RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEMIP (Homo sapiens)

Ensembl gene IDs: ENSG00000103888

Ensembl transcript IDs: ENST00000220244.7, ENST00000356249.9, ENST00000394685.8, ENST00000495041.1, ENST00000559966.1, ENST00000560027.1

Found 1276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTTGTCCCCATTTCCAGAAGCTACCTCAGGAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAATGTGGTGTGGCAGCAAGGGCTAGG +
Preference number: 1 (lower is better)
Translates to: LVPISRSYLRSAWAL*GRLLRQCGVAARAR
Trigger: CCTAGCCCTTGCTGCCACACCACATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTTCTGGAAATGGGGACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp GTAGCACCAATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTaGCAGGTAGTGAACAAAGTGAAGGCCACAGGGACCGCCAACACC +
Preference number: 1 (lower is better)
Translates to: VAPMGSCSYCAPRLG*QVVNKVKATGTANT
Trigger: GGTGTTGGCGGTCCCTGTGGCCTTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp GCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTaGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCA +
Preference number: 1 (lower is better)
Translates to: AKLAHQKHGEPYSLC*ASPVELQRQESQVA
Trigger: TGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp TTTGGTGGGAAAGACCTCCCTGACAGTTGGCTCCCACCTGGGGAATaGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGGGAG +
Preference number: 1 (lower is better)
Translates to: FGGKDLPDSWLPPGE*TLGPSLMGAVGWRE
Trigger: CTCCCTCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTGTCAGGGAGGTCTTTCCCACCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp AAGCAGCAAAGCCCATTGCTCCCCTCTGACCACACTTCTCCATCATaGGTGGGCCAGAGAGACGTGAGCAAAGGGCGACCCCGTAGTCAC +
Preference number: 1 (lower is better)
Translates to: KQQSPLLPSDHTSPS*VGQRDVSKGRPRSH
Trigger: GTGACTACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp ACCCCCACTGAAGAGGCACAGATAGGAGAGAAGCACCCAAGAGGCTaGAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGG +
Preference number: 1 (lower is better)
Translates to: TPTEEAQIGEKHPRG*RKVNVSSIGQHRPR
Trigger: CCTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGGTGCTTCTCTCCTATCTGTGCCTCTTCAGTGGGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp GAGACAGGAGAGCCAGGTAGCACCAATGGGGAGTTGCAGCTACTGTaGACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGGCCAC +
Preference number: 1 (lower is better)
Translates to: ETGEPGSTNGELQLL*TQAGLTGSEQSEGH
Trigger: GTGGCCTTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGCTACCTGGCTCTCCTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp TCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTaGTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTA +
Preference number: 1 (lower is better)
Translates to: SAKLAHQKHGEPYSL*WASPVELQRQESQV
Trigger: TACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp GGCTCACCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATaGCATCCTCCGAACTGGGGTACTTCTTCCCATCCACTTCAATGT +
Preference number: 1 (lower is better)
Translates to: GSPRALGSRQSPPPG*HPPNWGTSSHPLQC
Trigger: ACATTGAAGTGGATGGGAAGAAGTACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
3UTR CCA 90 bp TCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTaGAGGCCCCCTGTGCTCAGTTCCCTGGATGAAGAGCAAATGAGG +
Preference number: 1 (lower is better)
Translates to: SEIPGRGSTSTSRVS*RPPVLSSLDEEQMR
Trigger: CCTCATTTGCTCTTCATCCAGGGAACTGAGCACAGGGGGCCTCCAGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp AGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGTCTCCTGATATGGTCCCCAAACCCC +
Preference number: 1 (lower is better)
Translates to: RLPPSWVRAPAKVDL*CQHNPGLLIWSPNP
Trigger: GGGGTTTGGGGACCATATCAGGAGACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp CCATGGGGATCTGTGAATGACCAGCCCTCCAGACTACCTCCTAGCTaGGTCAGGGCTCCTGCCAAAGTGGATCTTTGCTGTCAGCACAAC +
Preference number: 1 (lower is better)
Translates to: PWGSVNDQPSRLPPS*VRAPAKVDLCCQHN
Trigger: GTTGTGCTGACAGCAAAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp GCTGTTCAGACACCCAAGATCAGCCAAATTGGCTCACCAGAAACATaGCGAGCCCTACTCCCTCTGCTGGGCCTCACCTGTAGAGCTGCA +
Preference number: 1 (lower is better)
Translates to: AVQTPKISQIGSPET*RALLPLLGLTCRAA
Trigger: TGCAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTGGGTGTCTGAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp TGGGGTGGACCCAATAGCTGTTCAGACACCCAAGATCAGCCAAATTaGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGGGCCT +
Preference number: 1 (lower is better)
Translates to: WGGPNSCSDTQDQPN*LTRNMASPTPSAGP
Trigger: AGGCCCAGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTGGGTGTCTGAACAGCTATTGGGTCCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp TGTCAGCACAACCCAGGTCTCCTGATATGGTCCCCAAACCCCCACTaGAGAGGCACAGATAGGAGAGAAGCACCCAAGAGGCTGCAGGAA +
Preference number: 1 (lower is better)
Translates to: CQHNPGLLIWSPNPH*RGTDRREAPKRLQE
Trigger: TTCCTGCAGCCTCTTGGGTGCTTCTCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGTGCTGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp GCACTGGCCTCCATTTTACCTCTCTGTGATTTCTCCACCTGGCATTaGAGTGCACATGGACCTGACTGCCTGCCCTACTGGACTGCAGAC +
Preference number: 1 (lower is better)
Translates to: ALASILPLCDFSTWH*SAHGPDCLPYWTAD
Trigger: GTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTGCAATGCCAGGTGGAGAAATCACAGAGAGGTAAAATGGAGGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp GCCTGGGGACTGAATTCCTCTGTGCTCATAAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTTCTCCATCATGAGTGGGCCAGAGAG +
Preference number: 1 (lower is better)
Translates to: AWGLNSSVLISSKAH*SPLTTLLHHEWARE
Trigger: CTCTCTGGCCCACTCATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCTTATGAGCACAGAGGAATTCAGTCCCCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp CTCCTGCCAAAGTGGATCTTTGCTGTCAGCACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCCACTGAAGAGGCACAGATAGGAGAG +
Preference number: 1 (lower is better)
Translates to: LLPKWIFAVSTTQVS*YGPQTPTEEAQIGE
Trigger: CTCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGCAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp TACATTTACCACCCTCACTTGTCTGCTGAAGACCATGGGGATCTGTaGATGACCAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTC +
Preference number: 1 (lower is better)
Translates to: YIYHPHLSAEDHGDL*MTSPPDYLLAGSGL
Trigger: GAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTCTTCAGCAGACAAGTGAGGGTGGTAAATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp GAAATGGCACTGGCCTCCATTTTACCTCTCTGTGATTTCTCCACCTaGCATTGCAGTGCACATGGACCTGACTGCCTGCCCTACTGGACT +
Preference number: 1 (lower is better)
Translates to: EMALASILPLCDFST*HCSAHGPDCLPYWT
Trigger: AGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTGCAATGCCAGGTGGAGAAATCACAGAGAGGTAAAATGGAGGCCAGTGCCATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp TGGAGGGAGCCAGGCAGGCCCTCTTTGAAGGAAAGAGTTTGTGGTTaGGGCAGGAAAGGGGATAAATGTAGTTCATCACAAGACCCAGGG +
Preference number: 1 (lower is better)
Translates to: WREPGRPSLKERVCG*GRKGDKCSSSQDPG
Trigger: CCCTGGGTCTTGTGATGAACTACATTTATCCCCTTTCCTGCCCCAACCACAAACTCTTTCCTTCAAAGAGGGCCTGCCTGGCTCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp AGAACTAAAAGGGCCTTTGAGAGTCATCTAGTCCAAGTCCAAACCTaGCACTCAAAGTCTCCTGAAAGGTGGACACGGCCAGAGGCAGGG +
Preference number: 1 (lower is better)
Translates to: RTKRAFESHLVQVQT*HSKSPERWTRPEAG
Trigger: CCCTGCCTCTGGCCGTGTCCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTCAAAGGCCCTTTTAGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp AGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTaGAAGATGTTTGGTGGGAAAGACCTCCCTGACAGTTGGCTCCCA +
Preference number: 1 (lower is better)
Translates to: SHIFKSRALWSPPSS*KMFGGKDLPDSWLP
Trigger: TGGGAGCCAACTGTCAGGGAGGTCTTTCCCACCAAACATCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp GTGTGCGCTGGGGCACCCAGCATCATGGATATCAGTGGATATCCATaGACTGTTGGGTTCCAGGTACCATGTGAAATGCAGCAGATTTCT +
Preference number: 1 (lower is better)
Translates to: VCAGAPSIMDISGYP*TVGFQVPCEMQQIS
Trigger: AGAAATCTGCTGCATTTCACATGGTACCTGGAACCCAACAGTTCATGGATATCCACTGATATCCATGATGCTGGGTGCCCCAGCGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp ACCACTAATCTCCCTGGAAGAAGTCCTTCCTGTGACTCTGGCCTTTaGAGCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCC +
Preference number: 1 (lower is better)
Translates to: TTNLPGRSPSCDSGL*SSHIFKSRALWSPP
Trigger: GGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGCTTCAAAGGCCAGAGTCACAGGAAGGACTTCTTCCAGGGAGATTAGTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 90 bp AGGAAAGGGGATAAATGTAGTTCATCACAAGACCCAGGGAGACTCTaGTGCCTCGTGCAAGATTATAAACCACAGATAGAGTTCTCCCTC +
Preference number: 1 (lower is better)
Translates to: RKGDKCSSSQDPGRL*CLVQDYKPQIEFSL
Trigger: GAGGGAGAACTCTATCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTCTCCCTGGGTCTTGTGATGAACTACATTTATCCCCTTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 90 bp AAAGGGGATAAATGTAGTTCATCACAAGACCCAGGGAGACTCTGGTaGCTCGTGCAAGATTATAAACCACAGATAGAGTTCTCCCTCTTA +
Preference number: 1 (lower is better)
Translates to: KGDKCSSSQDPGRLW*LVQDYKPQIEFSLL
Trigger: TAAGAGGGAGAACTCTATCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTCTCCCTGGGTCTTGTGATGAACTACATTTATCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 90 bp CACATCCTAAGTGGTTCACAGTGTGAGACCCTTGCATTAGAAGAGTaGAAACTCAACAAAACCGTGGACAAGAAGGACATGAGGTCATTT +
Preference number: 1 (lower is better)
Translates to: HILSGSQCETLALEE*KLNKTVDKKDMRSF
Trigger: AAATGACCTCATGTCCTTCTTGTCCACGGTTTTGTTGAGTTTTCACTCTTCTAATGCAAGGGTCTCACACTGTGAACCACTTAGGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGCCTTCCCAGGCAGCTaGTGGCAGGGGCTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKAFPGS*WQGLGD
Trigger: GTCCCCCAGCCCCTGCCAGCAGCTGCCTGGGAAGGC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCCTCTCCATCCCGTGTaGGCTGGGGCACCCAGCATC +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRPLHPV*AGAPSI
Trigger: GATGCTGGGTGCCCCAGCGCACACGGGATGGAGAGG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCCTCTCCATCCCGTGTaGGCTGGGGCACCCAGCATC +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGPLHPV*AGAPSI
Trigger: GATGCTGGGTGCCCCAGCGCACACGGGATGGAGAGG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGGAGGGCTGAATCCCTaGGCCATTCCAGAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRGGLNP*AIPEAA
Trigger: GGCAGCCTCTGGAATGGCTCAGGGATTCAGCCCTCC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCGGCAGGGAGGGCTaGATCCCTGAGCCATTCCAG +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGSGREG*IPEPFQ
Trigger: CTGGAATGGCTCAGGGATTCAGCCCTCCCTGCCGCT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCCTCTCCATCCCGTGTaGGCTGGGGCACCCAGCATC +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKPLHPV*AGAPSI
Trigger: GATGCTGGGTGCCCCAGCGCACACGGGATGGAGAGG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAAGCTACCTCAGGAGTaGCTGGGCACTCTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRKLPQE*LGTLGP
Trigger: CGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCCTGAGCCTCCCCTCTaGAATGGCACTGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGPEPPL*NGTGLH
Trigger: ATGGAGGCCAGTGCCATTTCAGAGGGGAGGCTCAGG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCCTGGAGGCCCCCTGTaGTCAGTTCCCTGGATGAAG +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRPGGPL*SVPWMK
Trigger: CTTCATCCAGGGAACTGAGCACAGGGGGCCTCCAGG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGAATGTTTCCAGCATTaGCCAGCACCGCCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRECFQH*PAPPQG
Trigger: CCCCTGGGGCGGTGCTGGCCAATGCTGGAAACATTC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 90 bp TCCAGAAGCTACCTCAGGAGTGCCTGGGCACTCTGGGGCCGGTTGTaGAGGCAATGTGGTGTGGCAGCAAGGGCTAGGGTGGGGCTCCCC +
Preference number: 2 (lower is better)
Translates to: SRSYLRSAWALWGRL*RQCGVAARARVGLP
Trigger: GGGGAGCCCCACCCTAGCCCTTGCTGCCACACCACATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTTCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGATGGACCTGACTGCCTaGCCTACTGGACTGCAGACC +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGMDLTA*PTGLQT
Trigger: GGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCAT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAAGTCTCCTGAAAGGTaGACACGGCCAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGKSPER*TRPEAG
Trigger: CCCTGCCTCTGGCCGTGTCCACCTTTCAGGAGACTT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGACTGCCTGCCCTACTaGACTGCAGACCCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKDCLPY*TADPSS
Trigger: GCTTGAGGGGTCTGCAGTCCAGTAGGGCAGGCAGTC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGG +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGSKKPS*ASPLKW
Trigger: CCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCACACTTCTCCATCATaGGTGGGCCAGAGAGACGTG +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRHTSPS*VGQRDV
Trigger: CACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAAGCTACCTCAGGAGTaGCTGGGCACTCTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCKLPQE*LGTLGP
Trigger: CGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGACATCTAGGGTCTCCTaGAGGCCCCCTGTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKTSRVS*RPPVLS
Trigger: ACTGAGCACAGGGGGCCTCCAGGAGACCCTAGATGT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCCACTCAAAGTCTCCTaGAAGGTGGACACGGCCAGA +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKPLKVS*KVDTAR
Trigger: TCTGGCCGTGTCCACCTTTCAGGAGACTTTGAGTGG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCAGTGCACATGGACCTaGCTGCCTGCCCTACTGGAC +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCQCTWT*LPALLD
Trigger: GTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCCCATTGCTCCCCTCTaGCCACACTTCTCCATCATG +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKPIAPL*PHFSIM
Trigger: CATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTTCTCCACCTGGCATTaGAGTGCACATGGACCTGAC +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRFSTWH*SAHGPD
Trigger: GTCAGGTCCATGTGCACTGCAATGCCAGGTGGAGAA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCTGATAGCCTTCCCTTaGCCCATCAGGGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGLIAFP*PIRAET
Trigger: TGTTTCAGCCCTGATGGGCCAAGGGAAGGCTATCAG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGAATGTTTCCAGCATTaGCCAGCACCGCCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCECFQH*PAPPQG
Trigger: CCCCTGGGGCGGTGCTGGCCAATGCTGGAAACATTC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGGTTCTTTCCCATCTTaGGGGCTCACTTTCCCCATC +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRGSFPS*GLTFPI
Trigger: GATGGGGAAAGTGAGCCCCCAAGATGGGAAAGAACC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSAWAL*GRLLRQ
Trigger: TTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 90 bp ATTTCCAGAAGCTACCTCAGGAGTGCCTGGGCACTCTGGGGCCGGTaGTTGAGGCAATGTGGTGTGGCAGCAAGGGCTAGGGTGGGGCTC +
Preference number: 2 (lower is better)
Translates to: ISRSYLRSAWALWGR*LRQCGVAARARVGL
Trigger: GAGCCCCACCCTAGCCCTTGCTGCCACACCACATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTTCTGGAAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCAGCTCCTAATCCTGTaGGGTTGGCTCTTGCTTACA +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRQLLIL*GWLLLT
Trigger: TGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCAGCTCCTAATCCTGTaGGGTTGGCTCTTGCTTACA +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGQLLIL*GWLLLT
Trigger: TGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTGGATGAAGAGCAAATaGGGCCCTAAGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: TANTKGRAGLCALGAGGKWMKSK*GPKAGA
Trigger: AGCTCCTGCCTTAGGGCCTCATTTGCTCTTCATCCA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: LCWASPVELQRQESQVAPSGAGC*GNVVWQ
Trigger: CTGCCACACCACATTGCCTCAACAACCGGCCCCAGA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATCCCCCACTGGTCTaGTGCCAAGAGTCACCGTCA +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCHPPLV*CQESPS
Trigger: TGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGT +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRAKVDL*CQHNPG
Trigger: ACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTATGGACCTGACTGCCTaGCCTACTGGACTGCAGACC +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCMDLTA*PTGLQT
Trigger: GGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCAT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGTCAGAGGCAGGGCTaGCTGGGGACTGAATTCCTC +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSQRQG*LGTEFL
Trigger: GAGGAATTCAGTCCCCAGGCAGCCCTGCCTCTGACT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 90 bp AAAGTGAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTaGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCAT +
Preference number: 2 (lower is better)
Translates to: KVKATGTANTKGRAG*CALGAGGKRSASCH
Trigger: ATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGACCATGGGGATCTGTaGATGACCAGCCCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: LCWASPVELQRQESQVAPDHGDL*MTSPPD
Trigger: GTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGTCCAAGTCCAAACCTaGCACTCAAAGTCTCCTGAA +
Preference number: 2 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGVQVQT*HSKSPE
Trigger: TTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGAC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGACTGCCTGCCCTACTaGACTGCAGACCCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGDCLPY*TADPSS
Trigger: GCTTGAGGGGTCTGCAGTCCAGTAGGGCAGGCAGTC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCCTCTGAAATGGCACTaGCCTCCATTTTACCTCTCT +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRPLKWH*PPFYLS
Trigger: AGAGAGGTAAAATGGAGGCCAGTGCCATTTCAGAGG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCC +
Preference number: 2 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLTTQVS*YGPQTP
Trigger: GGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGATCAGTGGATATCCATaGACTGTTGGGTTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRISGYP*TVGFQV
Trigger: TACCTGGAACCCAACAGTTCATGGATATCCACTGAT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCTATATTTCCAGCTCTaGAATCCCAGGCCGAGGGAG +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCLYFQL*NPRPRE
Trigger: CTCCCTCGGCCTGGGATTTCAGAGCTGGAAATATAG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGCACCCAGGCTGGGCTaGCAGGTAGTGAACAAAGTG +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGAPRLG*QVVNKV
Trigger: CACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTT +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSSKAH*SPLTTL
Trigger: AAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGCACCAATGGGGAGTTaGAGCTACTGTGCACCCAGG +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGAPMGS*SYCAPR
Trigger: CCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp CGTGTGGCTCACCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATGCCCAGAGGTGGAAGAAGTaGTGCTTGGAACTCTCCATC +
Preference number: 2 (lower is better)
Translates to: RVAHHAPLVPVNHHHLDAQRWKK*CLELSI
Trigger: GATGGAGAGTTCCAAGCAGCACTTCTTCCACCTCTG...GGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAGCCACACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
3UTR-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGCCTCCCCTCTGAAATaGCACTGGCCTCCATTTTAC +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCASPLK*HWPPFY
Trigger: GTAAAATGGAGGCCAGTGCCATTTCAGAGGGGAGGC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACGGGTTTGTGTGCGCTaGGAGCAGGAGGGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGRVCVR*EQEGRD
Trigger: ATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGAGGCTGCAGGAAAGTaGATGTTTCCAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: LCWASPVELQRQESQVAPEAAGK*MFPALA
Trigger: GGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTA +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEWARET*AKGDPV
Trigger: TACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTA +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLWARET*AKGDPV
Trigger: TACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACACACTTCTCCATCATaGGTGGGCCAGAGAGACGTG +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGHTSPS*VGQRDV
Trigger: CACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAGCCTTCCCAGGCAGCTaGTGGCAGGGGCTGGGGGAC +
Preference number: 2 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKAFPGS*WQGLGD
Trigger: GTCCCCCAGCCCCTGCCAGCAGCTGCCTGGGAAGGC...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGT +
Preference number: 2 (lower is better)
Translates to: GRAGLCALGAGGKRSASCAKVDL*CQHNPG
Trigger: ACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCCATCCCGTGTGCGCTaGGGCACCCAGCATCATGGA +
Preference number: 2 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAPSRVR*GTQHHG
Trigger: TCCATGATGCTGGGTGCCCCAGCGCACACGGGATGG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGCCTCCCCTCTGAAATaGCACTGGCCTCCATTTTAC +
Preference number: 2 (lower is better)
Translates to: LCWASPVELQRQESQVAPASPLK*HWPPFY
Trigger: GTAAAATGGAGGCCAGTGCCATTTCAGAGGGGAGGC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQSAWAL*GRLLRQ
Trigger: TTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 90 bp TGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAATGGGGAGTaGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAA +
Preference number: 2 (lower is better)
Translates to: CRAAETGEPGSTNGE*QLLCTQAGLTGSEQ
Trigger: TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCTCCAGGTAGACACTTaGGTAGGGGCAGGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLLQVDT*VGAGGS
Trigger: GCTGCCACCTGCCCCTACTCAAGTGTCTACCTGGAG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCC +
Preference number: 2 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQTTQVS*YGPQTP
Trigger: GGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGAGCGGCAGGGAGGGCTaGATCCCTGAGCCATTCCAG +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQSGREG*IPEPFQ
Trigger: CTGGAATGGCTCAGGGATTCAGCCCTCCCTGCCGCT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACTATATTTCCAGCTCTaGAATCCCAGGCCGAGGGAG +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGLYFQL*NPRPRE
Trigger: CTCCCTCGGCCTGGGATTTCAGAGCTGGAAATATAG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSESGAGC*GNVVWQ
Trigger: CTGCCACACCACATTGCCTCAACAACCGGCCCCAGA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGAAGCTACCTCAGGAGTaGCTGGGCACTCTGGGGCCG +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQKLPQE*LGTLGP
Trigger: CGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCCAGCCATCCCCCACTaGTCTGCTGCCAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLPAIPH*SAAKSH
Trigger: GTGACTCTTGGCAGCAGACCAGTGGGGGATGGCTGG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAACCAGCCATCCCCCACTaGTCTGCTGCCAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEPAIPH*SAAKSH
Trigger: GTGACTCTTGGCAGCAGACCAGTGGGGGATGGCTGG...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCTGATAGCCTTCCCTTaGCCCATCAGGGCTGAAACA +
Preference number: 2 (lower is better)
Translates to: PKRLQESECFQHWPAPPQLIAFP*PIRAET
Trigger: TGTTTCAGCCCTGATGGGCCAAGGGAAGGCTATCAG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGAATGTTTCCAGCATTaGCCAGCACCGCCCCAGGGG +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLECFQH*PAPPQG
Trigger: CCCCTGGGGCGGTGCTGGCCAATGCTGGAAACATTC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCCATCCCGTGTGCGCTaGGGCACCCAGCATCATGGA +
Preference number: 2 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIPSRVR*GTQHHG
Trigger: TCCATGATGCTGGGTGCCCCAGCGCACACGGGATGG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAATGGGGATCTGTGAATaGCCAGCCCTCCAGACTACC +
Preference number: 2 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQMGICE*PALQTT
Trigger: GGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCAT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGACCATGGGGATCTGTaGATGACCAGCCCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLDHGDL*MTSPPD
Trigger: GTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGACCATGGGGATCTGTaGATGACCAGCCCTCCAGAC +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEDHGDL*MTSPPD
Trigger: GTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCAGTGCACATGGACCTaGCTGCCTGCCCTACTGGAC +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQQCTWT*LPALLD
Trigger: GTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCCTGAGCCTCCCCTCTaGAATGGCACTGGCCTCCAT +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQPEPPL*NGTGLH
Trigger: ATGGAGGCCAGTGCCATTTCAGAGGGGAGGCTCAGG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGGAGGGCTGAATCCCTaGGCCATTCCAGAGGCTGCC +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERGGLNP*AIPEAA
Trigger: GGCAGCCTCTGGAATGGCTCAGGGATTCAGCCCTCC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAGCGGCAGGGAGGGCTaGATCCCTGAGCCATTCCAG +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSGREG*IPEPFQ
Trigger: CTGGAATGGCTCAGGGATTCAGCCCTCCCTGCCGCT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCACACTTCTCCATCATaGGTGGGCCAGAGAGACGTG +
Preference number: 2 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPHTSPS*VGQRDV
Trigger: CACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAG +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQSGAGC*GNVVWQ
Trigger: CTGCCACACCACATTGCCTCAACAACCGGCCCCAGA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAAGTCTCCTGAAAGGTaGACACGGCCAGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLKSPER*TRPEAG
Trigger: CCCTGCCTCTGGCCGTGTCCACCTTTCAGGAGACTT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAATGCAGCAGATTTCTaGAATCTCAGAACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRNAADF*NLRTKR
Trigger: CCTTTTAGTTCTGAGATTCCAGAAATCTGCTGCATT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACCATCCCGTGTGCGCTaGGGCACCCAGCATCATGGA +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERPSRVR*GTQHHG
Trigger: TCCATGATGCTGGGTGCCCCAGCGCACACGGGATGG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAA +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQSAWAL*GRLLRQ
Trigger: TTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATACCTCAGGAGTGCCTaGGCACTCTGGGGCCGGTTG +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGYLRSA*ALWGRL
Trigger: CAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACTTACAGGAGCTCTTTaGGCTCTCTATAAGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGLTGAL*ALYKVG
Trigger: GCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACTCCAGGTAGACACTTaGGTAGGGGCAGGTGGCAGC +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERLQVDT*VGAGGS
Trigger: GCTGCCACCTGCCCCTACTCAAGTGTCTACCTGGAG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATCCCCAAACCCCCACTaGAGAGGCACAGATAGGAGA +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSESPNPH*RGTDRR
Trigger: TCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGG +
Preference number: 2 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASKKPS*ASPLKW
Trigger: CCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCT...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGCTCAGTTCCCTGGATaGAGAGCAAATGAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPAQFPG*RANEAL
Trigger: TAGGGCCTCATTTGCTCTTCATCCAGGGAACTGAGC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGCACATGGACCTGACTaGCTGCCCTACTGGACTGCA +
Preference number: 2 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIAHGPD*LPYWTA
Trigger: TGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTAGTCAGAGGCAGGGCTaGCTGGGGACTGAATTCCTC +
Preference number: 2 (lower is better)
Translates to: ALGAGGKRSASCHSTLVISQRQG*LGTEFL
Trigger: GAGGAATTCAGTCCCCAGGCAGCCCTGCCTCTGACT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGAGCCCTACTCCCTCTaGTGGGCCTCACCTGTAGAG +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAEREPYSL*WASPVE
Trigger: CTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCCAGCCATCCCCCACTaGTCTGCTGCCAAGAGTCAC +
Preference number: 2 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWPAIPH*SAAKSH
Trigger: GTGACTCTTGGCAGCAGACCAGTGGGGGATGGCTGG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGGGCTCCTGCCAAAGTaGATCTTTGCTGTCAGCACA +
Preference number: 2 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPGLLPK*IFAVST
Trigger: TGTGCTGACAGCAAAGATCCACTTTGGCAGGAGCCC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGACTGCCTGCCCTACTaGACTGCAGACCCCTCAAGC +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERDCLPY*TADPSS
Trigger: GCTTGAGGGGTCTGCAGTCCAGTAGGGCAGGCAGTC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGCCTCCCCTCTGAAATaGCACTGGCCTCCATTTTAC +
Preference number: 2 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPASPLK*HWPPFY
Trigger: GTAAAATGGAGGCCAGTGCCATTTCAGAGGGGAGGC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGGACTTCACCCTCTTaGAGTCAGAGGCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQWTSPS*SQRQGC
Trigger: GCAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCGGGTTTGTGTGCGCTaGGAGCAGGAGGGAAGAGAT +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQRVCVR*EQEGRD
Trigger: ATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGAGGCTGCAGGAAAGTaGATGTTTCCAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEEAAGK*MFPALA
Trigger: GGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTTCCCCAAACCCCCACTaGAGAGGCACAGATAGGAGA +
Preference number: 2 (lower is better)
Translates to: ALGAGGKRSASCHSTLVISPNPH*RGTDRR
Trigger: TCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGA...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAATGGACCTGACTGCCTaGCCTACTGGACTGCAGACC +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERMDLTA*PTGLQT
Trigger: GGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCAT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGCACCAATGGGGAGTTaGAGCTACTGTGCACCCAGG +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGAPMGS*SYCAPR
Trigger: CCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTCCCCAAACCCCCACTaGAGAGGCACAGATAGGAGA +
Preference number: 2 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWSPNPH*RGTDRR
Trigger: TCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCC +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHTTQVS*YGPQTP
Trigger: GGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACCACTCAAAGTCTCCTaGAAGGTGGACACGGCCAGA +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGPLKVS*KVDTAR
Trigger: TCTGGCCGTGTCCACCTTTCAGGAGACTTTGAGTGG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGGATGAAGAGCAAATaGGGCCCTAAGGCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQWMKSK*GPKAGA
Trigger: AGCTCCTGCCTTAGGGCCTCATTTGCTCTTCATCCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACATCCCCCACTGGTCTaGTGCCAAGAGTCACCGTCA +
Preference number: 2 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKHPPLV*CQESPS
Trigger: TGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGCACATGGACCTGACTaGCTGCCCTACTGGACTGCA +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHAHGPD*LPYWTA
Trigger: TGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTT +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQSSKAH*SPLTTL
Trigger: AAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTGGACTTCACCCTCTTaGAGTCAGAGGCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHWTSPS*SQRQGC
Trigger: GCAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAGGAGCTCACTTCTGTaGACTTCACCCTCTTGGAGT +
Preference number: 2 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSERSSLL*TSPSWS
Trigger: ACTCCAAGAGGGTGAAGTCCACAGAAGTGAGCTCCT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGGGTTCTTTCCCATCTTaGGGGCTCACTTTCCCCATC +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQGSFPS*GLTFPI
Trigger: GATGGGGAAAGTGAGCCCCCAAGATGGGAAAGAACC...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCCTCCCTTAGCTGTGTaGTTCTTTCCCATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQPPLAV*FFPILG
Trigger: CCCCAAGATGGGAAAGAACCACACAGCTAAGGGAGG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GTCAATCACCACCACCTGGATGCCATCCTCCGAACTGGGGTACTTCTTCCCATCAAGTCGTTCCAGAGGTaGAAGAAGTGCTGCTTGGAA +
Preference number: 2 (lower is better)
Translates to: VNHHHLDAILRTGVLLPIKSFQR*KKCCLE
Trigger: TTCCAAGCAGCACTTCTTCCACCTCTGGAACGACTT...GATGGGAAGAAGTACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
3UTR-3UTR TCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAATGGGGATCTGTGAATaGCCAGCCCTCCAGACTACC +
Preference number: 2 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKMGICE*PALQTT
Trigger: GGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCAT...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTATCAGTGGATATCCATaGACTGTTGGGTTCCAGGTA +
Preference number: 2 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPISGYP*TVGFQV
Trigger: TACCTGGAACCCAACAGTTCATGGATATCCACTGAT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCCCATTGCTCCCCTCTaGCCACACTTCTCCATCATG +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHPIAPL*PHFSIM
Trigger: CATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAAGCACCCAAGAGGCTaGAGGAAAGTGAATGTTTCC +
Preference number: 2 (lower is better)
Translates to: RANEALRQELTSVDFTLLKHPRG*RKVNVS
Trigger: GGAAACATTCACTTTCCTGCAGCCTCTTGGGTGCTT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGGGCACCCAGCATCATaGATATCAGTGGATATCCAT +
Preference number: 2 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAGHPAS*ISVDIH
Trigger: ATGGATATCCACTGATATCCATGATGCTGGGTGCCC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACCTCCCTTAGCTGTGTaGTTCTTTCCCATCTTGGGG +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERPPLAV*FFPILG
Trigger: CCCCAAGATGGGAAAGAACCACACAGCTAAGGGAGG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGCAGCTGAAAGGGACTaGGGTGGACCCAATAGCTGT +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHAAERD*GGPNSC
Trigger: ACAGCTATTGGGTCCACCCCAGTCCCTTTCAGCTGC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 90 bp TCCCCAAGGATAGCCAGTTCTACCCCAGCTCCTAATCCTGTGAGGTaGGCTCTTGCTTACAGGAGTAAAGATTTCCTTAAGGCCAAGGCT +
Preference number: 2 (lower is better)
Translates to: SPRIASSTPAPNPVR*ALAYRSKDFLKAKA
Trigger: AGCCTTGGCCTTAAGGAAATCTTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACTGGCTATCCTTGGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAGAGGCTGCAGGAAAGTaGATGTTTCCAGCATTGGCC +
Preference number: 2 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKEAAGK*MFPALA
Trigger: GGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTC...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGGTTCCAGGTACCATGTaGAATGCAGCAGATTTCTGG +
Preference number: 2 (lower is better)
Translates to: DRVLPLTGALWALYKVGQVPGTM*NAADFW
Trigger: CCAGAAATCTGCTGCATTTCACATGGTACCTGGAAC...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACTGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTA +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNWARET*AKGDPV
Trigger: TACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCA...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTT +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHSSKAH*SPLTTL
Trigger: AAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp ATTGGCATTAACTACATGGCTGTTCTTAGACTTATTGGAAAGGCCAAGGGGACAGTTGAGCCACTTTCCTaGAGCCAAGTGGGCGCCTGC +
Preference number: 2 (lower is better)
Translates to: IGINYMAVLRLIGKAKGTVEPLS*SQVGAC
Trigger: GCAGGCGCCCACTTGGCTGCAGGAAAGTGGCTCAAC...TGTCCCCTTGGCCTTTCCAATAAGTCTAAGAACAGCCATGTAGTTAATGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
3UTR-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGGGCTCCTGCCAAAGTaGATCTTTGCTGTCAGCACA +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHGLLPK*IFAVST
Trigger: TGTGCTGACAGCAAAGATCCACTTTGGCAGGAGCCC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAGGAGCTCACTTCTGTaGACTTCACCCTCTTGGAGT +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGRSSLL*TSPSWS
Trigger: ACTCCAAGAGGGTGAAGTCCACAGAAGTGAGCTCCT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACTGGGAAAGACCTCCCTaGCAGTTGGCTCCCACCTGG +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNWERPP*QLAPTW
Trigger: CCAGGTGGGAGCCAACTGTCAGGGAGGTCTTTCCCA...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAAGCACCCAAGAGGCTaGAGGAAAGTGAATGTTTCC +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGKHPRG*RKVNVS
Trigger: GGAAACATTCACTTTCCTGCAGCCTCTTGGGTGCTT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGGGCACCCAGCATCATaGATATCAGTGGATATCCAT +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERGHPAS*ISVDIH
Trigger: ATGGATATCCACTGATATCCATGATGCTGGGTGCCC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCCCTACTCCCTCTGCTaGGCCTCACCTGTAGAGCTG +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNPYSLC*ASPVEL
Trigger: CAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACAAGATCAGCCAAATTaGCTCACCAGAAACATGGCG +
Preference number: 2 (lower is better)
Translates to: AAISLKAEPYGHLPAAERQDQPN*LTRNMA
Trigger: CGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 90 bp CTGGGGCACCCAGCATCATGGATATCAGTGGATATCCATGAACTGTaGGGTTCCAGGTACCATGTGAAATGCAGCAGATTTCTGGAATCT +
Preference number: 2 (lower is better)
Translates to: LGHPASWISVDIHEL*GSRYHVKCSRFLES
Trigger: AGATTCCAGAAATCTGCTGCATTTCACATGGTACCTGGAACCCAACAGTTCATGGATATCCACTGATATCCATGATGCTGGGTGCCCCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGTTCCAGGTACCATGTaGAATGCAGCAGATTTCTGG +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHVPGTM*NAADFW
Trigger: CCAGAAATCTGCTGCATTTCACATGGTACCTGGAAC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGCATTAAGCAGCAGCTaGAAGGGACTGGGGTGGACC +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNALSSS*KGLGWT
Trigger: GGTCCACCCCAGTCCCTTTCAGCTGCTGCTTAATGC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCATCCCCCACTGGTCTaGTGCCAAGAGTCACCGTCA +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNHPPLV*CQESPS
Trigger: TGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCCTCTGAAATGGCACTaGCCTCCATTTTACCTCTCT +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHPLKWH*PPFYLS
Trigger: AGAGAGGTAAAATGGAGGCCAGTGCCATTTCAGAGG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACTGGACTTCACCCTCTTaGAGTCAGAGGCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNWTSPS*SQRQGC
Trigger: GCAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCA...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACACATCTAGGGTCTCCTaGAGGCCCCCTGTGCTCAGT +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNTSRVS*RPPVLS
Trigger: ACTGAGCACAGGGGGCCTCCAGGAGACCCTAGATGT...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGAAAGAGTTTGTGGTTaGGGCAGGAAAGGGGATAAA +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGERVCG*GRKGDK
Trigger: TTTATCCCCTTTCCTGCCCCAACCACAAACTCTTTC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCAGTTGGCTCCCACCTaGGGAATGGACTCTTGGACC +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNQLAPT*GMDSWT
Trigger: GGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGACATTCAACATTCCTaGCCACCTGAAAGTGATCAC +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGDIQHS*PPESDH
Trigger: GTGATCACTTTCAGGTGGCCAGGAATGTTGAATGTC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGG +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNSKKPS*ASPLKW
Trigger: CCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCT...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGACTCTGGTGCCTCGTaGAAGATTATAAACCACAGA +
Preference number: 2 (lower is better)
Translates to: SLALGTPLPSNAKDISNHDSGAS*KIINHR
Trigger: TCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAACAGATCCTGTACTGTaGAACATATGTACAACTCTG +
Preference number: 2 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGTDPVL*NICTTL
Trigger: CAGAGTTGTACATATGTTTCACAGTACAGGATCTGT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTAATGCAGCAGATTTCTaGAATCTCAGAACTAAAAGG +
Preference number: 2 (lower is better)
Translates to: ALGAGGKRSASCHSTLVINAADF*NLRTKR
Trigger: CCTTTTAGTTCTGAGATTCCAGAAATCTGCTGCATT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCAGGCAGGCCCTCTTTaGAGGAAAGAGTTTGTGGTT +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNQAGPL*RKEFVV
Trigger: AACCACAAACTCTTTCCTTCAAAGAGGGCCTGCCTG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACACAGATCCTGTACTGTaGAACATATGTACAACTCTG +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNTDPVL*NICTTL
Trigger: CAGAGTTGTACATATGTTTCACAGTACAGGATCTGT...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACAAAATGCCTAGATATTaGCTCTTGGTGAATGGTTTA +
Preference number: 2 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNKMPRY*LLVNGL
Trigger: TAAACCATTCACCAAGAGCCAATATCTAGGCATTTT...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp ACCTCAGGAGTGCCTGGGCACTCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAGCAAGGGCTAGGGTGG +
Preference number: 3 (lower is better)
Translates to: TSGVPGHSGAGC*GNVVWQQGLGW
Trigger: CCACCCTAGCCCTTGCTGCCACACCACATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAAGCAGCAAAGCCCATaGCTCCCCTCTGACCACACT +
Preference number: 3 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRKQQSP*LPSDHT
Trigger: AGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCTT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGTGGACTTCACCCTCTaGGAGTCAGAGGCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: GRAGLCALGAGGKRSASCVDFTL*ESEAGL
Trigger: CAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCAC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTTCCTTCGAGGGGACTaGTCCCCATTTCCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRFLRGD*SPFPEA
Trigger: AGCTTCTGGAAATGGGGACAAGTCCCCTCGAAGGAA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp CCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTaGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATT +
Preference number: 3 (lower is better)
Translates to: PPTPRGGRVCVR*EQEGRDLLAVI
Trigger: AATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp GCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTaGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGC +
Preference number: 3 (lower is better)
Translates to: AHQKHGEPYSLC*ASPVELQRQES
Trigger: GCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGATATCCATGAACTGTaGGGTTCCAGGTACCATGTG +
Preference number: 3 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRDIHEL*GSRYHV
Trigger: CACATGGTACCTGGAACCCAACAGTTCATGGATATC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACTCTGGGGCCGGTTGTaGAGGCAATGTGGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGLWGRL*RQCGVA
Trigger: TGCCACACCACATTGCCTCAACAACCGGCCCCAGAG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAAGGGGAGGGCGGGTTaGTGTGCGCTGGGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQKGRAG*CALGAG
Trigger: TCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp AGCCCATTGCTCCCCTCTGACCACACTTCTCCATCATaGGTGGGCCAGAGAGACGTGAGCAAAGGGCGACCC +
Preference number: 3 (lower is better)
Translates to: SPLLPSDHTSPS*VGQRDVSKGRP
Trigger: GGGTCGCCCTTTGCTCACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp CCACCTGGCATTGCAGTGCACATGGACCTGACTGCCTaGCCTACTGGACTGCAGACCCCTCAAGCTAGGCAT +
Preference number: 3 (lower is better)
Translates to: PPGIAVHMDLTA*PTGLQTPQARH
Trigger: ATGCCTAGCTTGAGGGGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTGCAATGCCAGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp GGGACTTGTCCCCATTTCCAGAAGCTACCTCAGGAGTaGCTGGGCACTCTGGGGCCGGTTGTTGAGGCAATG +
Preference number: 3 (lower is better)
Translates to: GTCPHFQKLPQE*LGTLGPVVEAM
Trigger: CATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTTCTGGAAATGGGGACAAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp CGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATaGCATCCTCCGAACTGGGGTACTTCTTCCCATCCA +
Preference number: 3 (lower is better)
Translates to: RALGSRQSPPPG*HPPNWGTSSHP
Trigger: TGGATGGGAAGAAGTACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
3UTR-3UTR CAA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTTCCTTCGAGGGGACTaGTCCCCATTTCCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: GRAGLCALGAGGKRSASCFLRGD*SPFPEA
Trigger: AGCTTCTGGAAATGGGGACAAGTCCCCTCGAAGGAA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAAGGGGAGGGCGGGTTaGTGTGCGCTGGGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEKGRAG*CALGAG
Trigger: TCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp ACCACACTTCTCCATCATGAGTGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTAGTCACCAGCTTCAGC +
Preference number: 3 (lower is better)
Translates to: TTLLHHEWARET*AKGDPVVTSFS
Trigger: GCTGAAGCTGGTGACTACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp ATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTaGCAGGTAGTGAACAAAGTGAAGGCCACAGGGACC +
Preference number: 3 (lower is better)
Translates to: MGSCSYCAPRLG*QVVNKVKATGT
Trigger: GGTCCCTGTGGCCTTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp ATTTCCAGAAGCTACCTCAGGAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAATGTGGTGTGGCAGCA +
Preference number: 3 (lower is better)
Translates to: ISRSYLRSAWAL*GRLLRQCGVAA
Trigger: TGCTGCCACACCACATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTTCTGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp CTTGTCCCCATTTCCAGAAGCTACCTCAGGAGTGCCTaGGCACTCTGGGGCCGGTTGTTGAGGCAATGTGGT +
Preference number: 3 (lower is better)
Translates to: LVPISRSYLRSA*ALWGRLLRQCG
Trigger: ACCACATTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTTCTGGAAATGGGGACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp AAAGACCTCCCTGACAGTTGGCTCCCACCTGGGGAATaGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGG +
Preference number: 3 (lower is better)
Translates to: KDLPDSWLPPGE*TLGPSLMGAVG
Trigger: CCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTGTCAGGGAGGTCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATGCCAAAGTGGATCTTaGCTGTCAGCACAACCCAGG +
Preference number: 3 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGCQSGS*LSAQPR
Trigger: CCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGCA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGCACTCTGGGGCCGGTaGTTGAGGCAATGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEALWGR*LRQCGV
Trigger: CACACCACATTGCCTCAACAACCGGCCCCAGAGTGC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp CCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGTCTCCTGATATGGTCC +
Preference number: 3 (lower is better)
Translates to: PSWVRAPAKVDL*CQHNPGLLIWS
Trigger: GGACCATATCAGGAGACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp GAGCCAGGTAGCACCAATGGGGAGTTGCAGCTACTGTaGACCCAGGCTGGGCTGACAGGTAGTGAACAAAGT +
Preference number: 3 (lower is better)
Translates to: EPGSTNGELQLL*TQAGLTGSEQS
Trigger: ACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGCTACCTGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp ACACCCAAGATCAGCCAAATTGGCTCACCAGAAACATaGCGAGCCCTACTCCCTCTGCTGGGCCTCACCTGT +
Preference number: 3 (lower is better)
Translates to: TPKISQIGSPET*RALLPLLGLTC
Trigger: ACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTGGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGGCACTCTGGGGCCGGTaGTTGAGGCAATGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: DRVLPLTGALWALYKVGQALWGR*LRQCGV
Trigger: CACACCACATTGCCTCAACAACCGGCCCCAGAGTGC...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATAAGGGGAGGGCGGGTTaGTGTGCGCTGGGAGCAGGA +
Preference number: 3 (lower is better)
Translates to: SLALGTPLPSNAKDISNHKGRAG*CALGAG
Trigger: TCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp AACCCAGGTCTCCTGATATGGTCCCCAAACCCCCACTaGAGAGGCACAGATAGGAGAGAAGCACCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: NPGLLIWSPNPH*RGTDRREAPKR
Trigger: CCTCTTGGGTGCTTCTCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGACCATATCAGGAGACCTGGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp CCCCCAGCCTTCATTCCTGTAAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGGCACTGGCCTCCATTT +
Preference number: 3 (lower is better)
Translates to: PPAFIPVSKKPS*ASPLKWHWPPF
Trigger: AAATGGAGGCCAGTGCCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCTTACAGGAATGAAGGCTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGTGGACTTCACCCTCTaGGAGTCAGAGGCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGVDFTL*ESEAGL
Trigger: CAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCAC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACTCTGGGGCCGGTTGTaGAGGCAATGTGGTGTGGCA +
Preference number: 3 (lower is better)
Translates to: AAISLKAEPYGHLPAAERLWGRL*RQCGVA
Trigger: TGCCACACCACATTGCCTCAACAACCGGCCCCAGAG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATTTGAAGGAAAGAGTTaGTGGTTGGGGCAGGAAAGG +
Preference number: 3 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGFEGKS*WLGQER
Trigger: CCTTTCCTGCCCCAACCACAAACTCTTTCCTTCAAA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp AAGTGGATCTTTGCTGTCAGCACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCCACTGAAGAGGCACAG +
Preference number: 3 (lower is better)
Translates to: KWIFAVSTTQVS*YGPQTPTEEAQ
Trigger: CTGTGCCTCTTCAGTGGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGTGCTGACAGCAAAGATCCACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp ACCACAGATAGAGTTCTCCCTCTTACAGGAGCTCTTTaGGCTCTCTATAAGGTGGGCCAGGGAGAGAGCAGG +
Preference number: 3 (lower is better)
Translates to: TTDRVLPLTGAL*ALYKVGQGESR
Trigger: CCTGCTCTCTCCCTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATCTGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTAAGCAGCAAAGCCCATaGCTCCCCTCTGACCACACT +
Preference number: 3 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIKQQSP*LPSDHT
Trigger: AGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCTT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp GAAGAGGCACAGATAGGAGAGAAGCACCCAAGAGGCTaGAGGAAAGTGAATGTTTCCAGCATTGGCCAGCAC +
Preference number: 3 (lower is better)
Translates to: EEAQIGEKHPRG*RKVNVSSIGQH
Trigger: GTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGGTGCTTCTCTCCTATCTGTGCCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp AGGGCCTTTGAGAGTCATCTAGTCCAAGTCCAAACCTaGCACTCAAAGTCTCCTGAAAGGTGGACACGGCCA +
Preference number: 3 (lower is better)
Translates to: RAFESHLVQVQT*HSKSPERWTRP
Trigger: TGGCCGTGTCCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTCAAAGGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp CCCAATAGCTGTTCAGACACCCAAGATCAGCCAAATTaGCTCACCAGAAACATGGCGAGCCCTACTCCCTCT +
Preference number: 3 (lower is better)
Translates to: PNSCSDTQDQPN*LTRNMASPTPS
Trigger: AGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTGGGTGTCTGAACAGCTATTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAAAGCAGCAAAGCCCATaGCTCCCCTCTGACCACACT +
Preference number: 3 (lower is better)
Translates to: AAISLKAEPYGHLPAAERKQQSP*LPSDHT
Trigger: AGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCTT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATGCCAAAGTGGATCTTaGCTGTCAGCACAACCCAGG +
Preference number: 3 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGCQSGS*LSAQPR
Trigger: CCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGCA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCCTAATCCTGTGAGGTaGGCTCTTGCTTACAGGAGT +
Preference number: 3 (lower is better)
Translates to: DRVLPLTGALWALYKVGQPNPVR*ALAYRS
Trigger: ACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGATATCCATGAACTGTaGGGTTCCAGGTACCATGTG +
Preference number: 3 (lower is better)
Translates to: RANEALRQELTSVDFTLLDIHEL*GSRYHV
Trigger: CACATGGTACCTGGAACCCAACAGTTCATGGATATC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGATATCCATGAACTGTaGGGTTCCAGGTACCATGTG +
Preference number: 3 (lower is better)
Translates to: QDQPNWLTRNMASPTPSADIHEL*GSRYHV
Trigger: CACATGGTACCTGGAACCCAACAGTTCATGGATATC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATTCCTTCGAGGGGACTaGTCCCCATTTCCAGAAGCT +
Preference number: 3 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGFLRGD*SPFPEA
Trigger: AGCTTCTGGAAATGGGGACAAGTCCCCTCGAAGGAA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR GCA 72 bp CTGAATTCCTCTGTGCTCATAAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTTCTCCATCATGAGTGG +
Preference number: 3 (lower is better)
Translates to: LNSSVLISSKAH*SPLTTLLHHEW
Trigger: CCACTCATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCTTATGAGCACAGAGGAATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAATGCCAAAGTGGATCTTaGCTGTCAGCACAACCCAGG +
Preference number: 3 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKCQSGS*LSAQPR
Trigger: CCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGCA...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAATTTACCACCCTCACTaGTCTGCTGAAGACCATGGG +
Preference number: 3 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGIYHPH*SAEDHG
Trigger: CCCATGGTCTTCAGCAGACAAGTGAGGGTGGTAAAT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGATTTACCACCCTCACTaGTCTGCTGAAGACCATGGG +
Preference number: 3 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWIYHPH*SAEDHG
Trigger: CCCATGGTCTTCAGCAGACAAGTGAGGGTGGTAAAT...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp GGGGCACCCAGCATCATGGATATCAGTGGATATCCATaGACTGTTGGGTTCCAGGTACCATGTGAAATGCAG +
Preference number: 3 (lower is better)
Translates to: GAPSIMDISGYP*TVGFQVPCEMQ
Trigger: CTGCATTTCACATGGTACCTGGAACCCAACAGTTCATGGATATCCACTGATATCCATGATGCTGGGTGCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp TTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTaGAAGATGTTTGGTGGGAAAGACCTCCCTGACAGT +
Preference number: 3 (lower is better)
Translates to: FKSRALWSPPSS*KMFGGKDLPDS
Trigger: ACTGTCAGGGAGGTCTTTCCCACCAAACATCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp CTCCCTGGAAGAAGTCCTTCCTGTGACTCTGGCCTTTaGAGCAGCCATATCTTTAAAAGCAGAGCCCTATGG +
Preference number: 3 (lower is better)
Translates to: LPGRSPSCDSGL*SSHIFKSRALW
Trigger: CCATAGGGCTCTGCTTTTAAAGATATGGCTGCTTCAAAGGCCAGAGTCACAGGAAGGACTTCTTCCAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCCTAATCCTGTGAGGTaGGCTCTTGCTTACAGGAGT +
Preference number: 3 (lower is better)
Translates to: SLALGTPLPSNAKDISNHPNPVR*ALAYRS
Trigger: ACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGTGGACTTCACCCTCTaGGAGTCAGAGGCAGGGCTG +
Preference number: 3 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNVDFTL*ESEAGL
Trigger: CAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCAC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCTGGGGAATGGACTCTaGGACCGAGTCTCATGGGTG +
Preference number: 3 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNLGNGL*DRVSWV
Trigger: CACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp AAAATGTCGTTAATGTATGGGACAGTCAGCCTTAGAGTCAAAATGCCTAGAAAGGGGGACAAGATGAGGTaGAGCCACTTTCCTGCAGCC +
Preference number: 3 (lower is better)
Translates to: KMSLMYGTVSLRVKMPRKGDKMR*SHFPAA
Trigger: GGCTGCAGGAAAGTGGCTCAACCTCATCTTGTCCCC...CTTTCTAGGCATTTTGACTCTAAGGCTGACTGTCCCATACATTAACGACATTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000560027.1
3UTR TCA 72 bp AGTGGTTCACAGTGTGAGACCCTTGCATTAGAAGAGTaGAAACTCAACAAAACCGTGGACAAGAAGGACATG +
Preference number: 3 (lower is better)
Translates to: SGSQCETLALEE*KLNKTVDKKDM
Trigger: CATGTCCTTCTTGTCCACGGTTTTGTTGAGTTTTCACTCTTCTAATGCAAGGGTCTCACACTGTGAACCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CCA 72 bp GATAAATGTAGTTCATCACAAGACCCAGGGAGACTCTaGTGCCTCGTGCAAGATTATAAACCACAGATAGAG +
Preference number: 3 (lower is better)
Translates to: DKCSSSQDPGRL*CLVQDYKPQIE
Trigger: CTCTATCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTCTCCCTGGGTCTTGTGATGAACTACATTTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR TCA 72 bp TGGATATCCATGAACTGTTGGGTTCCAGGTACCATGTaGAATGCAGCAGATTTCTGGAATCTCAGAACTAAA +
Preference number: 3 (lower is better)
Translates to: WISMNCWVPGTM*NAADFWNLRTK
Trigger: TTTAGTTCTGAGATTCCAGAAATCTGCTGCATTTCACATGGTACCTGGAACCCAACAGTTCATGGATATCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR-3UTR CAA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCCTAGATATTGGCTCTaGGTGAATGGTTTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNPRYWL*VNGLGK
Trigger: CTTTCCTAAACCATTCACCAAGAGCCAATATCTAGG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGGGTCGGCGTCCTGGTaGGGGCTGTATCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGGSASW*GLYLAE
Trigger: CTCTGCCAGATACAGCCCTCACCAGGACGCCGACCC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCGGACGTCTGGTCGCTaGCCGCCAGGCGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGRTSGR*PPGAAS
Trigger: GCTCGCGGCGCCTGGCGGTCAGCGACCAGACGTCCG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCCATGTCCAGCTGGTTaGACCAGGGCCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRPCPAG*TRAQAL
Trigger: GAGAGCCTGGGCCCTGGTTCAACCAGCTGGACATGG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGGAGGGCTGAATCCCTaGGCCATTCCAGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGGGLNP*AIPEAA
Trigger: GGCAGCCTCTGGAATGGCTCAGGGATTCAGCCCTCC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGCTCCCCGCGCCGCTTaGGCTCGCCAGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPAPRAA*ARQALS
Trigger: GGACAGAGCCTGGCGAGCGCAAGCGGCGCGGGGAGC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCAGCAGCTCCCATCCTaGCAGTGTGCTCCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGQQLPS*QCAPSG
Trigger: CCCAGAGGGAGCACACTGCCAGGATGGGAGCTGCTG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000220244.7
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGTGCAACTCAGGGCTCTaGTCAGGGCACCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGCNSGL*SGHPAA
Trigger: GGCTGCTGGGTGCCCTGACCAGAGCCCTGAGTTGCA...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGCGCTGGGCTCTGCTTaGGCGCTAGCTCCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGALGSA*ALAPRP
Trigger: GGGCCGGGGAGCTAGCGCTCAAGCAGAGCCCAGCGC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220244.7
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTGGGGGCGCAGGATCTaGAGGGAAGCACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRWGRRI*REAPGT
Trigger: AGTTCCAGGTGCTTCCCTGCAGATCCTGCGCCCCCA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGACGGCCGCTTGTCCTTaGCAGAGGCCTCGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRTAACP*QRPRWF
Trigger: AAACCACCGAGGCCTCTGCCAAGGACAAGCGGCCGT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTTCCTGAAGCTCGTGTaGCTCACCACGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRFLKLV*LTTRPW
Trigger: CCAAGGGCGCGTGGTGAGCCACACGAGCTTCAGGAA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTCCAGTCGGGAACATTaGTGCAGTCTGGGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRSSREH*CSLGAG
Trigger: TCCGGCACCCAGACTGCATCAATGTTCCCGACTGGA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGCACTCCCAGCATaGAGCTCTCCTCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRRALPA*SSPPLS
Trigger: TGACAACGGAGGAGAGCTGCATGCTGGGAGTGCCCT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCATCCCCCACTGGTCTaGTGCCAAGAGTCACCGTCA +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGHPPLV*CQESPS
Trigger: TGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGCCTTCCCAGGCAGCTaGTGGCAGGGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGAFPGS*WQGLGD
Trigger: GTCCCCCAGCCCCTGCCAGCAGCTGCCTGGGAAGGC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGCACATGGACCTGACTaGCTGCCCTACTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGAHGPD*LPYWTA
Trigger: TGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGCACCAATGGGGAGTTaGAGCTACTGTGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGAPMGS*SYCAPR
Trigger: CCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGCAGTGTGCTCCCTCTaGGTCTGTAGCCGAGACAGT +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGAVCSL*VCSRDS
Trigger: ACTGTCTCGGCTACAGACCCAGAGGGAGCACACTGC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220244.7
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGTGGTGGTCTTGGTCATaGCCAGGGTTCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGWWSWS*PGFQGC
Trigger: GCAACCCTGGAACCCTGGCCATGACCAAGACCACCA...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCCATCCATGTCCAGCTaGTTGAACCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKPSMSS*LNQGPG
Trigger: GCCTGGGCCCTGGTTCAACCAGCTGGACATGGATGG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCGAAGACGCCCGTCTTaGACGTTTGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGRRRPS*TFASAG
Trigger: GCCTGCTGAAGCAAACGTCCAAGACGGGCGTCTTCG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAAGTCTCCTGAAAGGTaGACACGGCCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRKSPER*TRPEAG
Trigger: CCCTGCCTCTGGCCGTGTCCACCTTTCAGGAGACTT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCGGGTTTGTGTGCGCTaGGAGCAGGAGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGRVCVR*EQEGRD
Trigger: ATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGGATGGAGAGGTCCCTaGTGTATGTGGGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRGWRGP*CMWVGH
Trigger: ATGACCCACCCACATACATCAGGGACCTCTCCATCC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGCAGAATGGAGTTCCTaGAGCTCGTGTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRAEWSS*SSCGSP
Trigger: TGGTGAGCCACACGAGCTTCAGGAACTCCATTCTGC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGATGGGGATCTGTGAATaGCCAGCCCTCCAGACTACC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRMGICE*PALQTT
Trigger: GGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCAT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCWARET*AKGDPV
Trigger: TACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCAACAGAAAGGATCCTaGCATCGGGCACCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGQQKGS*HRAPRS
Trigger: TGAACGCGGTGCCCGATGGCAGGATCCTTTCTGTTG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGATCCTACCGTTGTCCTaGCTGTGTCCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRILPLS*LCPAAQ
Trigger: CTGAGCTGCAGGACACAGGCAGGACAACGGTAGGAT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATCTGGGTTCAGACCCTaGCCGCGCTCAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGSGFRP*PRSAPL
Trigger: CAGCGGGGCTGAGCGCGGCCAGGGTCTGAACCCAGA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCTAGTCTGGGAAATCTaGGTTCAGACCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKLVWEI*VQTLAA
Trigger: CGCGGCCAGGGTCTGAACCCAGATTTCCCAGACTAG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGTGCACATGGTGGTCTTaGTCATGGCCAGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGCTWWS*SWPGFQ
Trigger: CTGGAACCCTGGCCATGACCAAGACCACCATGTGCA...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAAGCCATTGGAGCCATaGACTGTGACGCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRKPLEP*TVTQRE
Trigger: CTCTCGCTGCGTCACAGTCCATGGCTCCAATGGCTT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCTCCCACCTGGGGAATaGACTCTTGGACCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKLPPGE*TLGPSL
Trigger: GAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGAG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCAGCAGCTCCCATCCTaGCAGTGTGCTCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCQQLPS*QCAPSG
Trigger: GCCACTGGGAGCACACTGCCAGGATGGGAGCTGCTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCGGACGTCTGGTCGCTaGCCGCCAGGCGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQRTSGR*PPGAAS
Trigger: GCTCGCGGCGCCTGGCGGTCAGCGACCAGACGTCCG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGCCATGCCACCTGGGTaGAGGGTCTTGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRAMPPG*RVLFRN
Trigger: ATTTCTGAACAAGACCCTTCACCCAGGTGGCATGGC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCTGTCTGGAACAATTTaGATACCCGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRLSGTI*IPGQQQ
Trigger: CTGCTGCTGCCCGGGTATTCAAATTGTTCCAGACAG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGTCCACTCCACGTCTTaGACCCACTCACTGGACAAA +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGVHSTS*THSLDK
Trigger: TTTGTCCAGTGAGTGGGTTCAAGACGTGGAGTGGAC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCGGCCCATCTTCCGTaGAGAAGCAGTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPAHLP*RSSGPK
Trigger: CTTTGGGCCACTGCTTCTTCACGGAAGATGGGCCGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGCCCTTCTGCAGGGTaGCAACCGGTTGGTATTGCT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKSPSAG*QPVGIA
Trigger: AGCAATACCAACCGGTTGTCACCCTGCAGAAGGGCT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTTCAGCAGGCGATTGTaGACATCCGAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRFSRRL*TSERME
Trigger: CTCCATCCTCTCGGATGTTCACAATCGCCTGCTGAA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTGGCTGTGCAGTCACTaGCGCCTGCGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKWLCSH*RLRSLE
Trigger: TTCCAAAGAACGCAGGCGTCAGTGACTGCACAGCCA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGAGGCTGCAGGAAAGTaGATGTTTCCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSREAAGK*MFPALA
Trigger: GGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTGGATGAAGAGCAAATaGGGCCCTAAGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRWMKSK*GPKAGA
Trigger: AGCTCCTGCCTTAGGGCCTCATTTGCTCTTCATCCA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGCTCCCCGCGCCGCTTaGGCTCGCCAGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEAPRAA*ARQALS
Trigger: GGACAGAGCCTGGCGAGCGCAAGCGGCGCGGGGAGC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGACAGCATTGCAGTCTTaGCTGGGCTTGGGGATGTAC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRTALQS*LGLGMY
Trigger: GTACATCCCCAAGCCCAGGCAAGACTGCAATGCTGT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCGTCCTCAAAGGCAATaGCGGTCACGTTGTTATGGG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRRPQRQ*RSRCYG
Trigger: CCCATAACAACGTGACCGGCATTGCCTTTGAGGACG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCCTCTCCATCCCGTGTaGGCTGGGGCACCCAGCATC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLPLHPV*AGAPSI
Trigger: GATGCTGGGTGCCCCAGCGCACACGGGATGGAGAGG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAACCCAGCAGCCACTGTaGATGTGGCCCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPTQQPL*MWPQGS
Trigger: GCTTCCCTGGGGCCACATCCACAGTGGCTGCTGGGT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGTCTTGCCTGGGCTTaGGGATGTACCCCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSLAWA*GCTPGR
Trigger: CCTACCCGGGGTACATCCCCAAGCCCAGGCAAGACT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAGGGTCCTTCCGCTATaGTCCAAGCCGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGRVLPL*SKPPGP
Trigger: GGGCCCTGGCGGCTTGGACCATAGCGGAAGGACCCT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTAGGGTCCTTCCGCTATaGTCCAAGCCGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLRVLPL*SKPPGP
Trigger: GGGCCCTGGCGGCTTGGACCATAGCGGAAGGACCCT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGGAAGGCCAGGGCGCTaGTGTGCCGGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLGRPGR*CAGPPG
Trigger: CCCTGGAGGGCCGGCACACCAGCGCCCTGGCCTTCC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCATCCATGTCCAGCTaGTTGAACCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPSMSS*LNQGPG
Trigger: GCCTGGGCCCTGGTTCAACCAGCTGGACATGGATGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGCTCACCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATGCCATCCTCTCACCACGCGCCCTTaGTTCCCGTCAATCACCACC +
Preference number: 4 (lower is better)
Translates to: GSPRALGSRQSPPPGCHPLTTRP*FPSITT
Trigger: GGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAG...AGGATGGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCAGCACTCTGGTCCATaGGCCTCTGGAGACGTATCT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKQHSGP*ASGDVS
Trigger: AGATACGTCTCCAGAGGCCCATGGACCAGAGTGCTG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGCTTTTCCAGCACTCTaGTCCATGGGCCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKAFPAL*SMGLWR
Trigger: TCTCCAGAGGCCCATGGACCAGAGTGCTGGAAAAGC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACCATCCCGTGTGCGCTaGGGCACCCAGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPPSRVR*GTQHHG
Trigger: TCCATGATGCTGGGTGCCCCAGCGCACACGGGATGG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGGTTCTTTCCCATCTTaGGGGCTCACTTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGGSFPS*GLTFPI
Trigger: GATGGGGAAAGTGAGCCCCCAAGATGGGAAAGAACC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATACCTCAGGAGTGCCTaGGCACTCTGGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPYLRSA*ALWGRL
Trigger: CAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGCAGCTGAAAGGGACTaGGGTGGACCCAATAGCTGT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKAAERD*GGPNSC
Trigger: ACAGCTATTGGGTCCACCCCAGTCCCTTTCAGCTGC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTGGGGAATGGACTCTTaGACCGAGTCTCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKWGMDS*TESHGC
Trigger: GCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCAGCAGCTCCCATCCTaGCAGTGTGCTCCCGTTGTC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCQQLPS*QCAPVV
Trigger: GACAACGGGAGCACACTGCCAGGATGGGAGCTGCTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356249.9
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCGGACGTCTGGTCGCTaGCCGCCAGGCGCCGCGAGC +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWRTSGR*PPGAAS
Trigger: GCTCGCGGCGCCTGGCGGTCAGCGACCAGACGTCCG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGTTGGGGTCGATGACATaGACAATAACTCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGLGSMT*TITPRW
Trigger: CCACCGTGGAGTTATTGTTCATGTCATCGACCCCAA...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGTCCACTCCACGTCTTaGACCCACTCACTGGACAAA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKVHSTS*THSLDK
Trigger: TTTGTCCAGTGAGTGGGTTCAAGACGTGGAGTGGAC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTCCAGTCGGGAACATTaGTGCAGTCTGGGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSSREH*CSLGAG
Trigger: TCCGGCACCCAGACTGCATCAATGTTCCCGACTGGA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACGACAGCCCTCTCGGTaGACTTGGGGTAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPRQPSR*TWGKLW
Trigger: CCACAGCTTACCCCAAGTTCACCGAGAGGGCTGTCG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGCCGGAAGCTGCCTTTaGAGCCAACGAATGCCATTT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKAGSCL*SQRMPF
Trigger: AAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGACCATGGGGATCTGTaGATGACCAGCCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCDHGDL*MTSPPD
Trigger: GTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGAGCGGCAGGGAGGGCTaGATCCCTGAGCCATTCCAG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQSGREG*IPEPFQ
Trigger: CTGGAATGGCTCAGGGATTCAGCCCTCCCTGCCGCT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTAGCGGCAGGGAGGGCTaGATCCCTGAGCCATTCCAG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLSGREG*IPEPFQ
Trigger: CTGGAATGGCTCAGGGATTCAGCCCTCCCTGCCGCT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGWARET*AKGDPV
Trigger: TACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGCTCAGTTCCCTGGATaGAGAGCAAATGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKAQFPG*RANEAL
Trigger: TAGGGCCTCATTTGCTCTTCATCCAGGGAACTGAGC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGCACCCAGGCTGGGCTaGCAGGTAGTGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCAPRLG*QVVNKV
Trigger: CACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCCTTCCCCTCCAGAATaGAGCTTTTCTCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKPSPPE*SFSLWV
Trigger: GACCCAGAGAGAAAAGCTTCATTCTGGAGGGGAAGG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACACCGCGCTGGGCTCTaGTTGAGCGCTAGCTCCCCG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQHRAGL*LSASSP
Trigger: CGGGGAGCTAGCGCTCAAGCAGAGCCCAGCGCGGTG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000220244.7
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGCTCCCCGCGCCGCTTaGGCTCGCCAGGCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIAPRAA*ARQALS
Trigger: GGACAGAGCCTGGCGAGCGCAAGCGGCGCGGGGAGC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGCCTCCTTCTGCCATaGCACCTGGGTGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSLLLP*HLGEGS
Trigger: AGACCCTTCACCCAGGTGGCATGGCAGAAGGAGGCT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAAAATAGCCTCCTTCTaGCATGCCACCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRKIASF*HATWVK
Trigger: CTTCACCCAGGTGGCATGGCAGAAGGAGGCTATTTT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAGCTCCGGCAGGCTCTaGCCCGGTCGTAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGSSGRL*PGRSKQ
Trigger: TTGCTTGCTACGACCGGGGCAGAGCCTGCCGGAGCT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGTACATTGGTTTCCCTaGCACTTTGACCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRVHWFP*HFDLVG
Trigger: CCCAACCAGGTCAAAGTGGCAGGGAAACCAATGTAC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGTTTCCTCAGATCCTaGAGCGGCACAGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGSFLRS*SGTVDE
Trigger: CTCATCAACTGTGCCGCTGCAGGATCTGAGGAAACT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCAGGGTCAGGCCAATaGCATTGTCAGCAAACCGGC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPGSGQ*HCQQTG
Trigger: GCCGGTTTGCTGACAATGGCATTGGCCTGACCCTGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGGCCAAGGGGACAAGATGAGGTTGAGCCACTTTCCTGCAGCCAAGTGGGCGCCGGATGGAGAATGTGGTaGCTCGCGGGTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RPRGQDEVEPLSCSQVGAGWRMW*LAGSRA
Trigger: GGCTCTGCTACCCGCGAGGCACCACATTCTCCATCC...GGCGCCCACTTGGCTGCAGGAAAGTGGCTCAACCTCATCTTGTCCCCTTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR GCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACCTGGAGGCCCCCTGTaGTCAGTTCCCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPPGGPL*SVPWMK
Trigger: CTTCATCCAGGGAACTGAGCACAGGGGGCCTCCAGG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAAGCTACCTCAGGAGTaGCTGGGCACTCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGKLPQE*LGTLGP
Trigger: CGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCTAGTCTGGGAAATCTaGGTTCAGACCCTGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCLVWEI*VQTLAA
Trigger: CGCGGCCAGGGTCTGAACCCAGATTTCCCAGACTAG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCGAGCTCCCGGGGCGTaGGCAAGCGGAGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPRAPGA*ASGVVA
Trigger: AGCTACCACTCCGCTTGCCCACGCCCCGGGAGCTCG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACGAGCTCCCGGGGCGTaGGCAAGCGGAGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQRAPGA*ASGVVA
Trigger: AGCTACCACTCCGCTTGCCCACGCCCCGGGAGCTCG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTACCCAGCAGCCACTGTaGATGTGGCCCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLTQQPL*MWPQGS
Trigger: GCTTCCCTGGGGCCACATCCACAGTGGCTGCTGGGT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGATGGTGAAATTGCCCTaGAAAGGGCAGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKMVKLP*KGQRAL
Trigger: GAGTGCCCTCTGCCCTTTCCAGGGCAATTTCACCAT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGAGGCCAAGACAGTaGTCAAAAGTGTTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRRRPRQ*SKVLRS
Trigger: GGAACGCAACACTTTTGACCACTGTCTTGGCCTCCT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGGAAGGTTCCACCACTaGCCAGGGTCAGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPGRFHH*PGSGQC
Trigger: GCATTGGCCTGACCCTGGCCAGTGGTGGAACCTTCC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGAGCCGTCGACGTCATaGAACACAGATGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSREPSTS*NTDVLS
Trigger: GGATAAGACATCTGTGTTCCATGACGTCGACGGCTC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTCTGGTCCCAGTGGATaGTGTAGCCCTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSGPSG*CSPSAG
Trigger: CCCTGCAGAAGGGCTACACCATCCACTGGGACCAGA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACCAGCCATCCCCCACTaGTCTGCTGCCAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPPAIPH*SAAKSH
Trigger: GTGACTCTTGGCAGCAGACCAGTGGGGGATGGCTGG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACCATCCCGTGTGCGCTaGGGCACCCAGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGPSRVR*GTQHHG
Trigger: TCCATGATGCTGGGTGCCCCAGCGCACACGGGATGG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGGACTTCACCCTCTTaGAGTCAGAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCWTSPS*SQRQGC
Trigger: GCAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCGGGTTTGTGTGCGCTaGGAGCAGGAGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCRVCVR*EQEGRD
Trigger: ATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGGCTCACCAGAAACATaGCGAGCCCTACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCGSPET*RALLPL
Trigger: CAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGGGCTCTCTATAAGGTaGGCCAGGGAGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPGLSIR*ARERAG
Trigger: CCCTGCTCTCTCCCTGGCCCACCTTATAGAGAGCCC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCTTACAGGAGCTCTTTaGGCTCTCTATAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRLTGAL*ALYKVG
Trigger: GCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
3UTR CAA 72 bp TCCCTGACAGTTGGCTCCCACCTGGGGAATGGACTCTaGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLTVGSHLGNGL*DRVSWVQLGGG
Trigger: CCCTCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTGTCAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACCGTGGCAGAAGAGGTaGGCAGCAGTGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGPWQKR*AAVSCP
Trigger: AGGGCAAGACACTGCTGCTCACCTCTTCTGCCACGG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAATCAGTACTGGCAATaGCCAGGGTATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGNQYWQ*PGYLQV
Trigger: AACCTGGAGATACCCTGGTCATTGCCAGTACTGATT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCCGGCCCATCTTCCGTaGAGAAGCAGTGGCCCAAAG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQPAHLP*RSSGPK
Trigger: CTTTGGGCCACTGCTTCTTCACGGAAGATGGGCCGG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGAATGGGTGCTCCTGGTaGGCGCCCCCTCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQNGCSW*APPPGK
Trigger: TTTACCTGGAGGGGGCGCTCACCAGGAGCACCCATT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAATGGGTGCTCCTGGTaGGCGCCCCCTCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGNGCSW*APPPGK
Trigger: TTTACCTGGAGGGGGCGCTCACCAGGAGCACCCATT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGGCTGTGCAGTCACTaGCGCCTGCGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCWLCSH*RLRSLE
Trigger: TTCCAAAGAACGCAGGCGTCAGTGACTGCACAGCCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCGACAGCCCTCTCGGTaGACTTGGGGTAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGRQPSR*TWGKLW
Trigger: CCACAGCTTACCCCAAGTTCACCGAGAGGGCTGTCG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTTTGCTCTTTCAACTTaGGACCCCTGTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKFALST*DPCLPQ
Trigger: TTGGGGCAGACAGGGGTCTCAAGTTGAAAGAGCAAA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCTCCAGGTAGACACTTaGGTAGGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQLQVDT*VGAGGS
Trigger: GCTGCCACCTGCCCCTACTCAAGTGTCTACCTGGAG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPTTQVS*YGPQTP
Trigger: GGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCAGCTCCTAATCCTGTaGGGTTGGCTCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKQLLIL*GWLLLT
Trigger: TGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCACTCAAAGTCTCCTaGAAGGTGGACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPLKVS*KVDTAR
Trigger: TCTGGCCGTGTCCACCTTTCAGGAGACTTTGAGTGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCCTGAGCCTCCCCTCTaGAATGGCACTGGCCTCCAT +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGPEPPL*NGTGLH
Trigger: ATGGAGGCCAGTGCCATTTCAGAGGGGAGGCTCAGG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGTGGGAAAGACCTCCCTaGCAGTTGGCTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQWERPP*QLAPTW
Trigger: CCAGGTGGGAGCCAACTGTCAGGGAGGTCTTTCCCA...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAAGAAGTCCTTCCTGTaGCTCTGGCCTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKKKSFL*LWPLKQ
Trigger: CTGCTTCAAAGGCCAGAGTCACAGGAAGGACTTCTT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGCACCTGGAACTCTTCTaGCTGGTACATGGAGTAATC +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRHLELF*LVHGVI
Trigger: GATTACTCCATGTACCAGGCAGAAGAGTTCCAGGTG...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGTGGGGGCGCAGGATCTaGAGGGAAGCACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQWGRRI*REAPGT
Trigger: AGTTCCAGGTGCTTCCCTGCAGATCCTGCGCCCCCA...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGCCCTCCAAGTGTGCTaGCTTAAATCCCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKALQVC*LKSQSK
Trigger: TTTGCTCTGGGATTTAAGGCAGCACACTTGGAGGGC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGGTGGACACAGCATTaGAGTCTTGCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCRWTQH*SLAWAW
Trigger: CCAAGCCCAGGCAAGACTGCAATGCTGTGTCCACCT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGGGATGGAGAATGTGGTaGCTCGCGGGTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQGWRMW*LAGSRA
Trigger: GGCTCTGCTACCCGCGAGGCACCACATTCTCCATCC...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACCTCTCCATCCCGTGTaGGCTGGGGCACCCAGCATC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQPLHPV*AGAPSI
Trigger: GATGCTGGGTGCCCCAGCGCACACGGGATGGAGAGG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAATGGACCTGACTGCCTaGCCTACTGGACTGCAGACC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPMDLTA*PTGLQT
Trigger: GGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCAT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCCTGGAGGCCCCCTGTaGTCAGTTCCCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLPGGPL*SVPWMK
Trigger: CTTCATCCAGGGAACTGAGCACAGGGGGCCTCCAGG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGGAGCCCTACTCCCTCTaGTGGGCCTCACCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQEPYSL*WASPVE
Trigger: CTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTC...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTGTGCTCCCGTTGTCCTaGCTGTGTCCTGCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGVLPLS*LCPAAQ
Trigger: CTGAGCTGCAGGACACAGGCAGGACAACGGGAGCAC...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356249.9
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATCTGGGTTCAGACCCTaGCCGCGCTCAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSESGFRP*PRSAPL
Trigger: CAGCGGGGCTGAGCGCGGCCAGGGTCTGAACCCAGA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGACAATCGGCTCGTCGTaGTCTTTAATGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGTIGSS*SLMTSL
Trigger: CAAGCTGGTCATTAAAGACCACGACGAGCCGATTGT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGACAATCGGCTCGTCGTaGTCTTTAATGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRTIGSS*SLMTSL
Trigger: CAAGCTGGTCATTAAAGACCACGACGAGCCGATTGT...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCTGCAGGGAAGCACCTaGAACTCTTCTGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCLQGST*NSSAWY
Trigger: GTACCAGGCAGAAGAGTTCCAGGTGCTTCCCTGCAG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGAGTCTTGCCTGGGCTTaGGGATGTACCCCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQSLAWA*GCTPGR
Trigger: CCTACCCGGGGTACATCCCCAAGCCCAGGCAAGACT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGAAGGCCAGGGCGCTaGTGTGCCGGCCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGRPGR*CAGPPG
Trigger: CCCTGGAGGGCCGGCACACCAGCGCCCTGGCCTTCC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGAGCCGTCGACGTCATaGAACACAGATGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKEPSTS*NTDVLS
Trigger: GGATAAGACATCTGTGTTCCATGACGTCGACGGCTC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATGCCATCCTCCGAACAGAGGATGGAGAATGTaGTGCCTCGCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: PRALGSRQSPPPGCHPPNRGWRM*CLAGSR
Trigger: TCTGCTACCCGCGAGGCACCACATTCTCCATCCTCT...GTTCGGAGGATGGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR CCA 90 bp CCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATGCCATCCTCCGAACGAACATCCGAGAGGATaGAGAATGTGGTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: PRALGSRQSPPPGCHPPNEHPRG*RMWCLA
Trigger: CGCGAGGCACCACATTCTCCATCCTCTCGGATGTTC...GTTCGGAGGATGGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCTCACCACGCGCCCTTaGTTCCCGTCAATCACCACC +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQLTTRP*FPSITT
Trigger: GGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTGACTGCCTGCCCTACTaGACTGCAGACCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLDCLPY*TADPSS
Trigger: GCTTGAGGGGTCTGCAGTCCAGTAGGGCAGGCAGTC...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGGAGCTCACTTCTGTaGACTTCACCCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKRSSLL*TSPSWS
Trigger: ACTCCAAGAGGGTGAAGTCCACAGAAGTGAGCTCCT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGGGGCTCTCTATAAGGTaGGCCAGGGAGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQGLSIR*ARERAG
Trigger: CCCTGCTCTCTCCCTGGCCCACCTTATAGAGAGCCC...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGACCGAGTGATGGGTaGAATTTCATCCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGRPSDG*NFILGT
Trigger: AGTGCCAAGGATGAAATTCCACCCATCACTCGGTCT...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCAGCTTGCCTCCCTCTaGGATGTGGATGGAATAGAC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCQLASL*DVDGID
Trigger: GTCTATTCCATCCACATCTCAGAGGGAGGCAAGCTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGGAGGGCTGAATCCCTaGGCCATTCCAGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQGGLNP*AIPEAA
Trigger: GGCAGCCTCTGGAATGGCTCAGGGATTCAGCCCTCC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATGGGCCAGAGAGACGTaGGCAAAGGGCGACCCCGTA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQWARET*AKGDPV
Trigger: TACGGGGTCGCCCTTTGCTCACGTCTCTCTGGCCCA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACCCATTGCTCCCCTCTaGCCACACTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPPIAPL*PHFSIM
Trigger: CATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAGGGCACTCCCAGCATaGAGCTCTCCTCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGRALPA*SSPPLS
Trigger: TGACAACGGAGGAGAGCTGCATGCTGGGAGTGCCCT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGCTTTTTCTGTCCATaGAACTCAAGAGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKSFFCP*NSRAPP
Trigger: AGGAGGCGCTCTTGAGTTGCATGGACAGAAAAAGCT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGCTCCGGCAGGCTCTaGCCCGGTCGTAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQSSGRL*PGRSKQ
Trigger: TTGCTTGCTACGACCGGGGCAGAGCCTGCCGGAGCT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAGCTGCTGTCCCATATaGTTCAGCTCCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGSCCPI*FSSVPS
Trigger: GGAGGGCACGGAGCTGAAGCATATGGGACAGCAGCT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTACAGCATTGCAGTCTTaGCTGGGCTTGGGGATGTAC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCTALQS*LGLGMY
Trigger: GTACATCCCCAAGCCCAGGCAAGACTGCAATGCTGT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCATCCCCCACTGGTCTaGTGCCAAGAGTCACCGTCA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGHPPLV*CQESPS
Trigger: TGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGCACATGGACCTGACTaGCTGCCCTACTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGAHGPD*LPYWTA
Trigger: TGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGACTCTGGTGCCTCGTaGAAGATTATAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGDSGAS*KIINHR
Trigger: TCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATGGTGGTCTTGGTCATaGCCAGGGTTCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGWWSWS*PGFQGC
Trigger: GCAACCCTGGAACCCTGGCCATGACCAAGACCACCA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAAGCAGTGTCTTGCCCTaGCCGATATGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPSSVLP*PICTWW
Trigger: CCACCATGTGCATATCGGCCAGGGCAAGACACTGCT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTCAAACCGGTCAGAATaGATGACTGTGCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRSNRSE*MTVPDL
Trigger: CAAATCAGGCACAGTCATCCATTCTGACCGGTTTGA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACTGCAGGGAAGCACCTaGAACTCTTCTGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPLQGST*NSSAWY
Trigger: GTACCAGGCAGAAGAGTTCCAGGTGCTTCCCTGCAG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTCTTTATCTCTTGCTTaGAGCCGTCGTCATACGGGA +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKSLSLA*SRRHTG
Trigger: TCCCGTATGACGACGGCTCCAAGCAAGAGATAAAGA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTTCTGGTCCCAGTGGATaGTGTAGCCCTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGSGPSG*CSPSAG
Trigger: CCCTGCAGAAGGGCTACACCATCCACTGGGACCAGA...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAAGAGGATGGAGAATGTaGTGCCTCGCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPRGWRM*CLAGSR
Trigger: TCTGCTACCCGCGAGGCACCACATTCTCCATCCTCT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGGCCAAGGGGACAAGATGAGGTTGAGCCACTTTCCTGCAGCCAAGTGGGCGCCAGAGGATGGAGAATGTaGTGCCTCGCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: RPRGQDEVEPLSCSQVGARGWRM*CLAGSR
Trigger: TCTGCTACCCGCGAGGCACCACATTCTCCATCCTCT...GGCGCCCACTTGGCTGCAGGAAAGTGGCTCAACCTCATCTTGTCCCCTTGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGTTGAAAAGCTGCCATaGTATGCCTTGCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRVEKLP*YALQNG
Trigger: TCCATTCTGCAAGGCATACCATGGCAGCTTTTCAAC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGGTCCATGGGCCTCTaGAGACGTATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCWSMGL*RRIFPL
Trigger: CAAAGGGAAGATACGTCTCCAGAGGCCCATGGACCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACAGCACTCTGGTCCATaGGCCTCTGGAGACGTATCT +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPQHSGP*ASGDVS
Trigger: AGATACGTCTCCAGAGGCCCATGGACCAGAGTGCTG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGTCTTCACCACAGGGATaGGCACAACTTGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRSSPQG*AQLGRF
Trigger: AAATCTTCCAAGTTGTGCCCATCCCTGTGGTGAAGA...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGCCTCTGAAATGGCACTaGCCTCCATTTTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKPLKWH*PPFYLS
Trigger: AGAGAGGTAAAATGGAGGCCAGTGCCATTTCAGAGG...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTGGACTTCACCCTCTTaGAGTCAGAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLWTSPS*SQRQGC
Trigger: GCAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCA...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATACCTCAGGAGTGCCTaGGCACTCTGGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQYLRSA*ALWGRL
Trigger: CAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCGGGTTTGTGTGCGCTaGGAGCAGGAGGGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLRVCVR*EQEGRD
Trigger: ATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGGCTCACCAGAAACATaGCGAGCCCTACTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGGSPET*RALLPL
Trigger: CAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATGGGGAATGGACTCTTaGACCGAGTCTCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPWGMDS*TESHGC
Trigger: GCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACAGTTGGCTCCCACCTaGGGAATGGACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGQLAPT*GMDSWT
Trigger: GGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGGACATTCAACATTCCTaGCCACCTGAAAGTGATCAC +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGDIQHS*PPESDH
Trigger: GTGATCACTTTCAGGTGGCCAGGAATGTTGAATGTC...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGAGCCTCGATGTCCATaGTATTCAATATGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKEPRCP*YSIWSS
Trigger: GGAAGACCATATTGAATATCATGGACATCGAGGCTC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACAGCGAGAGAATGTATaGTGGATGGAGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPQRENV*WMERSL
Trigger: CAGGGACCTCTCCATCCATCATACATTCTCTCGCTG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAAGGCCACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGCCCGTTGGTACGTGGTaGAAAATAAACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: EGHRDRQHQGEGGFVCAGPVGTW*KINQNP
Trigger: TGGATTTTGGTTTATTTTTCACCACGTACCAACGGG...CCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTGGCCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTAGCCCTTCTGCAGGGTaGCAACCGGTTGGTATTGCT +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLSPSAG*QPVGIA
Trigger: AGCAATACCAACCGGTTGTCACCCTGCAGAAGGGCT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTATGGGGATCTGTGAATaGCCAGCCCTCCAGACTACC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGMGICE*PALQTT
Trigger: GGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCAT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACAGTGCACATGGACCTaGCTGCCTGCCCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQQCTWT*LPALLD
Trigger: GTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLSKKPS*ASPLKW
Trigger: CCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCCCATTGCTCCCCTCTaGCCACACTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLPIAPL*PHFSIM
Trigger: CATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCCCATTGCTCCCCTCTaGCCACACTTCTCCATCATG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQPIAPL*PHFSIM
Trigger: CATGATGGAGAAGTGTGGTCAGAGGGGAGCAATGGG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATGGGAAAGACCTCCCTaGCAGTTGGCTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQWERPP*QLAPTW
Trigger: CCAGGTGGGAGCCAACTGTCAGGGAGGTCTTTCCCA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTTGTCAATCAGGATGTaGCGGGTTCGCAAAACAATC +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKLSIRM*RVRKTI
Trigger: GATTGTTTTGCGAACCCGGCACATCCTGATTGACAA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAAAATAGCCTCCTTCTaGCATGCCACCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCKIASF*HATWVK
Trigger: CTTCACCCAGGTGGCATGGCAGAAGGAGGCTATTTT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGTACATTGGTTTCCCTaGCACTTTGACCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCVHWFP*HFDLVG
Trigger: CCCAACCAGGTCAAAGTGGCAGGGAAACCAATGTAC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGCCCTCCAAGTGTGCTaGCTTAAATCCCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCALQVC*LKSQSK
Trigger: TTTGCTCTGGGATTTAAGGCAGCACACTTGGAGGGC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACGTGCCCTCCAAGTGTaGTGCCTTAAATCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGRALQV*CLKSQS
Trigger: GCTCTGGGATTTAAGGCAGCACACTTGGAGGGCACG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTATGCTTCAGCTCCGTaGCCTCCAAGTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLYASAP*PPSVLP
Trigger: AGGCAGCACACTTGGAGGGCACGGAGCTGAAGCATA...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGTATGCTTCAGCTCCGTaGCCTCCAAGTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQYASAP*PPSVLP
Trigger: AGGCAGCACACTTGGAGGGCACGGAGCTGAAGCATA...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGAGGTGGACACAGCATTaGAGTCTTGCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQRWTQH*SLAWAW
Trigger: CCAAGCCCAGGCAAGACTGCAATGCTGTGTCCACCT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGTTTCCTCAGATCCTaGAGCGGCACAGTTGATGAG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSFLRS*SGTVDE
Trigger: CTCATCAACTGTGCCGCTGCAGGATCTGAGGAAACT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGTGCATAGCACCCACTaGAAATGGCCCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGVHSTH*KWPLSS
Trigger: ACTGGAGAGGGGCCATTTGCAGTGGGTGCTATGCAC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CTCGTGTGGCTCACCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATGTCCACTTTGTCCATCTaGAAGGTCCTCACGAAGACG +
Preference number: 4 (lower is better)
Translates to: LVWLTTRPWFPSITTTWMSTLSI*KVLTKT
Trigger: CGTCTTCGTGAGGACCTTGCAGATGGACAAAGTGGA...CATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAGCCACACGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR GCA 90 bp CACCACGCGCCCTTGGTTCCCGTCAATCACCACCACCTGGATGCCATCCTCCGACAGAGGTGGAAGAAGTaGTGCTTGGAACTCTCCATC +
Preference number: 4 (lower is better)
Translates to: HHAPLVPVNHHHLDAILRQRWKK*CLELSI
Trigger: GATGGAGAGTTCCAAGCAGCACTTCTTCCACCTCTG...TCGGAGGATGGCATCCAGGTGGTGGTGATTGACGGGAACCAAGGGCGCGTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCTTGAGACCCCTGTCTaGCCCAAGCTTTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGLETPV*PKLFQH
Trigger: GTGCTGGAAAAGCTTGGGGCAGACAGGGGTCTCAAG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTT +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPSSKAH*SPLTTL
Trigger: AAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAAGCTACCTCAGGAGTaGCTGGGCACTCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEKLPQE*LGTLGP
Trigger: CGGCCCCAGAGTGCCCAGGCACTCCTGAGGTAGCTT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATCTGGGTTCAGACCCTaGCCGCGCTCAGCCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSGFRP*PRSAPL
Trigger: CAGCGGGGCTGAGCGCGGCCAGGGTCTGAACCCAGA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACGAGCTCCCGGGGCGTaGGCAAGCGGAGTGGTAGCT +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGRAPGA*ASGVVA
Trigger: AGCTACCACTCCGCTTGCCCACGCCCCGGGAGCTCG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTGCAACTCAGGGCTCTaGTCAGGGCACCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSACNSGL*SGHPAA
Trigger: GGCTGCTGGGTGCCCTGACCAGAGCCCTGAGTTGCA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCCGATATGCACATGGTaGTCTTGGTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQPICTW*SWSWPG
Trigger: CCCTGGCCATGACCAAGACCACCATGTGCATATCGG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATGGCCGATATGCACATaGTGGTCTTGGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPWPICT*WSWSWP
Trigger: TGGCCATGACCAAGACCACCATGTGCATATCGGCCA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCTCTGAGATGTGGATaGAATAGACCGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPLRCG*NRPWQK
Trigger: CTTCTGCCACGGTCTATTCCATCCACATCTCAGAGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAATGGTGAAATTGCCCTaGAAAGGGCAGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPMVKLP*KGQRAL
Trigger: GAGTGCCCTCTGCCCTTTCCAGGGCAATTTCACCAT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATTCTGCCATGCCACCTaGGTGAAGGGTCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPFCHAT*VKGLVQ
Trigger: CTGAACAAGACCCTTCACCCAGGTGGCATGGCAGAA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCTGATGTATGTGGGTaGGTCATAACCTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPDVCG*VITSPF
Trigger: GAAAGGGGAGGTTATGACCCACCCACATACATCAGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCACGGAGGGGCCCGTTaGTACGTGGTGAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCHGGAR*YVVKNK
Trigger: TTTATTTTTCACCACGTACCAACGGGCCCCTCCGTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGCCAGCCCGGTAGTTaGAATGTGCTCGGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCCQPGS*NVLGCY
Trigger: ATAACAACCGAGCACATTCCAACTACCGGGCTGGCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGGAAGGTTCCACCACTaGCCAGGGTCAGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPGRFHH*PGSGQC
Trigger: GCATTGGCCTGACCCTGGCCAGTGGTGGAACCTTCC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACCGGTCACGTTGTTATaGGGGCAGCTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQPVTLL*GQLCQA
Trigger: TGCCTGGCAGAGCTGCCCCCATAACAACGTGACCGG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAAGAGGATGGAGAATGTaGTGCCTCGCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGRGWRM*CLAGSR
Trigger: TCTGCTACCCGCGAGGCACCACATTCTCCATCCTCT...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTGAACATCCGAGAGGATaGAGAATGTGGTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLEHPRG*RMWCLA
Trigger: CGCGAGGCACCACATTCTCCATCCTCTCGGATGTTC...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACAGGGACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGGACGCCTGCGTTCTTTaGAATCAGAGCTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: HRDRQHQGEGGFVCAGSRDACVL*NQSFNL
Trigger: AAGATTAAAGCTCTGATTCCAAAGAACGCAGGCGTC...CCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGTCCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCCAGCCATCCCCCACTaGTCTGCTGCCAAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPPAIPH*SAAKSH
Trigger: GTGACTCTTGGCAGCAGACCAGTGGGGGATGGCTGG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGAATGTTTCCAGCATTaGCCAGCACCGCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQECFQH*PAPPQG
Trigger: CCCCTGGGGCGGTGCTGGCCAATGCTGGAAACATTC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACCTCCCTTAGCTGTGTaGTTCTTTCCCATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPPPLAV*FFPILG
Trigger: CCCCAAGATGGGAAAGAACCACACAGCTAAGGGAGG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPSAWAL*GRLLRQ
Trigger: TTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCCCTACTCCCTCTGCTaGGCCTCACCTGTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPPYSLC*ASPVEL
Trigger: CAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGACCTCCCTGACAGTTaGCTCCCACCTGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQDLPDS*LPPGEW
Trigger: CCATTCCCCAGGTGGGAGCCAACTGTCAGGGAGGTC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCAGCGAGAGAATGTATaGTGGATGGAGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGQRENV*WMERSL
Trigger: CAGGGACCTCTCCATCCATCATACATTCTCTCGCTG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTTGTATCTGGCAGAGATaGTTGAGAGGAACGGCCGCT +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGCIWQR*LRGTAA
Trigger: AGCGGCCGTTCCTCTCAATCATCTCTGCCAGATACA...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGGTCGGCGTCCTGGTaGGGGCTGTATCTGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGSASW*GLYLAE
Trigger: CTCTGCCAGATACAGCCCTCACCAGGACGCCGACCC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTTCAGCAGGCGATTGTaGACATCCGAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLFSRRL*TSERME
Trigger: CTCCATCCTCTCGGATGTTCACAATCGCCTGCTGAA...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGTTCCAGGTACCATGTaGAATGCAGCAGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCVPGTM*NAADFW
Trigger: CCAGAAATCTGCTGCATTTCACATGGTACCTGGAAC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAACAGTGCACATGGACCTaGCTGCCTGCCCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEQCTWT*LPALLD
Trigger: GTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTG...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASGAGC*GNVVWQ
Trigger: CTGCCACACCACATTGCCTCAACAACCGGCCCCAGA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGCATTAAGCAGCAGCTaGAAGGGACTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQALSSS*KGLGWT
Trigger: GGTCCACCCCAGTCCCTTTCAGCTGCTGCTTAATGC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGCCTTCCCCTCCAGAATaGAGCTTTTCTCTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQPSPPE*SFSLWV
Trigger: GACCCAGAGAGAAAAGCTTCATTCTGGAGGGGAAGG...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTAGGCAGATCGGGGCATaGAAATCCTACCGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLRQIGA*KSYRCP
Trigger: AGGACAACGGTAGGATTTTCATGCCCCGATCTGCCT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCCCATCCTGGCAGTGTaGTCCCTCTGGGTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAPILAV*SLWVCS
Trigger: GCTACAGACCCAGAGGGAGCACACTGCCAGGATGGG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000220244.7
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTAGCCTCCTTCTGCCATaGCACCTGGGTGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPSLLLP*HLGEGS
Trigger: AGACCCTTCACCCAGGTGGCATGGCAGAAGGAGGCT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGGTGCAGGAAGTGTTTaGTTCCCAATTTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCGAGSV*FPIWSS
Trigger: CGATGACCAAATTGGGAAGCAAACACTTCCTGCACC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCACCTGGAACTCTTCTaGCTGGTACATGGAGTAATC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCHLELF*LVHGVI
Trigger: GATTACTCCATGTACCAGGCAGAAGAGTTCCAGGTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGCTGCTGTCCCATATaGTTCAGCTCCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQSCCPI*FSSVPS
Trigger: GGAGGGCACGGAGCTGAAGCATATGGGACAGCAGCT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCCAGGGTCAGGCCAATaGCATTGTCAGCAAACCGGC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPPGSGQ*HCQQTG
Trigger: GCCGGTTTGCTGACAATGGCATTGGCCTGACCCTGG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTTTTCCGTCCCCACGTTaGCACTCTCGCCAACAAACA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGFPSPR*HSRQQT
Trigger: TGTTTGTTGGCGAGAGTGGCAACGTGGGGACGGAAA...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGCCATGGTATGCCTTaGAGAATGGAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCCHGMP*RMEFLK
Trigger: CTTCAGGAACTCCATTCTGCAAGGCATACCATGGCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGCACATGGACCTGACTaGCTGCCCTACTGGACTGCA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQAHGPD*LPYWTA
Trigger: TGCAGTCCAGTAGGGCAGGCAGTCAGGTCCATGTGC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGCACCAATGGGGAGTTaGAGCTACTGTGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPAPMGS*SYCAPR
Trigger: CCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGAGCCCTACTCCCTCTaGTGGGCCTCACCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEEPYSL*WASPVE
Trigger: CTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGTGCTACCAAGAAAATaGCTAGATATTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKVLPRK*LDIGSW
Trigger: CCAAGAGCCAATATCTAGGCATTTTCTTGGTAGCAC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAGTGGCTTCCCCAGCTaGCACAACTCAAGGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSESGFPS*HNSRPG
Trigger: GCCTGGCCTTGAGTTGTGGCAGCTGGGGAAGCCACT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCCCATCCTGGCAGTGTaGTCCCAGTGGCTTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIPILAV*SQWLPQ
Trigger: CTGGGGAAGCCACTGGGAGCACACTGCCAGGATGGG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAACAGCCACTGTGGATGTaGCCCCAGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEQPLWM*PQGSRS
Trigger: TGACCTGCTTCCCTGGGGCCACATCCACAGTGGCTG...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTACCCAGCAGCCACTGTaGATGTGGCCCCAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVITQQPL*MWPQGS
Trigger: GCTTCCCTGGGGCCACATCCACAGTGGCTGCTGGGT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGTTCTGCCATGCCACCTaGGTGAAGGGTCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQFCHAT*VKGLVQ
Trigger: CTGAACAAGACCCTTCACCCAGGTGGCATGGCAGAA...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTCGCCATGCTCTGTCTaGAACAATTTGAATACCCGG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSPCSV*NNLNTR
Trigger: CCGGGTATTCAAATTGTTCCAGACAGAGCATGGCGA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCCTGCCACTTTGACCTaGTTGGGGGCGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLPATLT*LGAQDL
Trigger: CAGATCCTGCGCCCCCAACCAGGTCAAAGTGGCAGG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCCTGCCACTTTGACCTaGTTGGGGGCGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAPATLT*LGAQDL
Trigger: CAGATCCTGCGCCCCCAACCAGGTCAAAGTGGCAGG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAAGGAGGCCAAGACAGTaGTCAAAAGTGTTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPRRPRQ*SKVLRS
Trigger: GGAACGCAACACTTTTGACCACTGTCTTGGCCTCCT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACATTGCAGTCTTGCCTaGGCTTGGGGATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQHCSLA*AWGCTP
Trigger: CGGGGTACATCCCCAAGCCCAGGCAAGACTGCAATG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATGGCCATCCAGAAGGTaGACACAGCATTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPWPSRR*TQHCSL
Trigger: AAGACTGCAATGCTGTGTCCACCTTCTGGATGGCCA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACACGGAGGGGCCCGTTaGTACGTGGTGAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPHGGAR*YVVKNK
Trigger: TTTATTTTTCACCACGTACCAACGGGCCCCTCCGTG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATGCCAGCCCGGTAGTTaGAATGTGCTCGGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPCQPGS*NVLGCY
Trigger: ATAACAACCGAGCACATTCCAACTACCGGGCTGGCA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTCATTCGCAGGTTACTaGTCTTGTAGGCTTGAATGT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKSFAGY*SCRLEC
Trigger: ACATTCAAGCCTACAAGACCAGTAACCTGCGAATGA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGGACGCCTGCGTTCTTTaGAATCAGAGCTTTAATCTT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKDACVL*NQSFNL
Trigger: AAGATTAAAGCTCTGATTCCAAAGAACGCAGGCGTC...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTTCCTGAAGCTCGTGTaGCTCACCACGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAFLKLV*LTTRPW
Trigger: CCAAGGGCGCGTGGTGAGCCACACGAGCTTCAGGAA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCTGATAGCCTTCCCTTaGCCCATCAGGGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGLIAFP*PIRAET
Trigger: TGTTTCAGCCCTGATGGGCCAAGGGAAGGCTATCAG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTGGGCACCCAGCATCATaGATATCAGTGGATATCCAT +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCGHPAS*ISVDIH
Trigger: ATGGATATCCACTGATATCCATGATGCTGGGTGCCC...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAAGGAGCTCACTTCTGTaGACTTCACCCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPRSSLL*TSPSWS
Trigger: ACTCCAAGAGGGTGAAGTCCACAGAAGTGAGCTCCT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCAAGATCAGCCAAATTaGCTCACCAGAAACATGGCG +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCQDQPN*LTRNMA
Trigger: CGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCCGTGGCAGAAGAGGTaGGCAGCAGTGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIPWQKR*AAVSCP
Trigger: AGGGCAAGACACTGCTGCTCACCTCTTCTGCCACGG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAGCTTTCCAGAGGTCTaGAATTTTCTCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCSFPEV*NFLPTF
Trigger: AAAGGTGGGGAGAAAATTTCAGACCTCTGGAAAGCT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACCATGTCCAGCTGGTTaGACCAGGGCCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERPCPAG*TRAQAL
Trigger: GAGAGCCTGGGCCCTGGTTCAACCAGCTGGACATGG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAGTTGTCATTCTTCGTaGGGTAGGAGCCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGSCHSS*GRSQGT
Trigger: AGTACCCTGGCTCCTACCTCACGAAGAATGACAACT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGTGGTCGCCACATAGTTaGAAAGCTGCCATGGTATGC +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQWSPHS*KAAMVC
Trigger: GCATACCATGGCAGCTTTTCAACTATGTGGCGACCA...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSETTQVS*YGPQTP
Trigger: GGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGCACCCAGGCTGGGCTaGCAGGTAGTGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLAPRLG*QVVNKV
Trigger: CACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTTGGGAAAGACCTCCCTaGCAGTTGGCTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIWERPP*QLAPTW
Trigger: CCAGGTGGGAGCCAACTGTCAGGGAGGTCTTTCCCA...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTAAGAAGTCCTTCCTGTaGCTCTGGCCTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGKKSFL*LWPLKQ
Trigger: CTGCTTCAAAGGCCAGAGTCACAGGAAGGACTTCTT...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTAAGTGGTTCACAGTGTaGGACCCTTGCATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCKWFTV*DPCIRR
Trigger: TCTTCTAATGCAAGGGTCTCACACTGTGAACCACTT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCAACAGAAAGGATCCTaGCATCGGGCACCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPQQKGS*HRAPRS
Trigger: TGAACGCGGTGCCCGATGGCAGGATCCTTTCTGTTG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTATCAATGGGACGATTaGATATTTTTCCTGGGTGAG +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKYQWDD*IFFLGE
Trigger: CTCACCCAGGAAAAATATGCAATCGTCCCATTGATA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGAGCTCCGGCAGGCTCTaGCCCGGTCGTAGCAAGCAA +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWSSGRL*PGRSKQ
Trigger: TTGCTTGCTACGACCGGGGCAGAGCCTGCCGGAGCT...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGCCCTCCAAGTGTGCTaGCTTAAATCCCAGAGCAAA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGALQVC*LKSQSK
Trigger: TTTGCTCTGGGATTTAAGGCAGCACACTTGGAGGGC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGAGTGGTCAAAAGTGTTaGGTTCCTCCGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQSGQKC*VPPAHL
Trigger: AAGATGGGCCGGAGGAACGCAACACTTTTGACCACT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCCAGGGTCAGGCCAATaGCATTGTCAGCAAACCGGC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAPGSGQ*HCQQTG
Trigger: GCCGGTTTGCTGACAATGGCATTGGCCTGACCCTGG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCTGTTCTTTATCTCTTaGTTGGAGCCGTCGTCATAC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCLFFIS*LEPSSY
Trigger: GTATGACGACGGCTCCAAGCAAGAGATAAAGAACAG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTTTATGGGGGCAGCTCTaGCAGGCATTATTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPLWGQL*QALFRR
Trigger: CCGCCTGAATAATGCCTGGCAGAGCTGCCCCCATAA...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTTCCACTTTGTCCATCTaGAAGGTCCTCACGAAGACG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGSTLSI*KVLTKT
Trigger: CGTCTTCGTGAGGACCTTGCAGATGGACAAAGTGGA...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTCACCACCACCTGGATaGCATCCTCCGAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSPPPG*HPPNWG
Trigger: ACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACCACCTGGATGCCATCCTCCGAACTGGGGTACTTCTTCCCATCCACTTCAATTCACCACCACCTGGATaGCATCCTCCGAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: HHLDAILRTGVLLPIHFNSPPPG*HPPNWG
Trigger: ACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGA...ATTGAAGTGGATGGGAAGAAGTACCCCAGTTCGGAGGATGGCATCCAGGTGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR GCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCCAACGAATGCCATTTaGTCTTTCAACTTGAGACCC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCPTNAI*SFNLRP
Trigger: GGGTCTCAAGTTGAAAGAGCAAATGGCATTCGTTGG...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGAKVDL*CQHNPG
Trigger: ACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGC...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCCTCTCCATCCCGTGTaGGCTGGGGCACCCAGCATC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHPLHPV*AGAPSI
Trigger: GATGCTGGGTGCCCCAGCGCACACGGGATGGAGAGG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTATGGACCTGACTGCCTaGCCTACTGGACTGCAGACC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAMDLTA*PTGLQT
Trigger: GGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCAT...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAGTCAGAGGCAGGGCTaGCTGGGGACTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSQRQG*LGTEFL
Trigger: GAGGAATTCAGTCCCCAGGCAGCCCTGCCTCTGACT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGCAGTGTCTTGCCCTaGCCGATATGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQSSVLP*PICTWW
Trigger: CCACCATGTGCATATCGGCCAGGGCAAGACACTGCT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTAGCAGTGTCTTGCCCTaGCCGATATGCACATGGTGG +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPSSVLP*PICTWW
Trigger: CCACCATGTGCATATCGGCCAGGGCAAGACACTGCT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCTGCAGGGAAGCACCTaGAACTCTTCTGCCTGGTAC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPLQGST*NSSAWY
Trigger: GTACCAGGCAGAAGAGTTCCAGGTGCTTCCCTGCAG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGGAAGGTTCCACCACTaGCCAGGGTCAGGCCAATGC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIGRFHH*PGSGQC
Trigger: GCATTGGCCTGACCCTGGCCAGTGGTGGAACCTTCC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATCTTTATCTCTTGCTTaGAGCCGTCGTCATACGGGA +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPSLSLA*SRRHTG
Trigger: TCCCGTATGACGACGGCTCCAAGCAAGAGATAAAGA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAAGGGTCCTTCCGCTATaGTCCAAGCCGCCAGGGCCC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKRVLPL*SKPPGP
Trigger: GGGCCCTGGCGGCTTGGACCATAGCGGAAGGACCCT...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGAGCCGTCGACGTCATaGAACACAGATGTCTTATCC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGEPSTS*NTDVLS
Trigger: GGATAAGACATCTGTGTTCCATGACGTCGACGGCTC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTCTGGTCCCAGTGGATaGTGTAGCCCTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASGPSG*CSPSAG
Trigger: CCCTGCAGAAGGGCTACACCATCCACTGGGACCAGA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGAACATCCGAGAGGATaGAGAATGTGGTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPEHPRG*RMWCLA
Trigger: CGCGAGGCACCACATTCTCCATCCTCTCGGATGTTC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGCTTTTCCAGCACTCTaGTCCATGGGCCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQAFPAL*SMGLWR
Trigger: TCTCCAGAGGCCCATGGACCAGAGTGCTGGAAAAGC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGAATGTTTCCAGCATTaGCCAGCACCGCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIECFQH*PAPPQG
Trigger: CCCCTGGGGCGGTGCTGGCCAATGCTGGAAACATTC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAAGTCTCCTGAAAGGTaGACACGGCCAGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEKSPER*TRPEAG
Trigger: CCCTGCCTCTGGCCGTGTCCACCTTTCAGGAGACTT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTGGACTTCACCCTCTTaGAGTCAGAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLWTSPS*SQRQGC
Trigger: GCAGCCCTGCCTCTGACTCCAAGAGGGTGAAGTCCA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGCAGCTGAAAGGGACTaGGGTGGACCCAATAGCTGT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPAAERD*GGPNSC
Trigger: ACAGCTATTGGGTCCACCCCAGTCCCTTTCAGCTGC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCAGTTGGCTCCCACCTaGGGAATGGACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAQLAPT*GMDSWT
Trigger: GGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGACCTCCCTGACAGTTaGCTCCCACCTGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIDLPDS*LPPGEW
Trigger: CCATTCCCCAGGTGGGAGCCAACTGTCAGGGAGGTC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCCGTGGCAGAAGAGGTaGGCAGCAGTGTCTTGCCCT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWPWQKR*AAVSCP
Trigger: AGGGCAAGACACTGCTGCTCACCTCTTCTGCCACGG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTACCGGTCAGAATGGATaGCTGTGCCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPTGQNG*LCLIWG
Trigger: ACCCCAAATCAGGCACAGTCATCCATTCTGACCGGT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATCTCCCCCATCACTATaGTGTTCCGGCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSESPPSL*CSGSEA
Trigger: GGCTTCTGAGCCGGAACATCATAGTGATGGGGGAGA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACAGCGAGAGAATGTATaGTGGATGGAGAGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQQRENV*WMERSL
Trigger: CAGGGACCTCTCCATCCATCATACATTCTCTCGCTG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTTGGAGCCATGGACTGTaGCGCAGCGAGAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPWSHGL*RSERMY
Trigger: ATACATTCTCTCGCTGCGTCACAGTCCATGGCTCCA...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATGTATCTGGCAGAGATaGTTGAGAGGAACGGCCGCT +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQCIWQR*LRGTAA
Trigger: AGCGGCCGTTCCTCTCAATCATCTCTGCCAGATACA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTTGCAGTTTTGGATGTTaGTGGGGCCATCATATAACT +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCCSFGC*WGHHIT
Trigger: AGTTATATGATGGCCCCATCAACATCCAAAACTGCA...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACCATGTCCAGCTGGTTaGACCAGGGCCCAGGCTCTC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKPCPAG*TRAQAL
Trigger: GAGAGCCTGGGCCCTGGTTCAACCAGCTGGACATGG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCAGGAACAACAGCCCTaGGTCCTCGTCCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAQEQQP*VLVPVV
Trigger: TACTACTGGGACGAGGACTCAGGGCTGTTGTTCCTG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGCAGAATGGAGTTCCTaGAGCTCGTGTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEAEWSS*SSCGSP
Trigger: TGGTGAGCCACACGAGCTTCAGGAACTCCATTCTGC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAGACGTATCTTCCCTTTaGTGCCATAAGCACTATGGA +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPDVSSL*CHKHYG
Trigger: TCCATAGTGCTTATGGCATCAAAGGGAAGATACGTC...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAAAGATTTTGGCTTTGTaGTCCTCAGTGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPKILAL*SSVSSV
Trigger: GACACTGGACACTGAGGATCACAAAGCCAAAATCTT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGAGGCTGCAGGAAAGTaGATGTTTCCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPEAAGK*MFPALA
Trigger: GGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTCCCCAAACCCCCACTaGAGAGGCACAGATAGGAGA +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSPNPH*RGTDRR
Trigger: TCTCCTATCTGTGCCTCTTCAGTGGGGGTTTGGGGA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTACAACCCAGGTCTCCTaGTATGGTCCCCAAACCCCC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVITTQVS*YGPQTP
Trigger: GGGGGTTTGGGGACCATATCAGGAGACCTGGGTTGT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAATGGGGATCTGTGAATaGCCAGCCCTCCAGACTACC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEMGICE*PALQTT
Trigger: GGTAGTCTGGAGGGCTGGTCATTCACAGATCCCCAT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCAGTGCACATGGACCTaGCTGCCTGCCCTACTGGAC +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWQCTWT*LPALLD
Trigger: GTCCAGTAGGGCAGGCAGTCAGGTCCATGTGCACTG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSKKPS*ASPLKW
Trigger: CCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAACACACTTCTCCATCATaGGTGGGCCAGAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEHTSPS*VGQRDV
Trigger: CACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTG...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSGAGC*GNVVWQ
Trigger: CTGCCACACCACATTGCCTCAACAACCGGCCCCAGA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTATGCTTCAGCTCCGTaGCCTCCAAGTGTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLYASAP*PPSVLP
Trigger: AGGCAGCACACTTGGAGGGCACGGAGCTGAAGCATA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTTATGGGGGCAGCTCTaGCAGGCATTATTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLLWGQL*QALFRR
Trigger: CCGCCTGAATAATGCCTGGCAGAGCTGCCCCCATAA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGATGGAGAATGTGGTaGCTCGCGGGTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGWRMW*LAGSRA
Trigger: GGCTCTGCTACCCGCGAGGCACCACATTCTCCATCC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTAGTAGTAGTGGCTCCTaGCAGGGTAGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASSSGS*QGSSAP
Trigger: TGGAGCAGAGCTACCCTGGCAGGAGCCACTACTACT...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGCAGTCACTGACGCCTaGGTTCTTTGGAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPAVTDA*VLWNQS
Trigger: GCTCTGATTCCAAAGAACGCAGGCGTCAGTGACTGC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAAGGTGGAAGAAGTGCTaGTTGGAACTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGRWKKC*LELSIF
Trigger: GAAGATGGAGAGTTCCAAGCAGCACTTCTTCCACCT...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGTTTGAAGCCAACGAATaGCATTTGCTCTTTCAACTT +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKFEANE*HLLFQL
Trigger: AAGTTGAAAGAGCAAATGGCATTCGTTGGCTTCAAA...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTGTCCAAGTCCAAACCTaGCACTCAAAGTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGVQVQT*HSKSPE
Trigger: TTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGAC...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTATGGACCTGACTGCCTaGCCTACTGGACTGCAGACC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIMDLTA*PTGLQT
Trigger: GGTCTGCAGTCCAGTAGGGCAGGCAGTCAGGTCCAT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGGTGGTCTTGGTCATaGCCAGGGTTCCAGGGTTGC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQWWSWS*PGFQGC
Trigger: GCAACCCTGGAACCCTGGCCATGACCAAGACCACCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAACCGATATGCACATGGTaGTCTTGGTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEPICTW*SWSWPG
Trigger: CCCTGGCCATGACCAAGACCACCATGTGCATATCGG...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTTCGCCATGCTCTGTCTaGAACAATTTGAATACCCGG +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGSPCSV*NNLNTR
Trigger: CCGGGTATTCAAATTGTTCCAGACAGAGCATGGCGA...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTATTGCATATTTTTCCTaGGTGAGCTTTCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GRAGLCALGAGGKRSASCIAYFS*VSFPEV
Trigger: GACCTCTGGAAAGCTCACCCAGGAAAAATATGCAAT...ACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCCTGCCACTTTGACCTaGTTGGGGGCGCAGGATCTG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWPATLT*LGAQDL
Trigger: CAGATCCTGCGCCCCCAACCAGGTCAAAGTGGCAGG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTGATGTGCAGGTACATTaGTTTCCCTGCCACTTTGAC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGDVQVH*FPCHFD
Trigger: GTCAAAGTGGCAGGGAAACCAATGTACCTGCACATC...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGAGAGCAAACTTGATGTaGCCCCCAAAGGTATCGAAG +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQRANLM*PPKVSK
Trigger: CTTCGATACCTTTGGGGGCCACATCAAGTTTGCTCT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAAGCCATTGGAGCCATaGACTGTGACGCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEKPLEP*TVTQRE
Trigger: CTCTCGCTGCGTCACAGTCCATGGCTCCAATGGCTT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAAGCCATTGGAGCCATaGACTGTGACGCAGCGAGAG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLKPLEP*TVTQRE
Trigger: CTCTCGCTGCGTCACAGTCCATGGCTCCAATGGCTT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAGTCTTGCCTGGGCTTaGGGATGTACCCCGGGTAGG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSLAWA*GCTPGR
Trigger: CCTACCCGGGGTACATCCCCAAGCCCAGGCAAGACT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCATTGCAGTCTTGCCTaGGCTTGGGGATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQHCSLA*AWGCTP
Trigger: CGGGGTACATCCCCAAGCCCAGGCAAGACTGCAATG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCGGAAAGTGCAGTTTTaGATGTTGATGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGRKVQF*MLMGPS
Trigger: TGATGGCCCCATCAACATCCAAAACTGCACTTTCCG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCCGGTCACGTTGTTATaGGGGCAGCTCTGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWPVTLL*GQLCQA
Trigger: TGCCTGGCAGAGCTGCCCCCATAACAACGTGACCGG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACCATCCATGTCCAGCTaGTTGAACCAGGGCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGPSMSS*LNQGPG
Trigger: GCCTGGGCCCTGGTTCAACCAGCTGGACATGGATGG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAACATTGATGCAGTCTaGGTGCCGGACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQNIDAV*VPDQPV
Trigger: AACTGGCTGGTCCGGCACCCAGACTGCATCAATGTT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAGAGGATGGAGAATGTaGTGCCTCGCGGGTAGCAGA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSERGWRM*CLAGSR
Trigger: TCTGCTACCCGCGAGGCACCACATTCTCCATCCTCT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCGAAGACGCCCGTCTTaGACGTTTGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIRRRPS*TFASAG
Trigger: GCCTGCTGAAGCAAACGTCCAAGACGGGCGTCTTCG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CACCTGGATGCCATCCTCCGAACTGGGGTACTTCTTCCCATCCACTTCAATGTACGAAGACGCCCGTCTTaGACGTTTGCTTCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: HLDAILRTGVLLPIHFNVRRRPS*TFASAG
Trigger: GCCTGCTGAAGCAAACGTCCAAGACGGGCGTCTTCG...TACATTGAAGTGGATGGGAAGAAGTACCCCAGTTCGGAGGATGGCATCCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCTCACCACGCGCCCTTaGTTCCCGTCAATCACCACC +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWLTTRP*FPSITT
Trigger: GGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACTCACCACGCGCCCTTaGTTCCCGTCAATCACCACC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGLTTRP*FPSITT
Trigger: GGTGGTGATTGACGGGAACCAAGGGCGCGTGGTGAG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATTCCTGAAGCTCGTGTaGCTCACCACGCGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGFLKLV*LTTRPW
Trigger: CCAAGGGCGCGTGGTGAGCCACACGAGCTTCAGGAA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGAATGTTTCCAGCATTaGCCAGCACCGCCCCAGGGG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERECFQH*PAPPQG
Trigger: CCCCTGGGGCGGTGCTGGCCAATGCTGGAAACATTC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCGCCAACACCAAGGGGAGGGCGGGTTTGTGTGCGCTGGGAGCAGGAGGGAAGAATGCAGCAGATTTCTaGAATCTCAGAACTAAAAGG +
Preference number: 4 (lower is better)
Translates to: TANTKGRAGLCALGAGGKNAADF*NLRTKR
Trigger: CCTTTTAGTTCTGAGATTCCAGAAATCTGCTGCATT...CTTCCCTCCTGCTCCCAGCGCACACAAACCCGCCCTCCCCTTGGTGTTGGCGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCCATCCCGTGTGCGCTaGGGCACCCAGCATCATGGA +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHPSRVR*GTQHHG
Trigger: TCCATGATGCTGGGTGCCCCAGCGCACACGGGATGG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTACATCTAGGGTCTCCTaGAGGCCCCCTGTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVITSRVS*RPPVLS
Trigger: ACTGAGCACAGGGGGCCTCCAGGAGACCCTAGATGT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAGTGCCTGGGCACTCTaGGGCCGGTTGTTGAGGCAA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSAWAL*GRLLRQ
Trigger: TTGCCTCAACAACCGGCCCCAGAGTGCCCAGGCACT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAATACCTCAGGAGTGCCTaGGCACTCTGGGGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKYLRSA*ALWGRL
Trigger: CAACCGGCCCCAGAGTGCCCAGGCACTCCTGAGGTA...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACCCTACTCCCTCTGCTaGGCCTCACCTGTAGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGPYSLC*ASPVEL
Trigger: CAGCTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGACCCAGGGAGACTCTaGTGCCTCGTGCAAGATTAT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPDPGRL*CLVQDY
Trigger: ATAATCTTGCACGAGGCACCAGAGTCTCCCTGGGTC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCTCCCACCTGGGGAATaGACTCTTGGACCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVILPPGE*TLGPSL
Trigger: GAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGAG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCAGTTGGCTCCCACCTaGGGAATGGACTCTTGGACC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIQLAPT*GMDSWT
Trigger: GGTCCAAGAGTCCATTCCCCAGGTGGGAGCCAACTG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGCCATGCCACCTGGGTaGAGGGTCTTGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAAMPPG*RVLFRN
Trigger: ATTTCTGAACAAGACCCTTCACCCAGGTGGCATGGC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATAATGGGTGCTCCTGGTaGGCGCCCCCTCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHNGCSW*APPPGK
Trigger: TTTACCTGGAGGGGGCGCTCACCAGGAGCACCCATT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCAGGAACAACAGCCCTaGGTCCTCGTCCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIQEQQP*VLVPVV
Trigger: TACTACTGGGACGAGGACTCAGGGCTGTTGTTCCTG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCATCCTTTGTTTTCAGCTaGGAACCAAAGAGCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPSFVFS*EPKSFL
Trigger: CAAGAAGCTCTTTGGTTCTCAGCTGAAAACAAAGGA...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATGGTCGCCACATAGTTaGAAAGCTGCCATGGTATGC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQWSPHS*KAAMVC
Trigger: GCATACCATGGCAGCTTTTCAACTATGTGGCGACCA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGACGTATCTTCCCTTTaGTGCCATAAGCACTATGGA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGDVSSL*CHKHYG
Trigger: TCCATAGTGCTTATGGCATCAAAGGGAAGATACGTC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATTTGCTCTTTCAACTTaGGACCCCTGTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQFALST*DPCLPQ
Trigger: TTGGGGCAGACAGGGGTCTCAAGTTGAAAGAGCAAA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCTCCAGGTAGACACTTaGGTAGGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHLQVDT*VGAGGS
Trigger: GCTGCCACCTGCCCCTACTCAAGTGTCTACCTGGAG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGAGGCTGCAGGAAAGTaGATGTTTCCAGCATTGGCC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAEAAGK*MFPALA
Trigger: GGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACAGCTCCTAATCCTGTaGGGTTGGCTCTTGCTTACA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQQLLIL*GWLLLT
Trigger: TGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCACACTTCTCCATCATaGGTGGGCCAGAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQHTSPS*VGQRDV
Trigger: CACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATGGATGAAGAGCAAATaGGGCCCTAAGGCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEWMKSK*GPKAGA
Trigger: AGCTCCTGCCTTAGGGCCTCATTTGCTCTTCATCCA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTCTGGGGCCGGTTGTTaGGGCAATGTGGTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHSGAGC*GNVVWQ
Trigger: CTGCCACACCACATTGCCTCAACAACCGGCCCCAGA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGGCACCCAGGCTGGGCTaGCAGGTAGTGAACAAAGTG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWAPRLG*QVVNKV
Trigger: CACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGC...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGCATTAAGCAGCAGCTaGAAGGGACTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERALSSS*KGLGWT
Trigger: GGTCCACCCCAGTCCCTTTCAGCTGCTGCTTAATGC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACAGGCAGGCCCTCTTTaGAGGAAAGAGTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQQAGPL*RKEFVV
Trigger: AACCACAAACTCTTTCCTTCAAAGAGGGCCTGCCTG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATTGCCCTGGCCGATATaGACATGGTGGTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSELPWPI*TWWSWS
Trigger: TGACCAAGACCACCATGTGCATATCGGCCAGGGCAA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTTGCCCTGGCCGATATaGACATGGTGGTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLLPWPI*TWWSWS
Trigger: TGACCAAGACCACCATGTGCATATCGGCCAGGGCAA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAAGCCTCCTTCTGCCATaGCACCTGGGTGAAGGGTCT +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERSLLLP*HLGEGS
Trigger: AGACCCTTCACCCAGGTGGCATGGCAGAAGGAGGCT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGACCTTCATCATTCACTaGAACAGAAAGGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQTFIIH*NRKDPA
Trigger: GGCAGGATCCTTTCTGTTGCAGTGAATGATGAAGGT...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTGTCTAAATCCAAGGTaGAGGAAGTGTTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLCLNPR*RKCLLP
Trigger: GGGAAGCAAACACTTCCTGCACCTTGGATTTAGACA...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGTACATTGGTTTCCCTaGCACTTTGACCTGGTTGGG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQVHWFP*HFDLVG
Trigger: CCCAACCAGGTCAAAGTGGCAGGGAAACCAATGTAC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTATCTCCTCCCCGATGTaGAGGTACATTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPISSPM*RYIGFP
Trigger: AGGGAAACCAATGTACCTGCACATCGGGGAGGAGAT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCGTGCCCTCCAAGTGTaGTGCCTTAAATCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIRALQV*CLKSQS
Trigger: GCTCTGGGATTTAAGGCAGCACACTTGGAGGGCACG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGAGCTGCTGTCCCATATaGTTCAGCTCCGTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWSCCPI*FSSVPS
Trigger: GGAGGGCACGGAGCTGAAGCATATGGGACAGCAGCT...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTCATCTTGCACATCTTaGTGTCACGGTCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASSCTS*CHGPRG
Trigger: TCCCCTCGGACCGTGACAGCAAGATGTGCAAGATGA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAACAGCATTGCAGTCTTaGCTGGGCTTGGGGATGTAC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSETALQS*LGLGMY
Trigger: GTACATCCCCAAGCCCAGGCAAGACTGCAATGCTGT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCGTCCTCAAAGGCAATaGCGGTCACGTTGTTATGGG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLRPQRQ*RSRCYG
Trigger: CCCATAACAACGTGACCGGCATTGCCTTTGAGGACG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAGGATGGAGAATGTGGTaGCTCGCGGGTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKGWRMW*LAGSRA
Trigger: GGCTCTGCTACCCGCGAGGCACCACATTCTCCATCC...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCAGAGGTGGAAGAAGTaGTGCTTGGAACTCTCCATC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPQRWKK*CLELSI
Trigger: GATGGAGAGTTCCAAGCAGCACTTCTTCCACCTCTG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGATCACCACCACCTGGATaGCATCCTCCGAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERSPPPG*HPPNWG
Trigger: ACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGA...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTCACCACCACCTGGATaGCATCCTCCGAACTGGGGT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWSPPPG*HPPNWG
Trigger: ACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCCAACGAATGCCATTTaGTCTTTCAACTTGAGACCC +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGPTNAI*SFNLRP
Trigger: GGGTCTCAAGTTGAAAGAGCAAATGGCATTCGTTGG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCCAACGAATGCCATTTaGTCTTTCAACTTGAGACCC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLPTNAI*SFNLRP
Trigger: GGGTCTCAAGTTGAAAGAGCAAATGGCATTCGTTGG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGCCTTCCCAGGCAGCTaGTGGCAGGGGCTGGGGGAC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNAFPGS*WQGLGD
Trigger: GTCCCCCAGCCCCTGCCAGCAGCTGCCTGGGAAGGC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTGACTCTGGTGCCTCGTaGAAGATTATAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGDSGAS*KIINHR
Trigger: TCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTC...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACAGCCACTGTGGATGTaGCCCCAGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKQPLWM*PQGSRS
Trigger: TGACCTGCTTCCCTGGGGCCACATCCACAGTGGCTG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGCACATGGTGGTCTTaGTCATGGCCAGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQCTWWS*SWPGFQ
Trigger: CTGGAACCCTGGCCATGACCAAGACCACCATGTGCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTTGCACATGGTGGTCTTaGTCATGGCCAGGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVICTWWS*SWPGFQ
Trigger: CTGGAACCCTGGCCATGACCAAGACCACCATGTGCA...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTGGCCGATATGCACATaGTGGTCTTGGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAWPICT*WSWSWP
Trigger: TGGCCATGACCAAGACCACCATGTGCATATCGGCCA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACCTCTGAGATGTGGATaGAATAGACCGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQPLRCG*NRPWQK
Trigger: CTTCTGCCACGGTCTATTCCATCCACATCTCAGAGG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGATGGTGAAATTGCCCTaGAAAGGGCAGAGGGCACTC +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLMVKLP*KGQRAL
Trigger: GAGTGCCCTCTGCCCTTTCCAGGGCAATTTCACCAT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATCAAACCGGTCAGAATaGATGACTGTGCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGSNRSE*MTVPDL
Trigger: CAAATCAGGCACAGTCATCCATTCTGACCGGTTTGA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCAATTGCATATTTTTCCTaGGTGAGCTTTCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPIAYFS*VSFPEV
Trigger: GACCTCTGGAAAGCTCACCCAGGAAAAATATGCAAT...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCTTCTGCCTGGTACATaGAGTAATCAGTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLLLPGT*SNQYWQ
Trigger: TTGCCAGTACTGATTACTCCATGTACCAGGCAGAAG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACCTGATGTATGTGGGTaGGTCATAACCTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQPDVCG*VITSPF
Trigger: GAAAGGGGAGGTTATGACCCACCCACATACATCAGG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGGAGGCCAAGACAGTaGTCAAAAGTGTTGCGTTCC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQRRPRQ*SKVLRS
Trigger: GGAACGCAACACTTTTGACCACTGTCTTGGCCTCCT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACATTGCAGTCTTGCCTaGGCTTGGGGATGTACCCCG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERHCSLA*AWGCTP
Trigger: CGGGGTACATCCCCAAGCCCAGGCAAGACTGCAATG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATACGGCCGCTTGTCCTTaGCAGAGGCCTCGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHTAACP*QRPRWF
Trigger: AAACCACCGAGGCCTCTGCCAAGGACAAGCGGCCGT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CTCTGCTGGGCCTCACCTGTAGAGCTGCAGAGACAGGAGAGCCAGGTAGCACCACTAATTGGAAAATTCTaGCCTATAGGGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: LCWASPVELQRQESQVAPLIGKF*PIGRVL
Trigger: AAGGACCCTCCCTATAGGCCAGAATTTTCCAATTAG...TGGTGCTACCTGGCTCTCCTGTCTCTGCAGCTCTACAGGTGAGGCCCAGCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGGTTGAAAAGCTGCCATaGTATGCCTTGCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQVEKLP*YALQNG
Trigger: TCCATTCTGCAAGGCATACCATGGCAGCTTTTCAAC...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTGGTCCATGGGCCTCTaGAGACGTATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAWSMGL*RRIFPL
Trigger: CAAAGGGAAGATACGTCTCCAGAGGCCCATGGACCA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTGGTCCATGGGCCTCTaGAGACGTATCTTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLWSMGL*RRIFPL
Trigger: CAAAGGGAAGATACGTCTCCAGAGGCCCATGGACCA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGCTTTTCCAGCACTCTaGTCCATGGGCCTCTGGAGA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIAFPAL*SMGLWR
Trigger: TCTCCAGAGGCCCATGGACCAGAGTGCTGGAAAAGC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCTGATAGCCTTCCCTTaGCCCATCAGGGCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLLIAFP*PIRAET
Trigger: TGTTTCAGCCCTGATGGGCCAAGGGAAGGCTATCAG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAACATCTAGGGTCTCCTaGAGGCCCCCTGTGCTCAGT +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGTSRVS*RPPVLS
Trigger: ACTGAGCACAGGGGGCCTCCAGGAGACCCTAGATGT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAGGGCTCTCTATAAGGTaGGCCAGGGAGAGAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKGLSIR*ARERAG
Trigger: CCCTGCTCTCTCCCTGGCCCACCTTATAGAGAGCCC...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGACCCAGGGAGACTCTaGTGCCTCGTGCAAGATTAT +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEDPGRL*CLVQDY
Trigger: ATAATCTTGCACGAGGCACCAGAGTCTCCCTGGGTC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAGAAAGAGTTTGTGGTTaGGGCAGGAAAGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGERVCG*GRKGDK
Trigger: TTTATCCCCTTTCCTGCCCCAACCACAAACTCTTTC...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGACCTCCCTGACAGTTaGCTCCCACCTGGGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHDLPDS*LPPGEW
Trigger: CCATTCCCCAGGTGGGAGCCAACTGTCAGGGAGGTC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAGCAGTGTGCTCCCAGTaGCTTCCCCAGCTGCCACAA +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKAVCSQ*LPQLPQ
Trigger: TTGTGGCAGCTGGGGAAGCCACTGGGAGCACACTGC...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCAGCTTGCCTCCCTCTaGGATGTGGATGGAATAGAC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQQLASL*DVDGID
Trigger: GTCTATTCCATCCACATCTCAGAGGGAGGCAAGCTG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTACCGGTCAGAATGGATaGCTGTGCCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVITGQNG*LCLIWG
Trigger: ACCCCAAATCAGGCACAGTCATCCATTCTGACCGGT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGGGATGGAGAGGTCCCTaGTGTATGTGGGTGGGTCAT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWGWRGP*CMWVGH
Trigger: ATGACCCACCCACATACATCAGGGACCTCTCCATCC...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGGAGCCATGGACTGTaGCGCAGCGAGAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQWSHGL*RSERMY
Trigger: ATACATTCTCTCGCTGCGTCACAGTCCATGGCTCCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAGTTGTCATTCTTCGTaGGGTAGGAGCCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSCHSS*GRSQGT
Trigger: AGTACCCTGGCTCCTACCTCACGAAGAATGACAACT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTCCAGTCGGGAACATTaGTGCAGTCTGGGTGCCGGA +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHSSREH*CSLGAG
Trigger: TCCGGCACCCAGACTGCATCAATGTTCCCGACTGGA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAAGCCCTTCTGCAGGGTaGCAACCGGTTGGTATTGCT +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERSPSAG*QPVGIA
Trigger: AGCAATACCAACCGGTTGTCACCCTGCAGAAGGGCT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCAGGAACAACAGCCCTaGGTCCTCGTCCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWQEQQP*VLVPVV
Trigger: TACTACTGGGACGAGGACTCAGGGCTGTTGTTCCTG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATGGCTGTGCAGTCACTaGCGCCTGCGTTCTTTGGAA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGWLCSH*RLRSLE
Trigger: TTCCAAAGAACGCAGGCGTCAGTGACTGCACAGCCA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGGCAGAATGGAGTTCCTaGAGCTCGTGTGGCTCACCA +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWAEWSS*SSCGSP
Trigger: TGGTGAGCCACACGAGCTTCAGGAACTCCATTCTGC...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTTTGCTCTTTCAACTTaGGACCCCTGTCTGCCCCAA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAFALST*DPCLPQ
Trigger: TTGGGGCAGACAGGGGTCTCAAGTTGAAAGAGCAAA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGCCGGAAGCTGCCTTTaGAGCCAACGAATGCCATTT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIAGSCL*SQRMPF
Trigger: AAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGACCATGGGGATCTGTaGATGACCAGCCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHDHGDL*MTSPPD
Trigger: GTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCCACTCAAAGTCTCCTaGAAGGTGGACACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWPLKVS*KVDTAR
Trigger: TCTGGCCGTGTCCACCTTTCAGGAGACTTTGAGTGG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAAGCAAGAAGCCTTCCTaGGCCTCCCCTCTGAAATGG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERSKKPS*ASPLKW
Trigger: CCATTTCAGAGGGGAGGCTCAGGAAGGCTTCTTGCT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCACACTTCTCCATCATaGGTGGGCCAGAGAGACGTG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWHTSPS*VGQRDV
Trigger: CACGTCTCTCTGGCCCACTCATGATGGAGAAGTGTG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGGCTCAGTTCCCTGGATaGAGAGCAAATGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQAQFPG*RANEAL
Trigger: TAGGGCCTCATTTGCTCTTCATCCAGGGAACTGAGC...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGCATTAAGCAGCAGCTaGAAGGGACTGGGGTGGACC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHALSSS*KGLGWT
Trigger: GGTCCACCCCAGTCCCTTTCAGCTGCTGCTTAATGC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAACAGGCAGGCCCTCTTTaGAGGAAAGAGTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEQAGPL*RKEFVV
Trigger: AACCACAAACTCTTTCCTTCAAAGAGGGCCTGCCTG...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTGGACAAGAAGGACATaGGGTCATTTTAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLWTRRT*GHFNSP
Trigger: AGGAGAGTTAAAATGACCTCATGTCCTTCTTGTCCA...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTTGCCCTGGCCGATATaGACATGGTGGTCTTGGTCA +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQLPWPI*TWWSWS
Trigger: TGACCAAGACCACCATGTGCATATCGGCCAGGGCAA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATAGGGCACTCCCAGCATaGAGCTCTCCTCCGTTGTCA +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHRALPA*SSPPLS
Trigger: TGACAACGGAGGAGAGCTGCATGCTGGGAGTGCCCT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACAACAGAAAGGATCCTaGCATCGGGCACCGCGTTCA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGQQKGS*HRAPRS
Trigger: TGAACGCGGTGCCCGATGGCAGGATCCTTTCTGTTG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAGTGGTCAAAAGTGTTaGGTTCCTCCGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSGQKC*VPPAHL
Trigger: AAGATGGGCCGGAGGAACGCAACACTTTTGACCACT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTTTCCGTCCCCACGTTaGCACTCTCGCCAACAAACA +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQFPSPR*HSRQQT
Trigger: TGTTTGTTGGCGAGAGTGGCAACGTGGGGACGGAAA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATTATGGGGGCAGCTCTaGCAGGCATTATTCAGGCGG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGLWGQL*QALFRR
Trigger: CCGCCTGAATAATGCCTGGCAGAGCTGCCCCCATAA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGTGCATAGCACCCACTaGAAATGGCCCCTCTCCAGT +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGVHSTH*KWPLSS
Trigger: ACTGGAGAGGGGCCATTTGCAGTGGGTGCTATGCAC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACTTCTTCCCATCCACTTCAATGTAAGCGAAGTCGTTCCAGAGGTGGAAGAAGTGGATGGAGAATGTGGTaGCTCGCGGGTAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: TSSHPLQCKRSRSRGGRSGWRMW*LAGSRA
Trigger: GGCTCTGCTACCCGCGAGGCACCACATTCTCCATCC...ACTTCTTCCACCTCTGGAACGACTTCGCTTACATTGAAGTGGATGGGAAGAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGTCCACTTTGTCCATCTaGAAGGTCCTCACGAAGACG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLSTLSI*KVLTKT
Trigger: CGTCTTCGTGAGGACCTTGCAGATGGACAAAGTGGA...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAGTAGTAGTGGCTCCTaGCAGGGTAGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSSSGS*QGSSAP
Trigger: TGGAGCAGAGCTACCCTGGCAGGAGCCACTACTACT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGGTGGAAGAAGTGCTaGTTGGAACTCTCCATCTTC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQRWKKC*LELSIF
Trigger: GAAGATGGAGAGTTCCAAGCAGCACTTCTTCCACCT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACTTGAGACCCCTGTCTaGCCCAAGCTTTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGLETPV*PKLFQH
Trigger: GTGCTGGAAAAGCTTGGGGCAGACAGGGGTCTCAAG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTTCTCCACCTGGCATTaGAGTGCACATGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQFSTWH*SAHGPD
Trigger: GTCAGGTCCATGTGCACTGCAATGCCAGGTGGAGAA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTAGCAGCAAAGCCCATTaGTCCCCTCTGACCACACTT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVISSKAH*SPLTTL
Trigger: AAGTGTGGTCAGAGGGGAGCAATGGGCTTTGCTGCT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACCAGGGAGACTCTGGTaGCTCGTGCAAGATTATAAA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQPGRLW*LVQDYK
Trigger: TTTATAATCTTGCACGAGGCACCAGAGTCTCCCTGG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCCGATATGCACATGGTaGTCTTGGTCATGGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWPICTW*SWSWPG
Trigger: CCCTGGCCATGACCAAGACCACCATGTGCATATCGG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGGCCGATATGCACATaGTGGTCTTGGTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQWPICT*WSWSWP
Trigger: TGGCCATGACCAAGACCACCATGTGCATATCGGCCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTACCGCGTTCAAATACTaGACCAGACGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPTAFKY*TRRSLS
Trigger: AGAGAGTGAACGTCTGGTCCAGTATTTGAACGCGGT...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATGGTCATCGCCTTCCTaGCCATGTCATCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEWSSPS*PCHPDF
Trigger: GAAATCTGGATGACATGGCCAGGAAGGCGATGACCA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTGGTCATCGCCTTCCTaGCCATGTCATCCAGATTTC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAWSSPS*PCHPDF
Trigger: GAAATCTGGATGACATGGCCAGGAAGGCGATGACCA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGAATTGCATATTTTTCCTaGGTGAGCTTTCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGIAYFS*VSFPEV
Trigger: GACCTCTGGAAAGCTCACCCAGGAAAAATATGCAAT...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTGGCCATCCAGAAGGTaGACACAGCATTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAWPSRR*TQHCSL
Trigger: AAGACTGCAATGCTGTGTCCACCTTCTGGATGGCCA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAATGCCAGCCCGGTAGTTaGAATGTGCTCGGTTGTTAT +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSECQPGS*NVLGCY
Trigger: ATAACAACCGAGCACATTCCAACTACCGGGCTGGCA...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCTAATTGGAAAATTCTaGCCTATAGGGAGGGTCCTT +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGLIGKF*PIGRVL
Trigger: AAGGACCCTCCCTATAGGCCAGAATTTTCCAATTAG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTTCATTCGCAGGTTACTaGTCTTGTAGGCTTGAATGT +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLSFAGY*SCRLEC
Trigger: ACATTCAAGCCTACAAGACCAGTAACCTGCGAATGA...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAAACCAAAGAGCTTCTTaGGCATCGGCACGTCTACGA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSENQRAS*ASARLR
Trigger: TCGTAGACGTGCCGATGCCCAAGAAGCTCTTTGGTT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAAGTCGTTCCAGAGGTaGAAGAAGTGCTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQKSFQR*KKCCLE
Trigger: TTCCAAGCAGCACTTCTTCCACCTCTGGAACGACTT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ATCACCACCACCTGGATGCCATCCTCCGAACTGGGGTACTTCTTCCCATCCACTAAGTCGTTCCAGAGGTaGAAGAAGTGCTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: ITTTWMPSSELGYFFPSTKSFQR*KKCCLE
Trigger: TTCCAAGCAGCACTTCTTCCACCTCTGGAACGACTT...AGTGGATGGGAAGAAGTACCCCAGTTCGGAGGATGGCATCCAGGTGGTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR CCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCCTCTGAAATGGCACTaGCCTCCATTTTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPPLKWH*PPFYLS
Trigger: AGAGAGGTAAAATGGAGGCCAGTGCCATTTCAGAGG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTGCCTCCCCTCTGAAATaGCACTGGCCTCCATTTTAC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIASPLK*HWPPFY
Trigger: GTAAAATGGAGGCCAGTGCCATTTCAGAGGGGAGGC...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGGCAGCTGAAAGGGACTaGGGTGGACCCAATAGCTGT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWAAERD*GGPNSC
Trigger: ACAGCTATTGGGTCCACCCCAGTCCCTTTCAGCTGC...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCTTACAGGAGCTCTTTaGGCTCTCTATAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSALTGAL*ALYKVG
Trigger: GCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAACCGGTCAGAATGGATaGCTGTGCCTGATTTGGGGT +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERTGQNG*LCLIWG
Trigger: ACCCCAAATCAGGCACAGTCATCCATTCTGACCGGT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACTGTCTGGAACAATTTaGATACCCGGGCAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERLSGTI*IPGQQQ
Trigger: CTGCTGCTGCCCGGGTATTCAAATTGTTCCAGACAG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCATATTTTTCCTGGGTaGGCTTTCCAGAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPHIFPG*AFQRSE
Trigger: TTCAGACCTCTGGAAAGCTCACCCAGGAAAAATATG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAACATATTTTTCCTGGGTaGGCTTTCCAGAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQHIFPG*AFQRSE
Trigger: TTCAGACCTCTGGAAAGCTCACCCAGGAAAAATATG...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTAATCAGTACTGGCAATaGCCAGGGTATCTCCAGGTT +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSANQYWQ*PGYLQV
Trigger: AACCTGGAGATACCCTGGTCATTGCCAGTACTGATT...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTCTCCCCCATCACTATaGTGTTCCGGCTCAGAAGCC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHSPPSL*CSGSEA
Trigger: GGCTTCTGAGCCGGAACATCATAGTGATGGGGGAGA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTGGAGCCATGGACTGTaGCGCAGCGAGAGAATGTAT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWWSHGL*RSERMY
Trigger: ATACATTCTCTCGCTGCGTCACAGTCCATGGCTCCA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGGGTAGGAGTCCTCTGTaGTCATCTTGCACATCTTGC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQGRSPL*SSCTSC
Trigger: GCAAGATGTGCAAGATGATCACAGAGGACTCCTACC...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTGTATCTGGCAGAGATaGTTGAGAGGAACGGCCGCT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWCIWQR*LRGTAA
Trigger: AGCGGCCGTTCCTCTCAATCATCTCTGCCAGATACA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTAGTTGTCATTCTTCGTaGGGTAGGAGCCAGGGTACT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVISCHSS*GRSQGT
Trigger: AGTACCCTGGCTCCTACCTCACGAAGAATGACAACT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CATCCTCCGAACTGGGGTACTTCTTCCCATCCACTTCAATGTAAGCGAAGTCGTTTCAGCAGGCGATTGTaGACATCCGAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: HPPNWGTSSHPLQCKRSRFSRRL*TSERME
Trigger: CTCCATCCTCTCGGATGTTCACAATCGCCTGCTGAA...ACGACTTCGCTTACATTGAAGTGGATGGGAAGAAGTACCCCAGTTCGGAGGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGTGGTCGCCACATAGTTaGAAAGCTGCCATGGTATGC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQWSPHS*KAAMVC
Trigger: GCATACCATGGCAGCTTTTCAACTATGTGGCGACCA...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAAGATTTTGGCTTTGTaGTCCTCAGTGTCCAGTGTC +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQKILAL*SSVSSV
Trigger: GACACTGGACACTGAGGATCACAAAGCCAAAATCTT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGCTATATTTCCAGCTCTaGAATCCCAGGCCGAGGGAG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWLYFQL*NPRPRE
Trigger: CTCCCTCGGCCTGGGATTTCAGAGCTGGAAATATAG...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTCTTGCATTAGAAGAGTaGAAACTCAACAAAACCGTG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLLALEE*KLNKTV
Trigger: CACGGTTTTGTTGAGTTTTCACTCTTCTAATGCAAG...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACTTGCATTAGAAGAGTaGAAACTCAACAAAACCGTG +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGLALEE*KLNKTV
Trigger: CACGGTTTTGTTGAGTTTTCACTCTTCTAATGCAAG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTACAGATCCTGTACTGTaGAACATATGTACAACTCTG +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLTDPVL*NICTTL
Trigger: CAGAGTTGTACATATGTTTCACAGTACAGGATCTGT...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTAGCTTTTTCTGTCCATaGAACTCAAGAGCGCCTCCT +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASFFCP*NSRAPP
Trigger: AGGAGGCGCTCTTGAGTTGCATGGACAGAAAAAGCT...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGGTGCAGGAAGTGTTTaGTTCCCAATTTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAGAGSV*FPIWSS
Trigger: CGATGACCAAATTGGGAAGCAAACACTTCCTGCACC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTTGTCTAAATCCAAGGTaGAGGAAGTGTTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPCLNPR*RKCLLP
Trigger: GGGAAGCAAACACTTCCTGCACCTTGGATTTAGACA...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCACCTGGAACTCTTCTaGCTGGTACATGGAGTAATC +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLHLELF*LVHGVI
Trigger: GATTACTCCATGTACCAGGCAGAAGAGTTCCAGGTG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGATCTCCTCCCCGATGTaGAGGTACATTGGTTTCCCT +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQISSPM*RYIGFP
Trigger: AGGGAAACCAATGTACCTGCACATCGGGGAGGAGAT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGAGTGGTCAAAAGTGTTaGGTTCCTCCGGCCCATCTT +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQSGQKC*VPPAHL
Trigger: AAGATGGGCCGGAGGAACGCAACACTTTTGACCACT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGATCATCTTGCACATCTTaGTGTCACGGTCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERSSCTS*CHGPRG
Trigger: TCCCCTCGGACCGTGACAGCAAGATGTGCAAGATGA...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATAGGTGGACACAGCATTaGAGTCTTGCCTGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHRWTQH*SLAWAW
Trigger: CCAAGCCCAGGCAAGACTGCAATGCTGTGTCCACCT...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACCGGTAGTTGGAATGTaGTCGGTTGTTATAGAATTT +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGPVVGM*SVVIEF
Trigger: AAATTCTATAACAACCGAGCACATTCCAACTACCGG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTCCGGTAGTTGGAATGTaGTCGGTTGTTATAGAATTT +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGPVVGM*SVVIEF
Trigger: AAATTCTATAACAACCGAGCACATTCCAACTACCGG...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CCCAAGAGGCTGCAGGAAAGTGAATGTTTCCAGCATTGGCCAGCACCGCCCCAGTTGAATGTACATCTGTaGATAGCACCCACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: PKRLQESECFQHWPAPPQLNVHL*IAPTAN
Trigger: ATTTGCAGTGGGTGCTATGCACAGATGTACATTCAA...CTGGGGCGGTGCTGGCCAATGCTGGAAACATTCACTTTCCTGCAGCCTCTTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGATTGAATGTACATCTGTaGATAGCACCCACTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGLNVHL*IAPTAN
Trigger: ATTTGCAGTGGGTGCTATGCACAGATGTACATTCAA...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAAGTAGTAGTGGCTCCTaGCAGGGTAGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKSSSGS*QGSSAP
Trigger: TGGAGCAGAGCTACCCTGGCAGGAGCCACTACTACT...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp CACTTCAATGTAAGCGAAGTCGTTCCAGAGGTGGAAGAAGTGCTGCTTGGAACTAGTAGTAGTGGCTCCTaGCAGGGTAGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: HFNVSEVVPEVEEVLLGTSSSGS*QGSSAP
Trigger: TGGAGCAGAGCTACCCTGGCAGGAGCCACTACTACT...AGTTCCAAGCAGCACTTCTTCCACCTCTGGAACGACTTCGCTTACATTGAAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGCAGTCACTGACGCCTaGGTTCTTTGGAATCAGAGC +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERAVTDA*VLWNQS
Trigger: GCTCTGATTCCAAAGAACGCAGGCGTCAGTGACTGC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCAGAGGTGGAAGAAGTaGTGCTTGGAACTCTCCATC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIQRWKK*CLELSI
Trigger: GATGGAGAGTTCCAAGCAGCACTTCTTCCACCTCTG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATCTTGAGACCCCTGTCTaGCCCAAGCTTTTCCAGCAC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHLETPV*PKLFQH
Trigger: GTGCTGGAAAAGCTTGGGGCAGACAGGGGTCTCAAG...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGTCCAAGTCCAAACCTaGCACTCAAAGTCTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEVQVQT*HSKSPE
Trigger: TTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGAC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGATTCTCCACCTGGCATTaGAGTGCACATGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERFSTWH*SAHGPD
Trigger: GTCAGGTCCATGTGCACTGCAATGCCAGGTGGAGAA...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGACTCTGGTGCCTCGTaGAAGATTATAAACCACAGA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQDSGAS*KIINHR
Trigger: TCTGTGGTTTATAATCTTGCACGAGGCACCAGAGTC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCCTCTGAGATGTGGATaGAATAGACCGTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIPLRCG*NRPWQK
Trigger: CTTCTGCCACGGTCTATTCCATCCACATCTCAGAGG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATTCTGCCATGCCACCTaGGTGAAGGGTCTTGTTCAG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGFCHAT*VKGLVQ
Trigger: CTGAACAAGACCCTTCACCCAGGTGGCATGGCAGAA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAGCCCTCCAGACTACCTCCTAGCTGGGTCAGGGCTCCTGCCAAAGTGGATCTTGTTCACTCTCTTTCTTaGATCTATAGGTGTCAAACC +
Preference number: 4 (lower is better)
Translates to: QPSRLPPSWVRAPAKVDLVHSLS*IYRCQT
Trigger: GGTTTGACACCTATAGATCCAAGAAAGAGAGTGAAC...AAGATCCACTTTGGCAGGAGCCCTGACCCAGCTAGGAGGTAGTCTGGAGGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCACGGAGGGGCCCGTTaGTACGTGGTGAAAAATAAA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIHGGAR*YVVKNK
Trigger: TTTATTTTTCACCACGTACCAACGGGCCCCTCCGTG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGAACATTGATGCAGTCTaGGTGCCGGACCAGCCAGTT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWNIDAV*VPDQPV
Trigger: AACTGGCTGGTCCGGCACCCAGACTGCATCAATGTT...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGAACATCCGAGAGGATaGAGAATGTGGTGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHEHPRG*RMWCLA
Trigger: CGCGAGGCACCACATTCTCCATCCTCTCGGATGTTC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAAGTCGTTCCAGAGGTaGAAGAAGTGCTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLKSFQR*KKCCLE
Trigger: TTCCAAGCAGCACTTCTTCCACCTCTGGAACGACTT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGTTGAAAAGCTGCCATaGTATGCCTTGCAGAATGGA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQVEKLP*YALQNG
Trigger: TCCATTCTGCAAGGCATACCATGGCAGCTTTTCAAC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp TCCCACCTGGGGAATGGACTCTTGGACCGAGTCTCATGGGTGCAGTTGGGTGGACAACTTGGAAGATTTTaGCTTTGTGATCCTCAGTGT +
Preference number: 4 (lower is better)
Translates to: SHLGNGLLDRVSWVQLGGQLGRF*LCDPQC
Trigger: ACACTGAGGATCACAAAGCCAAAATCTTCCAAGTTG...TCCACCCAACTGCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCAGGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGGCTCCTGCCAAAGTaGATCTTTGCTGTCAGCACA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGLLPK*IFAVST
Trigger: TGTGCTGACAGCAAAGATCCACTTTGGCAGGAGCCC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGCCTCCCCTCTGAAATaGCACTGGCCTCCATTTTAC +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERASPLK*HWPPFY
Trigger: GTAAAATGGAGGCCAGTGCCATTTCAGAGGGGAGGC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGTTCTTTCCCATCTTaGGGGCTCACTTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGSFPS*GLTFPI
Trigger: GATGGGGAAAGTGAGCCCCCAAGATGGGAAAGAACC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCAAGATCAGCCAAATTaGCTCACCAGAAACATGGCG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLQDQPN*LTRNMA
Trigger: CGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGGACCCAGGGAGACTCTaGTGCCTCGTGCAAGATTAT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWDPGRL*CLVQDY
Trigger: ATAATCTTGCACGAGGCACCAGAGTCTCCCTGGGTC...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAATGGGGAATGGACTCTTaGACCGAGTCTCATGGGTGC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKWGMDS*TESHGC
Trigger: GCACCCATGAGACTCGGTCCAAGAGTCCATTCCCCA...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACAGCTTGCCTCCCTCTaGGATGTGGATGGAATAGAC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKQLASL*DVDGID
Trigger: GTCTATTCCATCCACATCTCAGAGGGAGGCAAGCTG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAGCCATGCCACCTGGGTaGAGGGTCTTGTTCAGAAAT +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKAMPPG*RVLFRN
Trigger: ATTTCTGAACAAGACCCTTCACCCAGGTGGCATGGC...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGATTGGGGTCGATGACATaGACAATAACTCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERLGSMT*TITPRW
Trigger: CCACCGTGGAGTTATTGTTCATGTCATCGACCCCAA...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAATGGATGACTGTGCCTaGTTTGGGGTCGATGACATG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERMDDCA*FGVDDM
Trigger: CATGTCATCGACCCCAAATCAGGCACAGTCATCCAT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGAGCCTCGATGTCCATaGTATTCAATATGGTCTTCC +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLEPRCP*YSIWSS
Trigger: GGAAGACCATATTGAATATCATGGACATCGAGGCTC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTAGCTTTCCAGAGGTCTaGAATTTTCTCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASFPEV*NFLPTF
Trigger: AAAGGTGGGGAGAAAATTTCAGACCTCTGGAAAGCT...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGCATATTTTTCCTGGGTaGGCTTTCCAGAGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLHIFPG*AFQRSE
Trigger: TTCAGACCTCTGGAAAGCTCACCCAGGAAAAATATG...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGTAGGAGTCCTCTGTaGTCATCTTGCACATCTTGC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGRSPL*SSCTSC
Trigger: GCAAGATGTGCAAGATGATCACAGAGGACTCCTACC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTCCCGTTGGTACGTGGTaGAAAATAAACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPPVGTW*KINQNP
Trigger: TGGATTTTGGTTTATTTTTCACCACGTACCAACGGG...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCCATCCCCCACTGGTCTGCTGCCAAGAGTCACCGTCATAGTCTACCACGAGGTGGGCCATCATATAACTaGATTCCTCTAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: AIPHWSAAKSHRHSLPRGGPSYN*IPLIGK
Trigger: TTTTCCAATTAGAGGAATTCAGTTATATGATGGCCC...ACCTCGTGGTAGACTATGACGGTGACTCTTGGCAGCAGACCAGTGGGGGATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GGGACAGTCAGCCTTAGAGTCAAAATGCCTAGAAAGGTGTCTTACATTAATTGGAATGGGTGCTCCTGGTaGGCGCCCCCTCCAGGTAAA +
Preference number: 4 (lower is better)
Translates to: GTVSLRVKMPRKVSYINWNGCSW*APPPGK
Trigger: TTTACCTGGAGGGGGCGCTCACCAGGAGCACCCATT...CCAATTAATGTAAGACACCTTTCTAGGCATTTTGACTCTAAGGCTGACTGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTTCAGCAGGCGATTGTaGACATCCGAGAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHFSRRL*TSERME
Trigger: CTCCATCCTCTCGGATGTTCACAATCGCCTGCTGAA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGACGTATCTTCCCTTTaGTGCCATAAGCACTATGGA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSADVSSL*CHKHYG
Trigger: TCCATAGTGCTTATGGCATCAAAGGGAAGATACGTC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGCCGGAAGCTGCCTTTaGAGCCAACGAATGCCATTT +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHAGSCL*SQRMPF
Trigger: AAATGGCATTCGTTGGCTTCAAAGGCAGCTTCCGGC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGGAGGGCTGAATCCCTaGGCCATTCCAGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNGGLNP*AIPEAA
Trigger: GGCAGCCTCTGGAATGGCTCAGGGATTCAGCCCTCC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGCTCAGTTCCCTGGATaGAGAGCAAATGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHAQFPG*RANEAL
Trigger: TAGGGCCTCATTTGCTCTTCATCCAGGGAACTGAGC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACAGGCAGGCCCTCTTTaGAGGAAAGAGTTTGTGGTT +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGQAGPL*RKEFVV
Trigger: AACCACAAACTCTTTCCTTCAAAGAGGGCCTGCCTG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAAAGAAGTCCTTCCTGTaGCTCTGGCCTTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERKKSFL*LWPLKQ
Trigger: CTGCTTCAAAGGCCAGAGTCACAGGAAGGACTTCTT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTTGGACAAGAAGGACATaGGGTCATTTTAACTCTCCT +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPWTRRT*GHFNSP
Trigger: AGGAGAGTTAAAATGACCTCATGTCCTTCTTGTCCA...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGAAGTGGTTCACAGTGTaGGACCCTTGCATTAGAAGA +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLKWFTV*DPCIRR
Trigger: TCTTCTAATGCAAGGGTCTCACACTGTGAACCACTT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CTTCCCATCCACTTCAATGTAAGCGAAGTCGTTCCAGAGGTGGAAGAAGTGCTGGGTCCTTTGTTTTCCTaGGTCCTCGTCCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: LPIHFNVSEVVPEVEEVLGPLFS*VLVPVV
Trigger: TACTACTGGGACGAGGACTCAGGAAAACAAAGGACC...CAGCACTTCTTCCACCTCTGGAACGACTTCGCTTACATTGAAGTGGATGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000495041.1
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAAAAATAGCCTCCTTCTaGCATGCCACCTGGGTGAAG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERKIASF*HATWVK
Trigger: CTTCACCCAGGTGGCATGGCAGAAGGAGGCTATTTT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAACCTTCATCATTCACTaGAACAGAAAGGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSETFIIH*NRKDPA
Trigger: GGCAGGATCCTTTCTGTTGCAGTGAATGATGAAGGT...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAATCATCTTGCACATCTTaGTGTCACGGTCCGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKSSCTS*CHGPRG
Trigger: TCCCCTCGGACCGTGACAGCAAGATGTGCAAGATGA...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACGTCCTCAAAGGCAATaGCGGTCACGTTGTTATGGG +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKRPQRQ*RSRCYG
Trigger: CCCATAACAACGTGACCGGCATTGCCTTTGAGGACG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTCCACTTTGTCCATCTaGAAGGTCCTCACGAAGACG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWSTLSI*KVLTKT
Trigger: CGTCTTCGTGAGGACCTTGCAGATGGACAAAGTGGA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTTGCCATGGTATGCCTTaGAGAATGGAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVICHGMP*RMEFLK
Trigger: CTTCAGGAACTCCATTCTGCAAGGCATACCATGGCA...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGAKVDL*CQHNPG
Trigger: ACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGGCCAAAGTGGATCTTTaGTGTCAGCACAACCCAGGT +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWAKVDL*CQHNPG
Trigger: ACCTGGGTTGTGCTGACAGCAAAGATCCACTTTGGC...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTTCTCCACCTGGCATTaGAGTGCACATGGACCTGAC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHFSTWH*SAHGPD
Trigger: GTCAGGTCCATGTGCACTGCAATGCCAGGTGGAGAA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCCAGGGAGACTCTGGTaGCTCGTGCAAGATTATAAA +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQPGRLW*LVQDYK
Trigger: TTTATAATCTTGCACGAGGCACCAGAGTCTCCCTGG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp TTTCCAGCTCTGAAATCCCAGGCCGAGGGAGTACGAGCACATCTAGGGTCTCCTGTGCTACCAAGAAAATaGCTAGATATTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: FPALKSQAEGVRAHLGSPVLPRK*LDIGSW
Trigger: CCAAGAGCCAATATCTAGGCATTTTCTTGGTAGCAC...AGGAGACCCTAGATGTGCTCGTACTCCCTCGGCCTGGGATTTCAGAGCTGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCATTAACTACATGGCTGTTCTTAGACTTATTGGAAAGGCCAAGGGGACAAGATGTTGAGCCACTTTCCTaGAGCCAAGTGGGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: ALTTWLFLDLLERPRGQDVEPLS*SQVGAC
Trigger: GCAGGCGCCCACTTGGCTGCAGGAAAGTGGCTCAAC...ATCTTGTCCCCTTGGCCTTTCCAATAAGTCTAAGAACAGCCATGTAGTTAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACTGCAACTCAGGGCTCTaGTCAGGGCACCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNCNSGL*SGHPAA
Trigger: GGCTGCTGGGTGCCCTGACCAGAGCCCTGAGTTGCA...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTACCGCGTTCAAATACTaGACCAGACGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVITAFKY*TRRSLS
Trigger: AGAGAGTGAACGTCTGGTCCAGTATTTGAACGCGGT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTAGAGCAAACTTGATGTaGCCCCCAAAGGTATCGAAG +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIRANLM*PPKVSK
Trigger: CTTCGATACCTTTGGGGGCCACATCAAGTTTGCTCT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACCTGATGTATGTGGGTaGGTCATAACCTCCCCTTTC +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERPDVCG*VITSPF
Trigger: GAAAGGGGAGGTTATGACCCACCCACATACATCAGG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCGGAAAGTGCAGTTTTaGATGTTGATGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIRKVQF*MLMGPS
Trigger: TGATGGCCCCATCAACATCCAAAACTGCACTTTCCG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAACCAAAGAGCTTCTTaGGCATCGGCACGTCTACGA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGNQRAS*ASARLR
Trigger: TCGTAGACGTGCCGATGCCCAAGAAGCTCTTTGGTT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTTCTTCACCACAGGGATaGGCACAACTTGGAAGATTT +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSASSPQG*AQLGRF
Trigger: AAATCTTCCAAGTTGTGCCCATCCCTGTGGTGAAGA...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACCTCCCTTAGCTGTGTaGTTCTTTCCCATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKPPLAV*FFPILG
Trigger: CCCCAAGATGGGAAAGAACCACACAGCTAAGGGAGG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACTTACAGGAGCTCTTTaGGCTCTCTATAAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGLTGAL*ALYKVG
Trigger: GCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAG...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTGAAAGAGTTTGTGGTTaGGGCAGGAAAGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSAERVCG*GRKGDK
Trigger: TTTATCCCCTTTCCTGCCCCAACCACAAACTCTTTC...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGAAAGAGTTTGTGGTTaGGGCAGGAAAGGGGATAAA +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEERVCG*GRKGDK
Trigger: TTTATCCCCTTTCCTGCCCCAACCACAAACTCTTTC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGACATTCAACATTCCTaGCCACCTGAAAGTGATCAC +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLDIQHS*PPESDH
Trigger: GTGATCACTTTCAGGTGGCCAGGAATGTTGAATGTC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATTTGGGGTCGATGACATaGACAATAACTCCACGGTGG +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHLGSMT*TITPRW
Trigger: CCACCGTGGAGTTATTGTTCATGTCATCGACCCCAA...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGAGCTTTCCAGAGGTCTaGAATTTTCTCCCCACCTTT +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQSFPEV*NFLPTF
Trigger: AAAGGTGGGGAGAAAATTTCAGACCTCTGGAAAGCT...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp TCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGACATCTCCAATCATGGTAGGAGTCCTCTGTaGTCATCTTGCACATCTTGC +
Preference number: 4 (lower is better)
Translates to: SLALGTPLPSNAKDISNHGRSPL*SSCTSC
Trigger: GCAAGATGTGCAAGATGATCACAGAGGACTCCTACC...ATGATTGGAGATGTCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTTCTCTCTCTCGTTCTaGGCTTTCAGCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWFSLSF*AFSFRN
Trigger: GTTCCTGAAGCTGAAAGCTCAGAACGAGAGAGAGAA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATTCTCTCTCTCGTTCTaGGCTTTCAGCTTCAGGAAC +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGFSLSF*AFSFRN
Trigger: GTTCCTGAAGCTGAAAGCTCAGAACGAGAGAGAGAA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCGACAGCCCTCTCGGTaGACTTGGGGTAAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNRQPSR*TWGKLW
Trigger: CCACAGCTTACCCCAAGTTCACCGAGAGGGCTGTCG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCTCCAGGTAGACACTTaGGTAGGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNLQVDT*VGAGGS
Trigger: GCTGCCACCTGCCCCTACTCAAGTGTCTACCTGGAG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAGTTCCAGGTACCATGTaGAATGCAGCAGATTTCTGG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERVPGTM*NAADFW
Trigger: CCAGAAATCTGCTGCATTTCACATGGTACCTGGAAC...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTATCAGTGGATATCCATaGACTGTTGGGTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIISGYP*TVGFQV
Trigger: TACCTGGAACCCAACAGTTCATGGATATCCACTGAT...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAACAGATCCTGTACTGTaGAACATATGTACAACTCTG +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQTDPVL*NICTTL
Trigger: CAGAGTTGTACATATGTTTCACAGTACAGGATCTGT...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCTTTAAAAATGTCGTTAATGTATGGGACAGTCAGCCTTAGAGTCAAAATGCCTGGCGCCTGCTCACCCTaGGTCCTCGTCCCAGTAGTA +
Preference number: 4 (lower is better)
Translates to: ALKMSLMYGTVSLRVKMPGACSP*VLVPVV
Trigger: TACTACTGGGACGAGGACTCAGGGTGAGCAGGCGCC...AGGCATTTTGACTCTAAGGCTGACTGTCCCATACATTAACGACATTTTTAAAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR GCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAGGTGCAGGAAGTGTTTaGTTCCCAATTTGGTCATCG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGGAGSV*FPIWSS
Trigger: CGATGACCAAATTGGGAAGCAAACACTTCCTGCACC...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTTGTCTAAATCCAAGGTaGAGGAAGTGTTTGCTTCCC +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVICLNPR*RKCLLP
Trigger: GGGAAGCAAACACTTCCTGCACCTTGGATTTAGACA...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACTGGGGGCGCAGGATCTaGAGGGAAGCACCTGGAACT +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNWGRRI*REAPGT
Trigger: AGTTCCAGGTGCTTCCCTGCAGATCCTGCGCCCCCA...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GATAGAGTTCTCCCTCTTACAGGAGCTCTTTGGGCTCTCTATAAGGTGGGCCAGCTGTTCTTTATCTCTTaGTTGGAGCCGTCGTCATAC +
Preference number: 4 (lower is better)
Translates to: DRVLPLTGALWALYKVGQLFFIS*LEPSSY
Trigger: GTATGACGACGGCTCCAAGCAAGAGATAAAGAACAG...CTGGCCCACCTTATAGAGAGCCCAAAGAGCTCCTGTAAGAGGGAGAACTCTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAACAGAGGTGGAAGAAGTaGTGCTTGGAACTCTCCATC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKQRWKK*CLELSI
Trigger: GATGGAGAGTTCCAAGCAGCACTTCTTCCACCTCTG...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGATGCCATGGTATGCCTTaGAGAATGGAGTTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERCHGMP*RMEFLK
Trigger: CTTCAGGAACTCCATTCTGCAAGGCATACCATGGCA...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCCTGGAGGCCCCCTGTaGTCAGTTCCCTGGATGAAG +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNPGGPL*SVPWMK
Trigger: CTTCATCCAGGGAACTGAGCACAGGGGGCCTCCAGG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGAGCCCTACTCCCTCTaGTGGGCCTCACCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNEPYSL*WASPVE
Trigger: CTCTACAGGTGAGGCCCAGCAGAGGGAGTAGGGCTC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGGTGCTACCAAGAAAATaGCTAGATATTGGCTCTTGG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLVLPRK*LDIGSW
Trigger: CCAAGAGCCAATATCTAGGCATTTTCTTGGTAGCAC...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACCAGCCACTGTGGATGTaGCCCCAGGGAAGCAGGTCA +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNQPLWM*PQGSRS
Trigger: TGACCTGCTTCCCTGGGGCCACATCCACAGTGGCTG...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAACAATCGGCTCGTCGTaGTCTTTAATGACCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERTIGSS*SLMTSL
Trigger: CAAGCTGGTCATTAAAGACCACGACGAGCCGATTGT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGAACCGCGTTCAAATACTaGACCAGACGTTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERTAFKY*TRRSLS
Trigger: AGAGAGTGAACGTCTGGTCCAGTATTTGAACGCGGT...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATCGCCATGCTCTGTCTaGAACAATTTGAATACCCGG +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSPCSV*NNLNTR
Trigger: CCGGGTATTCAAATTGTTCCAGACAGAGCATGGCGA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCTTCTGCCTGGTACATaGAGTAATCAGTACTGGCAA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVILLPGT*SNQYWQ
Trigger: TTGCCAGTACTGATTACTCCATGTACCAGGCAGAAG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAATGGCCATCCAGAAGGTaGACACAGCATTGCAGTCTT +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKWPSRR*TQHCSL
Trigger: AAGACTGCAATGCTGTGTCCACCTTCTGGATGGCCA...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACACGGCCGCTTGTCCTTaGCAGAGGCCTCGGTGGTTT +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNTAACP*QRPRWF
Trigger: AAACCACCGAGGCCTCTGCCAAGGACAAGCGGCCGT...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGATCTTTATCTCTTGCTTaGAGCCGTCGTCATACGGGA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGSLSLA*SRRHTG
Trigger: TCCCGTATGACGACGGCTCCAAGCAAGAGATAAAGA...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACGGAAAGTGCAGTTTTaGATGTTGATGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERRKVQF*MLMGPS
Trigger: TGATGGCCCCATCAACATCCAAAACTGCACTTTCCG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ATTGGCATTAACTACATGGCTGTTCTTAGACTTATTGGAAAGGCCAAGGGGACATCTGGTCCCAGTGGATaGTGTAGCCCTTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: IGINYMAVLRLIGKAKGTSGPSG*CSPSAG
Trigger: CCCTGCAGAAGGGCTACACCATCCACTGGGACCAGA...TGTCCCCTTGGCCTTTCCAATAAGTCTAAGAACAGCCATGTAGTTAATGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAAACCAAAGAGCTTCTTaGGCATCGGCACGTCTACGA +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKNQRAS*ASARLR
Trigger: TCGTAGACGTGCCGATGCCCAAGAAGCTCTTTGGTT...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAAGTCGTTCCAGAGGTaGAAGAAGTGCTGCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGKSFQR*KKCCLE
Trigger: TTCCAAGCAGCACTTCTTCCACCTCTGGAACGACTT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGACTGCCTGCCCTACTaGACTGCAGACCCCTCAAGC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNDCLPY*TADPSS
Trigger: GCTTGAGGGGTCTGCAGTCCAGTAGGGCAGGCAGTC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACCTCTGAAATGGCACTaGCCTCCATTTTACCTCTCT +
Preference number: 4 (lower is better)
Translates to: AAISLKAEPYGHLPAAERPLKWH*PPFYLS
Trigger: AGAGAGGTAAAATGGAGGCCAGTGCCATTTCAGAGG...TCTTTCAGCTGCTGGGAGGTGACCATAGGGCTCTGCTTTTAAAGATATGGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAAGGAGCTCACTTCTGTaGACTTCACCCTCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKRSSLL*TSPSWS
Trigger: ACTCCAAGAGGGTGAAGTCCACAGAAGTGAGCTCCT...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAAGACCGAGTGATGGGTaGAATTTCATCCTTGGCACT +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGRPSDG*NFILGT
Trigger: AGTGCCAAGGATGAAATTCCACCCATCACTCGGTCT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACTGGTCAGCATGGCCTTaGAGAGGAAGTCCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNWSAWP*RGSPAS
Trigger: GGAGGCAGGACTTCCTCTTCAAGGCCATGCTGACCA...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTCCCGTTGGTACGTGGTaGAAAATAAACCAAAATCCA +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVIPVGTW*KINQNP
Trigger: TGGATTTTGGTTTATTTTTCACCACGTACCAACGGG...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAGGGCCATCATATAACTaGATTCCTCTAATTGGAAAA +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQGPSYN*IPLIGK
Trigger: TTTTCCAATTAGAGGAATTCAGTTATATGATGGCCC...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCGCTGGGAGCAGGAGGGAAGAGATCTGCTAGCTGTCATTCTACTCTAGTCATTTGCAGTTTTGGATGTTaGTGGGGCCATCATATAACT +
Preference number: 4 (lower is better)
Translates to: ALGAGGKRSASCHSTLVICSFGC*WGHHIT
Trigger: AGTTATATGATGGCCCCATCAACATCCAAAACTGCA...AATGACTAGAGTAGAATGACAGCTAGCAGATCTCTTCCCTCCTGCTCCCAGCGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp GCATTAACTACATGGCTGTTCTTAGACTTATTGGAAAGGCCAAGGGGACAAGATAGCCCTTCTGCAGGGTaGCAACCGGTTGGTATTGCT +
Preference number: 4 (lower is better)
Translates to: ALTTWLFLDLLERPRGQDSPSAG*QPVGIA
Trigger: AGCAATACCAACCGGTTGTCACCCTGCAGAAGGGCT...ATCTTGTCCCCTTGGCCTTTCCAATAAGTCTAAGAACAGCCATGTAGTTAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR TCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGACCATGGGGATCTGTaGATGACCAGCCCTCCAGAC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNDHGDL*MTSPPD
Trigger: GTCTGGAGGGCTGGTCATTCACAGATCCCCATGGTC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp ACCAGAGCCAATTTCCTTGGCTCTAGGTACACCCCTTCCAAGCAATGCAAAGGAATCAGTGGATATCCATaGACTGTTGGGTTCCAGGTA +
Preference number: 4 (lower is better)
Translates to: TRANFLGSRYTPSKQCKGISGYP*TVGFQV
Trigger: TACCTGGAACCCAACAGTTCATGGATATCCACTGAT...TCCTTTGCATTGCTTGGAAGGGGTGTACCTAGAGCCAAGGAAATTGGCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp CAAGATCAGCCAAATTGGCTCACCAGAAACATGGCGAGCCCTACTCCCTCTGCTCTTGCATTAGAAGAGTaGAAACTCAACAAAACCGTG +
Preference number: 4 (lower is better)
Translates to: QDQPNWLTRNMASPTPSALALEE*KLNKTV
Trigger: CACGGTTTTGTTGAGTTTTCACTCTTCTAATGCAAG...AGCAGAGGGAGTAGGGCTCGCCATGTTTCTGGTGAGCCAATTTGGCTGATCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR TCA 90 bp AGAGCAAATGAGGCCCTAAGGCAGGAGCTCACTTCTGTGGACTTCACCCTCTTGACAGATCCTGTACTGTaGAACATATGTACAACTCTG +
Preference number: 4 (lower is better)
Translates to: RANEALRQELTSVDFTLLTDPVL*NICTTL
Trigger: CAGAGTTGTACATATGTTTCACAGTACAGGATCTGT...CAAGAGGGTGAAGTCCACAGAAGTGAGCTCCTGCCTTAGGGCCTCATTTGCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGACCTTCATCATTCACTaGAACAGAAAGGATCCTGCC +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWTFIIH*NRKDPA
Trigger: GGCAGGATCCTTTCTGTTGCAGTGAATGATGAAGGT...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp GGGACAGTCAGCCTTAGAGTCAAAATGCCTAGAAAGGTGTCTTACATTAATTGGAGTAGTAGTGGCTCCTaGCAGGGTAGCTCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: GTVSLRVKMPRKVSYINWSSSGS*QGSSAP
Trigger: TGGAGCAGAGCTACCCTGGCAGGAGCCACTACTACT...CCAATTAATGTAAGACACCTTTCTAGGCATTTTGACTCTAAGGCTGACTGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000560027.1
CDS-3UTR GCA 90 bp AATGGGGAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAATTTGAAGCCAACGAATaGCATTTGCTCTTTCAACTT +
Preference number: 4 (lower is better)
Translates to: NGELQLLCTQAGLTGSEQFEANE*HLLFQL
Trigger: AAGTTGAAAGAGCAAATGGCATTCGTTGGCTTCAAA...TTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTCCCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp AGTTCTACCCCAGCTCCTAATCCTGTGAGGTTGGCTCTTGCTTACAGGAGTAAAAAGCACCCAAGAGGCTaGAGGAAAGTGAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: SSTPAPNPVRLALAYRSKKHPRG*RKVNVS
Trigger: GGAAACATTCACTTTCCTGCAGCCTCTTGGGTGCTT...TTTACTCCTGTAAGCAAGAGCCAACCTCACAGGATTAGGAGCTGGGGTAGAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACAGTCAGAGGCAGGGCTaGCTGGGGACTGAATTCCTC +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNSQRQG*LGTEFL
Trigger: GAGGAATTCAGTCCCCAGGCAGCCCTGCCTCTGACT...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR GCA 90 bp ATACAAACACTCTATACATCTAACTCCCGAAAAAGGACCAGCTATTTCGGCAACGCACCAATGGGGAGTTaGAGCTACTGTGCACCCAGG +
Preference number: 4 (lower is better)
Translates to: IQTLYTSNSRKRTSYFGNAPMGS*SYCAPR
Trigger: CCTGGGTGCACAGTAGCTGCAACTCCCCATTGGTGC...GTTGCCGAAATAGCTGGTCCTTTTTCGGGAGTTAGATGTATAGAGTGTTTGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGAGTCATCTAGTCCAAGTCCAAACCTGCCACTCAAAGTCTCCTGAAAGGTGGTCAAACCGGTCAGAATaGATGACTGTGCCTGATTTG +
Preference number: 4 (lower is better)
Translates to: ESHLVQVQTCHSKSPERWSNRSE*MTVPDL
Trigger: CAAATCAGGCACAGTCATCCATTCTGACCGGTTTGA...CCACCTTTCAGGAGACTTTGAGTGGCAGGTTTGGACTTGGACTAGATGACTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GAGTTGCAGCTACTGTGCACCCAGGCTGGGCTGACAGGTAGTGAACAAAGTGAAGTTCACTCTCTTTCTTaGATCTATAGGTGTCAAACC +
Preference number: 4 (lower is better)
Translates to: ELQLLCTQAGLTGSEQSEVHSLS*IYRCQT
Trigger: GGTTTGACACCTATAGATCCAAGAAAGAGAGTGAAC...TTCACTTTGTTCACTACCTGTCAGCCCAGCCTGGGTGCACAGTAGCTGCAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000220244.7
ENST00000356249.9
ENST00000394685.8
CDS-3UTR CCA 90 bp GCAGCCATATCTTTAAAAGCAGAGCCCTATGGTCACCTCCCAGCAGCTGAAAGACCTCCAAGTTCAGAATaGTGCTGTTCACATTGGTGT +
Preferenc