RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CELF6 (Homo sapiens)

Ensembl gene IDs: ENSG00000140488

Ensembl transcript IDs: ENST00000287202.10, ENST00000395258.7, ENST00000437872.7, ENST00000543764.6, ENST00000567083.2

Found 467 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCGGCAGTGGCGCGGGGTGGAAGGCGCCCAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCGCGCTCCCGGTCGGTGTCCGCCAGC +
Preference number: 1 (lower is better)
Translates to: SGSGAGWKAPRWPAI*CIRRSARSRSVSAS
Trigger: GCTGGCGGACACCGACCGGGAGCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGCT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR GCA 90 bp GGCAGTGGCGCGGGGTGGAAGGCGCCCAGGTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGCTCCCGGTCGGTGTCCGCCAGCTTG +
Preference number: 1 (lower is better)
Translates to: GSGAGWKAPRWPAIC*IRRSARSRSVSASL
Trigger: CAAGCTGGCGGACACCGACCGGGAGCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR TCA 90 bp TGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGCCAACCTaGGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTTGGG +
Preference number: 1 (lower is better)
Translates to: CWLGGLPGWQRPGPT*ALPGASSGMHSEFG
Trigger: CCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 90 bp CCGCCTGGGGAAGCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTaGTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGCCAACC +
Preference number: 1 (lower is better)
Translates to: PPGEAVVPQERQSHS*WLGGLPGWQRPGPT
Trigger: GGTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGCTTCCCCAGGCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTC +
Preference number: 1 (lower is better)
Translates to: SPRHQPWVRSTSVRS*SFGKGCSSVSVLFL
Trigger: GAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 90 bp CTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCTaGTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTC +
Preference number: 1 (lower is better)
Translates to: LGFPCGEALGTPNAL*WFPWTVTPHQPYLL
Trigger: GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR CCA 90 bp GGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGC +
Preference number: 1 (lower is better)
Translates to: GFPCGEALGTPNALC*FPWTVTPHQPYLLC
Trigger: GCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 90 bp AAAGGCCAGGGCCAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATaGACTCTGAGTTTGGGGATTGTGGATTGTGGGTTCACTGCTTCC +
Preference number: 1 (lower is better)
Translates to: KGQGQPELCLGPLLG*TLSLGIVDCGFTAS
Trigger: GGAAGCAGTGAACCCACAATCCACAATCCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCCCTGGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 90 bp CCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTaGGCTCTATGCTGCAGGCACAGAACAACCCACTTGATAAAAACA +
Preference number: 1 (lower is better)
Translates to: PLDSHSSPALFALPA*ALCCRHRTTHLIKT
Trigger: TGTTTTTATCAAGTGGGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 90 bp TTAAGAGGGAATGAGACACAGAACAATCTTTCCACAGCCCCCATCTaGCTAGGCTGGGGCTGTCAAGGGTCTCCTTCACCCTGTCTCCTA +
Preference number: 1 (lower is better)
Translates to: LRGNETQNNLSTAPI*LGWGCQGSPSPCLL
Trigger: TAGGAGACAGGGTGAAGGAGACCCTTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATTCCCTCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR CCA 90 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTaGGGCTGTCAAGGGTCTCCTTCACCCTGTCTCCTAGGGATATTT +
Preference number: 1 (lower is better)
Translates to: NETQNNLSTAPICLG*GCQGSPSPCLLGIF
Trigger: AAATATCCCTAGGAGACAGGGTGAAGGAGACCCTTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 90 bp CACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCGCTCTATGCTaGAGGCACAGAACAACCCACTTGATAAAAACAATCCTTAGAGTG +
Preference number: 1 (lower is better)
Translates to: HSSPALFALPACALC*RHRTTHLIKTILRV
Trigger: CACTCTAAGGATTGTTTTTATCAAGTGGGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR TCA 90 bp CTCCTGGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGAAAGGCTaGCCAAGGCAAGGTGAGTCATGGTGTTCTAAGCTGAATCTTTTG +
Preference number: 1 (lower is better)
Translates to: LLGKICARPYRPRKG*PRQGESWCSKLNLL
Trigger: CAAAAGATTCAGCTTAGAACACCATGACTCACCTTGCCTTGGTCAGCCTTTCCTGGGCCTGTAGGGCCTTGCACATATTTTTCCCAGGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR GCA 90 bp AGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACCCACTTGATAAAAACAATCCTTAGA +
Preference number: 1 (lower is better)
Translates to: SHSSPALFALPACAL*CRHRTTHLIKTILR
Trigger: TCTAAGGATTGTTTTTATCAAGTGGGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR CCA 90 bp TCTCACAGAAGCAGGCAGGAAGCACCACCATTGATCAGCTTTATATaGCACCCACTGTATACAACAGACAGACAAAGACAGACAGACAGA +
Preference number: 1 (lower is better)
Translates to: SHRSRQEAPPLISFI*HPLYTTDRQRQTDR
Trigger: TCTGTCTGTCTGTCTTTGTCTGTCTGTTGTATACAGTGGGTGCCATATAAAGCTGATCAATGGTGGTGCTTCCTGCCTGCTTCTGTGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR TCA 90 bp GAATCTTTTGCCCATCTCACAGAAGCAGGCAGGAAGCACCACCATTaGTCAGCTTTATATGGCACCCACTGTATACAACAGACAGACAAA +
Preference number: 1 (lower is better)
Translates to: ESFAHLTEAGRKHHH*SALYGTHCIQQTDK
Trigger: TTTGTCTGTCTGTTGTATACAGTGGGTGCCATATAAAGCTGATCAATGGTGGTGCTTCCTGCCTGCTTCTGTGAGATGGGCAAAAGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR-3UTR GCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTATGGTCCGGCTGCCGTaGAGACCCCGGATGGCCGCC +
Preference number: 2 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIMVRLP*RPRMAA
Trigger: GGCGGCCATCCGGGGTCTGCACGGCAGCCGGACCAT...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCGGGTGCCAGGGCCGCTaGCAGGCGGGGAGTTGGCTG +
Preference number: 2 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVAGCQGR*QAGSWL
Trigger: CAGCCAACTCCCCGCCTGGCAGCGGCCCTGGCACCC...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGCCACGTGTTGCATCTaGGCCGCCACTGCCGCCACC +
Preference number: 2 (lower is better)
Translates to: KAIPLLLARGPPGMAKARATCCI*AATAAT
Trigger: GGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGC...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCGCCGGGGCTCTGGGCTaGATAAGGGGAGAGCCCGTT +
Preference number: 2 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAAGALG*IRGEPV
Trigger: AACGGGCTCTCCCCTTATCCAGCCCAGAGCCCCGGC...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR CAA 90 bp CCCGCCTGGGGAAGCAGTGGTTCCACAGGAAAGGCAATCCCACTCTaGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGCCAAC +
Preference number: 2 (lower is better)
Translates to: PAWGSSGSTGKAIPL*LARGPPGMAKARAN
Trigger: GTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGCTTCCCCAGGCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: KAIPLLLARGPPGMAKARTSVRS*SFGKGC
Trigger: GCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGT...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGC +
Preference number: 2 (lower is better)
Translates to: SAGSPGQSLLTSPICSASWPAIC*IRRSAR
Trigger: GCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCA...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCTTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPALRRSP*HPQRPL
Trigger: CAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAA...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCACGAGGCGCCCGCCATaGTCCGGCTGCCGTGCAGAC +
Preference number: 2 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVATRRPP*SGCRAD
Trigger: GTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACT +
Preference number: 2 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAPNALC*FPWTVT
Trigger: AGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CCA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGCAATCCCACTCTTGCTaGCTAGGGGGCCTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: KAIPLLLARGPPGMAKARQSHSC*LGGLPG
Trigger: TCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTG...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp GGCCAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTTGGGGAGGCAATCCCACTCTTaGTGGCTAGGGGGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: GQPELCLGPLLGCTLSLGRQSHS*WLGGLP
Trigger: CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT...CCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTGGAAGGCGCCCAGGTaGCCGGCCATCTGCTGCATC +
Preference number: 2 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFWKAPR*PAICCI
Trigger: GATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp TGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCTCTTTCTGGGGGCCTCCCGGGATaGCAAAGGCCAGGGCCAACC +
Preference number: 2 (lower is better)
Translates to: CLPGLARERLRWPELPLSGGLPG*QRPGPT
Trigger: GGTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCC...AGAAAGAGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGAGACAGAAGGTAGCCTaGAGCAAGGGGACACTGGGA +
Preference number: 2 (lower is better)
Translates to: KAIPLLLARGPPGMAKARRQKVA*SKGTLG
Trigger: TCCCAGTGTCCCCTTGCTCCAGGCTACCTTCTGTCT...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCAGCAGGGCCGCCTaGTGCTGCAGGATCGCCGTG +
Preference number: 2 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNASRAA*CCRIAV
Trigger: CACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGC...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLTSVRS*SFGKGC
Trigger: GCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
3UTR-3UTR GCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 2 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGGGCCTTCTCTCTGCTaGTGGGGCAGGGCTGAAGGC +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLGPSLC*WGRAEG
Trigger: GCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR TCA 90 bp AGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGTTCTGGGATGCACTCTaGGTTTGGGGATTGTGGATT +
Preference number: 2 (lower is better)
Translates to: RQSHSCWLGGLPGWQRPGFWDAL*VWGLWI
Trigger: AATCCACAATCCCCAAACTCAGAGTGCATCCCAGAA...CCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR TCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCCCTCTACAGATATCCTaGATCTACTTTACAGGTGGG +
Preference number: 2 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPPLQIS*IYFTGG
Trigger: CCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGG...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGTCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPSFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPISFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACCCCAGGCACCAGCCTTaGGTCCGATCCACCTCCGTC +
Preference number: 2 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNPRHQP*VRSTSV
Trigger: GACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGG...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLLRRSP*HPQRPL
Trigger: CAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFSFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCCACAGCCCCCATCTaGCTAGGCTGGGGCTGTCAA +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSTAPI*LGWGCQ
Trigger: TTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGGATTGTGGGTTCACTaGTTCCATAACGTTCTCATT +
Preference number: 2 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPGLWVH*FHNVLI
Trigger: AATGAGAACGTTATGGAAGCAGTGAACCCACAATCC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGCCCAGGCACCAGCCTTaGGTCCGATCCACCTCCGTC +
Preference number: 2 (lower is better)
Translates to: HLIKTILRVALAPGTSLGPRHQP*VRSTSV
Trigger: GACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGG...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTGCTGCAGGATCGCCGTaGTGTAGGCGCCGCAGGCCC +
Preference number: 2 (lower is better)
Translates to: CGFTASITFSLPACEPRPAAGSP*CRRRRP
Trigger: GGGCCTGCGGCGCCTACACCACGGCGATCCTGCAGC...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAAAAGCTGTGCTCACTaGGGCATAGGCCGACGGATA +
Preference number: 2 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVAKSCAH*GIGRRI
Trigger: TATCCGTCGGCCTATGCCCCAGTGAGCACAGCTTTT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCT +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLLTSPI*SASLRS
Trigger: AGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR GCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGAGGCAATCCCACTCTTaGTGGCTAGGGGGCCTCCCG +
Preference number: 2 (lower is better)
Translates to: HLIKTILRVALAPGTSLGRQSHS*WLGGLP
Trigger: CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAGGGGGCCTCCCGGGATaGCAAAGGCCAGGGCCAACC +
Preference number: 2 (lower is better)
Translates to: SLLSQPSTDILNLLYRWAGGLPG*QRPGPT
Trigger: GGTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCC...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTGGGGCTGTCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 2 (lower is better)
Translates to: NETQNNLSTAPICLGWGCPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...ACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR GCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAGCAGGGCCGCCTGGTaGTGCAGGATCGCCGTGGTG +
Preference number: 2 (lower is better)
Translates to: SLLSQPSTDILNLLYRWASRAAW*CRIAVV
Trigger: CACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCT...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGGGGACACTGGGACTaGTTCAAGGGGAAGGGAAAC +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRGHWD*FKGKGN
Trigger: GTTTCCCTTCCCCTTGAACCAGTCCCAGTGTCCCCT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
3UTR-3UTR GCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTTCGGGGCCTTCTCTCTaGTGCTGGGGCAGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: CGFTASITFSLPACEPRPSGPSL*CWGRAE
Trigger: TTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCGA...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCACCCAGGCACCAGCCTTaGGTCCGATCCACCTCCGTC +
Preference number: 2 (lower is better)
Translates to: SLLSQPSTDILNLLYRWAPRHQP*VRSTSV
Trigger: GACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGG...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp TGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCTCTTTCTAGGGCTGAAGGCTGCTaGGGAAAAGCTGTGCTCACT +
Preference number: 2 (lower is better)
Translates to: CLPGLARERLRWPELPLSRAEGC*GKAVLT
Trigger: AGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCT...AGAAAGAGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR CAA 90 bp CAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTaGGGGATTGTGGATTGTGGGTTCACTGCTTCCATAACGTTCTCA +
Preference number: 2 (lower is better)
Translates to: QPELCLGPLLGCTLS*GIVDCGFTASITFS
Trigger: TGAGAACGTTATGGAAGCAGTGAACCCACAATCCACAATCCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR TCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTGAGGGCCGAATCCATTaGCCCCGATGGGCGCCGGAA +
Preference number: 2 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLEGRIH*PRWAPE
Trigger: TTCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTC...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp ATAGCAGTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGCCGCCATGGTCCGGCTaGCGTGCAGACCCCGGATGG +
Preference number: 2 (lower is better)
Translates to: IAVWALVGLSKLTNPKHLPPWSG*RADPGW
Trigger: CCATCCGGGGTCTGCACGGCAGCCGGACCATGGCGG...CAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACTGCTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp GTGGATTGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAATCTGGGCTTCCCTTaGGGAGAAGCCCTTGGCACC +
Preference number: 2 (lower is better)
Translates to: VDCGFTASITFSLPACEPNLGFP*GEALGT
Trigger: GGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATT...AGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACAATCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAATTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: SVVTALYRYPESTLQVGKLRRSP*HPQRPL
Trigger: CAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAA...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTCAATCCCACTCTTGCTaGCTAGGGGGCCTCCCGGGA +
Preference number: 2 (lower is better)
Translates to: SSKPSKSVVTALYRYPESQSHSC*LGGLPG
Trigger: TCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTG...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCACAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 2 (lower is better)
Translates to: SLLSQPSTDILNLLYRWAQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR GCA 90 bp GTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGCTCTGGCTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCT +
Preference number: 2 (lower is better)
Translates to: VWALVGLSKLTNPKHLLWLTSPI*SASLRS
Trigger: AGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAG...CCAGAGCAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp GGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGAAAGGCTGACCAAGGCAAGGGGATTGTGGGTTCACTaGTTCCATAACGTTCTCATT +
Preference number: 2 (lower is better)
Translates to: GKNMCKALQAQERLTKARGLWVH*FHNVLI
Trigger: AATGAGAACGTTATGGAAGCAGTGAACCCACAATCC...CCTTGCCTTGGTCAGCCTTTCCTGGGCCTGTAGGGCCTTGCACATATTTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR-3UTR GCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAAAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCG +
Preference number: 2 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKRWPAI*CIRRSA
Trigger: CGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCT...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CCA 90 bp GCTCACCAACTAGAAGCACCTCGGTTAAGCACATGTGAGACACTCTTGCATAGGTCTGTCTACCTGGATTaGCAAGGGAAAGGCTCAGGT +
Preference number: 2 (lower is better)
Translates to: AHQLEAPRLSTCETLLHRSVYLD*QGKGSG
Trigger: ACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGA...CCTATGCAAGAGTGTCTCACATGTGCTTAACCGAGGTGCTTCTAGTTGGTGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR-3UTR CCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTTTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTG +
Preference number: 2 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVLRRSP*HPQRPL
Trigger: CAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAA...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTAGCCTCAGCAACATCTaGGGATTAGAGGGACCCCAC +
Preference number: 2 (lower is better)
Translates to: SSKPSKSVVTALYRYPESSLSNI*GLEGPH
Trigger: GTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCT...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR-3UTR CCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTGTCAGTAAGGCCGGTTaGCATCCTTGGGCCGCTTTA +
Preference number: 2 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLVSKAG*HPWAAL
Trigger: TAAAGCGGCCCAAGGATGCCAACCGGCCTTACTGAC...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 2 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLSFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp ACAGACAGACAAAGACAGACAGACAGAGCACACACCACTTCTAAGCTCAACACTGGGGATTGTGGATTGTaGGTTCACTGCTTCCATAAC +
Preference number: 2 (lower is better)
Translates to: TDRQRQTDRAHTTSKLNTGDCGL*VHCFHN
Trigger: GTTATGGAAGCAGTGAACCCACAATCCACAATCCCC...AGTGTTGAGCTTAGAAGTGGTGTGTGCTCTGTCTGTCTGTCTTTGTCTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR-3UTR CCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAACCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACT +
Preference number: 2 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKPNALC*FPWTVT
Trigger: AGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGG...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGAAAGCAATAGTCCTTTaGTCCCTAAACTCTAAGGAA +
Preference number: 2 (lower is better)
Translates to: HLIKTILRVALAPGTSLGKAIVL*SLNSKE
Trigger: TTCCTTAGAGTTTAGGGACCAAAGGACTATTGCTTT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CCA 90 bp GTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGCTCTGGGGGGATTGTGGATTGTaGGTTCACTGCTTCCATAAC +
Preference number: 2 (lower is better)
Translates to: VWALVGLSKLTNPKHLLWGDCGL*VHCFHN
Trigger: GTTATGGAAGCAGTGAACCCACAATCCACAATCCCC...CCAGAGCAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR GCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAACAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 2 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 72 bp GCGGGGTGGAAGGCGCCCAGGTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGCTCCCGGTCGGTGTCC +
Preference number: 3 (lower is better)
Translates to: AGWKAPRWPAIC*IRRSARSRSVS
Trigger: GGACACCGACCGGGAGCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR GCA 72 bp AGAGGCGCAGCTACCAGGCTAAAGGCCGCCACGTGTTaGATCTGGGCCGCCACTGCCGCCACCGGGCCTAGG +
Preference number: 3 (lower is better)
Translates to: RGAATRLKAATC*IWAATAATGPR
Trigger: CCTAGGCCCGGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTTTAGCCTGGTAGCTGCGCCTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR-3UTR CAA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 3 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
68% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CAA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGCTGCCAGGCGGGGAGTaGGCTGCTGCCGCGGGCAAC +
Preference number: 3 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPLPGGE*AAAAGN
Trigger: GTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCAG...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR TCA 72 bp GGGGGCCTCCCGGGATGGCAAAGGCCAGGGCCAACCTaGGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCT +
Preference number: 3 (lower is better)
Translates to: GGLPGWQRPGPT*ALPGASSGMHS
Trigger: AGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 72 bp CCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCTaGTGGTTCCCCTGGACAGTCACTCCTCACCAGCCC +
Preference number: 3 (lower is better)
Translates to: PCGEALGTPNAL*WFPWTVTPHQP
Trigger: GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CAA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 3 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 72 bp CACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTG +
Preference number: 3 (lower is better)
Translates to: HQPWVRSTSVRS*SFGKGCSSVSV
Trigger: CACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR CCA 72 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTaGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGG +
Preference number: 3 (lower is better)
Translates to: AVVPQERQSHSC*LGGLPGWQRPG
Trigger: CCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CAA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 3 (lower is better)
Translates to: SAGSPGQSLLTSPICSASPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CAA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGAAATCTGGGCTTCCCTaGCGGAGAAGCCCTTGGCAC +
Preference number: 3 (lower is better)
Translates to: KAIPLLLARGPPGMAKARKSGLP*RRSPWH
Trigger: GTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTT...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CAA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAAGGCAATCCCACTCTaGCTGGCTAGGGGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVAKAIPL*LARGPP
Trigger: GGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CAA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCATCGGTGTCCGCCAGCTaGACCACGAGGCTGGACGAG +
Preference number: 3 (lower is better)
Translates to: PLLVPLDSHSSPALFALPSVSAS*TTRLDE
Trigger: CTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR GCA 72 bp GGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCTATGCTGCAGGCACAG +
Preference number: 3 (lower is better)
Translates to: GSPGQSLLTSPI*SASLRSMLQAQ
Trigger: CTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 72 bp GAAGCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTaGTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCA +
Preference number: 3 (lower is better)
Translates to: EAVVPQERQSHS*WLGGLPGWQRP
Trigger: TGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGCTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR CCA 72 bp AGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGAC +
Preference number: 3 (lower is better)
Translates to: RSKSGLPLRRSP*HPQRPLLVPLD
Trigger: GTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CAA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGTTTGGGGATTGTGGATaGTGGGTTCACTGCTTCCAT +
Preference number: 3 (lower is better)
Translates to: KAIPLLLARGPPGMAKARFGDCG*WVHCFH
Trigger: ATGGAAGCAGTGAACCCACAATCCACAATCCCCAAA...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 72 bp CCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCTGCAGGCACAGAACAA +
Preference number: 3 (lower is better)
Translates to: PWTVTPHQPYLL*QPALYAAGTEQ
Trigger: TTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 72 bp GGCCAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATaGACTCTGAGTTTGGGGATTGTGGATTGTGGGTTC +
Preference number: 3 (lower is better)
Translates to: GQPELCLGPLLG*TLSLGIVDCGF
Trigger: GAACCCACAATCCACAATCCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR CCA 72 bp CAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTaGGGCTGTCAAGGGTCTCCTTCACCCTGTCTCCTA +
Preference number: 3 (lower is better)
Translates to: QNNLSTAPICLG*GCQGSPSPCLL
Trigger: TAGGAGACAGGGTGAAGGAGACCCTTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR CCA 72 bp GTTATCAGATCAGAGGCCTTCAGCCTCAGCAACATCTaGGGATTAGAGGGACCCCACACAGCTGGGGCCTCA +
Preference number: 3 (lower is better)
Translates to: VIRSEAFSLSNI*GLEGPHTAGAS
Trigger: TGAGGCCCCAGCTGTGTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCTGAAGGCCTCTGATCTGATAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR TCA 72 bp CTGAGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTaGGTTTGGGGATTGTGGATTGTGGGTTCACTGCTT +
Preference number: 3 (lower is better)
Translates to: LSSAWGLFWDAL*VWGLWIVGSLL
Trigger: AAGCAGTGAACCCACAATCCACAATCCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR GCA 72 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTaGCTAGGCTGGGGCTGTCAAGGGTCTCCTTCACCC +
Preference number: 3 (lower is better)
Translates to: NETQNNLSTAPI*LGWGCQGSPSP
Trigger: GGGTGAAGGAGACCCTTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CAA 90 bp CACATCTTTTACTATCTGACATGTTATCAGATCAGAGGCCTTCAGCCTCAGCAACTTGCGGAGAAGCCCTaGGCACCCCCAACGCCCTCT +
Preference number: 3 (lower is better)
Translates to: HIFYYLTCYQIRGLQPQQLAEKP*APPTPS
Trigger: AGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAG...TTGCTGAGGCTGAAGGCCTCTGATCTGATAACATGTCAGATAGTAAAAGATGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR TCA 72 bp AAAATATGTGCAAGGCCCTACAGGCCCAGGAAAGGCTaGCCAAGGCAAGGTGAGTCATGGTGTTCTAAGCTG +
Preference number: 3 (lower is better)
Translates to: KICARPYRPRKG*PRQGESWCSKL
Trigger: CAGCTTAGAACACCATGACTCACCTTGCCTTGGTCAGCCTTTCCTGGGCCTGTAGGGCCTTGCACATATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
3UTR TCA 72 bp CTTCTCACTCTTCTGTTTCTTTCTGTGGCTGGTCAGTaGAAGCAGGTCAGTAAGGCCGGTTGGCATCCTTGG +
Preference number: 3 (lower is better)
Translates to: LLTLLFLSVAGQ*KQVSKAGWHPW
Trigger: CCAAGGATGCCAACCGGCCTTACTGACCTGCTTTCACTGACCAGCCACAGAAAGAAACAGAAGAGTGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437872.7
3UTR GCA 72 bp CCAGCCCTATTTGCTCTGCCAGCCTGCGCTCTATGCTaGAGGCACAGAACAACCCACTTGATAAAAACAATC +
Preference number: 3 (lower is better)
Translates to: PALFALPACALC*RHRTTHLIKTI
Trigger: GATTGTTTTTATCAAGTGGGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR GCA 72 bp TCACCAGCCCTATTTGCTCTGCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACCCACTTGATAAAAACA +
Preference number: 3 (lower is better)
Translates to: SPALFALPACAL*CRHRTTHLIKT
Trigger: TGTTTTTATCAAGTGGGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR-3UTR CAA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTGGATGCACTCTGAGTTaGGGGATTGTGGATTGTGGG +
Preference number: 3 (lower is better)
Translates to: CGFTASITFSLPACEPRPGCTLS*GIVDCG
Trigger: CCCACAATCCACAATCCCCAAACTCAGAGTGCATCC...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR-3UTR CAA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAAAGAGGGCCGAATCCATaGACCCCGATGGGCGCCGGA +
Preference number: 3 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKRGPNP*TPMGAG
Trigger: TCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTCT...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR GCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSWPAIC*IRRSAR
Trigger: GCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCA...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGGCGCCGGAAGACCTaGGAGGGTGCCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSGRRKT*EGARAA
Trigger: AGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCC...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPWPAIC*IRRSAR
Trigger: GCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCA...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSRWPAI*CIRRSA
Trigger: CGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCT...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGCTGCAGGATCGCCGTaGTGTAGGCGCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSAAGSP*CRRRRP
Trigger: GGGCCTGCGGCGCCTACACCACGGCGATCCTGCAGC...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGGGCGCCGGAAGACCTaGGAGGGTGCCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPGRRKT*EGARAA
Trigger: AGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCCCGCCATGGTCCGGCTaGCGTGCAGACCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPPPWSG*RADPGW
Trigger: CCATCCGGGGTCTGCACGGCAGCCGGACCATGGCGG...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFRWPAI*CIRRSA
Trigger: CGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCT...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCACGAGGCGCCCGCCATaGTCCGGCTGCCGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPTRRPP*SGCRAD
Trigger: GTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGT...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGCCAGCAGGGCCGCCTaGTGCTGCAGGATCGCCGTG +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPASRAA*CCRIAV
Trigger: CACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCTAGCGGCAGTGGCGCGGGGTGGAAGGCGCCCAGGTGGCCGGCCATCTGCTGCTCGTGCAGTGCACTCTaGGCCTTGAGAGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: PSGSGAGWKAPRWPAICCSCSAL*ALRAES
Trigger: GGACTCTGCTCTCAAGGCCCAGAGTGCACTGCACGA...GCAGCAGATGGCCGGCCACCTGGGCGCCTTCCACCCCGCGCCACTGCCGCTAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCACGAGGCGCCCGCCATaGTCCGGCTGCCGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPATRRPP*SGCRAD
Trigger: GTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGT...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGGCTGCAGGATCGCCGTaGTGTAGGCGCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: RQSHSCWLGGLPGWQRPGAAGSP*CRRRRP
Trigger: GGGCCTGCGGCGCCTACACCACGGCGATCCTGCAGC...CCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGCCACGTGTTGCATCTaGGCCGCCACTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPATCCI*AATAAT
Trigger: GGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCTGCCAGGCGGGGAGTTaGCTGCCGCGGGCAACAGAG +
Preference number: 4 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFCQAGS*LPRATE
Trigger: CTCTGTTGCCCGCGGCAGCCAACTCCCCGCCTGGCA...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS-3UTR TCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGCTGGAACAGGCGTCTaGCGTCCTCCTCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSAGTGV*RPPHPA
Trigger: AGCAGGGTGAGGAGGACGTCAGACGCCTGTTCCAGC...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGAGGGCCGAATCCATTaGCCCCGATGGGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFEGRIH*PRWAPE
Trigger: TTCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTC...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGAAGGCCGCCACGTGTTaGATCTGGGCCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGKAATC*IWAATA
Trigger: GGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTT...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCAAGGCCGCCACGTGTTaGATCTGGGCCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFKAATC*IWAATA
Trigger: GGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTT...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGGTGCCAGGGCCGCTaGCAGGCGGGGAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPGCQGR*QAGSWL
Trigger: CAGCCAACTCCCCGCCTGGCAGCGGCCCTGGCACCC...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTGGGTGCCAGGGCCGCTaGCAGGCGGGGAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIGCQGR*QAGSWL
Trigger: CAGCCAACTCCCCGCCTGGCAGCGGCCCTGGCACCC...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGTCGGGGCCTTCTCTCTaGTGCTGGGGCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSSGPSL*CWGRAE
Trigger: TTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCGA...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGTSVRS*SFGKGC
Trigger: GCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGT...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp ACCACGAGGCTGGACGAGGCGCCCGCCATGGTCCGGCTGCCGTGCAGACCCCGGCAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 4 (lower is better)
Translates to: TTRLDEAPAMVRLPCRPRQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...CCGGGGTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGTCCAGCCTCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR TCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTTTGTGGAGGCCGGTaGGCCGGTCCTTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPALCGGR*AGPSAP
Trigger: CGGTGCTGAAGGACCGGCTCACCGGCCTCCACAAAG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGGGTGCCAGGGCCGCTaGCAGGCGGGGAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFGCQGR*QAGSWL
Trigger: CAGCCAACTCCCCGCCTGGCAGCGGCCCTGGCACCC...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGTCGGGGCCTTCTCTCTaGTGCTGGGGCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGSGPSL*CWGRAE
Trigger: TTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCGA...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGTGCAGACCCCGGATaGCCGCCTGAGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPARADPG*PPELPL
Trigger: AAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTACGAGGCGCCCGCCATaGTCCGGCTGCCGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPITRRPP*SGCRAD
Trigger: GTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGT...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCCCAGGCACCAGCCTTaGGTCCGATCCACCTCCGTC +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAPRHQP*VRSTSV
Trigger: GACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGCCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACT +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSPNALC*FPWTVT
Trigger: AGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGG...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCACGTCCTCCTCACCCTaGTGCTTGCCCAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPATSSSP*CLPSIP
Trigger: GGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGACGT...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGGACTCCGCAGGACCGTaGACTCCTCGATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGDSAGP*TPRCGQ
Trigger: TTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTC...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTCCACAGCCCCCATCTaGCTAGGCTGGGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPSTAPI*LGWGCQ
Trigger: TTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGA...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCCTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFLLGPH*QLASLG
Trigger: TCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAG...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGATGTGGCCAAAGGGCTaGAACAGGCGTCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSMWPKG*NRRLTS
Trigger: GGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACAT...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCGCCAGCAGGGCCGCCTaGTGCTGCAGGATCGCCGTG +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICASRAA*CCRIAV
Trigger: CACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGC...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGTGCCAGGCGGGGAGTTaGCTGCTGCCGCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPCQAGS*LLPRAT
Trigger: TGTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCA...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCAGGCGGGGAGTTaGCTGCTGCCGCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPICQAGS*LLPRAT
Trigger: TGTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCA...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
CDS-3UTR CCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGGGCGCCGGAAGACCTaGGAGGGTGCCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPGRRKT*EGARAA
Trigger: AGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCC...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCGGCTGGCCATTGGTCTaGGGGGTCAGAGGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAGWPLV*GVRGPN
Trigger: ATTCGGCCCTCTGACCCCCCAGACCAATGGCCAGCC...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGAACCTGAGCTCTGCCTaGGGCCTCTTCTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSNLSSA*GLFWDA
Trigger: TGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTT...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGCTTTCGGTCCTCCCTaGCAGGGTCTTCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFAFGPP*QGLLLV
Trigger: CACGAGCAGAAGACCCTGCCAGGGAGGACCGAAAGC...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR TCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGTCTGTGGCTGGTCAGTaGAAGCAGGTCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSSVAGQ*KQVSKA
Trigger: GGCCTTACTGACCTGCTTTCACTGACCAGCCACAGA...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGGCCAGGGCCAACCTaGGCTCTGCCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVARPGPT*ALPGAS
Trigger: AGAGGCCCCAGGCAGAGCTCAGGTTGGCCCTGGCCT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCGGTTTAGCCCGCTCATaGCGACGCCGCTGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACGLARS*RRRCPR
Trigger: CCGCGGACAGCGGCGTCGGCATGAGCGGGCTAAACC...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCCACAGCCTTTACTGGTaGCGTCAGGACTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPHSLYW*RQDSAG
Trigger: TCCTGCGGAGTCCTGACGGCACCAGTAAAGGCTGTG...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCAGCAGGGCCGCCTGGTaGTGCAGGATCGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACSRAAW*CRIAVV
Trigger: CACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCT...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCGGCAGGGCTGAAGGCTaGTGGGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAGRAEG*WGKAVL
Trigger: GAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCC...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGAGGCACAGCCTTTACTaGTGCCGTCAGGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGRHSLY*CRQDSA
Trigger: TGCGGAGTCCTGACGGCACCAGTAAAGGCTGTGCCT...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCAGGCACAGCCTTTACTaGTGCCGTCAGGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPRHSLY*CRQDSA
Trigger: TGCGGAGTCCTGACGGCACCAGTAAAGGCTGTGCCT...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGCGTGCAGACCCCGGATaGCCGCCTGAGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPRADPG*PPELPL
Trigger: AAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACG...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGGAAGGCGCCCAGGTaGCCGGCCATCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIWKAPR*PAICCI
Trigger: GATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCA...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCGCTGCAGGATCGCCGTaGTGTAGGCGCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASAAGSP*CRRRRP
Trigger: GGGCCTGCGGCGCCTACACCACGGCGATCCTGCAGC...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTGCCAGGCGGGGAGTTaGCTGCTGCCGCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICCQAGS*LLPRAT
Trigger: TGTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCA...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
CDS-3UTR TCA 90 bp GAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCGAGGGCCGAATCCATTaGCCCCGATGGGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: EVNLGFPCGEALGTPNALEGRIH*PRWAPE
Trigger: TTCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTC...GAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCAGGCCAGGGCCAACCTaGGCTCTGCCTGGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLRPGPT*ALPGAS
Trigger: AGAGGCCCCAGGCAGAGCTCAGGTTGGCCCTGGCCT...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCACAGCCTTTACTGGTaGCGTCAGGACTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAHSLYW*RQDSAG
Trigger: TCCTGCGGAGTCCTGACGGCACCAGTAAAGGCTGTG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLWPAIC*IRRSAR
Trigger: GCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAAGCAGGGCCGCCTGGTaGTGCAGGATCGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPSRAAW*CRIAVV
Trigger: CACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCT...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGGGTGCCAGGGCCGCTaGCAGGCGGGGAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLGCQGR*QAGSWL
Trigger: CAGCCAACTCCCCGCCTGGCAGCGGCCCTGGCACCC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGGGCCTTCTCTCTGCTaGTGGGGCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFGPSLC*WGRAEG
Trigger: GCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCC...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCGGGCCTTCTCTCTGCTaGTGGGGCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACGPSLC*WGRAEG
Trigger: GCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCC...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCTGAACGCTGGGGTCTaGCTTGAGGTCCCCGTGCGG +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFLNAGV*LEVPVR
Trigger: CCGCACGGGGACCTCAAGCCAGACCCCAGCGTTCAG...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGAAGGCACAGCCTTTGTaGAGGCCGGTGAGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPKAQPL*RPVSRS
Trigger: GGACCGGCTCACCGGCCTCCACAAAGGCTGTGCCTT...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCATGTGGCCAAAGGGCTaGAACAGGCGTCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAMWPKG*NRRLTS
Trigger: GGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACAT...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCCGTGCAGACCCCGGATaGCCGCCTGAGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: EVNLGFPCGEALGTPNALRADPG*PPELPL
Trigger: AAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACG...GAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTGGAAGGCGCCCAGGTaGCCGGCCATCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICWKAPR*PAICCI
Trigger: GATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCA...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCGCCACGTGTTGCATCTaGGCCGCCACTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASATCCI*AATAAT
Trigger: GGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGC...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGGGCGCCGGAAGACCTaGGAGGGTGCCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLGRRKT*EGARAA
Trigger: AGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCGCCGGGGCTCTGGGCTaGATAAGGGGAGAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACAGALG*IRGEPV
Trigger: AACGGGCTCTCCCCTTATCCAGCCCAGAGCCCCGGC...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGTCAGTAAGGCCGGTTaGCATCCTTGGGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPVSKAG*HPWAAL
Trigger: TAAAGCGGCCCAAGGATGCCAACCGGCCTTACTGAC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCCCCAGGCACCAGCCTTaGGTCCGATCCACCTCCGTC +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACPRHQP*VRSTSV
Trigger: GACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGG...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPILRRSP*HPQRPL
Trigger: CAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAA...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCGAGGGCCGAATCCATTaGCCCCGATGGGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASEGRIH*PRWAPE
Trigger: TTCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTC...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTATGGTCCGGCTGCCGTaGAGACCCCGGATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLMVRLP*RPRMAA
Trigger: GGCGGCCATCCGGGGTCTGCACGGCAGCCGGACCAT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp GGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGAAAGGCTGACCAAGGCAAGGCCGCCATGGTCCGGCTaGCGTGCAGACCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: GKNMCKALQAQERLTKARPPWSG*RADPGW
Trigger: CCATCCGGGGTCTGCACGGCAGCCGGACCATGGCGG...CCTTGCCTTGGTCAGCCTTTCCTGGGCCTGTAGGGCCTTGCACATATTTTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCCGCCATGGTCCGGCTaGCGTGCAGACCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLPPWSG*RADPGW
Trigger: CCATCCGGGGTCTGCACGGCAGCCGGACCATGGCGG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRWPAI*CIRRSA
Trigger: CGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGCAGGGCTGAAGGCTaGTGGGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPGRAEG*WGKAVL
Trigger: GAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCC...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTGGCAGGGCTGAAGGCTaGTGGGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIGRAEG*WGKAVL
Trigger: GAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCC...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGGGCCTTCTCTCTGCTaGTGGGGCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPGPSLC*WGRAEG
Trigger: GCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCC...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCTCGGGGCCTTCTCTCTaGTGCTGGGGCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACSGPSL*CWGRAE
Trigger: TTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCGA...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTCGGGGCCTTCTCTCTaGTGCTGGGGCAGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFSGPSL*CWGRAE
Trigger: TTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCCCGA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGCTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: KAIPLLLARGPPGMAKARLTSPI*SASLRS
Trigger: AGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAG...CCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTACGAGGCGCCCGCCATaGTCCGGCTGCCGTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLTRRPP*SGCRAD
Trigger: GTCTGCACGGCAGCCGGACCATGGCGGGCGCCTCGT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGGAAGGCGCCCAGGTaGCCGGCCATCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLWKAPR*PAICCI
Trigger: GATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCA...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCTGCAGGATCGCCGTaGTGTAGGCGCCGCAGGCCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLAAGSP*CRRRRP
Trigger: GGGCCTGCGGCGCCTACACCACGGCGATCCTGCAGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCCAGCAGGGCCGCCTaGTGCTGCAGGATCGCCGTG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLASRAA*CCRIAV
Trigger: CACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCACCCAGGCACCAGCCTTaGGTCCGATCCACCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPPRHQP*VRSTSV
Trigger: GACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGG...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTTGCGGAGAAGCCCTTaGCACCCCCAACGCCCTCTG +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFLRRSP*HPQRPL
Trigger: CAGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
3UTR CAA 72 bp GGAAGCAGTGGTTCCACAGGAAAGGCAATCCCACTCTaGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCC +
Preference number: 4 (lower is better)
Translates to: GSSGSTGKAIPL*LARGPPGMAKA
Trigger: GGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCGCTGGAACAGGCGTCTaGCGTCCTCCTCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLAGTGV*RPPHPA
Trigger: AGCAGGGTGAGGAGGACGTCAGACGCCTGTTCCAGC...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGCAGGAATGTCTGTATaGGTTCCGCATCACCAAACT +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSAGMSV*VPHHQT
Trigger: AGTTTGGTGATGCGGAACTCATACAGACATTCCTGC...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AGATCAGAGGCCTTCAGCCTCAGCAACATCTGGGGATTAGAGGGACCCCACACAGGCTTGAGGTCCCCGTaGGGCTCTCTCTGGGCTCCC +
Preference number: 4 (lower is better)
Translates to: RSEAFSLSNIWGLEGPHTGLRSP*GSLWAP
Trigger: GGGAGCCCAGAGAGAGCCGCACGGGGACCTCAAGCC...TGTGTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCTGAAGGCCTCTGATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGGTTTAGCCCGCTCATaGCGACGCCGCTGTCCGCGG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLGLARS*RRRCPR
Trigger: CCGCGGACAGCGGCGTCGGCATGAGCGGGCTAAACC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCCTGGCAGGGTCTTCTaGTCGTGCAGTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFPGRVF*SCSALW
Trigger: CCAGAGTGCACTGCACGAGCAGAAGACCCTGCCAGG...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCTCCTCCTCACCCTGCTaGTTGCCCAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVASSSPC*LPSIPT
Trigger: TGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGA...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGTGGCCGGCCATCTGCTaGATCCGCCGCAGCGCGCGC +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGWPAIC*IRRSAR
Trigger: GCGCGCGCTGCGGCGGATGCAGCAGATGGCCGGCCA...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNRWPAI*CIRRSA
Trigger: CGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCT...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGCAGGGCCGCCTGGTaGTGCAGGATCGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSRAAW*CRIAVV
Trigger: CACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGCAAACCCAAAACACTTaGTCTGGTTGGTGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSQTQNT*SGWWLD
Trigger: ATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTG...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp GGGTGGAGGGGAAATCCTCCTGGGAAAAATATGTGCAAGGCCCTACAGGCCCAGACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GWRGNPPGKNMCKALQAQTSVRS*SFGKGC
Trigger: GCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGT...CTGGGCCTGTAGGGCCTTGCACATATTTTTCCCAGGAGGATTTCCCCTCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTATGTGGCCAAAGGGCTaGAACAGGCGTCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIMWPKG*NRRLTS
Trigger: GGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACAT...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCCACGTGTTGCATCTaGGCCGCCACTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLATCCI*AATAAT
Trigger: GGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTGCCAGGCGGGGAGTTaGCTGCTGCCGCGGGCAACA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLCQAGS*LLPRAT
Trigger: TGTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGGGGCGCCGGAAGACCTaGGAGGGTGCCAGGGCCGCT +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGGRRKT*EGARAA
Trigger: AGCGGCCCTGGCACCCTCCCAGGTCTTCCGGCGCCC...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCCCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACT +
Preference number: 4 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVAPNALC*FPWTVT
Trigger: AGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGG...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACT +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICPNALC*FPWTVT
Trigger: AGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGG...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGCAGCTGGCTTCACTTaGATCGGACGATTCATCTTC +
Preference number: 4 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPAAGFT*IGRFIF
Trigger: GAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR TCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCTTTGTGGAGGCCGGTaGGCCGGTCCTTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLLCGGR*AGPSAP
Trigger: CGGTGCTGAAGGACCGGCTCACCGGCCTCCACAAAG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000437872.7
ENST00000567083.2
CDS-3UTR TCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGAGGGCCGAATCCATTaGCCCCGATGGGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLEGRIH*PRWAPE
Trigger: TTCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR TCA 90 bp GGCCAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTTGGGGTCTGTGGCTGGTCAGTaGAAGCAGGTCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: GQPELCLGPLLGCTLSLGSVAGQ*KQVSKA
Trigger: GGCCTTACTGACCTGCTTTCACTGACCAGCCACAGA...CCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCTCCTCCTCACCCTGCTaGTTGCCCAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASSSSPC*LPSIPT
Trigger: TGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGA...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCGACTCCGCAGGACCGTaGACTCCTCGATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLDSAGP*TPRCGQ
Trigger: TTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTC...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGATGGTCCGGCTGCCGTaGAGACCCCGGATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGMVRLP*RPRMAA
Trigger: GGCGGCCATCCGGGGTCTGCACGGCAGCCGGACCAT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACCGCCATGGTCCGGCTaGCGTGCAGACCCCGGATGG +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQPPWSG*RADPGW
Trigger: CCATCCGGGGTCTGCACGGCAGCCGGACCATGGCGG...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAAGGCCGCCACGTGTTaGATCTGGGCCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLKAATC*IWAATA
Trigger: GGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCGGCAGGGCTGAAGGCTaGTGGGGAAAAGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASGRAEG*WGKAVL
Trigger: GAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCTGCC...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTCAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCCTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACLTSPI*SASLRS
Trigger: AGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAG...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCAATCTGGGCTTCCCTTaGGGAGAAGCCCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACNLGFP*GEALGT
Trigger: GGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATT...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCGTCGTGGTCCTTCATaGGTACGGCGGGACCGGGGT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRRGPS*VRRDRG
Trigger: ACCCCGGTCCCGCCGTACCCATGAAGGACCACGACG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACG +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLALTGS*LHLDRT
Trigger: CGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGC...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACG +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASALTGS*LHLDRT
Trigger: CGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGC...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCACTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPLLGPH*QLASLG
Trigger: TCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAG...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCGTGCAGACCCCGGATaGCCGCCTGAGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRADPG*PPELPL
Trigger: AAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTGGAAGGCGCCCAGGTaGCCGGCCATCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLWKAPR*PAICCI
Trigger: GATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCCGGGGCTCTGGGCTaGATAAGGGGAGAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLAGALG*IRGEPV
Trigger: AACGGGCTCTCCCCTTATCCAGCCCAGAGCCCCGGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CCA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAACCTGAGCTCTGCCTaGGGCCTCTTCTGGGATGCA +
Preference number: 4 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVANLSSA*GLFWDA
Trigger: TGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTCTCTTTCTTCCCGCCTaGGGAAGCAGTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPILFLPA*GSSGST
Trigger: TGTGGAACCACTGCTTCCCCAGGCGGGAAGAAAGAG...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTAGGGGACACTGGGACTaGTTCAAGGGGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIRGHWD*FKGKGN
Trigger: GTTTCCCTTCCCCTTGAACCAGTCCCAGTGTCCCCT...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp GGCCAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTTGGGGAGACAGAAGGTAGCCTaGAGCAAGGGGACACTGGGA +
Preference number: 4 (lower is better)
Translates to: GQPELCLGPLLGCTLSLGRQKVA*SKGTLG
Trigger: TCCCAGTGTCCCCTTGCTCCAGGCTACCTTCTGTCT...CCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR CAA 72 bp CAGCTCAGCCAAAGGCAGGGCCTCTGTCTACCTGGATaGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCT +
Preference number: 4 (lower is better)
Translates to: QLSQRQGLCLPG*ARERLRWPELP
Trigger: AGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGGCTGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAGTGCACTCTGGGCCTTaGGAGCAGAGTCCCGGGCGC +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQVHSGP*EQSPGR
Trigger: GCGCCCGGGACTCTGCTCTCAAGGCCCAGAGTGCAC...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCTGGAACAGGCGTCTaGCGTCCTCCTCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLAGTGV*RPPHPA
Trigger: AGCAGGGTGAGGAGGACGTCAGACGCCTGTTCCAGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR TCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCGCAGGAATGTCTGTATaGGTTCCGCATCACCAAACT +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAAGMSV*VPHHQT
Trigger: AGTTTGGTGATGCGGAACTCATACAGACATTCCTGC...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCTCTGTGGCTGGTCAGTaGAAGCAGGTCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACSVAGQ*KQVSKA
Trigger: GGCCTTACTGACCTGCTTTCACTGACCAGCCACAGA...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGTGGCTTAAGAGGGAATaGGACACAGAACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSWLKRE*DTEQSF
Trigger: GAAAGATTGTTCTGTGTCTCATTCCCTCTTAAGCCA...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGCCTCTACAGATATCCTaGATCTACTTTACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGPLQIS*IYFTGG
Trigger: CCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGG...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTACGTCCTCCTCACCCTaGTGCTTGCCCAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLTSSSP*CLPSIP
Trigger: GGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGACGT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCACAGCCTTTACTGGTaGCGTCAGGACTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASHSLYW*RQDSAG
Trigger: TCCTGCGGAGTCCTGACGGCACCAGTAAAGGCTGTG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTGGGGCTGTAAGGCCGCCACGTGTTaGATCTGGGCCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: NETQNNLSTAPICLGWGCKAATC*IWAATA
Trigger: GGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTT...ACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACAAGGCCGCCACGTGTTaGATCTGGGCCGCCACTGCC +
Preference number: 4 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNKAATC*IWAATA
Trigger: GGCAGTGGCGGCCCAGATGCAACACGTGGCGGCCTT...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTGGGTGCCAGGGCCGCTaGCAGGCGGGGAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: CGFTASITFSLPACEPRPGCQGR*QAGSWL
Trigger: CAGCCAACTCCCCGCCTGGCAGCGGCCCTGGCACCC...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCCAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASLTSPI*SASLRS
Trigger: AGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCACTCACCAGCCCTATTTaGTCTGCCAGCCTGCGCTCT +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPLTSPI*SASLRS
Trigger: AGAGCGCAGGCTGGCAGAGCAAATAGGGCTGGTGAG...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAAATCTGGGCTTCCCTTaGGGAGAAGCCCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPNLGFP*GEALGT
Trigger: GGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATT...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCTGCCAAGAGCTGGGTaGGTGGGAGGTGAGGAATTA +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFLPRAG*VGGEEL
Trigger: TAATTCCTCACCTCCCACGCACCCAGCTCTTGGCAG...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTCGTGCAGTGCACTCTaGGCCTTGAGAGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLSCSAL*ALRAES
Trigger: GGACTCTGCTCTCAAGGCCCAGAGTGCACTGCACGA...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCTCTTTCTCGTGCAGACCCCGGATaGCCGCCTGAGCTTCCCCTT +
Preference number: 4 (lower is better)
Translates to: CLPGLARERLRWPELPLSRADPG*PPELPL
Trigger: AAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACG...AGAAAGAGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAGCCACGTGTTGCATCTaGGCCGCCACTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQATCCI*AATAAT
Trigger: GGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGC...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGGCTGGCCATTGGTCTaGGGGGTCAGAGGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLGWPLV*GVRGPN
Trigger: ATTCGGCCCTCTGACCCCCCAGACCAATGGCCAGCC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCGTCAGTAAGGCCGGTTaGCATCCTTGGGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICVSKAG*HPWAAL
Trigger: TAAAGCGGCCCAAGGATGCCAACCGGCCTTACTGAC...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCAATCCCACTCTTGCTaGCTAGGGGGCCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLQSHSC*LGGLPG
Trigger: TCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp GGGTGGAGGGGAAATCCTCCTGGGAAAAATATGTGCAAGGCCCTACAGGCCCAGTCCATGCCTGTGGGGTaGAGGGGAAATCCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GWRGNPPGKNMCKALQAQSMPVG*RGNPPG
Trigger: CCCAGGAGGATTTCCCCTCCACCCCACAGGCATGGA...CTGGGCCTGTAGGGCCTTGCACATATTTTTCCCAGGAGGATTTCCCCTCCACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTCTCATGGGTGTTGTaGGGATCACATGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPALSWVL*GSHEVM
Trigger: CATTACCTCATGTGATCCCCACAACACCCATGAGAG...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCGACGGATAGGCTGCTaGATAAGGGGAGAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASRRIGC*IRGEPV
Trigger: AACGGGCTCTCCCCTTATCCAGCAGCCTATCCGTCG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS-3UTR TCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCTGGAACAGGCGTCTaGCGTCCTCCTCACCCTGCT +
Preference number: 4 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNAGTGV*RPPHPA
Trigger: AGCAGGGTGAGGAGGACGTCAGACGCCTGTTCCAGC...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAGAGGGCCGAATCCATTaGCCCCGATGGGCGCCGGAA +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQEGRIH*PRWAPE
Trigger: TTCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTC...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGTGGCTTAAGAGGGAATaGGACACAGAACAATCTTTC +
Preference number: 4 (lower is better)
Translates to: APALGPIHLRPQLLLREGWLKRE*DTEQSF
Trigger: GAAAGATTGTTCTGTGTCTCATTCCCTCTTAAGCCA...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCCTCCTCACCCTGCTaGTTGCCCAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSSSPC*LPSIPT
Trigger: TGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGACTCCGCAGGACCGTaGACTCCTCGATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLDSAGP*TPRCGQ
Trigger: TTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICSFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGTSVRS*SFGKGC
Trigger: GCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGTCGTGGTCCTTCATaGGTACGGCGGGACCGGGGT +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQRRGPS*VRRDRG
Trigger: ACCCCGGTCCCGCCGTACCCATGAAGGACCACGACG...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLALTGS*LHLDRT
Trigger: CGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp GGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGAAAGGCTGACCAAGGCAAGGCTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: GKNMCKALQAQERLTKARLLGPH*QLASLG
Trigger: TCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAG...CCTTGCCTTGGTCAGCCTTTCCTGGGCCTGTAGGGCCTTGCACATATTTTTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLLLGPH*QLASLG
Trigger: TCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAATGGAAGGCGCCCAGGTaGCCGGCCATCTGCTGCATC +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQWKAPR*PAICCI
Trigger: GATGCAGCAGATGGCCGGCCACCTGGGCGCCTTCCA...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GCTCACCAACTAGAAGCACCTCGGTTAAGCACATGTGAGACACTCTTGCATAGGGCCACGTGTTGCATCTaGGCCGCCACTGCCGCCACC +
Preference number: 4 (lower is better)
Translates to: AHQLEAPRLSTCETLLHRATCCI*AATAAT
Trigger: GGTGGCGGCAGTGGCGGCCCAGATGCAACACGTGGC...CCTATGCAAGAGTGTCTCACATGTGCTTAACCGAGGTGCTTCTAGTTGGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAGCCGGGGCTCTGGGCTaGATAAGGGGAGAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQAGALG*IRGEPV
Trigger: AACGGGCTCTCCCCTTATCCAGCCCAGAGCCCCGGC...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
CDS-3UTR CCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCAAAAGCTGTGCTCACTaGGGCATAGGCCGACGGATA +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACKSCAH*GIGRRI
Trigger: TATCCGTCGGCCTATGCCCCAGTGAGCACAGCTTTT...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCAGGGCTGAAGGCTGCTaGGGAAAAGCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLRAEGC*GKAVLT
Trigger: AGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCT...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCTGTCTACCTGGATTaGCAAGGGAAAGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPISVYLD*QGKGSG
Trigger: ACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGA...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTGCAGCTGGCTTCACTTaGATCGGACGATTCATCTTC +
Preference number: 4 (lower is better)
Translates to: PPTPSAGSPGQSLLTSPIAAGFT*IGRFIF
Trigger: GAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGC...AATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR TCA 90 bp GGCCAACCTGAGCTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTTGGGGTTCTGGGATGCACTCTaGGTTTGGGGATTGTGGATT +
Preference number: 4 (lower is better)
Translates to: GQPELCLGPLLGCTLSLGFWDAL*VWGLWI
Trigger: AATCCACAATCCCCAAACTCAGAGTGCATCCCAGAA...CCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAGCTCAGGTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACTCCTCCTCACCCTGCTaGTTGCCCAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNSSSPC*LPSIPT
Trigger: TGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGA...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGACTCCGCAGGACCGTaGACTCCTCGATGTGGCCAA +
Preference number: 4 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNDSAGP*TPRCGQ
Trigger: TTGGCCACATCGAGGAGTGCACGGTCCTGCGGAGTC...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCACAGCCTTTACTGGTaGCGTCAGGACTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLHSLYW*RQDSAG
Trigger: TCCTGCGGAGTCCTGACGGCACCAGTAAAGGCTGTG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAATGGTCCGGCTGCCGTaGAGACCCCGGATGGCCGCC +
Preference number: 4 (lower is better)
Translates to: SLLSQPSTDILNLLYRWAMVRLP*RPRMAA
Trigger: GGCGGCCATCCGGGGTCTGCACGGCAGCCGGACCAT...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCATCCTTCGGGAAGGGCTaGTCAAGCGTTTCTGTGCTT +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPSFGKG*SSVSVL
Trigger: AAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGA...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTGGGGCTGTTCCACAGCCCCCATCTaGCTAGGCTGGGGCTGTCAA +
Preference number: 4 (lower is better)
Translates to: NETQNNLSTAPICLGWGCSTAPI*LGWGCQ
Trigger: TTGACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGA...ACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCGTGCAGTGCACTCTaGGCCTTGAGAGCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSCSAL*ALRAES
Trigger: GGACTCTGCTCTCAAGGCCCAGAGTGCACTGCACGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCGGACGATTCATCCCTaGCAGGGTCTTCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRTIHP*QGLLLV
Trigger: CACGAGCAGAAGACCCTGCCAGGGATGAATCGTCCG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTATGTGGCCAAAGGGCTaGAACAGGCGTCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLMWPKG*NRRLTS
Trigger: GGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACAT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGGCACAGCCTTTACTaGTGCCGTCAGGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRHSLY*CRQDSA
Trigger: TGCGGAGTCCTGACGGCACCAGTAAAGGCTGTGCCT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGGGCTGGCCATTGGTCTaGGGGGTCAGAGGGCCGAAT +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGGWPLV*GVRGPN
Trigger: ATTCGGCCCTCTGACCCCCCAGACCAATGGCCAGCC...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp ACAGACAGACAAAGACAGACAGACAGAGCACACACCACTTCTAAGCTCAACACTGGGGGCCTCCCGGGATaGCAAAGGCCAGGGCCAACC +
Preference number: 4 (lower is better)
Translates to: TDRQRQTDRAHTTSKLNTGGLPG*QRPGPT
Trigger: GGTTGGCCCTGGCCTTTGCCATCCCGGGAGGCCCCC...AGTGTTGAGCTTAGAAGTGGTGTGTGCTCTGTCTGTCTGTCTTTGTCTGTCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCTCTGTCTACCTGGATTaGCAAGGGAAAGGCTCAGGT +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACSVYLD*QGKGSG
Trigger: ACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGA...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCAAGAGCTGGGTGCGTaGGAGGTGAGGAATTATTGT +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICQELGA*EVRNYC
Trigger: ACAATAATTCCTCACCTCCCACGCACCCAGCTCTTG...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR TCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCTGTGGCTGGTCAGTaGAAGCAGGTCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSVAGQ*KQVSKA
Trigger: GGCCTTACTGACCTGCTTTCACTGACCAGCCACAGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR TCA 90 bp GAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCTTCTGGGATGCACTCTaGGTTTGGGGATTGTGGATT +
Preference number: 4 (lower is better)
Translates to: EVNLGFPCGEALGTPNALFWDAL*VWGLWI
Trigger: AATCCACAATCCCCAAACTCAGAGTGCATCCCAGAA...GAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTGGGGCTGTAGGCCCAGGAAAGGCTaGCCAAGGCAAGGTGAGTCA +
Preference number: 4 (lower is better)
Translates to: NETQNNLSTAPICLGWGCRPRKG*PRQGES
Trigger: TGACTCACCTTGCCTTGGTCAGCCTTTCCTGGGCCT...ACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCAAACCCAAAACACTTaGTCTGGTTGGTGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICQTQNT*SGWWLD
Trigger: ATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTG...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCCAAACCCAAAACACTTaGTCTGGTTGGTGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACQTQNT*SGWWLD
Trigger: ATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTG...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CACATCTTTTACTATCTGACATGTTATCAGATCAGAGGCCTTCAGCCTCAGCAATCCCGCCGGTCCCACTaGTCCCGCCTGTCCCGCCGT +
Preference number: 4 (lower is better)
Translates to: HIFYYLTCYQIRGLQPQQSRRSH*SRLSRR
Trigger: ACGGCGGGACAGGCGGGACCAGTGGGACCGGCGGGA...TTGCTGAGGCTGAAGGCCTCTGATCTGATAACATGTCAGATAGTAAAAGATGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp TGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCTCTTTCTCGGACGATTCATCCCTaGCAGGGTCTTCTGCTCGTG +
Preference number: 4 (lower is better)
Translates to: CLPGLARERLRWPELPLSRTIHP*QGLLLV
Trigger: CACGAGCAGAAGACCCTGCCAGGGATGAATCGTCCG...AGAAAGAGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp GGGTGGAGGGGAAATCCTCCTGGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGCAGCTGGCTTCACTTaGATCGGACGATTCATCCCT +
Preference number: 4 (lower is better)
Translates to: GWRGNPPGKNMCKALQAQAAGFT*IGRFIP
Trigger: AGGGATGAATCGTCCGATCCAAGTGAAGCCAGCTGC...CTGGGCCTGTAGGGCCTTGCACATATTTTTCCCAGGAGGATTTCCCCTCCACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGTCAGTAAGGCCGGTTaGCATCCTTGGGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLVSKAG*HPWAAL
Trigger: TAAAGCGGCCCAAGGATGCCAACCGGCCTTACTGAC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp TGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCTCTTTCTGCTGATCCATGCCTGTaGGGTGGAGGGGAAATCCTC +
Preference number: 4 (lower is better)
Translates to: CLPGLARERLRWPELPLSADPCL*GGGEIL
Trigger: GAGGATTTCCCCTCCACCCCACAGGCATGGATCAGC...AGAAAGAGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCTCTCATGGGTGTTGTaGGGATCACATGAGGTAATG +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFLSWVL*GSHEVM
Trigger: CATTACCTCATGTGATCCCCACAACACCCATGAGAG...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR TCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCACTTTGTGGAGGCCGGTaGGCCGGTCCTTCAGCACCG +
Preference number: 4 (lower is better)
Translates to: SLLSQPSTDILNLLYRWALCGGR*AGPSAP
Trigger: CGGTGCTGAAGGACCGGCTCACCGGCCTCCACAAAG...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCAAACCCAAAACACTTaGTCTGGTTGGTGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASQTQNT*SGWWLD
Trigger: ATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACCAGCCCTATTTGCTCTaGCAGCCTGCGCTCTATGCT +
Preference number: 4 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNQPYLL*QPALYA
Trigger: AGCATAGAGCGCAGGCTGGCAGAGCAAATAGGGCTG...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTAGGCAATCCCACTCTTaGTGGCTAGGGGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: CGFTASITFSLPACEPRPRQSHS*WLGGLP
Trigger: CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCAGCTGGCTTCACTTaGATCGGACGATTCATCCCT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLAAGFT*IGRFIP
Trigger: AGGGATGAATCGTCCGATCCAAGTGAAGCCAGCTGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGATGTGGCCAAAGGGCTaGAACAGGCGTCTGACGTCC +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGMWPKG*NRRLTS
Trigger: GGACGTCAGACGCCTGTTCCAGCCCTTTGGCCACAT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAAGGCACAGCCTTTACTaGTGCCGTCAGGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQRHSLY*CRQDSA
Trigger: TGCGGAGTCCTGACGGCACCAGTAAAGGCTGTGCCT...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AATGAGACACAGAACAATCTTTCCACAGCCCCCATCTGCCTAGGCTGGGGCTGTGTCAGTAAGGCCGGTTaGCATCCTTGGGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: NETQNNLSTAPICLGWGCVSKAG*HPWAAL
Trigger: TAAAGCGGCCCAAGGATGCCAACCGGCCTTACTGAC...ACAGCCCCAGCCTAGGCAGATGGGGGCTGTGGAAAGATTGTTCTGTGTCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCTTCATCTTCCTCTCATaGGTGTTGTGGGGATCACAT +
Preference number: 4 (lower is better)
Translates to: LVPLDSHSSPALFALPACFIFLS*VLWGSH
Trigger: ATGTGATCCCCACAACACCCATGAGAGGAAGATGAA...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTTCATCTTCCTCTCATaGGTGTTGTGGGGATCACAT +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFFIFLS*VLWGSH
Trigger: ATGTGATCCCCACAACACCCATGAGAGGAAGATGAA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
3UTR CAA 72 bp CTCTGCCTGGGGCCTCTTCTGGGATGCACTCTGAGTTaGGGGATTGTGGATTGTGGGTTCACTGCTTCCATA +
Preference number: 4 (lower is better)
Translates to: LCLGPLLGCTLS*GIVDCGFTASI
Trigger: TATGGAAGCAGTGAACCCACAATCCACAATCCCCAAACTCAGAGTGCATCCCAGAAGAGGCCCCAGGCAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp GTGGATTGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTTCCTCCTCACCCTGCTaGTTGCCCAGCATCCCCACA +
Preference number: 4 (lower is better)
Translates to: VDCGFTASITFSLPACEPSSSPC*LPSIPT
Trigger: TGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGA...AGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACAATCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTGGGCCTTCTCTCTGCTaGTGGGGCAGGGCTGAAGGC +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESGPSLC*WGRAEG
Trigger: GCCTTCAGCCCTGCCCCAGCAGCAGAGAGAAGGCCC...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp GTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGCTCTGGACCTCCGTCCGCAGCTaGTCCTTCGGGAAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: VWALVGLSKLTNPKHLLWTSVRS*SFGKGC
Trigger: GCAGCCCTTCCCGAAGGAGCAGCTGCGGACGGAGGT...CCAGAGCAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR GCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGGATTGTGGGTTCACTaGTTCCATAACGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFGLWVH*FHNVLI
Trigger: AATGAGAACGTTATGGAAGCAGTGAACCCACAATCC...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAGGCAATCCCACTCTTaGTGGCTAGGGGGCCTCCCG +
Preference number: 4 (lower is better)
Translates to: SLLSQPSTDILNLLYRWARQSHS*WLGGLP
Trigger: CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACTGCCAAGAGCTGGGTaGGTGGGAGGTGAGGAATTA +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQLPRAG*VGGEEL
Trigger: TAATTCCTCACCTCCCACGCACCCAGCTCTTGGCAG...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTGCCGGGGCTCTGGGCTaGATAAGGGGAGAGCCCGTT +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESAGALG*IRGEPV
Trigger: AACGGGCTCTCCCCTTATCCAGCCCAGAGCCCCGGC...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAAGGGCTGAAGGCTGCTaGGGAAAAGCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQRAEGC*GKAVLT
Trigger: AGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCT...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAGTCAGTAAGGCCGGTTaGCATCCTTGGGCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQVSKAG*HPWAAL
Trigger: TAAAGCGGCCCAAGGATGCCAACCGGCCTTACTGAC...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGAGGGGACACTGGGACTaGTTCAAGGGGAAGGGAAAC +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGRGHWD*FKGKGN
Trigger: GTTTCCCTTCCCCTTGAACCAGTCCCAGTGTCCCCT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAAGCCTCAGCAACATCTaGGGATTAGAGGGACCCCAC +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQSLSNI*GLEGPH
Trigger: GTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCT...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR TCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGCAGGAATGTCTGTATaGGTTCCGCATCACCAAACT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLAGMSV*VPHHQT
Trigger: AGTTTGGTGATGCGGAACTCATACAGACATTCCTGC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR TCA 90 bp AGATCAGAGGCCTTCAGCCTCAGCAACATCTGGGGATTAGAGGGACCCCACACAAGGAAGCACCACCATTaGTCAGCTTTATATGGCACC +
Preference number: 4 (lower is better)
Translates to: RSEAFSLSNIWGLEGPHTRKHHH*SALYGT
Trigger: GGTGCCATATAAAGCTGATCAATGGTGGTGCTTCCT...TGTGTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCTGAAGGCCTCTGATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAAACGTCCTCCTCACCCTaGTGCTTGCCCAGCATCCCC +
Preference number: 4 (lower is better)
Translates to: SVVTALYRYPESTLQVGKTSSSP*CLPSIP
Trigger: GGGGATGCTGGGCAAGCAGCAGGGTGAGGAGGACGT...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTAGGTGGCCGGCCATCTaGTGCATCCGCCGCAGCGCG +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVRWPAI*CIRRSA
Trigger: CGCGCTGCGGCGGATGCAGCAGATGGCCGGCCACCT...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCAAACCCAAAACACTTaGTCTGGTTGGTGGCTCGAT +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLQTQNT*SGWWLD
Trigger: ATCGAGCCACCAACCAGAGCAAGTGTTTTGGGTTTG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR GCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGCCTGGGAAAAATATGTaGAAGGCCCTACAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGPGKNM*KALQAQ
Trigger: CTGGGCCTGTAGGGCCTTGCACATATTTTTCCCAGG...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAAAAAGCTGTGCTCACTaGGGCATAGGCCGACGGATA +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQKSCAH*GIGRRI
Trigger: TATCCGTCGGCCTATGCCCCAGTGAGCACAGCTTTT...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAACCTGGCAGGGTCTTCTaGTCGTGCAGTGCACTCTGG +
Preference number: 4 (lower is better)
Translates to: SVVTALYRYPESTLQVGKPGRVF*SCSALW
Trigger: CCAGAGTGCACTGCACGAGCAGAAGACCCTGCCAGG...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp ACAGACAGACAAAGACAGACAGACAGAGCACACACCACTTCTAAGCTCAACACTGACCAAGCTGATCCATaGCTGTGGGGTGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TDRQRQTDRAHTTSKLNTDQADP*LWGGGE
Trigger: TTCCCCTCCACCCCACAGGCATGGATCAGCTTGGTC...AGTGTTGAGCTTAGAAGTGGTGTGTGCTCTGTCTGTCTGTCTTTGTCTGTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACG +
Preference number: 4 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLALTGS*LHLDRT
Trigger: CGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGC...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTAGGGCTGAAGGCTGCTaGGGAAAAGCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: CGFTASITFSLPACEPRPRAEGC*GKAVLT
Trigger: AGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCT...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCAGTCTGGGCACTAGTTaGATTGTCAAAACTAACAAA +
Preference number: 4 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICSLGTS*IVKTNK
Trigger: TTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACT...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTAGTCTGGGCACTAGTTaGATTGTCAAAACTAACAAA +
Preference number: 4 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFSLGTS*IVKTNK
Trigger: TTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACT...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTCCCAACGCCCTCTGCTaGTTCCCCTGGACAGTCACT +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESPNALC*FPWTVT
Trigger: AGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGG...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp GAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCAAAGCAATAGTCCTTTaGTCCCTAAACTCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: EVNLGFPCGEALGTPNALKAIVL*SLNSKE
Trigger: TTCCTTAGAGTTTAGGGACCAAAGGACTATTGCTTT...GAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp GTGGATTGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTCTCTTTCTTCCCGCCTaGGGAAGCAGTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: VDCGFTASITFSLPACEPLFLPA*GSSGST
Trigger: TGTGGAACCACTGCTTCCCCAGGCGGGAAGAAAGAG...AGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACAATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTCTTCCCTCCCAGGTCTaGGGTAAAGAGGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: CGFTASITFSLPACEPRPLPSQV*GKEGPL
Trigger: TAGAGGTCCCTCTTTACCCCAGACCTGGGAGGGAAG...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACAAGAGCTGGGTGCGTaGGAGGTGAGGAATTATTGT +
Preference number: 4 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQQELGA*EVRNYC
Trigger: ACAATAATTCCTCACCTCCCACGCACCCAGCTCTTG...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
3UTR CAA 72 bp GCCTGCGCTCTATGCTGCAGGCACAGAACAACCCACTaGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCA +
Preference number: 4 (lower is better)
Translates to: ACALCCRHRTTH*IKTILRVALAP
Trigger: TGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTGGGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR TCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAACGCTGGGGTCTGGCTTaGGGTCCCCGTGCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKRWGLA*GPRAAL
Trigger: GAGAGCCGCACGGGGACCTCAAGCCAGACCCCAGCG...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTAATCTGGGCTTCCCTTaGGGAGAAGCCCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESNLGFP*GEALGT
Trigger: GGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATT...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAAAGGCACAGCCTTTACTaGTGCCGTCAGGACTCCGCA +
Preference number: 4 (lower is better)
Translates to: SVVTALYRYPESTLQVGKRHSLY*CRQDSA
Trigger: TGCGGAGTCCTGACGGCACCAGTAAAGGCTGTGCCT...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAAGCCAGCAGGGCCGCCTaGTGCTGCAGGATCGCCGTG +
Preference number: 4 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKASRAA*CCRIAV
Trigger: CACGGCGATCCTGCAGCACCAGGCGGCCCTGCTGGC...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAAAAGCAATAGTCCTTTaGTCCCTAAACTCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: PLLVPLDSHSSPALFALPKAIVL*SLNSKE
Trigger: TTCCTTAGAGTTTAGGGACCAAAGGACTATTGCTTT...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCAAAGCAATAGTCCTTTaGTCCCTAAACTCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SAGSPGQSLLTSPICSASKAIVL*SLNSKE
Trigger: TTCCTTAGAGTTTAGGGACCAAAGGACTATTGCTTT...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR GCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAAAGCAGGGCCGCCTGGTaGTGCAGGATCGCCGTGGTG +
Preference number: 4 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKSRAAW*CRIAVV
Trigger: CACCACGGCGATCCTGCAGCACCAGGCGGCCCTGCT...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTCAATCCCACTCTTGCTaGCTAGGGGGCCTCCCGGGA +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVQSHSC*LGGLPG
Trigger: TCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTG...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTAGACAGAAGGTAGCCTaGAGCAAGGGGACACTGGGA +
Preference number: 4 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLRQKVA*SKGTLG
Trigger: TCCCAGTGTCCCCTTGCTCCAGGCTACCTTCTGTCT...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTCTTCCCTCCCAGGTCTaGGGTAAAGAGGGACCTCTA +
Preference number: 4 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLLPSQV*GKEGPL
Trigger: TAGAGGTCCCTCTTTACCCCAGACCTGGGAGGGAAG...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
3UTR CAA 72 bp TGCCCATCTCACAGAAGCAGGCAGGAAGCACCACCATaGATCAGCTTTATATGGCACCCACTGTATACAACA +
Preference number: 4 (lower is better)
Translates to: CPSHRSRQEAPP*ISFIWHPLYTT
Trigger: TGTTGTATACAGTGGGTGCCATATAAAGCTGATCAATGGTGGTGCTTCCTGCCTGCTTCTGTGAGATGGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTAAAAGCTGTGCTCACTaGGGCATAGGCCGACGGATA +
Preference number: 4 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLKSCAH*GIGRRI
Trigger: TATCCGTCGGCCTATGCCCCAGTGAGCACAGCTTTT...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGTCTGGGCACTAGTTaGATTGTCAAAACTAACAAA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSLGTS*IVKTNK
Trigger: TTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CCA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAAAGCAATAGTCCTTTaGTCCCTAAACTCTAAGGAA +
Preference number: 4 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLKAIVL*SLNSKE
Trigger: TTCCTTAGAGTTTAGGGACCAAAGGACTATTGCTTT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp TGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTAGACCTGGGGATTGTGGATTGTaGGTTCACTGCTTCCATAAC +
Preference number: 4 (lower is better)
Translates to: CGFTASITFSLPACEPRPGDCGL*VHCFHN
Trigger: GTTATGGAAGCAGTGAACCCACAATCCACAATCCCC...AGGTCTAGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp AGATCAGAGGCCTTCAGCCTCAGCAACATCTGGGGATTAGAGGGACCCCACACATTGATCAGCTTTATATaGCACCCACTGTATACAACA +
Preference number: 4 (lower is better)
Translates to: RSEAFSLSNIWGLEGPHTLISFI*HPLYTT
Trigger: TGTTGTATACAGTGGGTGCCATATAAAGCTGATCAA...TGTGTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCTGAAGGCCTCTGATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGAGGCAAGGTGAGTCATaGTGTTCTAAGCTGAATCTT +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGRQGES*CSKLNL
Trigger: AAGATTCAGCTTAGAACACCATGACTCACCTTGCCT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR TCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAAGGCCTCAGACCAAGCTaGTCCATGCCTGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKGLRPS*SMPVGW
Trigger: CCACCCCACAGGCATGGATCAGCTTGGTCTGAGGCC...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR GCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTCACAGCCTTTACTGGTaGCGTCAGGACTCCGCAGGA +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVHSLYW*RQDSAG
Trigger: TCCTGCGGAGTCCTGACGGCACCAGTAAAGGCTGTG...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTCCAGCCTGCGCTCTATaGTGCAGGCACAGAACAACC +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVPACAL*CRHRTT
Trigger: GGTTGTTCTGTGCCTGCAGCATAGAGCGCAGGCTGG...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp GCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTGCAGGAATGTCTGTATaGGTTCCGCATCACCAAACT +
Preference number: 4 (lower is better)
Translates to: ANLPSLLSQPSTDILNLLAGMSV*VPHHQT
Trigger: AGTTTGGTGATGCGGAACTCATACAGACATTCCTGC...AAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTAGGGCTGAAGGCTGCTaGGGAAAAGCTGTGCTCACT +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVRAEGC*GKAVLT
Trigger: AGTGAGCACAGCTTTTCCCCAGCAGCCTTCAGCCCT...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CCA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGAGTCTGGGCACTAGTTaGATTGTCAAAACTAACAAA +
Preference number: 4 (lower is better)
Translates to: HLIKTILRVALAPGTSLGSLGTS*IVKTNK
Trigger: TTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTGGGGATTGTGGATTGTaGGTTCACTGCTTCCATAAC +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESGDCGL*VHCFHN
Trigger: GTTATGGAAGCAGTGAACCCACAATCCACAATCCCC...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp AGTAGCAAACCTTCCAAGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTCCTCTACAGATATCCTaGATCTACTTTACAGGTGGG +
Preference number: 4 (lower is better)
Translates to: SSKPSKSVVTALYRYPESPLQIS*IYFTGG
Trigger: CCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGG...AGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACTTGGAAGGTTTGCTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAACATGGTGTTCTAAGCTaGATCTTTTGCCCATCTCAC +
Preference number: 4 (lower is better)
Translates to: SVVTALYRYPESTLQVGKHGVLS*IFCPSH
Trigger: GTGAGATGGGCAAAAGATTCAGCTTAGAACACCATG...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTAAAAGCTGTGCTCACTaGGGCATAGGCCGACGGATA +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVKSCAH*GIGRRI
Trigger: TATCCGTCGGCCTATGCCCCAGTGAGCACAGCTTTT...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp CGTTCTCATTACCTGCATGTGAGCCTAGACCTCAAATCCTTAATTATTTTTAAATCTGTGGCTGGTCAGTaGAAGCAGGTCAGTAAGGCC +
Preference number: 4 (lower is better)
Translates to: RSHYLHVSLDLKSLIIFKSVAGQ*KQVSKA
Trigger: GGCCTTACTGACCTGCTTTCACTGACCAGCCACAGA...TTTAAAAATAATTAAGGATTTGAGGTCTAGGCTCACATGCAGGTAATGAGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR TCA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTGCAGGAATGTCTGTATaGGTTCCGCATCACCAAACT +
Preference number: 4 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVAGMSV*VPHHQT
Trigger: AGTTTGGTGATGCGGAACTCATACAGACATTCCTGC...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR GCA 90 bp CACATCTTTTACTATCTGACATGTTATCAGATCAGAGGCCTTCAGCCTCAGCAAGGATTGTGGGTTCACTaGTTCCATAACGTTCTCATT +
Preference number: 4 (lower is better)
Translates to: HIFYYLTCYQIRGLQPQQGLWVH*FHNVLI
Trigger: AATGAGAACGTTATGGAAGCAGTGAACCCACAATCC...TTGCTGAGGCTGAAGGCCTCTGATCTGATAACATGTCAGATAGTAAAAGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS CCA 90 bp GCCGCGGCCATGTCCCCGCCCTGTCAGCCCTCCCGCCGGTCCCACTaGTCCCGCCTGTCCCGCCGTCCCCTCCCTGGACCGGTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: AAAMSPPCQPSRRSH*SRLSRRPLPGPVAR
Trigger: CCTCGCCACCGGTCCAGGGAGGGGACGGCGGGACAGGCGGGACCAGTGGGACCGGCGGGAGGGCTGACAGGGCGGGGACATGGCCGCGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CAA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCAGAGGGCCGAATCCATaGACCCCGATGGGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPRGPNP*TPMGAG
Trigger: TCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTCT...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp GCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGTCCTCACCCTGCTGCTaGCCCAGCATCCCCACAAAC +
Preference number: 5 (lower is better)
Translates to: APGTSLGSDPPPSAAAPSSSPCC*PSIPTN
Trigger: GTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGA...CGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCTGCCAGGCGGGGAGTaGGCTGCTGCCGCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFLPGGE*AAAAGN
Trigger: GTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCAG...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
CDS-3UTR CAA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCAAGGCAATCCCACTCTaGCTGGCTAGGGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFKAIPL*LARGPP
Trigger: GGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGTCGGTGTCCGCCAGCTaGACCACGAGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPSVSAS*TTRLDE
Trigger: CTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 5 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp AGCCCCAGGCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCAAATCTGGGCTTCCCTaGCGGAGAAGCCCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: SPRHQPWVRSTSVRSCSFKSGLP*RRSPWH
Trigger: GTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTT...GAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCCAGGCGGGGAGTaGGCTGCCGCGGGCAACAGA +
Preference number: 5 (lower is better)
Translates to: SAGSPGQSLLTSPICSASLPGGE*AAAGNR
Trigger: TCTGTTGCCCGCGGCAGCCAACTCCCCGCCTGGCAG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS-3UTR CAA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGGAAGGCACAGCCTTaGTGGAGGCCGGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVARKAQP*WRPVSR
Trigger: CCGGCTCACCGGCCTCCACAAAGGCTGTGCCTTCCT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp GAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACGCCCTCTCGGTGTCCGCCAGCTaGACCACGAGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: EVNLGFPCGEALGTPNALSVSAS*TTRLDE
Trigger: CTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA...GAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTCGGTGTCCGCCAGCTaGACCACGAGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFSVSAS*TTRLDE
Trigger: CTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCTGCCAGGCGGGGAGTaGGCTGCTGCCGCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLLPGGE*AAAAGN
Trigger: GTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCAG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CAA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTCTTGCGGAGAAGCCCTaGGCACCCCCAACGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFLAEKP*APPTPS
Trigger: AGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAG...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp AGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGGGATGGCAAAGGCCAGGGAAATCTGGGCTTCCCTaGCGGAGAAGCCCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: RQSHSCWLGGLPGWQRPGKSGLP*RRSPWH
Trigger: GTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTT...CCCTGGCCTTTGCCATCCCGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp TGGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCAAATCTGGGCTTCCCTaGCGGAGAAGCCCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: WHPQRPLLVPLDSHSSPAKSGLP*RRSPWH
Trigger: GTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTT...GGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp GCAGTGGTTCCACAGGAAAGGCAATCCCACTCTTGCTGGCTAGGGGGCCTCCCGTCCTCGAACAGCGGCTaGAGGTCCTGCTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: AVVPQERQSHSCWLGGLPSSNSG*RSCSSK
Trigger: CTTGGACGAGCAGGACCTCAAGCCGCTGTTCGAGGA...CGGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTTTCCTGTGGAACCACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAAGAGGGCCGAATCCATaGACCCCGATGGGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: PLLVPLDSHSSPALFALPRGPNP*TPMGAG
Trigger: TCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTCT...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCACTTGCGGAGAAGCCCTaGGCACCCCCAACGCCCTCT +
Preference number: 5 (lower is better)
Translates to: PLLVPLDSHSSPALFALPLAEKP*APPTPS
Trigger: AGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAG...TGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCCTTGCGGAGAAGCCCTaGGCACCCCCAACGCCCTCT +
Preference number: 5 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLLAEKP*APPTPS
Trigger: AGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAG...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp GCACCAGCCTTGGGTCCGATCCACCTCCGTCCGCAGCTGCTCCTTCGGGAAGGGGGATGCACTCTGAGTTaGGGGATTGTGGATTGTGGG +
Preference number: 5 (lower is better)
Translates to: APALGPIHLRPQLLLREGGCTLS*GIVDCG
Trigger: CCCACAATCCACAATCCCCAAACTCAGAGTGCATCC...CCCTTCCCGAAGGAGCAGCTGCGGACGGAGGTGGATCGGACCCAAGGCTGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp GGCACCCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCGGCAGCTGGCTTCACTaGGATCGGACGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: GTPNALCWFPWTVTPHQPGSWLH*DRTIHL
Trigger: AAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCC...GGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCTGCTCCTCACCCTGCTGCTaGCCCAGCATCCCCACAAAC +
Preference number: 5 (lower is better)
Translates to: LVPLDSHSSPALFALPACSSPCC*PSIPTN
Trigger: GTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGA...GCAGGCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGTGCACTCTGGGCCTaGAGAGCAGAGTCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSALWA*RAESRA
Trigger: CGCCCGGGACTCTGCTCTCAAGGCCCAGAGTGCACT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCGGTGTCCGCCAGCTaGACCACGAGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSVSAS*TTRLDE
Trigger: CTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTAGAGGGCCGAATCCATaGACCCCGATGGGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRGPNP*TPMGAG
Trigger: TCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTCT...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CAA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 5 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCTTGCGGAGAAGCCCTaGGCACCCCCAACGCCCTCT +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLLAEKP*APPTPS
Trigger: AGAGGGCGTTGGGGGTGCCAAGGGCTTCTCCGCAAG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CCAAAGGCAGGGCCTCTGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAAATCTGGGCTTCCCTaGCGGAGAAGCCCTTGGCAC +
Preference number: 5 (lower is better)
Translates to: PKAGPLSTWIGKGKAQVAKSGLP*RRSPWH
Trigger: GTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTT...GGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAGGCCCTGCCTTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACAGGAAGGCACAGCCTTaGTGGAGGCCGGTGAGCCGG +
Preference number: 5 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNRKAQP*WRPVSR
Trigger: CCGGCTCACCGGCCTCCACAAAGGCTGTGCCTTCCT...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp CCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCCGCCTGAGCTTCCCCTaGACTCCCGAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: PTPSAGSPGQSLLTSPICRLSFP*TPELHK
Trigger: TTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCG...GCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp AGATCAGAGGCCTTCAGCCTCAGCAACATCTGGGGATTAGAGGGACCCCACACAAAGGCAATCCCACTCTaGCTGGCTAGGGGGCCTCCC +
Preference number: 5 (lower is better)
Translates to: RSEAFSLSNIWGLEGPHTKAIPL*LARGPP
Trigger: GGGAGGCCCCCTAGCCAGCAAGAGTGGGATTGCCTT...TGTGTGGGGTCCCTCTAATCCCCAGATGTTGCTGAGGCTGAAGGCCTCTGATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS CCA 90 bp CCTGTTCAGGAGCCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTTaGATCGGACGATTCATCTTCCTCTCATGGGTGTTGTGGGGATCA +
Preference number: 5 (lower is better)
Translates to: PVQEPPRPSLAAGFT*IGRFIFLSWVLWGS
Trigger: TGATCCCCACAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGGCTCCTGAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395258.7
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCCTCGAACAGCGGCTaGAGGTCCTGCTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSSNSG*RSCSSK
Trigger: CTTGGACGAGCAGGACCTCAAGCCGCTGTTCGAGGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000287202.10
ENST00000437872.7
ENST00000567083.2
CDS-3UTR CAA 90 bp GGGTGGAGGGGAAATCCTCCTGGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGGCAGCTGGCTTCACTaGGATCGGACGATTCATCCC +
Preference number: 5 (lower is better)
Translates to: GWRGNPPGKNMCKALQAQGSWLH*DRTIHP
Trigger: GGGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCC...CTGGGCCTGTAGGGCCTTGCACATATTTTTCCCAGGAGGATTTCCCCTCCACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTCCTCACCCTGCTGCTaGCCCAGCATCCCCACAAAC +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLSSPCC*PSIPTN
Trigger: GTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CAA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCCGCCTGAGCTTCCCCTaGACTCCCGAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: SAGSPGQSLLTSPICSASRLSFP*TPELHK
Trigger: TTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCG...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCACTGCCAGGCGGGGAGTaGGCTGCTGCCGCGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SLLSQPSTDILNLLYRWALPGGE*AAAAGN
Trigger: GTTGCCCGCGGCAGCAGCCAACTCCCCGCCTGGCAG...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGAGAGGGCCGAATCCATaGACCCCGATGGGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: HLIKTILRVALAPGTSLGRGPNP*TPMGAG
Trigger: TCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTCT...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCTT +
Preference number: 5 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFGSWLH*DRTIHL
Trigger: AAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCC...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS CCA 90 bp AGCTTTCGGTCCTCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTTaGATCGGACGATTCATCTTCCTCTCATGGGTGTTGTGGGGATCA +
Preference number: 5 (lower is better)
Translates to: SFRSSPRPSLAAGFT*IGRFIFLSWVLWGS
Trigger: TGATCCCCACAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCCC +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLGSWLH*DRTIHP
Trigger: GGGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCC...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS-3UTR CAA 90 bp CCCCAACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTTTCCTCTCATGGGTGTaGTGGGGATCACATGAGGTA +
Preference number: 5 (lower is better)
Translates to: PQRPLLVPLDSHSSPALFFLSWV*WGSHEV
Trigger: TACCTCATGTGATCCCCACAACACCCATGAGAGGAA...AAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTTGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTCGCCTGAGCTTCCCCTaGACTCCCGAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLRLSFP*TPELHK
Trigger: TTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCG...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS-3UTR CAA 90 bp ACAGACAGACAAAGACAGACAGACAGAGCACACACCACTTCTAAGCTCAACACTCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 5 (lower is better)
Translates to: TDRQRQTDRAHTTSKLNTPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...AGTGTTGAGCTTAGAAGTGGTGTGTGCTCTGTCTGTCTGTCTTTGTCTGTCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CAA 90 bp ACAGACAGACAAAGACAGACAGACAGAGCACACACCACTTCTAAGCTCAACACTAGTGCACTCTGGGCCTaGAGAGCAGAGTCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: TDRQRQTDRAHTTSKLNTSALWA*RAESRA
Trigger: CGCCCGGGACTCTGCTCTCAAGGCCCAGAGTGCACT...AGTGTTGAGCTTAGAAGTGGTGTGTGCTCTGTCTGTCTGTCTTTGTCTGTCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CAA 90 bp AACGCCCTCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTTTGGGGATTGTGGATaGTGGGTTCACTGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: NALCWFPWTVTPHQPYLLFGDCG*WVHCFH
Trigger: ATGGAAGCAGTGAACCCACAATCCACAATCCCCAAA...GAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGAGGGCGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCTTTGGGGATTGTGGATaGTGGGTTCACTGCTTCCAT +
Preference number: 5 (lower is better)
Translates to: SAGSPGQSLLTSPICSASFGDCG*WVHCFH
Trigger: ATGGAAGCAGTGAACCCACAATCCACAATCCCCAAA...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp TTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAACCTCTGTCTACCTGGATaGGCAAGGGAAAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: LKEVNLGFPCGEALGTPNLCLPG*ARERLR
Trigger: CCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAG...GTTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp GTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGCTCTGGAGTGCACTCTGGGCCTaGAGAGCAGAGTCCCGGGCG +
Preference number: 5 (lower is better)
Translates to: VWALVGLSKLTNPKHLLWSALWA*RAESRA
Trigger: CGCCCGGGACTCTGCTCTCAAGGCCCAGAGTGCACT...CCAGAGCAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR CAA 90 bp CACTTGATAAAAACAATCCTTAGAGTGGCCTTAGCCCCAGGCACCAGCCTTGGGCGCCTGAGCTTCCCCTaGACTCCCGAACTTCACAAA +
Preference number: 5 (lower is better)
Translates to: HLIKTILRVALAPGTSLGRLSFP*TPELHK
Trigger: TTTGTGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCG...CCCAAGGCTGGTGCCTGGGGCTAAGGCCACTCTAAGGATTGTTTTTATCAAGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAATCGGTGTCCGCCAGCTaGACCACGAGGCTGGACGAG +
Preference number: 5 (lower is better)
Translates to: SVVTALYRYPESTLQVGKSVSAS*TTRLDE
Trigger: CTCGTCCAGCCTCGTGGTCAAGCTGGCGGACACCGA...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp TCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCAAAAGAGGGCCGAATCCATaGACCCCGATGGGCGCCGGA +
Preference number: 5 (lower is better)
Translates to: SVVTALYRYPESTLQVGKRGPNP*TPMGAG
Trigger: TCCGGCGCCCATCGGGGTCAATGGATTCGGCCCTCT...TTTGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTTCCTCTCATGGGTGTaGTGGGGATCACATGAGGTA +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLFLSWV*WGSHEV
Trigger: TACCTCATGTGATCCCCACAACACCCATGAGAGGAA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CAA 90 bp TCTGCTGGTTCCCCTGGACAGTCACTCCTCACCAGCCCTATTTGCTCTGCCAGCTGGGCACTAGTTGGATaGTCAAAACTAACAAACCCA +
Preference number: 5 (lower is better)
Translates to: SAGSPGQSLLTSPICSASWALVG*SKLTNP
Trigger: TGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCA...GCTGGCAGAGCAAATAGGGCTGGTGAGGAGTGACTGTCCAGGGGAACCAGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
CDS-3UTR CAA 90 bp ATAGCAGTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGCCCCAGGCACCAGCCTaGGGTCCGATCCACCTCCGT +
Preference number: 5 (lower is better)
Translates to: IAVWALVGLSKLTNPKHLPQAPA*GPIHLR
Trigger: ACGGAGGTGGATCGGACCCAAGGCTGGTGCCTGGGG...CAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACTGCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR CAA 90 bp GTGGATTGTGGGTTCACTGCTTCCATAACGTTCTCATTACCTGCATGTGAGCCTCTCTGTCTACCTGGATaGGCAAGGGAAAGGCTCAGG +
Preference number: 5 (lower is better)
Translates to: VDCGFTASITFSLPACEPLCLPG*ARERLR
Trigger: CCTGAGCCTTTCCCTTGCCAATCCAGGTAGACAGAG...AGGCTCACATGCAGGTAATGAGAACGTTATGGAAGCAGTGAACCCACAATCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp GGGAAAAATATGTGCAAGGCCCTACAGGCCCAGGAAAGGCTGACCAAGGCAAGGTGGGCACTAGTTGGATaGTCAAAACTAACAAACCCA +
Preference number: 5 (lower is better)
Translates to: GKNMCKALQAQERLTKARWALVG*SKLTNP
Trigger: TGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCA...CCTTGCCTTGGTCAGCCTTTCCTGGGCCTGTAGGGCCTTGCACATATTTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CAA 90 bp CAGCTGCTCCTTCGGGAAGGGCTGCTCAAGCGTTTCTGTGCTTTTCCTCTCCTTTGGGCACTAGTTGGATaGTCAAAACTAACAAACCCA +
Preference number: 5 (lower is better)
Translates to: QLLLREGLLKRFCAFPLLWALVG*SKLTNP
Trigger: TGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCA...AAGGAGAGGAAAAGCACAGAAACGCTTGAGCAGCCCTTCCCGAAGGAGCAGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS CCA 90 bp GGCTTCACTTGGATCGGACGATTCATCTTCCTCTCATGGGTGTTGTaGGGATCACATGAGGTAATGGGGACGCAAAAGGTCTTTGTAAAC +
Preference number: 5 (lower is better)
Translates to: GFTWIGRFIFLSWVL*GSHEVMGTQKVFVN
Trigger: GTTTACAAAGACCTTTTGCGTCCCCATTACCTCATGTGATCCCCACAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS-3UTR CAA 90 bp ATAGCAGTCTGGGCACTAGTTGGATTGTCAAAACTAACAAACCCAAAACACTTGTCCTCGAACAGCGGCTaGAGGTCCTGCTCGTCCAAG +
Preference number: 5 (lower is better)
Translates to: IAVWALVGLSKLTNPKHLSSNSG*RSCSSK
Trigger: CTTGGACGAGCAGGACCTCAAGCCGCTGTTCGAGGA...CAAGTGTTTTGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCAGACTGCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000437872.7
CDS-3UTR CAA 90 bp TGTCTACCTGGATTGGCAAGGGAAAGGCTCAGGTGGCCAGAACTCCCTCTTTCTTGGGCACTAGTTGGATaGTCAAAACTAACAAACCCA +
Preference number: 5 (lower is better)
Translates to: CLPGLARERLRWPELPLSWALVG*SKLTNP
Trigger: TGGGTTTGTTAGTTTTGACAATCCAACTAGTGCCCA...AGAAAGAGGGAGTTCTGGCCACCTGAGCCTTTCCCTTGCCAATCCAGGTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp AAATTTCCCCTTCTCAATGGCAGTATATACAGTAGCAAACCTTCCAAGTCTGTTTCCTCACCCTGCTGCTaGCCCAGCATCCCCACAAAC +
Preference number: 5 (lower is better)
Translates to: KFPLLNGSIYSSKPSKSVSSPCC*PSIPTN
Trigger: GTTTGTGGGGATGCTGGGCAAGCAGCAGGGTGAGGA...AACAGACTTGGAAGGTTTGCTACTGTATATACTGCCATTGAGAAGGGGAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000437872.7
CDS-3UTR CAA 90 bp TTTGAAAGAAGTAAATCTGGGCTTCCCTTGCGGAGAAGCCCTTGGCACCCCCAAACATGTGAGACACTCTaGCATAGGAAAGATGTAGTT +
Preference number: 5 (lower is better)
Translates to: FERSKSGLPLRRSPWHPQTCETL*HRKDVV
Trigger: AACTACATCTTTCCTATGCAAGAGTGTCTCACATGT...TTGGGGGTGCCAAGGGCTTCTCCGCAAGGGAAGCCCAGATTTACTTCTTTCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS-3UTR CAA 90 bp AGTCTGTTGTCACAGCCCTCTACAGATATCCTGAATCTACTTTACAGGTGGGCACAGGAAGCACCACCATaGATCAGCTTTATATGGCAC +
Preference number: 5 (lower is better)
Translates to: SLLSQPSTDILNLLYRWAQEAPP*ISFIWH
Trigger: GTGCCATATAAAGCTGATCAATGGTGGTGCTTCCTG...TGCCCACCTGTAAAGTAGATTCAGGATATCTGTAGAGGGCTGTGACAACAGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000287202.10
CDS CCA 72 bp CGCCCGCCATGGTCCGGCTGCCGTGCAGACCCCGGATaGCCGCCTGAGCTTCCCCTTGACTCCCGAACTTCA +
Preference number: 6 (lower is better)
Translates to: RPPWSGCRADPG*PPELPLDSRTS
Trigger: TGAAGTTCGGGAGTCAAGGGGAAGCTCAGGCGGCCATCCGGGGTCTGCACGGCAGCCGGACCATGGCGGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000287202.10
ENST00000395258.7
ENST00000437872.7
ENST00000543764.6
ENST00000567083.2
CDS CCA 72 bp CAGCTTTCGGTCCTCTCCTCGGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACGATTCATCCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: QLSVLSSALTGS*LHLDRTIHPWQ
Trigger: CTGCCAGGGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS CAA 72 bp GTCCTCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCCCTGGCAGGGTCTTCTG +
Preference number: 6 (lower is better)
Translates to: VLSSALTGSWLH*DRTIHPWQGLL
Trigger: CAGAAGACCCTGCCAGGGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS CAA 90 bp TCCTGTTCAGGAGCCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCTTCCTCTCATGGGTGTTGTGGGGATC +
Preference number: 6 (lower is better)
Translates to: SCSGASSALTGSWLH*DRTIHLPLMGVVGI
Trigger: GATCCCCACAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGGCTCCTGAACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395258.7
CDS CAA 90 bp CAGCTTTCGGTCCTCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCTTCCTCTCATGGGTGTTGTGGGGATC +
Preference number: 6 (lower is better)
Translates to: QLSVLSSALTGSWLH*DRTIHLPLMGVVGI
Trigger: GATCCCCACAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS CCA 72 bp CCACAAACAGCTTTCGGTCCTCTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGATCGGACGATTCATCC +
Preference number: 6 (lower is better)
Translates to: PQTAFGPLLGPH*QLASLGSDDSS
Trigger: GGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTGTTTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000287202.10
ENST00000567083.2
CDS CCA 72 bp GAGCCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTTaGATCGGACGATTCATCTTCCTCTCATGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: EPPRPSLAAGFT*IGRFIFLSWVL
Trigger: CAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395258.7
CDS CCA 72 bp TCCTGTTCAGGAGCCTCCTCGGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACGATTCATCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: SCSGASSALTGS*LHLDRTIHLPL
Trigger: GAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGGCTCCTGAACAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395258.7
CDS CCA 72 bp CAGCTTTCGGTCCTCTCCTCGGCCCTCACTGGCAGCTaGCTTCACTTGGATCGGACGATTCATCTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: QLSVLSSALTGS*LHLDRTIHLPL
Trigger: GAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS CAA 72 bp GGAGCCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCTTCCTCTCATGGGTGTT +
Preference number: 6 (lower is better)
Translates to: GASSALTGSWLH*DRTIHLPLMGV
Trigger: AACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGGCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395258.7
CDS CCA 72 bp GAGATCATCCTGTTCAGGAGCCTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGATCGGACGATTCATCT +
Preference number: 6 (lower is better)
Translates to: EIILFRSLLGPH*QLASLGSDDSS
Trigger: AGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGGCTCCTGAACAGGATGATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395258.7
CDS CCA 72 bp TCCTCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTTaGATCGGACGATTCATCTTCCTCTCATGGGTGTTG +
Preference number: 6 (lower is better)
Translates to: SSPRPSLAAGFT*IGRFIFLSWVL
Trigger: CAACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS CCA 72 bp CCACAAACAGCTTTCGGTCCTCTCCTCGGCCCTCACTaGCAGCTGGCTTCACTTGGATCGGACGATTCATCT +
Preference number: 6 (lower is better)
Translates to: PQTAFGPLLGPH*QLASLGSDDSS
Trigger: AGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGACCGAAAGCTGTTTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS CAA 72 bp GTCCTCTCCTCGGCCCTCACTGGCAGCTGGCTTCACTaGGATCGGACGATTCATCTTCCTCTCATGGGTGTT +
Preference number: 6 (lower is better)
Translates to: VLSSALTGSWLH*DRTIHLPLMGV
Trigger: AACACCCATGAGAGGAAGATGAATCGTCCGATCCAAGTGAAGCCAGCTGCCAGTGAGGGCCGAGGAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543764.6
CDS CCA 72 bp TGGATCGGACGATTCATCTTCCTCTCATGGGTGTTGTaGGGATCACATGAGGTAATGGGGACGCAAAAGGTC +
Preference number: 6 (lower is better)
Translates to: WIGRFIFLSWVL*GSHEVMGTQKV
Trigger: GACCTTTTGCGTCCCCATTACCTCATGTGATCCCCACAACACCCATGAGAGGAAGATGAATCGTCCGATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6
CDS GCA 72 bp CATGAGGTAATGGGGACGCAAAAGGTCTTTGTAAACTaGCAAGAGCTGGGTGCGTGGGAGGTGAGGAATTAT +
Preference number: 6 (lower is better)
Translates to: HEVMGTQKVFVN*QELGAWEVRNY
Trigger: ATAATTCCTCACCTCCCACGCACCCAGCTCTTGGCAGTTTACAAAGACCTTTTGCGTCCCCATTACCTCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395258.7
ENST00000543764.6