSLPGN*SKWSYF Trigger: AAAATAAGACCACTTTGAGCAGTTGCCTGGAAGGCT...ATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
||
| CDS-3UTR CCA 90 bp | AGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGCTCTTTATTTTCAGGCCTTTaGAACGGTGTTGATTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQQSPDSIAESIGSSHGSLFSGL*NGVDCL Trigger: GAGACAATCAACACCGTTCCAAAGGCCTGAAAATAA...AGAGCCATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | CAGGCCTTTGGAACGGTGTTGATTGTCTCATATATTACCTCTGTTACAGAGGAAGCGTCCTCAAAGAGATaGACTAGAAATGCTTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: QAFGTVLIVSYITSVTEEASSKR*TRNASA Trigger: AGCAGAAGCATTTCTAGTTCATCTCTTTGAGGACGC...TTCCTCTGTAACAGAGGTAATATATGAGACAATCAACACCGTTCCAAAGGCCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | ATATTTAAAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATAAGCTACACATCCGTTaGCAAGCACAGTCCACTCAG | + |
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Preference number: 4 (lower is better) Translates to: IFKATHTYCSETAKSRQHKLHIR*QAQSTQ Trigger: CTGAGTGGACTGTGCTTGTCAACGGATGTGTAGCTT...ATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTTTAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CCA 90 bp | ATATTTAAAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCAGTTGCACATCCTTTaGGAAGAGAGTAACTCGGCC | + |
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Preference number: 4 (lower is better) Translates to: IFKATHTYCSETAKSRQHQLHIL*EESNSA Trigger: GGCCGAGTTACTCTCTTCCCAAAGGATGTGCAACTG...ATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTTTAAATAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR CCA 90 bp | AGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATTTATTTTCAGGCCTTTaGAACGGTGTTGATTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: SNTHILFRDSKVQTASQNLFSGL*NGVDCL Trigger: GAGACAATCAACACCGTTCCAAAGGCCTGAAAATAA...ATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR GCA 90 bp | AGTCACATGAGTAACTCACAAACTAAAGTCAACCTTGGAGTCTCTTTATCTGAATACAGAGGAAAGTCATaGAGTCTTCTCCTTCTCAAA | + |
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Preference number: 4 (lower is better) Translates to: SHMSNSQTKVNLGVSLSEYRGKS*SLLLLK Trigger: TTTGAGAAGGAGAAGACTGCATGACTTTCCTCTGTA...TTCAGATAAAGAGACTCCAAGGTTGACTTTAGTTTGTGAGTTACTCATGTGACT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | CATATATTACCTCTGTTACAGAGGAAAGTCATGCAGTCTTCTCCTTCTCAAAAACCTCAAATAGTCACATaGGTAACTCACAAACTAAAG | + |
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Preference number: 4 (lower is better) Translates to: HILPLLQRKVMQSSPSQKPQIVT*VTHKLK Trigger: CTTTAGTTTGTGAGTTACTCATGTGACTATTTGAGG...TTTTTGAGAAGGAGAAGACTGCATGACTTTCCTCTGTAACAGAGGTAATATATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR TCA 90 bp | AAAATATTTAAAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCCTCAAATAGTCACATaGGTAACTCACAAACTAAAG | + |
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Preference number: 4 (lower is better) Translates to: KIFKATHTYCSETAKSRQPQIVT*VTHKLK Trigger: CTTTAGTTTGTGAGTTACTCATGTGACTATTTGAGG...CTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTTTAAATATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS TCA 90 bp | GCCTCCTCGGGGCCTCGGGCTTTCGGCTCCGGCGGCGCGGGCCCATaGCACGCCGCAGAGGGTGCTGGCGCCCGGTCCCACGGCTCCTGC | + |
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Preference number: 5 (lower is better) Translates to: ASSGPRAFGSGGAGP*HAAEGAGARSHGSC Trigger: GCAGGAGCCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCCGGAGCCGAAAGCCCGAGGCCCCGAGGAGGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 ENST00000460030.1 |
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| CDS GCA 90 bp | GGCTTTCGGCTCCGGCGGCGCGGGCCCATGACACGCCGCAGAGGGTaGTGGCGCCCGGTCCCACGGCTCCTGCTCGGGCTGCCGGGTCCG | + |
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Preference number: 5 (lower is better) Translates to: GFRLRRRGPMTRRRG*WRPVPRLLLGLPGP Trigger: CGGACCCGGCAGCCCGAGCAGGAGCCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCCGGAGCCGAAAGCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS CCA 90 bp | TTTCGGCTCCGGCGGCGCGGGCCCATGACACGCCGCAGAGGGTGCTaGCGCCCGGTCCCACGGCTCCTGCTCGGGCTGCCGGGTCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: FRLRRRGPMTRRRGC*RPVPRLLLGLPGPG Trigger: TCCCGGACCCGGCAGCCCGAGCAGGAGCCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCCGGAGCCGAAA 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS GCA 90 bp | GCCGCAGAGGGTGCTGGCGCCCGGTCCCACGGCTCCTGCTCGGGCTaGCGGGTCCGGGAGCGAAAGGCTGGCTTCTGGGGAGCCCAGAGA | + |
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Preference number: 5 (lower is better) Translates to: AAEGAGARSHGSCSG*RVRERKAGFWGAQR Trigger: TCTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCCGTGGGACCGGGCGCCAGCACCCTCTGCGGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS CCA 90 bp | GGCTCCTGCTCGGGCTGCCGGGTCCGGGAGCGAAAGGCTGGCTTCTaGGGAGCCCAGAGAACGCTGTGCCGCGAGCCTCACATGAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: GSCSGCRVRERKAGF*GAQRTLCREPHMSR Trigger: CCGGCTCATGTGAGGCTCGCGGCACAGCGTTCTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS CCA 90 bp | GTCCCACGGCTCCTGCTCGGGCTGCCGGGTCCGGGAGCGAAAGGCTaGCTTCTGGGGAGCCCAGAGAACGCTGTGCCGCGAGCCTCACAT | + |
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Preference number: 5 (lower is better) Translates to: VPRLLLGLPGPGAKG*LLGSPENAVPRASH Trigger: ATGTGAGGCTCGCGGCACAGCGTTCTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCCGTGGGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | AGGACCCAATTAGGAGCAGGTGTTGACTCCTGGGAGCTTAGGAACTGGCGGATCGCCTGGGCTTGCCAATaGAAGTCCACACCACGAGTG | + |
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Preference number: 5 (lower is better) Translates to: RTQLGAGVDSWELRNWRIAWACQ*KSTPRV Trigger: CACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGC...GATCCGCCAGTTCCTAAGCTCCCAGGAGTCAACACCTGCTCCTAATTGGGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419525.5 |
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| CDS TCA 90 bp | AGGCGGCTGAAGGGCAGCTTCCTTATCAAGAGGTGTGTGCTCTTCTaGAGCTTTCGGATCTCCTTTAGCCAACCTTGTCTCCGCCGACTG | + |
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Preference number: 5 (lower is better) Translates to: RRLKGSFLIKRCVLF*SFRISFSQPCLRRL Trigger: CAGTCGGCGGAGACAAGGTTGGCTAAAGGAGATCCGAAAGCTTCAGAAGAGCACACACCTCTTGATAAGGAAGCTGCCCTTCAGCCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 ENST00000460030.1 ENST00000472719.5 ENST00000475662.5 |
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| CDS-3UTR CAA 90 bp | AGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCAAAGGCCTGGGCTTGCCAATaGAAGTCCACACCACGAGTG | + |
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Preference number: 5 (lower is better) Translates to: RAEVYMMEMPSLPGNCSKAWACQ*KSTPRV Trigger: CACTCGTGGTGTGGACTTCAATTGGCAAGCCCAGGC...CTTTGAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | CTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGCTCGCATCGCAGAATCCATaGGATCTAGTCATGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: LKGRGLYDGNAQPSRQLLASQNP*DLVMAL Trigger: CAGAGCCATGACTAGATCCAATGGATTCTGCGATGC...GAGCAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | TTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATCCATTGGATCTAGTCATGGATCCTCCGGGCCAGTaGCACATCCTTTGGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: FRDSKVQTASQNPLDLVMDPPGQ*HILWEE Trigger: CTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGATC...CATGACTAGATCCAATGGATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR CAA 90 bp | AAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAAGATCCTCCGGGCCAGTaGCACATCCTTTGGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: KQHTHTVQRQQSPDSIAEDPPGQ*HILWEE Trigger: CTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGATC...TTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS-3UTR CAA 90 bp | ACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGGCATCGCAGAATCCATaGGATCTAGTCATGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: TLKGRGLYDGNAQPSRQLASQNP*DLVMAL Trigger: CAGAGCCATGACTAGATCCAATGGATTCTGCGATGC...CAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | ACTCTGAAGGGCAGAGGTCTATATGATGGAAATGCCCAGCCTTCCAGGCAACTGAAAGCTACACATCCGTaGACAAGCACAGTCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: TLKGRGLYDGNAQPSRQLKATHP*TSTVHS Trigger: TGAGTGGACTGTGCTTGTCAACGGATGTGTAGCTTT...CAGTTGCCTGGAAGGCTGGGCATTTCCATCATATAGACCTCTGCCCTTCAGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | AAGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAAAAAGCTACACATCCGTaGACAAGCACAGTCCACTCA | + |
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Preference number: 5 (lower is better) Translates to: KQHTHTVQRQQSPDSIAEKATHP*TSTVHS Trigger: TGAGTGGACTGTGCTTGTCAACGGATGTGTAGCTTT...TTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | AGTCACATGAGTAACTCACAAACTAAAGTCAACCTTGGAGTCTCTTTATCTGAAGATCCTCCGGGCCAGTaGCACATCCTTTGGGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: SHMSNSQTKVNLGVSLSEDPPGQ*HILWEE Trigger: CTCTTCCCAAAGGATGTGCAACTGGCCCGGAGGATC...TTCAGATAAAGAGACTCCAAGGTTGACTTTAGTTTGTGAGTTACTCATGTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | AGCAACACACACATACTGTTCAGAGACAGCAAAGTCCAGACAGCATCGCAGAATGCCTTTGGAACGGTGTaGATTGTCTCATATATTACC | + |
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Preference number: 5 (lower is better) Translates to: SNTHILFRDSKVQTASQNAFGTV*IVSYIT Trigger: GGTAATATATGAGACAATCAACACCGTTCCAAAGGC...ATTCTGCGATGCTGTCTGGACTTTGCTGTCTCTGAACAGTATGTGTGTGTTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS-3UTR CAA 90 bp | AGTCACATGAGTAACTCACAAACTAAAGTCAACCTTGGAGTCTCTTTATCTGAAGCCTTTGGAACGGTGTaGATTGTCTCATATATTACC | + |
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Preference number: 5 (lower is better) Translates to: SHMSNSQTKVNLGVSLSEAFGTV*IVSYIT Trigger: GGTAATATATGAGACAATCAACACCGTTCCAAAGGC...TTCAGATAAAGAGACTCCAAGGTTGACTTTAGTTTGTGAGTTACTCATGTGACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS TCA 72 bp | GGGCCTCGGGCTTTCGGCTCCGGCGGCGCGGGCCCATaGCACGCCGCAGAGGGTGCTGGCGCCCGGTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: GPRAFGSGGAGP*HAAEGAGARSH Trigger: GTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCCGGAGCCGAAAGCCCGAGGCCC 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 ENST00000460030.1 |
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| CDS GCA 72 bp | CTCCGGCGGCGCGGGCCCATGACACGCCGCAGAGGGTaGTGGCGCCCGGTCCCACGGCTCCTGCTCGGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRRRGPMTRRRG*WRPVPRLLLGL Trigger: CAGCCCGAGCAGGAGCCGTGGGACCGGGCGCCAGCACCCTCTGCGGCGTGTCATGGGCCCGCGCCGCCGGAG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 ENST00000460030.1 |
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| CDS GCA 72 bp | GCCGCAGAGGGTGCTGGCGCCCGGTCCCACGGCTCCTaGTCGGGCTGCCGGGTCCGGGAGCGAAAGGCTGGC | + |
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Preference number: 6 (lower is better) Translates to: AAEGAGARSHGS*SGCRVRERKAG Trigger: GCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCCGTGGGACCGGGCGCCAGCACCCTCTGCGGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS GCA 72 bp | GGTGCTGGCGCCCGGTCCCACGGCTCCTGCTCGGGCTaGCGGGTCCGGGAGCGAAAGGCTGGCTTCTGGGGA | + |
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Preference number: 6 (lower is better) Translates to: GAGARSHGSCSG*RVRERKAGFWG Trigger: TCCCCAGAAGCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAGCCGTGGGACCGGGCGCCAGCACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000233505.12 ENST00000335756.9 ENST00000419525.5 |
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| CDS CCA 72 bp | TCGGGCTGCCGGGTCCGGGAGCGAAAGGCTGGCTTCTaGGGAGCCCAGAGAACGCTGTGCCGCGAGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGCRVRERKAGF*GAQRTLCREPH Trigger: GTGAGGCTCGCGGCACAGCGTTCTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS CCA 72 bp | CTCCTGCTCGGGCTGCCGGGTCCGGGAGCGAAAGGCTaGCTTCTGGGGAGCCCAGAGAACGCTGTGCCGCGA | + |
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Preference number: 6 (lower is better) Translates to: LLLGLPGPGAKG*LLGSPENAVPR Trigger: TCGCGGCACAGCGTTCTCTGGGCTCCCCAGAAGCCAGCCTTTCGCTCCCGGACCCGGCAGCCCGAGCAGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000233505.12 ENST00000335756.9 |
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| CDS CAA 72 bp | TGTGTTGATGGGAGGAAGCGCTTTGCCGAGAGCGTGTaGATGGAGCCGGTAACAAGCATGAGCCCGGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: CVDGRKRFAESV*MEPVTSMSPAR Trigger: CCTGGCCGGGCTCATGCTTGTTACCGGCTCCATCAACACGCTCTCGGCAAAGCGCTTCCTCCCATCAACACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475662.5 |
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| CDS TCA 72 bp | ATCTCCTTTAGCCAACCTTGTCTCCGCCGACTGTGTTaGTGGGAGGAAGCGCATGAGCCGGTGCTTGGCAGA | + |
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Preference number: 6 (lower is better) Translates to: ISFSQPCLRRLC*WEEAHEPVLGR Trigger: TCTGCCAAGCACCGGCTCATGCGCTTCCTCCCATCAACACAGTCGGCGGAGACAAGGTTGGCTAAAGGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000472719.5 |
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| CDS TCA 72 bp | ATCTCCTTTAGCCAACCTTGTCTCCGCCGACTGTGTTaGTGGGAGGAAGCGCTTTGCCGAGAGCGTGTTGAT | + |
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Preference number: 6 (lower is better) Translates to: ISFSQPCLRRLC*WEEALCRERVD Trigger: ATCAACACGCTCTCGGCAAAGCGCTTCCTCCCATCAACACAGTCGGCGGAGACAAGGTTGGCTAAAGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000475662.5 |
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