RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CELF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000149187

Ensembl transcript IDs: ENST00000310513.10, ENST00000358597.7, ENST00000361904.7, ENST00000395290.6, ENST00000395292.6, ENST00000422993.2, ENST00000525841.5, ENST00000526277.1, ENST00000526419.1, ENST00000528434.5, ENST00000528538.5, ENST00000530151.5, ENST00000531165.5, ENST00000532048.5, ENST00000532146.1, ENST00000534614.1, ENST00000535982.1, ENST00000539254.1, ENST00000539455.5, ENST00000543178.5

Found 1016 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGGCAGGGGGAGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTaGCTGCTCAAGCAGCCCAGGACCCTGCTGGGGCGAGCATTCCTT +
Preference number: 1 (lower is better)
Translates to: WAGGGENREVHGLTS*LLKQPRTLLGRAFL
Trigger: AAGGAATGCTCGCCCCAGCAGGGTCCTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCTCCCCCTGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR TCA 90 bp CCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCTACGGGTaGTTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCCTAAT +
Preference number: 1 (lower is better)
Translates to: PAGELPLGVQMASYG*LGAPSFLQVLTAPN
Trigger: ATTAGGGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 90 bp TCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCCTCTaGCTGGCTGCCCTTTCCCCCAGGCAGAGCGGCCTTGGGCATAAT +
Preference number: 1 (lower is better)
Translates to: SPLPGNSAAYQTLGL*LAALSPRQSGLGHN
Trigger: ATTATGCCCAAGGCCGCTCTGCCTGGGGGAAAGGGCAGCCAGGCAGAGGCCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 90 bp CAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCTACGGGTGATTaGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCCTAATGTGC +
Preference number: 1 (lower is better)
Translates to: QVNCRLVCRWPPTGD*ERPPSSRCSLPLMC
Trigger: GCACATTAGGGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCTGCACACCAAGCGGCAATTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 90 bp CCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCCTCTGCCTaGCTGCCCTTTCCCCCAGGCAGAGCGGCCTTGGGCATAATACCA +
Preference number: 1 (lower is better)
Translates to: PFQEIQQPTRHWASA*LPFPPGRAALGIIP
Trigger: TGGTATTATGCCCAAGGCCGCTCTGCCTGGGGGAAAGGGCAGCCAGGCAGAGGCCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR TCA 90 bp GCCAGCCTCCCGGAAGCCCCGGTAAGACCTGGAGGCCACACGAAGTaGCAGTCTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGA +
Preference number: 1 (lower is better)
Translates to: ASLPEAPVRPGGHTK*QSKCTGKRSKGNRG
Trigger: TCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAGACTGTCACTTCGTGTGGCCTCCAGGTCTTACCGGGGCTTCCGGGAGGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR TCA 90 bp GAGCAGAGGCAGAGCCCAGAAGCTGTGTGGGTCACAGGCAAGAGCTaGAGTAAGACCTGCAAGAGGCGGCAGGGAGCTAACTGTAGCACG +
Preference number: 1 (lower is better)
Translates to: EQRQSPEAVWVTGKS*SKTCKRRQGANCST
Trigger: CGTGCTACAGTTAGCTCCCTGCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTGGGCTCTGCCTCTGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp CCCAAACTGCCACCAGCCAGGCAAGGCCAATCCAATACTGACTGCTaGCTGGGGGAGCTCGTAATGGGTGATGCCGCCCTGCTTTTTGCA +
Preference number: 1 (lower is better)
Translates to: PKLPPARQGQSNTDC*LGELVMGDAALLFA
Trigger: TGCAAAAAGCAGGGCGGCATCACCCATTACGAGCTCCCCCAGCCAGCAGTCAGTATTGGATTGGCCTTGCCTGGCTGGTGGCAGTTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp GGGAAGGCGGAGAGAAGAAGGGGATGTGGGAAGGGAGTGGCGTTCTaGCTAAGGAGGAAGACAGAACAGAAGGCTAGGGAGCACAGCACC +
Preference number: 1 (lower is better)
Translates to: GKAERRRGCGKGVAF*LRRKTEQKAREHST
Trigger: GGTGCTGTGCTCCCTAGCCTTCTGTTCTGTCTTCCTCCTTAGCCAGAACGCCACTCCCTTCCCACATCCCCTTCTTCTCTCCGCCTTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR GCA 90 bp TCTCCCAAACTGCCACCAGCCAGGCAAGGCCAATCCAATACTGACTaGTGGCTGGGGGAGCTCGTAATGGGTGATGCCGCCCTGCTTTTT +
Preference number: 1 (lower is better)
Translates to: SPKLPPARQGQSNTD*WLGELVMGDAALLF
Trigger: AAAAAGCAGGGCGGCATCACCCATTACGAGCTCCCCCAGCCAGCAGTCAGTATTGGATTGGCCTTGCCTGGCTGGTGGCAGTTTGGGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp GTCCTACTTCCCAGCTCACCCACCCACCAGCAGCTTAAGTCTGGGTaGGATCTATCATCAGCTCCTCCCCCTGTAACCTCTTCCCTCCAC +
Preference number: 1 (lower is better)
Translates to: VLLPSSPTHQQLKSG*DLSSAPPPVTSSLH
Trigger: GTGGAGGGAAGAGGTTACAGGGGGAGGAGCTGATGATAGATCCCACCCAGACTTAAGCTGCTGGTGGGTGGGTGAGCTGGGAAGTAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 90 bp TCAGCTCCTCCCCCTGTAACCTCTTCCCTCCACAGATCCACCCTGTaGTCCTCTCCTCACCTCTCCCCCTCCACTCACATTCTTACTCAA +
Preference number: 1 (lower is better)
Translates to: SAPPPVTSSLHRSTL*SSPHLSPSTHILTQ
Trigger: TTGAGTAAGAATGTGAGTGGAGGGGGAGAGGTGAGGAGAGGAGCACAGGGTGGATCTGTGGAGGGAAGAGGTTACAGGGGGAGGAGCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 90 bp TATTGGCAAACACTGCTTCTCAATACACAGGAAGGGGAGCCTCAGTaGCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGG +
Preference number: 1 (lower is better)
Translates to: YWQTLLLNTQEGEPQ*LLPTEAALCSQTVG
Trigger: CCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCTCCCCTTCCTGTGTATTGAGAAGCAGTGTTTGCCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 90 bp AGGTCCCAGAGCCCAGGACAAATCCATGGACAAATAATGGTGAGATaGGGGAAGGCGGAGAGAAGAAGGGGATGTGGGAAGGGAGTGGCG +
Preference number: 1 (lower is better)
Translates to: RSQSPGQIHGQIMVR*GKAERRRGCGKGVA
Trigger: CGCCACTCCCTTCCCACATCCCCTTCTTCTCTCCGCCTTCCCCCATCTCACCATTATTTGTCCATGGATTTGTCCTGGGCTCTGGGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR TCA 90 bp ACCTCTCCCCCTCCACTCACATTCTTACTCAAGTCTCCAAGACCCTaGGGCTGGATGGTGCCACAAGAGAGGAGGGTCAGTTTCCCTCAG +
Preference number: 1 (lower is better)
Translates to: TSPPPLTFLLKSPRP*GWMVPQERRVSFPQ
Trigger: CTGAGGGAAACTGACCCTCCTCTCTTGTGGCACCATCCAGCCTCAGGGTCTTGGAGACTTGAGTAAGAATGTGAGTGGAGGGGGAGAGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 90 bp TTGGGCATAATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCCTaGTGGGATCCCTTCCTTCATCAACCTTGGTGTGGAGGATGCTCA +
Preference number: 1 (lower is better)
Translates to: LGIIPGNLPAPEQKP*WDPFLHQPWCGGCS
Trigger: TGAGCATCCTCCACACCAAGGTTGATGAAGGAAGGGATCCCAGCAGGGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR TCA 90 bp AAGACTGTAGTATTGTGCTTGTCACCTAGGAAAAGCGCCAGCAGGTaGATTGCCGCTTGGTGTGCAGATGGCCTCCTACGGGTGATTGGG +
Preference number: 1 (lower is better)
Translates to: KTVVLCLSPRKSASR*IAAWCADGLLRVIG
Trigger: CCCAATCACCCGTAGGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTGACAAGCACAATACTACAGTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTaGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAG +
Preference number: 1 (lower is better)
Translates to: YLLRFQIPETQGSHP*LWLQSHLNRATSAQ
Trigger: CTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR CCA 90 bp CTCCTCCTCCCCCAACTAGATGGTATTGATCACTCTGCCCACAAATaGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCC +
Preference number: 1 (lower is better)
Translates to: LLLPQLDGIDHSAHK*YPLQQELQALLGFA
Trigger: GGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGGGAGGAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTaGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGGTGAC +
Preference number: 1 (lower is better)
Translates to: CPQMVPPSARTASPS*ICLHEKMVAWDGGD
Trigger: GTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp CAGCAAGAACTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATaGTGGCTTGGGATGGAGGTGACATTCCTTGCTGTGGTGAACTGC +
Preference number: 1 (lower is better)
Translates to: QQELQALLGFAFMRK*WLGMEVTFLAVVNC
Trigger: GCAGTTCACCACAGCAAGGAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp TCTGGGACACCTCAATCAAGGAGGCAAGGGAGAATTTCTGGCCACTaGCAAATGAAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGT +
Preference number: 1 (lower is better)
Translates to: SGTPQSRRQGRISGH*QMKHTGLQGPSDSS
Trigger: ACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCTCCCTTGCCTCCTTGATTGAGGTGTCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp ATGAAGCCCTCAGGGTCTGGTATCAAAGGTGGGTGGATTGCACCTTaGCCTCTTATGTCATTAGGAAAGGGGTTTCATAAGGTCCCAGAG +
Preference number: 1 (lower is better)
Translates to: MKPSGSGIKGGWIAP*PLMSLGKGFHKVPE
Trigger: CTCTGGGACCTTATGAAACCCCTTTCCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 90 bp CCATCAGCAGGTATGAAGCCCTCAGGGTCTGGTATCAAAGGTGGGTaGATTGCACCTTGGCCTCTTATGTCATTAGGAAAGGGGTTTCAT +
Preference number: 1 (lower is better)
Translates to: PSAGMKPSGSGIKGG*IAPWPLMSLGKGFH
Trigger: ATGAAACCCCTTTCCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTCATACCTGCTGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 90 bp AAACCCATCAGCAGGTATGAAGCCCTCAGGGTCTGGTATCAAAGGTaGGTGGATTGCACCTTGGCCTCTTATGTCATTAGGAAAGGGGTT +
Preference number: 1 (lower is better)
Translates to: KPISRYEALRVWYQR*VDCTLASYVIRKGV
Trigger: AACCCCTTTCCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTCATACCTGCTGATGGGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR TCA 90 bp CACCTCAATCAAGGAGGCAAGGGAGAATTTCTGGCCACTGGCAAATaGAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGTACACCAA +
Preference number: 1 (lower is better)
Translates to: HLNQGGKGEFLATGK*SILACRDLLIQVHQ
Trigger: TTGGTGTACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCTCCCTTGCCTCCTTGATTGAGGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR TCA 90 bp CCTTTATTCTTATCTCTGCTGCTAGGGGTCAAGACTGGTATTTGTTaGGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGT +
Preference number: 1 (lower is better)
Translates to: PLFLSLLLGVKTGIC*GFRFQRPRDPIPGC
Trigger: ACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAGTCTTGACCCCTAGCAGCAGAGATAAGAATAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR GCA 90 bp CAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTaGCTTCATGAGAAAATGGTGGCTTGGGATGGAGGTGACATTCCT +
Preference number: 1 (lower is better)
Translates to: QMVPPSARTASPSWI*LHEKMVAWDGGDIP
Trigger: AGGAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp TCGTCTGTGTTAAATGTTTCCCTGTCCCCCTTCCCCAGGGTGGTTTaGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCAAA +
Preference number: 1 (lower is better)
Translates to: SSVLNVSLSPFPRVV*CWSFSTHTGYKHSK
Trigger: TTTGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAAGGGGGACAGGGAAACATTTAACACAGACGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp ACTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTaGGATGGAGGTGACATTCCTTGCTGTGGTGAACTGCAAAGAAGG +
Preference number: 1 (lower is better)
Translates to: TASPSWICLHEKMVA*DGGDIPCCGELQRR
Trigger: CCTTCTTTGCAGTTCACCACAGCAAGGAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp CAATGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATaGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAG +
Preference number: 1 (lower is better)
Translates to: QWDNPTPPATCTTVR*SIPVCYPQGQHDKE
Trigger: CTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR TCA 90 bp ATAGGTGTCAAAAACTATTTCCCAGAAGGTAGCTGTACAGGAGTTTaGGTCTCCAGCTGCCAGGGCATTAGGTGTCTAGTCACTCCACTC +
Preference number: 1 (lower is better)
Translates to: IGVKNYFPEGSCTGV*VSSCQGIRCLVTPL
Trigger: GAGTGGAGTGACTAGACACCTAATGCCCTGGCAGCTGGAGACTCAAACTCCTGTACAGCTACCTTCTGGGAAATAGTTTTTGACACCTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp CAAGAACTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGTaGCTTGGGATGGAGGTGACATTCCTTGCTGTGGTGAACTGCAAA +
Preference number: 1 (lower is better)
Translates to: QELQALLGFAFMRKW*LGMEVTFLAVVNCK
Trigger: TTTGCAGTTCACCACAGCAAGGAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR GCA 90 bp AAATGGTGGCTTGGGATGGAGGTGACATTCCTTGCTGTGGTGAACTaGAAAGAAGGAAACCAGGCAATGTATTCCATAGAGGCCTTTAAA +
Preference number: 1 (lower is better)
Translates to: KWWLGMEVTFLAVVN*KEGNQAMYSIEAFK
Trigger: TTTAAAGGCCTCTATGGAATACATTGCCTGGTTTCCTTCTTTGCAGTTCACCACAGCAAGGAATGTCACCTCCATCCCAAGCCACCATTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 90 bp TTTGCACATGCTAACAATGGACACAGGGAAAAGTCAAAAAGGACATaGAGGACACCAAGAACACATCTAATTGCCAGAGACAGAAGGGAA +
Preference number: 1 (lower is better)
Translates to: FAHANNGHREKSKRT*RTPRTHLIARDRRE
Trigger: TTCCCTTCTGTCTCTGGCAATTAGATGTGTTCTTGGTGTCCTCCATGTCCTTTTTGACTTTTCCCTGTGTCCATTGTTAGCATGTGCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 90 bp AACACAGGACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTaGTTCAGCTTAAGAAGTGTATGTTTCACGTTCCTTAGAGGACAA +
Preference number: 1 (lower is better)
Translates to: NTGHISPSAQNFKFT*FSLRSVCFTFLRGQ
Trigger: TTGTCCTCTAAGGAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGTCCTGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR GCA 90 bp TTAGAACAGTTTTATCCTTTGAAACACAGGACACATTTCTCCCAGTaGGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATG +
Preference number: 1 (lower is better)
Translates to: LEQFYPLKHRTHFSQ*AEFQVYVVQLKKCM
Trigger: CATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGTCCTGTGTTTCAAAGGATAAAACTGTTCTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR CCA 90 bp AGTTTCAATCATACACAGCACCCTGTGTGTATAACAATCACATTCTaGATTCTACAAAATCCTGGCCTTTTCCAGAGATATAATTTAGGT +
Preference number: 1 (lower is better)
Translates to: SFNHTQHPVCITITF*ILQNPGLFQRYNLG
Trigger: ACCTAAATTATATCTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTATACACACAGGGTGCTGTGTATGATTGAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp GTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGAGCCAGTGCCGGGTaGCTGGTGCCCAGGGCTGTA +
Preference number: 2 (lower is better)
Translates to: VPPANRGGSVQSDCGVHSRASAG*LVPRAV
Trigger: TACAGCCCTGGGCACCAGCCACCCGGCACTGGCTCT...GCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR GCA 90 bp GTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCGTGATGAAGAGCCAGTaGCGGGTGGCTGGTGCCCAG +
Preference number: 2 (lower is better)
Translates to: VPPANRGGSVQSDCGVHSVMKSQ*RVAGAQ
Trigger: CTGGGCACCAGCCACCCGGCACTGGCTCTTCATCAC...GCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR TCA 90 bp AGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTATGGCCTCCTACGGGTaGTTGGGAGCGCCCTCCTTC +
Preference number: 2 (lower is better)
Translates to: SLSASCQQRRLCAVRLWGMASYG*LGAPSF
Trigger: GAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCAT...ACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR GCA 90 bp GGGCCCAAAGTGCAGCCTGCGGTCAAAAAGGAAAGGGGGTTCAGGTGCTCTCCGGTCTCACCAGCTGGCTaGTCAAGCAGCCCAGGACCC +
Preference number: 2 (lower is better)
Translates to: GPKVQPAVKKERGFRCSPVSPAG*SSSPGP
Trigger: GGGTCCTGGGCTGCTTGAGCAGCCAGCTGGTGAGAC...CGGAGAGCACCTGAACCCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR GCA 90 bp CAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGCCTGAGGCTGGATGGTaGCACAAGAGAGGAGGGTCA +
Preference number: 2 (lower is better)
Translates to: QRRLCAVRLWGAQQSLRLPEAGW*HKRGGS
Trigger: TGACCCTCCTCTCTTGTGGCACCATCCAGCCTCAGG...CAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR GCA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTCTCTTACCCACCTGCTaGCACCTTCTAGGCTCTACC +
Preference number: 2 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFLLPTC*HLLGST
Trigger: GGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAG...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR TCA 90 bp AGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGGCTGCATTCAAGGTCACAGGCAAGAGCTaGAGTAAGACCTGCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RPWPLKGNPGDSGLAAFKVTGKS*SKTCKR
Trigger: CCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGAC...CTTGAATGCAGCCAGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR GCA 90 bp TTAGCTTCCATCCAGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTCAAGGGCAGTGCTACTaGTGTGCTAACTCACTGGGC +
Preference number: 2 (lower is better)
Translates to: LASIQALATQGEPRRQWSQGQCY*CANSLG
Trigger: GCCCAGTGAGTTAGCACAGCAGTAGCACTGCCCTTG...AGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCTGGATGGAAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp CTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCAAAGGGAGTGGCGTTCTaGCTAAGGAGGAAGACAGAA +
Preference number: 2 (lower is better)
Translates to: LSASCQQRRLCAVRLWGAKGVAF*LRRKTE
Trigger: TTCTGTCTTCCTCCTTAGCCAGAACGCCACTCCCTT...TGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp AGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTCATTCCTTGCTGTGGTaGACTGCAAAGAAGGAAACC +
Preference number: 2 (lower is better)
Translates to: SLSASCQQRRLCAVRLWGHSLLW*TAKKET
Trigger: GGTTTCCTTCTTTGCAGTTCACCACAGCAAGGAATG...ACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCCTCCTACGGGTGATTaGGAGCGCCCTCCTTCCTCC +
Preference number: 2 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGPPTGD*ERPPSS
Trigger: GGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGG...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CCA 90 bp CTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCAAGGGAACCTAAGGCTTaGATTTTCCATGAAGCACCC +
Preference number: 2 (lower is better)
Translates to: LSASCQQRRLCAVRLWGAREPKA*IFHEAP
Trigger: GGGTGCTTCATGGAAAATCCAAGCCTTAGGTTCCCT...TGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp CAGAGCGGCCTTGGGCATAATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCGGTGCTCTCCGCAGTTaGGAACTCAGAAGAAAAACA +
Preference number: 2 (lower is better)
Translates to: QSGLGHNTRQPASPRAETGALRS*ELRRKT
Trigger: TGTTTTTCTTCTGAGTTCTCAACTGCGGAGAGCACC...GGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAAGGCCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR GCA 90 bp AGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGGCTGCATTCAAGGGAGGTGACATTCCTTaGTGTGGTGAACTGCAAAGA +
Preference number: 2 (lower is better)
Translates to: RPWPLKGNPGDSGLAAFKGGDIP*CGELQR
Trigger: TCTTTGCAGTTCACCACAGCAAGGAATGTCACCTCC...CTTGAATGCAGCCAGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR GCA 90 bp CAGAGCGGCCTTGGGCATAATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCCCCTTCAGCAAGAACTaGAAGCCCTTCTTGGATTTG +
Preference number: 2 (lower is better)
Translates to: QSGLGHNTRQPASPRAETPFSKN*KPFLDL
Trigger: CAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGG...GGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAAGGCCGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCTCCAATACTGACTGCTaGCTGGGGGAGCTCGTAATG +
Preference number: 2 (lower is better)
Translates to: QKLCGSQARAEVRPARGGSNTDC*LGELVM
Trigger: CATTACGAGCTCCCCCAGCCAGCAGTCAGTATTGGA...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCGCCTTCATGAGAAAATaGTGGCTTGGGATGGAGGTG +
Preference number: 2 (lower is better)
Translates to: HLGKAPAGELPLGVQMASAFMRK*WLGMEV
Trigger: CACCTCCATCCCAAGCCACCATTTTCTCATGAAGGC...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp GGAGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTGGCTGCTCAAGCAGCCCTCCCATCCCTGGCTGTaGCTACAGTCACATCTTAAC +
Preference number: 2 (lower is better)
Translates to: GGENREVHGLTSWLLKQPSHPWL*LQSHLN
Trigger: GTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGA...GGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CAA 90 bp GCACAGCTCTCTCCTCTGCCAATTCACAGCATTAACACCTTCCCCTaGGGCAGGTTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTA +
Preference number: 2 (lower is better)
Translates to: AQLSPLPIHSINTFP*GRLAGLQTGHRKSV
Trigger: TACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAACCTGCCCAAGGGGAAGGTGTTAATGCTGTGAATTGGCAGAGGAGAGAGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp TGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCTTCCGGACAAGAATCTaGAAAATAGGTGTCAAAAAC +
Preference number: 2 (lower is better)
Translates to: WPPTGDWERPPSSRCSLPFRTRI*KIGVKN
Trigger: GTTTTTGACACCTATTTTTCAGATTCTTGTCCGGAA...GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGGTCACAGGCAAGAGCTaGAGTAAGACCAGAAGACCC +
Preference number: 2 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLVTGKS*SKTRRP
Trigger: GGGTCTTCTGGTCTTACTTCAGCTCTTGCCTGTGAC...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
3UTR-3UTR GCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCCTCCTTCCTCCAGGTaGTCACTGCCCCTAATGTGC +
Preference number: 2 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGPPSSR*SLPLMC
Trigger: GCACATTAGGGGCAGTGAGCACCTGGAGGAAGGAGG...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CCA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTTTCATGAGAAAATGGTaGCTTGGGATGGAGGTGACA +
Preference number: 2 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFFMRKW*LGMEVT
Trigger: TGTCACCTCCATCCCAAGCCACCATTTTCTCATGAA...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTGTTTGGGGCAAATCCTaGTCATCGTCTGTGTTAAAT +
Preference number: 2 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFVWGKS*SSSVLN
Trigger: ATTTAACACAGACGATGATCAGGATTTGCCCCAAAC...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp GGCAGGTTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTAGTTTCAATCATAAGCTGTACAGGAGTTTaGGTCTCCAGCTGCCAGGGC +
Preference number: 2 (lower is better)
Translates to: GRLAGLQTGHRKSVVSIISCTGV*VSSCQG
Trigger: GCCCTGGCAGCTGGAGACTCAAACTCCTGTACAGCT...TATGATTGAAACTACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAACCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR GCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGAGCCTCTTACCCACCTaGTGCCACCTTCTAGGCTCT +
Preference number: 2 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGSLLPT*CHLLGS
Trigger: AGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCT...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CAA 90 bp GGGAAGAGGACCAGAATTTCTGCTCAATCTTATGGGGATGGCCCTTaGTTCCCAGAAATCCAAGCTCTTAGCTTCCATCCAGGCCCTGGC +
Preference number: 2 (lower is better)
Translates to: GKRTRISAQSYGDGP*FPEIQALSFHPGPG
Trigger: GCCAGGGCCTGGATGGAAGCTAAGAGCTTGGATTTCTGGGAACAAAGGGCCATCCCCATAAGATTGAGCAGAAATTCTGGTCCTCTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp CAGTCTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACAAGTCTCCAAGACCCTaGGGCTGGATGGTGCCACAA +
Preference number: 2 (lower is better)
Translates to: QSKCTGKRSKGNRGESCHKSPRP*GWMVPQ
Trigger: TTGTGGCACCATCCAGCCTCAGGGTCTTGGAGACTT...GTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR TCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCATTGGATTTGCCTTCATaGGAAAATGGTGGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPLDLPS*ENGGLG
Trigger: TCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAA...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR TCA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCCCAACTAGATGGTATTaGTCACTCTGCCCACAAATG +
Preference number: 2 (lower is better)
Translates to: QKLCGSQARAEVRPARGGPTRWY*SLCPQM
Trigger: CATTTGTGGGCAGAGTGATCAATACCATCTAGTTGG...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR GCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCCTTGGTGTGGAGGATaGTCAATAGCGCTTCCACCT +
Preference number: 2 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGPWCGG*SIALPP
Trigger: AGGTGGAAGCGCTATTGAGCATCCTCCACACCAAGG...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CCA 90 bp AGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTGGCTGCTCAAGCAGCCCAGAGCCTAGAAACGGACTaGCTGTGTGTTCACAGAAAT +
Preference number: 2 (lower is better)
Translates to: RREQRSAWSHQLAAQAAQSLETD*LCVHRN
Trigger: ATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCT...CTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp TTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTAGTTTCAATCATACACAGCCGCTTGGTGTGCAGATaGCCTCCTACGGGTGATTGG +
Preference number: 2 (lower is better)
Translates to: LAGLQTGHRKSVVSIIHSRLVCR*PPTGDW
Trigger: CCAATCACCCGTAGGAGGCCATCTGCACACCAAGCG...GCTGTGTATGATTGAAACTACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp AACCTTCACACAACAGAAAAGGATTGCTTAAGACTTGACAGCGAGTCTCCACTCAGGCCAATCCAATACTaGCTGCTGGCTGGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: NLHTTEKDCLRLDSESPLRPIQY*LLAGGA
Trigger: AGCTCCCCCAGCCAGCAGTCAGTATTGGATTGGCCT...GAGTGGAGACTCGCTGTCAAGTCTTAAGCAATCCTTTTCTGTTGTGTGAAGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR GCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGAGAAAGAACAATACATaGGGTCTCCTCAAGCCCCAC +
Preference number: 2 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGRKNNT*GLLKPH
Trigger: GTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCT...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CCA 90 bp CAGTCTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACAAAAACTGGCTTGCTTaGCACCCAGGGACAGTAGCT +
Preference number: 2 (lower is better)
Translates to: QSKCTGKRSKGNRGESCHKNWLA*HPGTVA
Trigger: AGCTACTGTCCCTGGGTGCCAAGCAAGCCAGTTTTT...GTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAGACTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CCA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGTCCTCTCTCTTGGGGTaGTTTGGGGCAAATCCTGAT +
Preference number: 2 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQSSLLG*FGANPD
Trigger: ATCAGGATTTGCCCCAAACCACCCCAAGAGAGAGGA...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CAA 90 bp ATCGTCTGTGTTAAATGTTTCCCTGTCCCCCTTCCCCAGGGTGGTTaGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCAA +
Preference number: 2 (lower is better)
Translates to: IVCVKCFPVPLPQGG*VLVLLNTHWLQTQQ
Trigger: TTGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAAGGGGGACAGGGAAACATTTAACACAGACGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CAA 90 bp AACCCCTTTATTCTTATCTCTGCTGCTAGGGGTCAAGACTGGTATTaGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGG +
Preference number: 2 (lower is better)
Translates to: NPFILISAARGQDWY*LRFQIPETQGSHPW
Trigger: CCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAGTCTTGACCCCTAGCAGCAGAGATAAGAATAAAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR-3UTR GCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGTGCCGCCCTGCTTTTTaGATATGTCAGGCTAACAGG +
Preference number: 2 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKCRPAF*ICQANR
Trigger: CCTGTTAGCCTGACATATGCAAAAAGCAGGGCGGCA...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR GCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTCTGTTTCTCCCAAACTaGCACCAGCCAGGCAAGGCC +
Preference number: 2 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCLFLPN*HQPGKA
Trigger: GGCCTTGCCTGGCTGGTGGCAGTTTGGGAGAAACAG...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR GCA 90 bp CCCCAACTAGATGGTATTGATCACTCTGCCCACAAATGGTACCCCCTTCAGCAACTTGCTGTGGTGAACTaGAAAGAAGGAAACCAGGCA +
Preference number: 2 (lower is better)
Translates to: PQLDGIDHSAHKWYPLQQLAVVN*KEGNQA
Trigger: TGCCTGGTTTCCTTCTTTGCAGTTCACCACAGCAAG...TTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQEEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGTTCCCCAGGGTGGTTTaGTGTTGGTCCTTCTCAACA +
Preference number: 2 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMFPRVV*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGTCCTCTCTCTTGGGGTaGTTTGGGGCAAATCCTGAT +
Preference number: 2 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKSSLLG*FGANPD
Trigger: ATCAGGATTTGCCCCAAACCACCCCAAGAGAGAGGA...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CAA 90 bp TCAAGCATCAGAGAAGCTGAAGAGACAGGGATTTGGACGATGTACTaGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGG +
Preference number: 2 (lower is better)
Translates to: SSIREAEETGIWTMY*TPHRHALGTTMNKR
Trigger: CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTCAGCTTCTCTGATGCTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR CAA 90 bp AGGCAAGGGAGAATTTCTGGCCACTGGCAAATGAAGCATACTGGCTaGCAGGGACCTTCTGATTCAAGTACACCAAGAAATAAGCTCCTC +
Preference number: 2 (lower is better)
Translates to: RQGRISGHWQMKHTG*QGPSDSSTPRNKLL
Trigger: GAGGAGCTTATTTCTTGGTGTACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCTCCCTTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR TCA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTTTGGATTTGCCTTCATaGGAAAATGGTGGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPLDLPS*ENGGLG
Trigger: TCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAA...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCCATCACATTTTGCTGTaGAGACTGTTGGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTHHILL*RLLEQA
Trigger: TGCTTGTTCCAACAGTCTCCACAGCAAAATGTGATG...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGAGGGTGGTTTGGTGTTaGTCCTTCTCAACACACACT +
Preference number: 2 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMRVVWC*SFSTHT
Trigger: AGTGTGTGTTGAGAAGGACCAACACCAAACCACCCT...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp AACCTTCACACAACAGAAAAGGATTGCTTAAGACTTGACAGCGAGTCTCCACTCCTCAGTCCTCTCTCTTaGGGTGGTTTGGGGCAAATC +
Preference number: 2 (lower is better)
Translates to: NLHTTEKDCLRLDSESPLLSPLS*GGLGQI
Trigger: GATTTGCCCCAAACCACCCCAAGAGAGAGGACTGAG...GAGTGGAGACTCGCTGTCAAGTCTTAAGCAATCCTTTTCTGTTGTGTGAAGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: QKYKHHAVCASRAALKTIFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR-3UTR TCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 2 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCCTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATT +
Preference number: 2 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTLVGLL*RQLQRI
Trigger: AATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAG...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR TCA 90 bp AGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCGTTTGGGGCAAATCCTaGTCATCGTCTGTGTTAAAT +
Preference number: 2 (lower is better)
Translates to: RKEQLSQLQWDNPTPPATVWGKS*SSSVLN
Trigger: ATTTAACACAGACGATGATCAGGATTTGCCCCAAAC...GGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR GCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 2 (lower is better)
Translates to: YKHHAVCASRAALKTITKDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR-3UTR CCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 2 (lower is better)
Translates to: QKYKHHAVCASRAALKTIEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCACTCAGTCCTCTCTCTTaGGGTGGTTTGGGGCAAATC +
Preference number: 2 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPLSPLS*GGLGQI
Trigger: GATTTGCCCCAAACCACCCCAAGAGAGAGGACTGAG...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTACAGCATGTCCTTCCTaGTTCTCTACCCCCACAGCA +
Preference number: 2 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCTACPS*FSTPTA
Trigger: TGCTGTGGGGGTAGAGAACCAGGAAGGACATGCTGT...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR-3UTR CCA 90 bp CCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGCATCACATTTTGCTGTaGAGACTGTTGGAACAAGCA +
Preference number: 2 (lower is better)
Translates to: PPSARTASPSWICLHEKMHHILL*RLLEQA
Trigger: TGCTTGTTCCAACAGTCTCCACAGCAAAATGTGATG...CATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp AAATTTTTCAGGGAAGAGGACCAGAATTTCTGCTCAATCTTATGGGGATGGCCCAGGGTGGTTTGGTGTTaGTCCTTCTCAACACACACT +
Preference number: 2 (lower is better)
Translates to: KFFREEDQNFCSILWGWPRVVWC*SFSTHT
Trigger: AGTGTGTGTTGAGAAGGACCAACACCAAACCACCCT...GGGCCATCCCCATAAGATTGAGCAGAAATTCTGGTCCTCTTCCCTGAAAAATTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTTCCCATCCCTGGCTGTaGCTACAGTCACATCTTAAC +
Preference number: 2 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCSHPWL*LQSHLN
Trigger: GTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGA...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR-3UTR TCA 90 bp AAACAAAGCCTAGAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 2 (lower is better)
Translates to: KQSLETDWLCVHRNTNTTTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...CGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR-3UTR TCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGCTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATT +
Preference number: 2 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKLVGLL*RQLQRI
Trigger: AATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAG...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR TCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGTTCCGGACAAGAATCTaGAAAATAGGTGTCAAAAAC +
Preference number: 2 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQEFRTRI*KIGVKN
Trigger: GTTTTTGACACCTATTTTTCAGATTCTTGTCCGGAA...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp CTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGGTGACATTCAAAAACCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: LLGFAFMRKWWLGMEVTFKNLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGTTTTT...GAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTTGTACAACAGTAAGATaGTCAATCCCTGTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCCTTVR*SIPVCY
Trigger: GTAACAGACAGGGATTGACCATCTTACTGTTGTACA...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR-3UTR CCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTAAAAACCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 2 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCKNLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGTTTTT...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp TGCCGCTTGGTGTGCAGATGGCCTCCTACGGGTGATTaGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCC +
Preference number: 3 (lower is better)
Translates to: CRLVCRWPPTGD*ERPPSSRCSLP
Trigger: GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCTGCACACCAAGCGGCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 72 bp GAAATTCAGCAGCCTACCAGACACTGGGCCTCTGCCTaGCTGCCCTTTCCCCCAGGCAGAGCGGCCTTGGGC +
Preference number: 3 (lower is better)
Translates to: EIQQPTRHWASA*LPFPPGRAALG
Trigger: GCCCAAGGCCGCTCTGCCTGGGGGAAAGGGCAGCCAGGCAGAGGCCCAGTGTCTGGTAGGCTGCTGAATTTC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 72 bp GAGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTaGAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAG +
Preference number: 3 (lower is better)
Translates to: EPQCLLPTEAAL*SQTVGCTAVSQ
Trigger: CTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 72 bp CCACCAGCCAGGCAAGGCCAATCCAATACTGACTGCTaGCTGGGGGAGCTCGTAATGGGTGATGCCGCCCTG +
Preference number: 3 (lower is better)
Translates to: PPARQGQSNTDC*LGELVMGDAAL
Trigger: CAGGGCGGCATCACCCATTACGAGCTCCCCCAGCCAGCAGTCAGTATTGGATTGGCCTTGCCTGGCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp GGAGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTaGCTGCTCAAGCAGCCCAGGACCCTGCTGGGGCGA +
Preference number: 3 (lower is better)
Translates to: GGENREVHGLTS*LLKQPRTLLGR
Trigger: TCGCCCCAGCAGGGTCCTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR TCA 72 bp GAATTGCCGCTTGGTGTGCAGATGGCCTCCTACGGGTaGTTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACT +
Preference number: 3 (lower is better)
Translates to: ELPLGVQMASYG*LGAPSFLQVLT
Trigger: AGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCTGCACACCAAGCGGCAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 72 bp GAGAGAACAGAGAAGTGCATGGTCTCACCAGCTGGCTaGTCAAGCAGCCCAGGACCCTGCTGGGGCGAGCAT +
Preference number: 3 (lower is better)
Translates to: ERTEKCMVSPAG*SSSPGPCWGEH
Trigger: ATGCTCGCCCCAGCAGGGTCCTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 72 bp TCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTaGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTCTG +
Preference number: 3 (lower is better)
Translates to: SCQQRRLCAVRL*GAQQSLRLGFL
Trigger: CAGAAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR TCA 72 bp CCGGAAGCCCCGGTAAGACCTGGAGGCCACACGAAGTaGCAGTCTAAGTGCACAGGCAAACGCTCTAAGGGC +
Preference number: 3 (lower is better)
Translates to: PEAPVRPGGHTK*QSKCTGKRSKG
Trigger: GCCCTTAGAGCGTTTGCCTGTGCACTTAGACTGTCACTTCGTGTGGCCTCCAGGTCTTACCGGGGCTTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR TCA 72 bp CAGAGCCCAGAAGCTGTGTGGGTCACAGGCAAGAGCTaGAGTAAGACCTGCAAGAGGCGGCAGGGAGCTAAC +
Preference number: 3 (lower is better)
Translates to: QSPEAVWVTGKS*SKTCKRRQGAN
Trigger: GTTAGCTCCCTGCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTGGGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR GCA 72 bp ACACTGCTTCTCAATACACAGGAAGGGGAGCCTCAGTaGCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAG +
Preference number: 3 (lower is better)
Translates to: TLLLNTQEGEPQ*LLPTEAALCSQ
Trigger: CTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCTCCCCTTCCTGTGTATTGAGAAGCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR GCA 72 bp TCTTTGGCCTGGGGAAAGAACTGTGCTCAAGGGCAGTaGTACTGCTGTGCTAACTCACTGGGCAGGGGGAGG +
Preference number: 3 (lower is better)
Translates to: SLAWGKNCAQGQ*YCCANSLGRGR
Trigger: CCTCCCCCTGCCCAGTGAGTTAGCACAGCAGTAGCACTGCCCTTGAGCACAGTTCTTTCCCCAGGCCAAAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp CAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: QRRLCAVRLWGAQQSLRLIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...CAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CAA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGCTTCCCCAGGGTGGTTaGGTGTTGGTCCTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRLPQGG*VLVLLN
Trigger: GTTGAGAAGGACCAACACCAAACCACCCTGGGGAAG...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR GCA 72 bp ATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCCTaGTGGGATCCCTTCCTTCATCAACCTTGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: IPGNLPAPEQKP*WDPFLHQPWCG
Trigger: TCCACACCAAGGTTGATGAAGGAAGGGATCCCAGCAGGGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 72 bp CTGGAGTGGTTACAGGAGGGGCCTGCCAGACCCCTGTaGGAATACTACATCTGGGACACCTCAATCAAGGAG +
Preference number: 3 (lower is better)
Translates to: LEWLQEGPARPL*EYYIWDTSIKE
Trigger: CTCCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCTCCTGTAACCACTCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CAA 90 bp AGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGGCTGCATTCAAGATGAAGCATACTGGCTaGCAGGGACCTTCTGATTCA +
Preference number: 3 (lower is better)
Translates to: RPWPLKGNPGDSGLAAFKMKHTG*QGPSDS
Trigger: TGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCAT...CTTGAATGCAGCCAGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR TCA 72 bp GAGAGAGAACAGGAACACTCACTGTGTGTACAGCCCTaGAATGAGGTGGGCGGGCAGGGGTTGGGTAATGAC +
Preference number: 3 (lower is better)
Translates to: EREQEHSLCVQP*NEVGGQGLGND
Trigger: GTCATTACCCAACCCCTGCCCGCCCACCTCATTTCAGGGCTGTACACACAGTGAGTGTTCCTGTTCTCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 72 bp AGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTaGCTGTGGCTACAGTCACATCTTAACAGGGCCACC +
Preference number: 3 (lower is better)
Translates to: RFQIPETQGSHP*LWLQSHLNRAT
Trigger: GGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR TCA 72 bp CCTCCACTCACATTCTTACTCAAGTCTCCAAGACCCTaGGGCTGGATGGTGCCACAAGAGAGGAGGGTCAGT +
Preference number: 3 (lower is better)
Translates to: PPLTFLLKSPRP*GWMVPQERRVS
Trigger: ACTGACCCTCCTCTCTTGTGGCACCATCCAGCCTCAGGGTCTTGGAGACTTGAGTAAGAATGTGAGTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR CCA 72 bp AGAAAACCCATCAGCAGGTATGAAGCCCTCAGGGTCTaGTATCAAAGGTGGGTGGATTGCACCTTGGCCTCT +
Preference number: 3 (lower is better)
Translates to: RKPISRYEALRV*YQRWVDCTLAS
Trigger: AGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTCATACCTGCTGATGGGTTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp CCTGAAATGAGGTGGGCGGGCAGGGGTTGGGTAATGACAGGGAACTTTTGCACAAGGTGCTCTCCGCAGTaGAGAACTCAGAAGAAAAAC +
Preference number: 3 (lower is better)
Translates to: PEMRWAGRGWVMTGNFCTRCSPQ*RTQKKN
Trigger: GTTTTTCTTCTGAGTTCTCAACTGCGGAGAGCACCT...TGTGCAAAAGTTCCCTGTCATTACCCAACCCCTGCCCGCCCACCTCATTTCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp TTAGCTTCCATCCAGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGTGAAGACTGTAGTATaGTGCTTGTCACCTAGGAAA +
Preference number: 3 (lower is better)
Translates to: LASIQALATQGEPRRQWSVKTVV*CLSPRK
Trigger: TTTCCTAGGTGACAAGCACAATACTACAGTCTTCAC...AGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCTGGATGGAAGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGCTCTCTTGGGGTGGTTaGGGGCAAATCCTGATCATC +
Preference number: 3 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQLSWGG*GQILII
Trigger: GATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CAA 90 bp CCCCAACTAGATGGTATTGATCACTCTGCCCACAAATGGTACCCCCTTCAGCAAACTCAGTCCTCTCTCTaGGGGTGGTTTGGGGCAAAT +
Preference number: 3 (lower is better)
Translates to: PQLDGIDHSAHKWYPLQQTQSSL*GWFGAN
Trigger: ATTTGCCCCAAACCACCCCAAGAGAGAGGACTGAGT...TTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR GCA 72 bp CCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTaGCTTCATGAGAAAATGGTGGCTTGGGATGGAGGT +
Preference number: 3 (lower is better)
Translates to: PPSARTASPSWI*LHEKMVAWDGG
Trigger: ACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR GCA 72 bp GAAGCCCTCAGGGTCTGGTATCAAAGGTGGGTGGATTaGACCTTGGCCTCTTATGTCATTAGGAAAGGGGTT +
Preference number: 3 (lower is better)
Translates to: EALRVWYQRWVD*TLASYVIRKGV
Trigger: AACCCCTTTCCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 72 bp AGCAGGTATGAAGCCCTCAGGGTCTGGTATCAAAGGTaGGTGGATTGCACCTTGGCCTCTTATGTCATTAGG +
Preference number: 3 (lower is better)
Translates to: SRYEALRVWYQR*VDCTLASYVIR
Trigger: CCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTCATACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCTCCAACATTTGGCATTaGGTTTTATCCACAGGTTTT +
Preference number: 3 (lower is better)
Translates to: HLGKAPAGELPLGVQMASSNIWH*VLSTGF
Trigger: AAAACCTGTGGATAAAACCAAATGCCAAATGTTGGA...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
3UTR-3UTR CAA 90 bp CTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACTTCACAGGGTGGTTTGGTGTaGGTCCTTCTCAACACACAC +
Preference number: 3 (lower is better)
Translates to: LSAQANALRAIEEKVATSQGGLV*VLLNTH
Trigger: GTGTGTGTTGAGAAGGACCAACACCAAACCACCCTG...TGAAGTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCAATAAACTAACCTCTTaGGCTGTTTCTCCCAAACTG +
Preference number: 3 (lower is better)
Translates to: QKLCGSQARAEVRPARGGNKLTS*AVSPKL
Trigger: CAGTTTGGGAGAAACAGCCAAAGAGGTTAGTTTATT...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CAA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAAATAAACTAACCTCTTaGGCTGTTTCTCCCAAACTG +
Preference number: 3 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPNKLTS*AVSPKL
Trigger: CAGTTTGGGAGAAACAGCCAAAGAGGTTAGTTTATT...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR TCA 72 bp CAAGGAGGCAAGGGAGAATTTCTGGCCACTGGCAAATaGAGCATACTGGCTTGCAGGGACCTTCTGATTCAA +
Preference number: 3 (lower is better)
Translates to: QGGKGEFLATGK*SILACRDLLIQ
Trigger: TTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCTCCCTTGCCTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp CAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGTaGCTTGGGATGGAGGTGACATTCCTTGCTGTGGTG +
Preference number: 3 (lower is better)
Translates to: QALLGFAFMRKW*LGMEVTFLAVV
Trigger: CACCACAGCAAGGAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp CCCCAACTAGATGGTATTGATCACTCTGCCCACAAATaGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTT +
Preference number: 3 (lower is better)
Translates to: PQLDGIDHSAHK*YPLQQELQALL
Trigger: AAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp GGTATGAAGCCCTCAGGGTCTGGTATCAAAGGTGGGTaGATTGCACCTTGGCCTCTTATGTCATTAGGAAAG +
Preference number: 3 (lower is better)
Translates to: GMKPSGSGIKGG*IAPWPLMSLGK
Trigger: CTTTCCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGAGGGCTTCATACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR GCA 72 bp AGGGATTTGGACGATGTACTTGACGCCACATCGACATaGTTTAGGCACAACGATGAACAAACGGCAGGAATC +
Preference number: 3 (lower is better)
Translates to: RDLDDVLDATST*FRHNDEQTAGI
Trigger: GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
3UTR CCA 72 bp TTAAATGTTTCCCTGTCCCCCTTCCCCAGGGTGGTTTaGTGTTGGTCCTTCTCAACACACACTGGTTACAAA +
Preference number: 3 (lower is better)
Translates to: LNVSLSPFPRVV*CWSFSTHTGYK
Trigger: TTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAAGGGGGACAGGGAAACATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp CCTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTaGGATGGAGGTGACATTCCTTGCTGTGGTGAACTG +
Preference number: 3 (lower is better)
Translates to: PSWICLHEKMVA*DGGDIPCCGEL
Trigger: CAGTTCACCACAGCAAGGAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATaGTCAATCCCTGTCTGTTACCCACAGGGACAGCAT +
Preference number: 3 (lower is better)
Translates to: NPTPPATCTTVR*SIPVCYPQGQH
Trigger: ATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR-3UTR CAA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAACCAAAGCACAAACTaGTCCTCTGTACGAAGCGAA +
Preference number: 3 (lower is better)
Translates to: VCSQKYKHHAVCASRAALNQSTN*SSVRSE
Trigger: TTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGTT...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR-3UTR CAA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGCTTCCCCAGGGTGGTTaGGTGTTGGTCCTTCTCAAC +
Preference number: 3 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKLPQGG*VLVLLN
Trigger: GTTGAGAAGGACCAACACCAAACCACCCTGGGGAAG...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CAA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAAACCAAAGCACAAACTaGTCCTCTGTACGAAGCGAA +
Preference number: 3 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQNQSTN*SSVRSE
Trigger: TTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGTT...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CAA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGCAGGGTGGTTTGGTGTaGGTCCTTCTCAACACACAC +
Preference number: 3 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKQGGLV*VLLNTH
Trigger: GTGTGTGTTGAGAAGGACCAACACCAAACCACCCTG...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR TCA 72 bp AAAAACTATTTCCCAGAAGGTAGCTGTACAGGAGTTTaGGTCTCCAGCTGCCAGGGCATTAGGTGTCTAGTC +
Preference number: 3 (lower is better)
Translates to: KNYFPEGSCTGV*VSSCQGIRCLV
Trigger: GACTAGACACCTAATGCCCTGGCAGCTGGAGACTCAAACTCCTGTACAGCTACCTTCTGGGAAATAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR CCA 72 bp TCAGGGTCTGGTATCAAAGGTGGGTGGATTGCACCTTaGCCTCTTATGTCATTAGGAAAGGGGTTTCATAAG +
Preference number: 3 (lower is better)
Translates to: SGSGIKGGWIAP*PLMSLGKGFHK
Trigger: CTTATGAAACCCCTTTCCTAATGACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGATACCAGACCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 72 bp TTCAGGGAAGAGGACCAGAATTTCTGCTCAATCTTATaGGGATGGCCCTTTGTTCCCAGAAATCCAAGCTCT +
Preference number: 3 (lower is better)
Translates to: FREEDQNFCSIL*GWPFVPRNPSS
Trigger: AGAGCTTGGATTTCTGGGAACAAAGGGCCATCCCCATAAGATTGAGCAGAAATTCTGGTCCTCTTCCCTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 72 bp ATAAAAATAGAAACGACATTCTTGGTTCCAGCCGGTTaGGATTCAGAACAGCGCCTCCCCAACCTAGCATTT +
Preference number: 3 (lower is better)
Translates to: IKIETTFLVPAG*DSEQRLPNLAF
Trigger: AAATGCTAGGTTGGGGAGGCGCTGTTCTGAATCCCAACCGGCTGGAACCAAGAATGTCGTTTCTATTTTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CCA 72 bp GCTAACAATGGACACAGGGAAAAGTCAAAAAGGACATaGAGGACACCAAGAACACATCTAATTGCCAGAGAC +
Preference number: 3 (lower is better)
Translates to: ANNGHREKSKRT*RTPRTHLIARD
Trigger: GTCTCTGGCAATTAGATGTGTTCTTGGTGTCCTCCATGTCCTTTTTGACTTTTCCCTGTGTCCATTGTTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR TCA 72 bp ACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATTGGAATCACAAAATCA +
Preference number: 3 (lower is better)
Translates to: TNTTRYVLVGLL*RQLQRIGITKS
Trigger: TGATTTTGTGATTCCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR CCA 72 bp CAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTaGTTACAAACACAGCAAACTTTAAATAAAGGAGAA +
Preference number: 3 (lower is better)
Translates to: QGGLVLVLLNTH*LQTQQTLNKGE
Trigger: TTCTCCTTTATTTAAAGTTTGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
3UTR-3UTR CAA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 3 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
3UTR CCA 72 bp CATACACAGCACCCTGTGTGTATAACAATCACATTCTaGATTCTACAAAATCCTGGCCTTTTCCAGAGATAT +
Preference number: 3 (lower is better)
Translates to: HTQHPVCITITF*ILQNPGLFQRY
Trigger: ATATCTCTGGAAAAGGCCAGGATTTTGTAGAATCCAGAATGTGATTGTTATACACACAGGGTGCTGTGTATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CAA 72 bp TCTGCCTGGCTGCCCTTTCCCCCAGGCAGAGCGGCCTaGGGCATAATACCAGGCAACCTGCCAGCCCCAGAG +
Preference number: 4 (lower is better)
Translates to: SAWLPFPPGRAA*GIIPGNLPAPE
Trigger: CTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAAGGCCGCTCTGCCTGGGGGAAAGGGCAGCCAGGCAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAGCCTCAGTTGCTGCCTaGGCCTCCGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPASVAA*ASAAAA
Trigger: GGCGGCGGCTGCGGAGGCGCAGGCAGCAACTGAGGC...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS-3UTR GCA 90 bp TGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCACAGAGGCGGCTCTGTaGAGTCAGACTGTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: WPPTGDWERPPSSRCSLPTEAAL*SQTVGC
Trigger: GCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGT...GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp AGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SLSASCQQRRLCAVRLWGGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...ACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCCTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WPPTGDWERPPSSRCSLPLICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACCTCCTACGGGTGATTaGGAGCGCCCTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSASCQQRRLCAVRLWGAPPTGD*ERPPSS
Trigger: GGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGG...TGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp TGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCAAGTCTCCAAGACCCTaGGGCTGGATGGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: WPPTGDWERPPSSRCSLPKSPRP*GWMVPQ
Trigger: TTGTGGCACCATCCAGCCTCAGGGTCTTGGAGACTT...GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGGCCAGCGGCTGCACCTaGGCCTGCCGCTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMASGCT*ACRCLS
Trigger: ACTGAGGCAGCGGCAGGCTCAGGTGCAGCCGCTGGC...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS-3UTR GCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGTGCCGCTGCCTCAGTTaGTGCCTGCGCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTCRCLS*CLRLRS
Trigger: GCTGCGGAGGCGCAGGCAGCAACTGAGGCAGCGGCA...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp TGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCCTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: WPPTGDWERPPSSRCSLPLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp CAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QRRLCAVRLWGAQQSLRLAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...CAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGGCTGCATTCAAGTGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RPWPLKGNPGDSGLAAFKCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...CTTGAATGCAGCCAGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CCCTCTCTGAGCAAAGCAGCCAGCCTCCCGGAAGCCCCGGTAAGACCTGGAGGCGAAGCCCTCAGGGTCTaGTATCAAAGGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PSLSKAASLPEAPVRPGGEALRV*YQRWVD
Trigger: ATCCACCCACCTTTGATACCAGACCCTGAGGGCTTC...GCCTCCAGGTCTTACCGGGGCTTCCGGGAGGCTGGCTGCTTTGCTCAGAGAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGCTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGGGAGCTCGTAATGGGTaGTGCCGCCCTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRGARNG*CRPAFC
Trigger: GCAAAAAGCAGGGCGGCATCACCCATTACGAGCTCC...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCCCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: EGSSRVFRASCARRPSHSPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GGGCCCAAAGTGCAGCCTGCGGTCAAAAAGGAAAGGGGGTTCAGGTGCTCTCCGCGCCAGCAGGTGAATTaGCGCTTGGTGTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: GPKVQPAVKKERGFRCSPRQQVN*RLVCRW
Trigger: CCATCTGCACACCAAGCGGCAATTCACCTGCTGGCG...CGGAGAGCACCTGAACCCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GGGCCCAAAGTGCAGCCTGCGGTCAAAAAGGAAAGGGGGTTCAGGTGCTCTCCGCTGTTTCTCCCAAACTaGCACCAGCCAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GPKVQPAVKKERGFRCSPLFLPN*HQPGKA
Trigger: GGCCTTGCCTGGCTGGTGGCAGTTTGGGAGAAACAG...CGGAGAGCACCTGAACCCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCCCGCCTTCATGAGAAAATaGTGGCTTGGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: WPPTGDWERPPSSRCSLPAFMRK*WLGMEV
Trigger: CACCTCCATCCCAAGCCACCATTTTCTCATGAAGGC...GGGCAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp AGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGTGGGCGGGCAGGGGTTaGGTAATGACAGGGAACTTT +
Preference number: 4 (lower is better)
Translates to: SASCQQRRLCAVRLWGAQWAGRG*VMTGNF
Trigger: AAAGTTCCCTGTCATTACCCAACCCCTGCCCGCCCA...CTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTGCCGTTCATTTTCTTTaGGCAGCGGCTGCACCTGAG +
Preference number: 4 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFAVHFL*AAAAPE
Trigger: CTCAGGTGCAGCCGCTGCTCAAAGAAAATGAACGGC...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR TCA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCAGGCCAATCCAATACTaGCTGCTGGCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: EGSSRVFRASCARRPSHSRPIQY*LLAGGA
Trigger: AGCTCCCCCAGCCAGCAGTCAGTATTGGATTGGCCT...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTTGCCGCTGCCTCAGTTaGTGCCTGCGCCTCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLACRCLS*CLRLRS
Trigger: GCTGCGGAGGCGCAGGCAGCAACTGAGGCAGCGGCA...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS-3UTR GCA 90 bp CAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGCTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: QRRLCAVRLWGAQQSLRLLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...CAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TTAGCTTCCATCCAGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTCCTGAGGCTGGATGGTaGCACAAGAGAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: LASIQALATQGEPRRQWSPEAGW*HKRGGS
Trigger: TGACCCTCCTCTCTTGTGGCACCATCCAGCCTCAGG...AGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCTGGATGGAAGCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CAGAGCGGCCTTGGGCATAATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCTCTGGTTGGTCTGGGTaGTCCAGGGTGCCGTTCATT +
Preference number: 4 (lower is better)
Translates to: QSGLGHNTRQPASPRAETSGWSG*SRVPFI
Trigger: AATGAACGGCACCCTGGACCACCCAGACCAACCAGA...GGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAAGGCCGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CAGAGCGGCCTTGGGCATAATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCAAGATCTGGTTGGTCTaGGTGGTCCAGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: QSGLGHNTRQPASPRAETKIWLV*VVQGAV
Trigger: AACGGCACCCTGGACCACCCAGACCAACCAGATCTT...GGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAAGGCCGCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTCGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCCTTGGGCAGGTTAGCTaGGCTGCAAACGGGCCACAG +
Preference number: 4 (lower is better)
Translates to: QKLCGSQARAEVRPARGGLGQVS*AANGPQ
Trigger: CTGTGGCCCGTTTGCAGCCCAGCTAACCTGCCCAAG...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAACAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAACCAAAGAGCCAACATTaGGGCCAGCCGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEPKSQH*GQPLLQ
Trigger: CTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGG...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR TCA 90 bp GTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 4 (lower is better)
Translates to: VPPANRGGSVQSDCGVHSFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...GCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCGGAGCTCGTAATGGGTaGTGCCGCCCTGCTTTTTGC +
Preference number: 4 (lower is better)
Translates to: QKLCGSQARAEVRPARGGGARNG*CRPAFC
Trigger: GCAAAAAGCAGGGCGGCATCACCCATTACGAGCTCC...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp AATCAAAGCATCACATTTTGCTGTGGAGACTGTTGGAACAAGCATGGGGCTGAGGCCTCAGTTGCTGCCTaGGCCTCCGCAGCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: NQSITFCCGDCWNKHGAEASVAA*ASAAAA
Trigger: GGCGGCGGCTGCGGAGGCGCAGGCAGCAACTGAGGC...CTCAGCCCCATGCTTGTTCCAACAGTCTCCACAGCAAAATGTGATGCTTTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCACTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPLICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AGATGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: RWPPTGDWERPPSSRCSLFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...CAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRNPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACTGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAAGAAAAAGGGCTGGCTaGGGCCCAAAGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPRKRAG*GPKCSL
Trigger: CAGGCTGCACTTTGGGCCCCAGCCAGCCCTTTTTCT...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCAGAGCCAGTGCCGGGTaGCTGGTGCCCAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: CPQMVPPSARTASPSWICRASAG*LVPRAV
Trigger: TACAGCCCTGGGCACCAGCCACCCGGCACTGGCTCT...GCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGGACCCTGAGGCTGGATaGTGCCACAAGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTDPEAG*CHKRGG
Trigger: CCCTCCTCTCTTGTGGCACCATCCAGCCTCAGGGTC...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CCA 90 bp CTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCATCCTCTCTCTTGGGGTaGTTTGGGGCAAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: LSASCQQRRLCAVRLWGASSLLG*FGANPD
Trigger: ATCAGGATTTGCCCCAAACCACCCCAAGAGAGAGGA...TGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGACAGCATGTCCTTCCTaGTTCTCTACCCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRTACPS*FSTPTA
Trigger: TGCTGTGGGGGTAGAGAACCAGGAAGGACATGCTGT...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCGAACCCAGGAGACAGTaGTCTGGCTGCATTCAAGGC +
Preference number: 4 (lower is better)
Translates to: HLGKAPAGELPLGVQMASEPRRQ*SGCIQG
Trigger: GCCTTGAATGCAGCCAGACCACTGTCTCCTGGGTTC...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGGGAACCTAAGGCTTaGATTTTCCATGAAGCACCC +
Preference number: 4 (lower is better)
Translates to: VPPANRGGSVQSDCGVHSREPKA*IFHEAP
Trigger: GGGTGCTTCATGGAAAATCCAAGCCTTAGGTTCCCT...GCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAAGCAGCGGCTGCACCTaGGCCTGCCGCTGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LTPHRHALGTTMNKRQESSSGCT*ACRCLS
Trigger: ACTGAGGCAGCGGCAGGCTCAGGTGCAGCCGCTGCT...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR TCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLAGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGCCAAAGAGCCAACATTaGGGCCAGCCGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTPKSQH*GQPLLQ
Trigger: CTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGG...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR TCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAACTGGCCACTGGCAAATaGAGCATACTGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPELATGK*SILACR
Trigger: CCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAG...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCCCAGAGCAGAAACCCTaGTGGGATCCCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: HLGKAPAGELPLGVQMASPEQKP*WDPFLH
Trigger: ATGAAGGAAGGGATCCCAGCAGGGTTTCTGCTCTGG...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGTCTGGTTGGTCTGGGTaGTCCAGGGTGCCGTTCATT +
Preference number: 4 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRSGWSG*SRVPFI
Trigger: AATGAACGGCACCCTGGACCACCCAGACCAACCAGA...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AGATGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: RWPPTGDWERPPSSRCSLQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...CAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGTGCTGCATCTGCTGCTaGAGCTGCTGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTCCICC*SCWAIL
Trigger: GAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCA...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGTGCTGCATCTGCTGCTaGAGCTGCTGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLCCICC*SCWAIL
Trigger: GAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCA...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: QKLCGSQARAEVRPARGGSGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGCAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp AGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGGCTGCATTCAAGAAAAACTGGCTTGCTTaGCACCCAGGGACAGTAGCT +
Preference number: 4 (lower is better)
Translates to: RPWPLKGNPGDSGLAAFKKNWLA*HPGTVA
Trigger: AGCTACTGTCCCTGGGTGCCAAGCAAGCCAGTTTTT...CTTGAATGCAGCCAGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp ACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAACACTGGGCCTCTGCCTaGCTGCCCTTTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: TPHRHALGTTMNKRQESEHWASA*LPFPPG
Trigger: GCCTGGGGGAAAGGGCAGCCAGGCAGAGGCCCAGTG...TTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCATGTGCAGTCAGACTGTaGGGTGCACAGCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPCAVRL*GAQQSL
Trigger: GAGAGACTGCTGTGCACCCCACAGTCTGACTGCACA...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GGGCCCAAAGTGCAGCCTGCGGTCAAAAAGGAAAGGGGGTTCAGGTGCTCTCCGTTCCCCAGGGTGGTTTaGTGTTGGTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: GPKVQPAVKKERGFRCSPFPRVV*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA...CGGAGAGCACCTGAACCCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCCTCAGTCCTCTCTCTTaGGGTGGTTTGGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: EGSSRVFRASCARRPSHSLSPLS*GGLGQI
Trigger: GATTTGCCCCAAACCACCCCAAGAGAGAGGACTGAG...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCACAGCATGTCCTTCCTaGTTCTCTACCCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: EGSSRVFRASCARRPSHSTACPS*FSTPTA
Trigger: TGCTGTGGGGGTAGAGAACCAGGAAGGACATGCTGT...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTCCCATCCCTGGCTGTaGCTACAGTCACATCTTAAC +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRSHPWL*LQSHLN
Trigger: GTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGA...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQEGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCCAAAGAGCCAACATTaGGGCCAGCCGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFPKSQH*GQPLLQ
Trigger: CTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGG...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLAGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp AGATGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: RWPPTGDWERPPSSRCSLTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...CAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGGCCTCCTACGGGTaGTTGGGAGCGCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTMASYG*LGAPSF
Trigger: GAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCAT...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAGTCACAGGCAAGAGCTaGAGTAAGACCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPVTGKS*SKTCKR
Trigger: CCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGAC...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCACCCTCCATGGTCTGTaGTTGGTGCATTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HLGKAPAGELPLGVQMASTLHGL*LVHCLD
Trigger: ATCAAGGCAATGCACCAAGCACAGACCATGGAGGGT...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGCCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CAGAGCGGCCTTGGGCATAATACCAGGCAACCTGCCAGCCCCAGAGCAGAAACCAGAAAGAACAATACATaGGGTCTCCTCAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: QSGLGHNTRQPASPRAETRKNNT*GLLKPH
Trigger: GTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCT...GGTTTCTGCTCTGGGGCTGGCAGGTTGCCTGGTATTATGCCCAAGGCCGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCGTGATGAAGAGCCAGTaGCGGGTGGCTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGIVMKSQ*RVAGAQ
Trigger: CTGGGCACCAGCCACCCGGCACTGGCTCTTCATCAC...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGAGCCTCAGTGCCTCCTaGCAACAGAGGCGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWSLSAS*QQRRLC
Trigger: ACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp GGCAGGTTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTAGTTTCAATCATAGTCTCACCAGCTGGCTaGTCAAGCAGCCCAGGACCC +
Preference number: 4 (lower is better)
Translates to: GRLAGLQTGHRKSVVSIIVSPAG*SSSPGP
Trigger: GGGTCCTGGGCTGCTTGAGCAGCCAGCTGGTGAGAC...TATGATTGAAACTACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAACCTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp AGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGAGGACCAGAATTTCTaGTCAATCTTATGGGGATGG +
Preference number: 4 (lower is better)
Translates to: SLSASCQQRRLCAVRLWGEDQNF*SILWGW
Trigger: CCATCCCCATAAGATTGAGCAGAAATTCTGGTCCTC...ACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACAAGATCTGGTTGGTCTaGGTGGTCCAGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHKIWLV*VVQGAV
Trigger: AACGGCACCCTGGACCACCCAGACCAACCAGATCTT...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGAAGATCTGGTTGGTCTaGGTGGTCCAGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTKIWLV*VVQGAV
Trigger: AACGGCACCCTGGACCACCCAGACCAACCAGATCTT...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPNPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGCCTACCAGACACTaGGCCTCTGCCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRQPTRH*ASAWLP
Trigger: GGGCAGCCAGGCAGAGGCCCAGTGTCTGGTAGGCTG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAATCCAATACTGACTGCTaGCTGGGGGAGCTCGTAATG +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPESNTDC*LGELVM
Trigger: CATTACGAGCTCCCCCAGCCAGCAGTCAGTATTGGA...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCCTTCCATCCAGGCCCTaGCCACTCAAGGGGAACCCA +
Preference number: 4 (lower is better)
Translates to: CPQMVPPSARTASPSWICLPSRP*PLKGNP
Trigger: TGGGTTCCCCTTGAGTGGCCAGGGCCTGGATGGAAG...GCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTCAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLAQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAATTCATCTGTATAGGGTaGTGCATCCCTGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEFICIG*CIPGRT
Trigger: AGTCCTCCCAGGGATGCATCACCCTATACAGATGAA...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTCCAAAGAGCCAACATTaGGGCCAGCCGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLAPKSQH*GQPLLQ
Trigger: CTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGG...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACCAAAACAGCACCCTTTaGTCTGAGGCGGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHQNSTL*SEAGFG
Trigger: GCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTG...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAACCCTCCATGGTCTGTaGTTGGTGCATTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPETLHGL*LVHCLD
Trigger: ATCAAGGCAATGCACCAAGCACAGACCATGGAGGGT...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACTCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCGGCTGGGGCCCAAAGTaGAGCCTGCGGTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLGWGPK*SLRSKR
Trigger: CCTTTTTGACCGCAGGCTGCACTTTGGGCCCCAGCC...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGCCTCAGTGCCTCCTaGCAACAGAGGCGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRSLSAS*QQRRLC
Trigger: ACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGGGGAGCCTCAGTaGCTCCTGCCAACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: LTPHRHALGTTMNKRQESEGEPQ*LLPTEA
Trigger: CGCCTCTGTTGGCAGGAGGCACTGAGGCTCCCCTTC...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCATGCCGCCCTGCTTTTTaGATATGTCAGGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPCRPAF*ICQANR
Trigger: CCTGTTAGCCTGACATATGCAAAAAGCAGGGCGGCA...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TTCCCCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCAGCCCAGGACCCTaGTGGGGCGAGCATTCCTTT +
Preference number: 4 (lower is better)
Translates to: FPRVVWCWSFSTHTGYKHSSPGP*WGEHSF
Trigger: AAAGGAATGCTCGCCCCAGCAGGGTCCTGGGCTGCT...GTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEDSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: HLGKAPAGELPLGVQMASQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACTGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GGGCCCAAAGTGCAGCCTGCGGTCAAAAAGGAAAGGGGGTTCAGGTGCTCTCCGAGCCTAGAAACGGACTaGCTGTGTGTTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: GPKVQPAVKKERGFRCSPSLETD*LCVHRN
Trigger: ATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCT...CGGAGAGCACCTGAACCCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCGACCCTGAGGCTGGATaGTGCCACAAGAGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGDPEAG*CHKRGG
Trigger: CCCTCCTCTCTTGTGGCACCATCCAGCCTCAGGGTC...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCACCGGCAGCACCCTATaGAGCACAGCTCTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: CPQMVPPSARTASPSWICTGSTL*STALSS
Trigger: AGAGGAGAGAGCTGTGCTCCATAGGGTGCTGCCGGT...GCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACCACATGGTCTCACCAGCTaGCTGCTCAAGCAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: GNQKGSCRSRVSNPLKPPHGLTS*LLKQPR
Trigger: CCTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATG...TGGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACCAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGCAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGTTCATCTGTATAGGGTaGTGCATCCCTGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLFICIG*CIPGRT
Trigger: AGTCCTCCCAGGGATGCATCACCCTATACAGATGAA...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAAGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: DLDDVLDATSTCFRHNDEGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTAGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACCTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACACTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCCCAAAGAGCCAACATTaGGGCCAGCCGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLPKSQH*GQPLLQ
Trigger: CTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGG...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: HHAVCASRAALKTITKNWGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACCTTCCCACCCTCTCTaGGCAAAGCAGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKPSHPL*AKQPAS
Trigger: GGAGGCTGGCTGCTTTGCTCAGAGAGGGTGGGAAGG...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGATGGCCTCCTACGGGTaGTTGGGAGCGCCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKMASYG*LGAPSF
Trigger: GAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCAT...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp TCTGGCCACTGGCAAATGAAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGTAGGCCAATCCAATACTaGCTGCTGGCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SGHWQMKHTGLQGPSDSSRPIQY*LLAGGA
Trigger: AGCTCCCCCAGCCAGCAGTCAGTATTGGATTGGCCT...ACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGCTTGCTGCACTTGTCTaGTCCACAAATACACACAGC +
Preference number: 4 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRLAALV*STNTHS
Trigger: GCTGTGTGTATTTGTGGATCAGACAAGTGCAGCAAG...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS-3UTR GCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGCAAAACAGCACCCTTTaGTCTGAGGCGGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMQNSTL*SEAGFG
Trigger: GCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTG...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGACTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRLICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCACCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: LTPHRHALGTTMNKRQESPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACCCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAGGCTGGGGCCCAAAGTaGAGCCTGCGGTCAAAAAGG +
Preference number: 4 (lower is better)
Translates to: YLTPHRHALGTTMNKRQEGWGPK*SLRSKR
Trigger: CCTTTTTGACCGCAGGCTGCACTTTGGGCCCCAGCC...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TTCCCCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACCCTCCTTCCTCCAGGTaGTCACTGCCCCTAATGTGC +
Preference number: 4 (lower is better)
Translates to: FPRVVWCWSFSTHTGYKHPPSSR*SLPLMC
Trigger: GCACATTAGGGGCAGTGAGCACCTGGAGGAAGGAGG...GTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAAGTGATGAAGAGCCAGTaGCGGGTGGCTGGTGCCCAG +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKVMKSQ*RVAGAQ
Trigger: CTGGGCACCAGCCACCCGGCACTGGCTCTTCATCAC...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGCCTGAGGCTGGATGGTaGCACAAGAGAGGAGGGTCA +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALPEAGW*HKRGGS
Trigger: TGACCCTCCTCTCTTGTGGCACCATCCAGCCTCAGG...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp AGGCCCTGGCCACTCAAGGGGAACCCAGGAGACAGTGGTCTGGCTGCATTCAAGAGCCCTTCTTGGATTTaGCTTCATGAGAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: RPWPLKGNPGDSGLAAFKSPSWI*LHEKMV
Trigger: CACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCT...CTTGAATGCAGCCAGACCACTGTCTCCTGGGTTCCCCTTGAGTGGCCAGGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGGTTACAGGAGGGGCCTaGCAGACCCCTGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQEVTGGA*QTPVGI
Trigger: TATTCCCACAGGGGTCTGGCAGGCCCCTCCTGTAAC...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACTCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGTGCTGCATCTGCTGCTaGAGCTGCTGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTCCICC*SCWAIL
Trigger: GAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCA...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTTGCTGCATCTGCTGCTaGAGCTGCTGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPCCICC*SCWAIL
Trigger: GAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCA...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACCAAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: GNQKGSCRSRVSNPLKPPNPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...TGGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGNPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGINPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ATCACTCTGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: ITLPTNGTPFSKNCKPFLDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...CAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAACCTCCTACGGGTGATTaGGAGCGCCCTCCTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQPPTGD*ERPPSS
Trigger: GGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGG...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACGCTTGGTGTGCAGATaGCCTCCTACGGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGRLVCR*PPTGDW
Trigger: CCAATCACCCGTAGGAGGCCATCTGCACACCAAGCG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TCTGGCCACTGGCAAATGAAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGTCGCTTGGTGTGCAGATaGCCTCCTACGGGTGATTGG +
Preference number: 4 (lower is better)
Translates to: SGHWQMKHTGLQGPSDSSRLVCR*PPTGDW
Trigger: CCAATCACCCGTAGGAGGCCATCTGCACACCAAGCG...ACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCACACTGGGCCTCTGCCTaGCTGCCCTTTCCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPHWASA*LPFPPG
Trigger: GCCTGGGGGAAAGGGCAGCCAGGCAGAGGCCCAGTG...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCAGCAGTCTCTCAGGCTaGGGTTTCTGGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTSSLSG*GFWPLS
Trigger: GGAAAGAGGCCAGAAACCCCAGCCTGAGAGACTGCT...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGCTGTCCCAGCTTCAATaGGATAATCCAACACCACCA +
Preference number: 4 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRLSQLQ*DNPTPP
Trigger: TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAG...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTGGCTGCTCAAGCAGCCCAGTTCTGCTCAATCTTATaGGGATGGCCCTTTGTTCCC +
Preference number: 4 (lower is better)
Translates to: RREQRSAWSHQLAAQAAQFCSIL*GWPFVP
Trigger: GGGAACAAAGGGCCATCCCCATAAGATTGAGCAGAA...CTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CACCTAGGAAAAGCGCCAGCAGGTGAATTGCCGCTTGGTGTGCAGATGGCCTCCTATCCCTTAGGACGTTaGTTTCATACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: HLGKAPAGELPLGVQMASYPLGR*FHTQHH
Trigger: ATGGTGCTGTGTATGAAATCAACGTCCTAAGGGATA...GGAGGCCATCTGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTTCCTAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp GAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTACAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: ETDWLCVHRNTNTTRYVLQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...TAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGCAGCACCCTTTGCTCTaGGGCGGGTTTTGGCTCCTA +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTQHPLL*GGFWLL
Trigger: TAGGAGCCAAAACCCGCCTCAGAGCAAAGGGTGCTG...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTACTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGCTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGCCAAAGAGCCAACATTaGGGCCAGCCGTTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTPKSQH*GQPLLQ
Trigger: CTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGG...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGTTGTCTGCTTGTCTATaGAAACCTTGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRLSACL*KPWQTR
Trigger: TCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAA...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGCTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATT +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRLVGLL*RQLQRI
Trigger: AATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAG...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACGGAGGCCACACGAAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHGGHTK*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTTCGTGTGGCCTCC...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR TCA 90 bp GAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGGAGGCCACACGAAGTaGCAGTCTAAGTGCACAGGC +
Preference number: 4 (lower is better)
Translates to: ETDWLCVHRNTNTTRYVLGGHTK*QSKCTG
Trigger: GCCTGTGCACTTAGACTGTCACTTCGTGTGGCCTCC...TAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp AGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTGGCTGCTCAAGCAGCCCAGCCAACTAGATGGTATTaGTCACTCTGCCCACAAATG +
Preference number: 4 (lower is better)
Translates to: RREQRSAWSHQLAAQAAQPTRWY*SLCPQM
Trigger: CATTTGTGGGCAGAGTGATCAATACCATCTAGTTGG...CTGGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAGAGAGAGCCCCCATCTaGCTTAATAGCAAACCAACC +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPERAPI*LNSKPT
Trigger: GGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTC...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp AATCAAAGCATCACATTTTGCTGTGGAGACTGTTGGAACAAGCATGGGGCTGAGCTGTGTGTACAGCCCTaGAATGAGGTGGGCGGGCAG +
Preference number: 4 (lower is better)
Translates to: NQSITFCCGDCWNKHGAELCVQP*NEVGGQ
Trigger: CTGCCCGCCCACCTCATTTCAGGGCTGTACACACAG...CTCAGCCCCATGCTTGTTCCAACAGTCTCCACAGCAAAATGTGATGCTTTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCACCCTCCATGGTCTGTaGTTGGTGCATTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFTLHGL*LVHCLD
Trigger: ATCAAGGCAATGCACCAAGCACAGACCATGGAGGGT...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCCTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPLICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAACTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: YLTPHRHALGTTMNKRQELICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSLICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGTCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGAGAAAGAACAATACATaGGGTCTCCTCAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLRKNNT*GLLKPH
Trigger: GTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCT...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGAGCCTCTTACCCACCTaGTGCCACCTTCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQESLLPT*CHLLGS
Trigger: AGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCT...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACAGAGGCGGCTCTGTaGAGTCAGACTGTGGGGTGC +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQTEAAL*SQTVGC
Trigger: GCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGT...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGCTTGCTGTGGTGAACTaGAAAGAAGGAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLLAVVN*KEGNQA
Trigger: TGCCTGGTTTCCTTCTTTGCAGTTCACCACAGCAAG...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GGCAGGTTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTAGTTTCAATCATACAAGGGCAGTGCTACTaGTGTGCTAACTCACTGGGC +
Preference number: 4 (lower is better)
Translates to: GRLAGLQTGHRKSVVSIIQGQCY*CANSLG
Trigger: GCCCAGTGAGTTAGCACAGCAGTAGCACTGCCCTTG...TATGATTGAAACTACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAACCTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCTCTGGTTGGTCTGGGTaGTCCAGGGTGCCGTTCATT +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGISGWSG*SRVPFI
Trigger: AATGAACGGCACCCTGGACCACCCAGACCAACCAGA...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGATCTGGTTGGTCTGGGTaGTCCAGGGTGCCGTTCATT +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRSGWSG*SRVPFI
Trigger: AATGAACGGCACCCTGGACCACCCAGACCAACCAGA...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCAAGATCTGGTTGGTCTaGGTGGTCCAGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGKIWLV*VVQGAV
Trigger: AACGGCACCCTGGACCACCCAGACCAACCAGATCTT...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGAAGATCTGGTTGGTCTaGGTGGTCCAGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: LQALLGFAFMRKWWLGMEKIWLV*VVQGAV
Trigger: AACGGCACCCTGGACCACCCAGACCAACCAGATCTT...CTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCAAGATCTGGTTGGTCTaGGTGGTCCAGGGTGCCGTT +
Preference number: 4 (lower is better)
Translates to: RKEQLSQLQWDNPTPPATKIWLV*VVQGAV
Trigger: AACGGCACCCTGGACCACCCAGACCAACCAGATCTT...GGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACGCATCAAGATCTGGTTaGTCTGGGTGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHASRSG*SGWSRV
Trigger: CACCCTGGACCACCCAGACCAACCAGATCTTGATGC...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCGCATCAAGATCTGGTTaGTCTGGGTGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLASRSG*SGWSRV
Trigger: CACCCTGGACCACCCAGACCAACCAGATCTTGATGC...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTGCTGCATCTGCTGCTaGAGCTGCTGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPCCICC*SCWAIL
Trigger: GAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCA...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHNPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp CAGTCTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QSKCTGKRSKGNRGESCHIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...GTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAGACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCAGATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SIHVEAVNVLMSPLPQEQIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...CTGCTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGTGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALSGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGTGTGTCAGAAGATTCTaGTTGTACAGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTCVRRF*LYRVGS
Trigger: GCTCCCCACTCTGTACAACCAGAATCTTCTGACACA...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCCAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGCAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGACGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCCTCTCCACCCTTCCCTaGACAGTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPLSTLP*TVLLPS
Trigger: GCTGGGAAGTAGGACTGTCCAGGGAAGGGTGGAGAG...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGTGTGCAGTCAGACTGTaGGGTGCACAGCAGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTCAVRL*GAQQSL
Trigger: GAGAGACTGCTGTGCACCCCACAGTCTGACTGCACA...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCTCCTCTCTCTTGGGGTaGTTTGGGGCAAATCCTGAT +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFSSLLG*FGANPD
Trigger: ATCAGGATTTGCCCCAAACCACCCCAAGAGAGAGGA...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCACTGCAAGCCCTTCTTaGATTTGCCTTCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: EGSSRVFRASCARRPSHSTASPS*ICLHEK
Trigger: TTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGT...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCACACTCTGCCCACAAATaGTACCCCCTTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPHSAHK*YPLQQE
Trigger: TTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTG...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGCAGGGATCCCATCCCTaGCTGTGGCTACAGTCACAT +
Preference number: 4 (lower is better)
Translates to: LQALLGFAFMRKWWLGMEQGSHP*LWLQSH
Trigger: ATGTGACTGTAGCCACAGCCAGGGATGGGATCCCTG...CTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TTCCCCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACCAGGGATCCCATCCCTaGCTGTGGCTACAGTCACAT +
Preference number: 4 (lower is better)
Translates to: FPRVVWCWSFSTHTGYKHQGSHP*LWLQSH
Trigger: ATGTGACTGTAGCCACAGCCAGGGATGGGATCCCTG...GTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCTTGGTTCCAGCCGGTTaGGATTCAGAACAGCGCCTC +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGLVPAG*DSEQRL
Trigger: GAGGCGCTGTTCTGAATCCCAACCGGCTGGAACCAA...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGAGAAGAAGGGGATGTaGGAAGGGAGTGGCGTTCTG +
Preference number: 4 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPEKKGM*EGSGVL
Trigger: CAGAACGCCACTCCCTTCCCACATCCCCTTCTTCTC...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGCAGTTACAAATAGTATaGGCAGAGAACTGTCTCATC +
Preference number: 4 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRQLQIV*AENCLI
Trigger: GATGAGACAGTTCTCTGCCCATACTATTTGTAACTG...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR TCA 90 bp GGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACCAGAGGAGGCAGTCTGCTaGAGGAGTGCTAAATACTGG +
Preference number: 4 (lower is better)
Translates to: GNQKGSCRSRVSNPLKPPEEAVC*RSAKYW
Trigger: CCAGTATTTAGCACTCCTTCAGCAGACTGCCTCCTC...TGGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR TCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAGAGGAGGCAGTCTGCTaGAGGAGTGCTAAATACTGG +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIREEAVC*RSAKYW
Trigger: CCAGTATTTAGCACTCCTTCAGCAGACTGCCTCCTC...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000361904.7
ENST00000395292.6
CDS-3UTR TCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACGAGGAGGCAGTCTGCTaGAGGAGTGCTAAATACTGG +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHEEAVC*RSAKYW
Trigger: CCAGTATTTAGCACTCCTTCAGCAGACTGCCTCCTC...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000361904.7
ENST00000395292.6
CDS-3UTR TCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTCTGCAGGGCTCCAAGTaGGGCTATGGGGTTGACAGA +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCLQGSK*GYGVDR
Trigger: TCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAG...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp AAACAAAGCCTAGAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: KQSLETDWLCVHRNTNTTGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...CGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCTTTGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp ATGACAAGGAGAGAGCCCCCATCTGACTTAATAGCAAACCAACCCCTTTATTCTGGGGCAGGTGGTAGATaGACAGGTTGGCTCCCTCTG +
Preference number: 4 (lower is better)
Translates to: MTRREPPSDLIANQPLYSGAGGR*TGWLPL
Trigger: CAGAGGGAGCCAACCTGTTCATCTACCACCTGCCCC...AGAATAAAGGGGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTCCTTGTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCAAAAGCGCCAGCAGGTaGATTGCCGCTTGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPKSASR*IAAWCA
Trigger: TGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTT...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR TCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGAAAAGCGCCAGCAGGTaGATTGCCGCTTGGTGTGCA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRKSASR*IAAWCA
Trigger: TGCACACCAAGCGGCAATTCACCTGCTGGCGCTTTT...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp CTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACTTCAAAGTCTCCAAGACCCTaGGGCTGGATGGTGCCACAA +
Preference number: 4 (lower is better)
Translates to: LSAQANALRAIEEKVATSKSPRP*GWMVPQ
Trigger: TTGTGGCACCATCCAGCCTCAGGGTCTTGGAGACTT...TGAAGTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAGTTTGGGGCAAATCCTaGTCATCGTCTGTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPVWGKS*SSSVLN
Trigger: ATTTAACACAGACGATGATCAGGATTTGCCCCAAAC...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp ATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAGCTGTACAGGAGTTTaGGTCTCCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: IWTMYLTPHRHALGTTMNSCTGV*VSSCQG
Trigger: GCCCTGGCAGCTGGAGACTCAAACTCCTGTACAGCT...GTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CCTGAAATGAGGTGGGCGGGCAGGGGTTGGGTAATGACAGGGAACTTTTGCACACTTGCAGGGACCTTCTaGTTCAAGTACACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: PEMRWAGRGWVMTGNFCTLAGTF*FKYTKK
Trigger: TTTCTTGGTGTACTTGAATCAGAAGGTCCCTGCAAG...TGTGCAAAAGTTCCCTGTCATTACCCAACCCCTGCCCGCCCACCTCATTTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGGTCTCCACTCTGAGCTaGGCCCTTTCACACGTGAGA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRVSTLS*ALSHVR
Trigger: TCTCACGTGTGAAAGGGCTCAGCTCAGAGTGGAGAC...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCTCATCCCCACTCAGCTaGCAAGTTCTATTCCCAACA +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFSSPLS*QVLFPT
Trigger: TGTTGGGAATAGAACTTGTCAGCTGAGTGGGGATGA...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACCAAAACAGCACCCTTTaGTCTGAGGCGGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNQNSTL*SEAGFG
Trigger: GCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTG...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACAAAACAGCACCCTTTaGTCTGAGGCGGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGQNSTL*SEAGFG
Trigger: GCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACCTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHLDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGCTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGCTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCAATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PGWFGVGPSQHTLVTNTAICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...TGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACATCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ETDWLCVHRNTNTTRYVLAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...TAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGAGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp CCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: PPSARTASPSWICLHEKMAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...CATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTCCCCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: FPRVVWCWSFSTHTGYKHHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...GTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGTTCGAACGTTTGAGCTaGACTTTAAGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLFERLS*TLSRFM
Trigger: CATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAA...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGAGCCCAAAGTGCAGCCTaGGGTCAAAAAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRAQSAA*GQKGKG
Trigger: CCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGC...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp CTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACTTCAAGCCTCTTACCCACCTaGTGCCACCTTCTAGGCTCT +
Preference number: 4 (lower is better)
Translates to: LSAQANALRAIEEKVATSSLLPT*CHLLGS
Trigger: AGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCT...TGAAGTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACCTCCTTCCTCCAGGTaGTCACTGCCCCTAATGTGC +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKPPSSR*SLPLMC
Trigger: GCACATTAGGGGCAGTGAGCACCTGGAGGAAGGAGG...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACCACCTTGGTGTGGAGGATaGTCAATAGCGCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: GNQKGSCRSRVSNPLKPPPWCGG*SIALPP
Trigger: AGGTGGAAGCGCTATTGAGCATCCTCCACACCAAGG...TGGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCAGTCAGACTGTGGGGTaGACAGCAGTCTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPSQTVG*TAVSQA
Trigger: AGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACT...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp CACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGAAGGGGAGCCTCAGTaGCTCCTGCCAACAGAGGCG +
Preference number: 4 (lower is better)
Translates to: HISPSAQNFKFTWFSLRSEGEPQ*LLPTEA
Trigger: CGCCTCTGTTGGCAGGAGGCACTGAGGCTCCCCTTC...ACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CCCCAACTAGATGGTATTGATCACTCTGCCCACAAATGGTACCCCCTTCAGCAACAATCCAATACTGACTaGTGGCTGGGGGAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: PQLDGIDHSAHKWYPLQQQSNTD*WLGELV
Trigger: TACGAGCTCCCCCAGCCAGCAGTCAGTATTGGATTG...TTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACTGTTTCTCCCAAACTaGCACCAGCCAGGCAAGGCC +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLLFLPN*HQPGKA
Trigger: GGCCTTGCCTGGCTGGTGGCAGTTTGGGAGAAACAG...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCCCTTCAGCAAGAACTaGAAGCCCTTCTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFPFSKN*KPFLDL
Trigger: CAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGG...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAGTTACAGGAGGGGCCTaGCAGACCCCTGTGGGAATA +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQVTGGA*QTPVGI
Trigger: TATTCCCACAGGGGTCTGGCAGGCCCCTCCTGTAAC...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp TCTGGCCACTGGCAAATGAAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGTGAGAGAACAGAGAAGTaGATGGTCTCACCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SGHWQMKHTGLQGPSDSSERTEK*MVSPAG
Trigger: GCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTC...ACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGCATCAAGATCTGGTTaGTCTGGGTGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQASRSG*SGWSRV
Trigger: CACCCTGGACCACCCAGACCAACCAGATCTTGATGC...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLADSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCTCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: CPQMVPPSARTASPSWICSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...GCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLAMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGCAAATTTTACCACCATaGGTGATGAGCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTQILPP*VMSNPP
Trigger: TGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTG...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRSGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAATCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TPHRHALGTTMNKRQESESGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...TTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCTGTGTCAGAAGATTCTaGTTGTACAGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFCVRRF*LYRVGS
Trigger: GCTCCCCACTCTGTACAACCAGAATCTTCTGACACA...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTCAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: YLTPHRHALGTTMNKRQEDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGACTGGATGGCAGCTTaGGCCGAAACAGGATTGTCG +
Preference number: 4 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKDWMAA*AETGLS
Trigger: CGACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTC...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAGAAAAAGGGCTGGCTaGGGCCCAAAGTGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: IWTMYLTPHRHALGTTMNRKRAG*GPKCSL
Trigger: CAGGCTGCACTTTGGGCCCCAGCCAGCCCTTTTTCT...GTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CAAAAGAAAGAACAATACATGCGGTCTCCTCAAGCCCCACAGACTGTATCAGCACTCTCCACCCTTCCCTaGACAGTCCTACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: QKKEQYMRSPQAPQTVSALSTLP*TVLLPS
Trigger: GCTGGGAAGTAGGACTGTCCAGGGAAGGGTGGAGAG...TGCTGATACAGTCTGTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCTTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GGGCCCAAAGTGCAGCCTGCGGTCAAAAAGGAAAGGGGGTTCAGGTGCTCTCCGCCAACATTTGGCATTTaGTTTTATCCACAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: GPKVQPAVKKERGFRCSPPTFGI*FYPQVF
Trigger: GAAAACCTGTGGATAAAACCAAATGCCAAATGTTGG...CGGAGAGCACCTGAACCCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAAGGGTGGTTTGGTGTTaGTCCTTCTCAACACACACT +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPRVVWC*SFSTHT
Trigger: AGTGTGTGTTGAGAAGGACCAACACCAAACCACCCT...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCTTCCCCAGGGTGGTTTaGTGTTGGTCCTTCTCAACA +
Preference number: 4 (lower is better)
Translates to: CPQMVPPSARTASPSWICFPRVV*CWSFST
Trigger: TGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA...GCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCAGTCCAATACTGACTGCTaGCTGGGGGAGCTCGTAATG +
Preference number: 4 (lower is better)
Translates to: SIHVEAVNVLMSPLPQEQSNTDC*LGELVM
Trigger: CATTACGAGCTCCCCCAGCCAGCAGTCAGTATTGGA...CTGCTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCAGACAGCATGTCCTTCCTaGTTCTCTACCCCCACAGCA +
Preference number: 4 (lower is better)
Translates to: SIHVEAVNVLMSPLPQEQTACPS*FSTPTA
Trigger: TGCTGTGGGGGTAGAGAACCAGGAAGGACATGCTGT...CTGCTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGTCCCATCCCTGGCTGTaGCTACAGTCACATCTTAAC +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWSHPWL*LQSHLN
Trigger: GTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGA...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ATCACTCTGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGGTATCAAAGGTGGGTaGATTGCACCTTGGCCTCTT +
Preference number: 4 (lower is better)
Translates to: ITLPTNGTPFSKNCKPFLGIKGG*IAPWPL
Trigger: AAGAGGCCAAGGTGCAATCCACCCACCTTTGATACC...CAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGTTCATCTGTATAGGGTaGTGCATCCCTGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALFICIG*CIPGRT
Trigger: AGTCCTCCCAGGGATGCATCACCCTATACAGATGAA...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCCTTCCCACCCTCTCTaGGCAAAGCAGCCAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFPSHPL*AKQPAS
Trigger: GGAGGCTGGCTGCTTTGCTCAGAGAGGGTGGGAAGG...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCACCAACTAGATGGTATTaGTCACTCTGCCCACAAATG +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPPTRWY*SLCPQM
Trigger: CATTTGTGGGCAGAGTGATCAATACCATCTAGTTGG...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCAAGAGCAGAAAATGTaGCTGGAGTGGTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGQEQKM*LEWLQE
Trigger: CTCCTGTAACCACTCCAGTCACATTTTCTGCTCTTG...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGTCACAGGCAAGAGCTaGAGTAAGACCTGCAAGAGG +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQVTGKS*SKTCKR
Trigger: CCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGAC...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGCCCAAGTTATCACTATaGGAAAGGAACAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGPKLSL*ERNSCP
Trigger: GGGACAGCTGTTCCTTTCTCATAGTGATAACTTGGG...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTTGTACAGCCCTGAAATaGGGTGGGCGGGCAGGGGTT +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCCTALK*GGRAGV
Trigger: AACCCCTGCCCGCCCACCTCATTTCAGGGCTGTACA...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTCTTGCTGCACTTGTCTaGTCCACAAATACACACAGC +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLALAALV*STNTHS
Trigger: GCTGTGTGTATTTGTGGATCAGACAAGTGCAGCAAG...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGAACACTGCATGCTTATaGCTCATGAGGGGATGGGGG +
Preference number: 4 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKNTACL*LMRGWG
Trigger: CCCCCATCCCCTCATGAGTCATAAGCATGCAGTGTT...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCTGGGTGGTCCAGGGTaGCGTTCATTTTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRLGGPG*RSFSLS
Trigger: GCTCAAAGAAAATGAACGGCACCCTGGACCACCCAG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTTGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLACKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGIMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCACCCTCCATGGTCTGTaGTTGGTGCATTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSTLHGL*LVHCLD
Trigger: ATCAAGGCAATGCACCAAGCACAGACCATGGAGGGT...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: ETDWLCVHRNTNTTRYVLICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...TAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTATCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ETDWLCVHRNTNTTRYVLSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...TAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QKYKHHAVCASRAALKTIAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp TTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTAGTTTCAATCATACACAGCCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: LAGLQTGHRKSVVSIIHSHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...GCTGTGTATGATTGAAACTACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCATTGGAAAGGCCACTaGTGCCCAGGCCACCATTTA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRHWKGH*CPGHHL
Trigger: TAAATGGTGGCCTGGGCAGCAGTGGCCTTTCCAATG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTCCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 4 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAAGGGGGTTCAGGTaGTCTCCGCAGTTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LTPHRHALGTTMNKRQESERGFR*SPQLRT
Trigger: AGTTCTCAACTGCGGAGAGCACCTGAACCCCCTTTC...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR GCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGTCTAGGCTCTACCTCTaGTTCTCGTGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMSRLYL*FSCLSR
Trigger: CCTGGAGAGACACGAGAAGCAGAGGTAGAGCCTAGA...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CAAAAGAAAGAACAATACATGCGGTCTCCTCAAGCCCCACAGACTGTATCAGCACTCTTACCCACCTGCTaGCACCTTCTAGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: QKKEQYMRSPQAPQTVSALLPTC*HLLGST
Trigger: GGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAG...TGCTGATACAGTCTGTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp ACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAAGTCAGACTGTGGGGTaGACAGCAGTCTCTCAGGCT +
Preference number: 4 (lower is better)
Translates to: TMRKEQLSQLQWDNPTPPSQTVG*TAVSQA
Trigger: AGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACT...TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTNQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAAATCAGAAAGGCAGCTaGCGCTCCAGGGTCTCAAAT +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTNQKGS*RSRVSN
Trigger: ATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATT...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACATGTGCTCAAGGGCAGTaGTACTGCTGTGCTAACTCA +
Preference number: 4 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTCAQGQ*YCCANS
Trigger: TGAGTTAGCACAGCAGTAGCACTGCCCTTGAGCACA...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTGCATCAAGATCTGGTTaGTCTGGGTGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: QKYKHHAVCASRAALKTIASRSG*SGWSRV
Trigger: CACCCTGGACCACCCAGACCAACCAGATCTTGATGC...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTGCATCAAGATCTGGTTaGTCTGGGTGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCASRSG*SGWSRV
Trigger: CACCCTGGACCACCCAGACCAACCAGATCTTGATGC...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTDSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: RKEQLSQLQWDNPTPPATDSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...GGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACTCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AATGTGCTAAATAAGCCTCTTACCCACCTGCTGCCACCTTCTAGGCTCTACCTCATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: NVLNKPLTHLLPPSRLYLMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...GAGGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCTTATTTAGCACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGTGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGTGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGATGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTATGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp ATGACAAGGAGAGAGCCCCCATCTGACTTAATAGCAAACCAACCCCTTTATTCTTGCTGCATCTGCTGCTaGAGCTGCTGGGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: MTRREPPSDLIANQPLYSCCICC*SCWAIL
Trigger: GAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCA...AGAATAAAGGGGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTCCTTGTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAAATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CTGGTATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTTGTGTCAGAAGATTCTaGTTGTACAGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: LVFVEVSDSRDPGIPSLACVRRF*LYRVGS
Trigger: GCTCCCCACTCTGTACAACCAGAATCTTCTGACACA...AGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGGTGACATTCCGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: LLGFAFMRKWWLGMEVTFRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...GAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAAAGAGCCAGTGCCGGGTaGCTGGTGCCCAGGGCTGTA +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQRASAG*LVPRAV
Trigger: TACAGCCCTGGGCACCAGCCACCCGGCACTGGCTCT...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAACAGCCTACCAGACACTaGGCCTCTGCCTGGCTGCCC +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQQPTRH*ASAWLP
Trigger: GGGCAGCCAGGCAGAGGCCCAGTGTCTGGTAGGCTG...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGTTGGAAATGGGCCATaGTCTAATTTGGTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEVGNGP*SNLVLK
Trigger: TTTCAACACCAAATTAGACCATGGCCCATTTCCAAC...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACAGCCTTCATGAGAAAATaGTGGCTTGGGATGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTAFMRK*WLGMEV
Trigger: CACCTCCATCCCAAGCCACCATTTTCTCATGAAGGC...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACATCCCATCCCTGGCTGTaGCTACAGTCACATCTTAAC +
Preference number: 4 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTSHPWL*LQSHLN
Trigger: GTTAAGATGTGACTGTAGCCACAGCCAGGGATGGGA...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
3UTR CAA 72 bp GTTAAATGTTTCCCTGTCCCCCTTCCCCAGGGTGGTTaGGTGTTGGTCCTTCTCAACACACACTGGTTACAA +
Preference number: 4 (lower is better)
Translates to: VKCFPVPLPQGG*VLVLLNTHWLQ
Trigger: TTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAAGGGGGACAGGGAAACATTTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp ACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAATTCATCTGTATAGGGTaGTGCATCCCTGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: TPHRHALGTTMNKRQESEFICIG*CIPGRT
Trigger: AGTCCTCCCAGGGATGCATCACCCTATACAGATGAA...TTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR TCA 90 bp CTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACTTCATTCATCTGTATAGGGTaGTGCATCCCTGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: LSAQANALRAIEEKVATSFICIG*CIPGRT
Trigger: AGTCCTCCCAGGGATGCATCACCCTATACAGATGAA...TGAAGTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCACAAACGAAGAGAACATaGCTCGGATGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPQTKRT*LGCHFQ
Trigger: CTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTG...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGGTGCTCTCCGCAGTTaGGAACTCAGAAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNGALRS*ELRRKT
Trigger: TGTTTTTCTTCTGAGTTCTCAACTGCGGAGAGCACC...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
CDS-3UTR TCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCATTCCGGACAAGAATCTaGAAAATAGGTGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPFRTRI*KIGVKN
Trigger: GTTTTTGACACCTATTTTTCAGATTCTTGTCCGGAA...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTCATTCCTTGCTGTGGTaGACTGCAAAGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPHSLLW*TAKKET
Trigger: GGTTTCCTTCTTTGCAGTTCACCACAGCAAGGAATG...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AAATTTTTCAGGGAAGAGGACCAGAATTTCTGCTCAATCTTATGGGGATGGCCCCTGGCCACTGGCAAATaGAGCATACTGGCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KFFREEDQNFCSILWGWPLATGK*SILACR
Trigger: CCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAG...GGGCCATCCCCATAAGATTGAGCAGAAATTCTGGTCCTCTTCCCTGAAAAATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGAGAGCCCCCATCTaGCTTAATAGCAAACCAACC +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQERAPI*LNSKPT
Trigger: GGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTC...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp CCCCAACTAGATGGTATTGATCACTCTGCCCACAAATGGTACCCCCTTCAGCAACCCAAGTTATCACTATaGGAAAGGAACAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: PQLDGIDHSAHKWYPLQQPKLSL*ERNSCP
Trigger: GGGACAGCTGTTCCTTTCTCATAGTGATAACTTGGG...TTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACACCCAAGTTATCACTATaGGAAAGGAACAGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTPKLSL*ERNSCP
Trigger: GGGACAGCTGTTCCTTTCTCATAGTGATAACTTGGG...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCGGCTTGGATTTTCCATaGAGCACCCAACTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGGLDFP*STQLLR
Trigger: TCTTAGGAGTTGGGTGCTTCATGGAAAATCCAAGCC...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAAGAGGGAGACCCACTaGGTTACACAGAGCAATACA +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHKRETH*VTQSNT
Trigger: TGTATTGCTCTGTGTAACTCAGTGGGTCTCCCTCTT...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGCAAAACAGCACCCTTTaGTCTGAGGCGGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKQNSTL*SEAGFG
Trigger: GCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTG...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCTGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGCKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGTGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTCKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCTGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGICKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGATGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRCKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAACTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAACCCTCCATGGTCTGTaGTTGGTGCATTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQTLHGL*LVHCLD
Trigger: ATCAAGGCAATGCACCAAGCACAGACCATGGAGGGT...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAATCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp AACCTTCACACAACAGAAAAGGATTGCTTAAGACTTGACAGCGAGTCTCCACTCGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: NLHTTEKDCLRLDSESPLAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...GAGTGGAGACTCGCTGTCAAGTCTTAAGCAATCCTTTTCTGTTGTGTGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: EETGIWTMYLTPHRHALGTLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHTLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGITLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp AACCTTCACACAACAGAAAAGGATTGCTTAAGACTTGACAGCGAGTCTCCACTCCTCTTACCCACCTGCTaGCACCTTCTAGGCTCTACC +
Preference number: 4 (lower is better)
Translates to: NLHTTEKDCLRLDSESPLLLPTC*HLLGST
Trigger: GGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAG...GAGTGGAGACTCGCTGTCAAGTCTTAAGCAATCCTTTTCTGTTGTGTGAAGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGCCTTGGTGTGGAGGATaGTCAATAGCGCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKPWCGG*SIALPP
Trigger: AGGTGGAAGCGCTATTGAGCATCCTCCACACCAAGG...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTCCAGAGCAGAAACCCTaGTGGGATCCCTTCCTTCAT +
Preference number: 4 (lower is better)
Translates to: QKYKHHAVCASRAALKTIPEQKP*WDPFLH
Trigger: ATGAAGGAAGGGATCCCAGCAGGGTTTCTGCTCTGG...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp ACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCACAATCCAATACTGACTaGTGGCTGGGGGAGCTCGTA +
Preference number: 4 (lower is better)
Translates to: TMRKEQLSQLQWDNPTPPQSNTD*WLGELV
Trigger: TACGAGCTCCCCCAGCCAGCAGTCAGTATTGGATTG...TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCTTGCTGTGGTGAACTaGAAAGAAGGAAACCAGGCA +
Preference number: 4 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQELAVVN*KEGNQA
Trigger: TGCCTGGTTTCCTTCTTTGCAGTTCACCACAGCAAG...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TCTGGCCACTGGCAAATGAAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGTGGAGGTGACATTCCTTaGTGTGGTGAACTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: SGHWQMKHTGLQGPSDSSGGDIP*CGELQR
Trigger: TCTTTGCAGTTCACCACAGCAAGGAATGTCACCTCC...ACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCAGGAGGTGACATTCCTTaGTGTGGTGAACTGCAAAGA +
Preference number: 4 (lower is better)
Translates to: PGWFGVGPSQHTLVTNTAGGDIP*CGELQR
Trigger: TCTTTGCAGTTCACCACAGCAAGGAATGTCACCTCC...TGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTACAAAGGTGGGTGGATTaGACCTTGGCCTCTTATGTC +
Preference number: 4 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVQRWVD*TLASYV
Trigger: GACATAAGAGGCCAAGGTGCAATCCACCCACCTTTG...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAAGGCTCTACATAGGGTaGACAATGATTCATAGTATA +
Preference number: 4 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPRLYIG*TMIHSI
Trigger: TATACTATGAATCATTGTGCACCCTATGTAGAGCCT...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR CCA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQDSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHDSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGTCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCATGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: TMRKEQLSQLQWDNPTPPCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp AAACAAAGCCTAGAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: KQSLETDWLCVHRNTNTTIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...CGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: ISPSAQNFKFTWFSLRSVCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...TACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTTGCTCCCGGTGCCATTaGAAAGGCCACTGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFCSRCH*KGHCCP
Trigger: TGGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCA...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCTGTGTCAGAAGATTCTaGTTGTACAGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSCVRRF*LYRVGS
Trigger: GCTCCCCACTCTGTACAACCAGAATCTTCTGACACA...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CCA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGCAGGTTGGCTCCCTCTaGACCTTCCTTCTGGCTTCC +
Preference number: 4 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKQVGSL*TFLLAS
Trigger: GGAAGCCAGAAGGAAGGTCCAGAGGGAGCCAACCTG...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAAGCCCCGGTAAGACCTaGAGGCCACACGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPSPGKT*RPHEVT
Trigger: TGTCACTTCGTGTGGCCTCCAGGTCTTACCGGGGCT...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp ACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAATCAGGCTGGGGTTTCTaGCCTCTTTCCATCCAATCA +
Preference number: 4 (lower is better)
Translates to: TPHRHALGTTMNKRQESESGWGF*PLSIQS
Trigger: TGATTGGATGGAAAGAGGCCAGAAACCCCAGCCTGA...TTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGTCAGGCTGGGGTTTCTaGCCTCTTTCCATCCAATCA +
Preference number: 4 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMSGWGF*PLSIQS
Trigger: TGATTGGATGGAAAGAGGCCAGAAACCCCAGCCTGA...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGAGGGTGGTTTGGTGTTaGTCCTTCTCAACACACACT +
Preference number: 4 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQRVVWC*SFSTHT
Trigger: AGTGTGTGTTGAGAAGGACCAACACCAAACCACCCT...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACTCAGTCCTCTCTCTTaGGGTGGTTTGGGGCAAATC +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLLSPLS*GGLGQI
Trigger: GATTTGCCCCAAACCACCCCAAGAGAGAGGACTGAG...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGAGAAAATGGTGGCTTaGGATGGAGGTGACATTCCT +
Preference number: 4 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQEKMVA*DGGDIP
Trigger: AGGAATGTCACCTCCATCCCAAGCCACCATTTTCTC...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACAGCAAGGGAGAATTTCTaGCCACTGGCAAATGAAGCA +
Preference number: 4 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTARENF*PLANEA
Trigger: TGCTTCATTTGCCAGTGGCCAGAAATTCTCCCTTGC...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAAGCAGAAAATGTGACTaGAGTGGTTACAGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQSRKCD*SGYRRG
Trigger: GCCCCTCCTGTAACCACTCCAGTCACATTTTCTGCT...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGCAAATAATGGTGAGATaGGGGAAGGCGGAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQQIMVR*GKAERR
Trigger: TCTTCTCTCCGCCTTCCCCCATCTCACCATTATTTG...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGAAGTCAAAAAGGACATaGAGGACACCAAGAACACAT +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLKSKRT*RTPRTH
Trigger: ATGTGTTCTTGGTGTCCTCCATGTCCTTTTTGACTT...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAATTCATCTGTATAGGGTaGTGCATCCCTGGGAGGACT +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKFICIG*CIPGRT
Trigger: AGTCCTCCCAGGGATGCATCACCCTATACAGATGAA...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCCAAACGAAGAGAACATaGCTCGGATGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTQTKRT*LGCHFQ
Trigger: CTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTG...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR TCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACATTGTCTGCTTGTCTATaGAAACCTTGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTLSACL*KPWQTR
Trigger: TCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAA...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCAGTTGTCTGCTTGTCTATaGAAACCTTGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: SIHVEAVNVLMSPLPQEQLSACL*KPWQTR
Trigger: TCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAA...CTGCTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTTGTCTGCTTGTCTATaGAAACCTTGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: RKEQLSQLQWDNPTPPATLSACL*KPWQTR
Trigger: TCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAA...GGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGATTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR TCA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 4 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGGTGCTCTCCGCAGTTaGGAACTCAGAAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: LTPHRHALGTTMNKRQESGALRS*ELRRKT
Trigger: TGTTTTTCTTCTGAGTTCTCAACTGCGGAGAGCACC...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000358597.7
CDS-3UTR TCA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGATATATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTIYTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATATAT...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR TCA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGAGAGAGCCCCCATCTaGCTTAATAGCAAACCAACC +
Preference number: 4 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPERAPI*LNSKPT
Trigger: GGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTC...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAGGATTGCTTAAGACTTaGCAGCGAGTCTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQGLLKT*QRVSTL
Trigger: CAGAGTGGAGACTCGCTGTCAAGTCTTAAGCAATCC...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGCCAAGAAAGAGAAGATaGAGCAGATATAATGCCACA +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMPRKRR*SRYNAT
Trigger: TGTGGCATTATATCTGCTTCATCTTCTCTTTCTTGG...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: YLTPHRHALGTTMNKRQECKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTCTCTTGGGGTGGTTTGGGGCAAATCCTGATCATCGTCTGTGTTAAATGTTTCATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: LSWGGLGQILIIVCVKCFMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...GAAACATTTAACACAGACGATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCGCTGCGCTGATTTGCTaGATCTGCTGCTGGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFAALIC*ICCWSC
Trigger: GCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGC...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCT +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPAPANV*RAPSEA
Trigger: AGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGC...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: LTPHRHALGTTMNKRQESAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGTTCGAACGTTTGAGCTaGACTTTAAGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: VCSQKYKHHAVCASRAALFERLS*TLSRFM
Trigger: CATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAA...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCTTCGAACGTTTGAGCTaGACTTTAAGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSFERLS*TLSRFM
Trigger: CATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAA...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTTLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGAGAAAGAACAATACATaGGGTCTCCTCAAGCCCCAC +
Preference number: 4 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQRKNNT*GLLKPH
Trigger: GTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCT...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
CDS-3UTR GCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCCGCCAGCAGGTGAATTaGCGCTTGGTGTGCAGATGG +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFRQQVN*RLVCRW
Trigger: CCATCTGCACACCAAGCGGCAATTCACCTGCTGGCG...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTACCCTTCAGCAAGAACTaGAAGCCCTTCTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVPFSKN*KPFLDL
Trigger: CAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGG...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp ACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCACTGGGTGGTCCAGGGTaGCGTTCATTTTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: TMRKEQLSQLQWDNPTPPLGGPG*RSFSLR
Trigger: TCTCAAAGAAAATGAACGGCACCCTGGACCACCCAG...TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGGCATCAAGATCTGGTTaGTCTGGGTGGTCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKASRSG*SGWSRV
Trigger: CACCCTGGACCACCCAGACCAACCAGATCTTGATGC...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAGATAGCATCAAGATCTaGTTGGTCTGGGTGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQDSIKI*LVWVVQ
Trigger: CTGGACCACCCAGACCAACCAGATCTTGATGCTATC...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGGTGACATTCTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: LLGFAFMRKWWLGMEVTFFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...GAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CTCTCTTGGGGTGGTTTGGGGCAAATCCTGATCATCGTCTGTGTTAAATGTTTCTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: LSWGGLGQILIIVCVKCFFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...GAAACATTTAACACAGACGATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGTCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAAATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGCAAATTTTACCACCATaGGTGATGAGCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: LQALLGFAFMRKWWLGMEQILPP*VMSNPP
Trigger: TGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTG...CTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp ATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTAAACCCTCCCATTGGGTaGAGGCTGCTCAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: ISPSAQNFKFTWFSLRSVNPPIG*RLLRVL
Trigger: CAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTT...TACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: HHAVCASRAALKTITKNWSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCACGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAGCCTAGAAACGGACTaGCTGTGTGTTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHSLETD*LCVHRN
Trigger: ATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCT...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGCCTAGAAACGGACTaGCTGTGTGTTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGISLETD*LCVHRN
Trigger: ATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCT...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CAGTCTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACGGGACAGTAGCTGTTTaGCTCTCCACCCAATTAAAA +
Preference number: 4 (lower is better)
Translates to: QSKCTGKRSKGNRGESCHGTVAV*LSTQLK
Trigger: TTTTAATTGGGTGGAGAGCCAAACAGCTACTGTCCC...GTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp GCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGATCATCAACCTTGGTGTaGAGGATGCTCAATAGCGCT +
Preference number: 4 (lower is better)
Translates to: ATSTCFRHNDEQTAGIRRSSTLV*RMLNSA
Trigger: AGCGCTATTGAGCATCCTCCACACCAAGGTTGATGA...TCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTAGCAGTCTCTCAGGCTaGGGTTTCTGGCCTCTTTCC +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCSSLSG*GFWPLS
Trigger: GGAAAGAGGCCAGAAACCCCAGCCTGAGAGACTGCT...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGAAAAACCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLKNLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGTTTTT...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCCTTCATGAGAAAATGGAGAAAATGGTGGCTTaGGATGGAGGTGACATTCCT +
Preference number: 4 (lower is better)
Translates to: PPSARTASPSWICLHEKMEKMVA*DGGDIP
Trigger: AGGAATGTCACCTCCATCCCAAGCCACCATTTTCTC...CATTTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCATTCATGAGAAAATGGTaGCTTGGGATGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: PGWFGVGPSQHTLVTNTAFMRKW*LGMEVT
Trigger: TGTCACCTCCATCCCAAGCCACCATTTTCTCATGAA...TGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACACTCTGCCCACAAATaGTACCCCCTTCAGCAAGAA +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLHSAHK*YPLQQE
Trigger: TTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTG...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GGAAATCAGAAAGGCAGCTGCCGCTCCAGGGTCTCAAATCCATTAAAACCACCAAGAATTTCTGGCCACTaGCAAATGAAGCATACTGGC +
Preference number: 4 (lower is better)
Translates to: GNQKGSCRSRVSNPLKPPRISGH*QMKHTG
Trigger: GCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCT...TGGTGGTTTTAATGGATTTGAGACCCTGGAGCGGCAGCTGCCTTTCTGATTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCACAGGGATCCCATCCCTaGCTGTGGCTACAGTCACAT +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPQGSHP*LWLQSH
Trigger: ATGTGACTGTAGCCACAGCCAGGGATGGGATCCCTG...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTAAGGGAGTGGCGTTCTaGCTAAGGAGGAAGACAGAA +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCKGVAF*LRRKTE
Trigger: TTCTGTCTTCCTCCTTAGCCAGAACGCCACTCCCTT...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACTATCCCTTAGGACGTTaGTTTCATACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHYPLGR*FHTQHH
Trigger: ATGGTGCTGTGTATGAAATCAACGTCCTAAGGGATA...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGCAAACGAAGAGAACATaGCTCGGATGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTQTKRT*LGCHFQ
Trigger: CTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTG...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCCAAACGAAGAGAACATaGCTCGGATGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLQTKRT*LGCHFQ
Trigger: CTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTG...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TCTGGCCACTGGCAAATGAAGCATACTGGCTTGCAGGGACCTTCTGATTCAAGTCAAACGAAGAGAACATaGCTCGGATGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: SGHWQMKHTGLQGPSDSSQTKRT*LGCHFQ
Trigger: CTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTG...ACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLGCSGC*GSQRRQ
Trigger: CTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCC...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGTTGTCTGCTTGTCTATaGAAACCTTGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTLSACL*KPWQTR
Trigger: TCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAA...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGACACAAGGTCAAAGGTaGGAGTTCAAGCATCAGAGA +
Preference number: 4 (lower is better)
Translates to: HHAVCASRAALKTITKNWTQGQR*EFKHQR
Trigger: TCTCTGATGCTTGAACTCTCACCTTTGACCTTGTGT...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTGGTGCTCTCCGCAGTTaGGAACTCAGAAGAAAAACA +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCGALRS*ELRRKT
Trigger: TGTTTTTCTTCTGAGTTCTCAACTGCGGAGAGCACC...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp TGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAATATATACGAAGGTGTaGAGAAACAGCAGGAAACAT +
Preference number: 4 (lower is better)
Translates to: CGYSHILTGPPLPRCTFPIYTKV*RNSRKH
Trigger: ATGTTTCCTGCTGTTTCTTCACACCTTCGTATATAT...TGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGTTGGATTTGCCTTCATaGGAAAATGGTGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMLDLPS*ENGGLG
Trigger: TCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAA...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAACTTGCAGGGACCTTCTaGTTCAAGTACACCAAGAAA +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQLAGTF*FKYTKK
Trigger: TTTCTTGGTGTACTTGAATCAGAAGGTCCCTGCAAG...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACAGAAGAGATCCCTAAGTaGTTCAGAGCCAGAATACAT +
Preference number: 4 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTEEIPK*FRARIH
Trigger: ATGTATTCTGGCTCTGAATCACTTAGGGATCTCTTC...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR TCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTGTCACAGGCAAGAGCTaGAGTAAGACCAGAAGACCC +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCVTGKS*SKTRRP
Trigger: GGGTCTTCTGGTCTTACTTCAGCTCTTGCCTGTGAC...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGCAAAACAGCACCCTTTaGTCTGAGGCGGGTTTTGGC +
Preference number: 4 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKQNSTL*SEAGFG
Trigger: GCCAAAACCCGCCTCAGAGCAAAGGGTGCTGTTTTG...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRLDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTTAATAGCAAACCAACCCCTTTATTCTTATCTCTGCTGCTAGGGGTCAAGACTCTGTGCTTGGTGCATTaGCTTGATAGCCGTCTGTGC +
Preference number: 4 (lower is better)
Translates to: LNSKPTPLFLSLLLGVKTLCLVH*LDSRLC
Trigger: GCACAGACGGCTATCAAGGCAATGCACCAAGCACAG...AGTCTTGACCCCTAGCAGCAGAGATAAGAATAAAGGGGTTGGTTTGCTATTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: HISPSAQNFKFTWFSLRSICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...ACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCCATGGTGCTCCCGGTaGCATTGGAAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWPWCSR*HWKGHC
Trigger: GCAGTGGCCTTTCCAATGGCACCGGGAGCACCATGG...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CAAAAGAAAGAACAATACATGCGGTCTCCTCAAGCCCCACAGACTGTATCAGCAGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: QKKEQYMRSPQAPQTVSAAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...TGCTGATACAGTCTGTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
CDS-3UTR GCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCTLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTGCCCAAAGTGCAGCCTaGGGTCAAAAAGGAAAGGGG +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFAQSAA*GQKGKG
Trigger: CCCCTTTCCTTTTTGACCGCAGGCTGCACTTTGGGC...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCAAAGCATCACATTTTaGTGTGGAGACTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQEQSITF*CGDCWN
Trigger: GTTCCAACAGTCTCCACAGCAAAATGTGATGCTTTG...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp ATGACAAGGAGAGAGCCCCCATCTGACTTAATAGCAAACCAACCCCTTTATTCTTGCCGCCCTGCTTTTTaGATATGTCAGGCTAACAGG +
Preference number: 4 (lower is better)
Translates to: MTRREPPSDLIANQPLYSCRPAF*ICQANR
Trigger: CCTGTTAGCCTGACATATGCAAAAAGCAGGGCGGCA...AGAATAAAGGGGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTCCTTGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCACAACAGAAAAGGATTaGTTAAGACTTGACAGCGAG +
Preference number: 4 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTTTEKD*LRLDSE
Trigger: CTCGCTGTCAAGTCTTAAGCAATCCTTTTCTGTTGT...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp CCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCAAGACAGTGGTCTGGCTaGATTCAAGGCAAATCAATT +
Preference number: 4 (lower is better)
Translates to: PGWFGVGPSQHTLVTNTARQWSG*IQGKSI
Trigger: AATTGATTTGCCTTGAATGCAGCCAGACCACTGTCT...TGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTCAGGTCCTTGGAACCTaGCCCACAAACATCTTGATA +
Preference number: 4 (lower is better)
Translates to: QKYKHHAVCASRAALKTIQVLGT*PTNILI
Trigger: TATCAAGATGTTTGTGGGCCAGGTTCCAAGGACCTG...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTACAAATTTTACCACCATaGGTGATGAGCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVQILPP*VMSNPP
Trigger: TGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTG...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFSGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAATGTGTCAGAAGATTCTaGTTGTACAGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKCVRRF*LYRVGS
Trigger: GCTCCCCACTCTGTACAACCAGAATCTTCTGACACA...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAAGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: DLDDVLDATSTCFRHNDEEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTAGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCAGCCTAGAAACGGACTaGCTGTGTGTTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPSLETD*LCVHRN
Trigger: ATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCT...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395292.6
CDS-3UTR CCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAAAGCCCCGGTAAGACCTaGAGGCCACACGAAGTGACA +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQSPGKT*RPHEVT
Trigger: TGTCACTTCGTGTGGCCTCCAGGTCTTACCGGGGCT...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CAAAAGAAAGAACAATACATGCGGTCTCCTCAAGCCCCACAGACTGTATCAGCACAGCTTAAGTCTGGGTaGGATCTATCATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QKKEQYMRSPQAPQTVSAQLKSG*DLSSAP
Trigger: AGGAGCTGATGATAGATCCCACCCAGACTTAAGCTG...TGCTGATACAGTCTGTGGGGCTTGAGGAGACCGCATGTATTGTTCTTTCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAATCATCAACCTTGGTGTaGAGGATGCTCAATAGCGCT +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQSSTLV*RMLNSA
Trigger: AGCGCTATTGAGCATCCTCCACACCAAGGTTGATGA...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGTTCATGAGAAAATGGTaGCTTGGGATGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: HHAVCASRAALKTITKNWFMRKW*LGMEVT
Trigger: TGTCACCTCCATCCCAAGCCACCATTTTCTCATGAA...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTCTGTCCCAGCTTCAATaGGATAATCCAACACCACCA +
Preference number: 4 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPLSQLQ*DNPTPP
Trigger: TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAG...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTAGGGTGGATTGCACCTTaGCCTCTTATGTCATTAGGA +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLGWIAP*PLMSLG
Trigger: TCCTAATGACATAAGAGGCCAAGGTGCAATCCACCC...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTGTCTGGTATCAAAGGTaGGTGGATTGCACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCVWYQR*VDCTLA
Trigger: GGCCAAGGTGCAATCCACCCACCTTTGATACCAGAC...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp CAGGCAATGTATTCCATAGAGGCCTTTAAAGAGACCCGTTGGAAATGGGCCATGAAACCATCTTTGGCCTaGGGAAAGAACTGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: QAMYSIEAFKETRWKWAMKPSLA*GKNCAQ
Trigger: TTGAGCACAGTTCTTTCCCCAGGCCAAAGATGGTTT...CATGGCCCATTTCCAACGGGTCTCTTTAAAGGCCTCTATGGAATACATTGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CAA 72 bp ATTCTTATCTCTGCTGCTAGGGGTCAAGACTGGTATTaGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: ILISAARGQDWY*LRFQIPETQGS
Trigger: GGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATACCAGTCTTGACCCCTAGCAGCAGAGATAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATT +
Preference number: 4 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGLVGLL*RQLQRI
Trigger: AATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGACTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATT +
Preference number: 4 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRLVGLL*RQLQRI
Trigger: AATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAG...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395292.6
CDS-3UTR TCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGTTCCGGACAAGAATCTaGAAAATAGGTGTCAAAAAC +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWFRTRI*KIGVKN
Trigger: GTTTTTGACACCTATTTTTCAGATTCTTGTCCGGAA...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp CTCTCTTGGGGTGGTTTGGGGCAAATCCTGATCATCGTCTGTGTTAAATGTTTCTTGGATTTGCCTTCATaGGAAAATGGTGGCTTGGGA +
Preference number: 4 (lower is better)
Translates to: LSWGGLGQILIIVCVKCFLDLPS*ENGGLG
Trigger: TCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAA...GAAACATTTAACACAGACGATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKLDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAACTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQLDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTCTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: QKYKHHAVCASRAALKTILDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTCTCTTGGGGTGGTTTGGGGCAAATCCTGATCATCGTCTGTGTTAAATGTTTCCTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: LSWGGLGQILIIVCVKCFLDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...GAAACATTTAACACAGACGATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp ATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: ISPSAQNFKFTWFSLRSVSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...TACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACTTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAATTCGAACGTTTGAGCTaGACTTTAAGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQFERLS*TLSRFM
Trigger: CATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAA...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTATTCGAACGTTTGAGCTaGACTTTAAGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLFERLS*TLSRFM
Trigger: CATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAA...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp ATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTAGAAAGGGGGTTCAGGTaGTCTCCGCAGTTGAGAACT +
Preference number: 4 (lower is better)
Translates to: ISPSAQNFKFTWFSLRSVERGFR*SPQLRT
Trigger: AGTTCTCAACTGCGGAGAGCACCTGAACCCCCTTTC...TACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR GCA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGCAAAGCATCACATTTTaGTGTGGAGACTGTTGGAAC +
Preference number: 4 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQQSITF*CGDCWN
Trigger: GTTCCAACAGTCTCCACAGCAAAATGTGATGCTTTG...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGATCCAAAACCTACAATaGACAAGGTGCAGAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQIQNLQ*TRCRRD
Trigger: ATCTCTTCTGCACCTTGTGCATTGTAGGTTTTGGAT...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCACTGGGTGGTCCAGGGTaGCGTTCATTTTCTTTGAGA +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPLGGPG*RSFSLR
Trigger: TCTCAAAGAAAATGAACGGCACCCTGGACCACCCAG...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp CTTAATAGCAAACCAACCCCTTTATTCTTATCTCTGCTGCTAGGGGTCAAGACTAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: LNSKPTPLFLSLLLGVKTRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...AGTCTTGACCCCTAGCAGCAGAGATAAGAATAAAGGGGTTGGTTTGCTATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp GATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAATTTTACCACCATaGGTGATGAGCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: DLDDVLDATSTCFRHNDEQILPP*VMSNPP
Trigger: TGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTG...TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTCAAATTTTACCACCATaGGTGATGAGCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCQILPP*VMSNPP
Trigger: TGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTG...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCATCACATTTTGCTGTaGAGACTGTTGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRHHILL*RLLEQA
Trigger: TGCTTGTTCCAACAGTCTCCACAGCAAAATGTGATG...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGCATCACATTTTGCTGTaGAGACTGTTGGAACAAGCA +
Preference number: 4 (lower is better)
Translates to: HHAVCASRAALKTITKNWHHILL*RLLEQA
Trigger: TGCTTGTTCCAACAGTCTCCACAGCAAAATGTGATG...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGAAAAACCTCAGGATATaGCACCTAAACTCCAAAGTA +
Preference number: 4 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWKNLRI*HLNSKV
Trigger: TACTTTGGAGTTTAGGTGCCATATCCTGAGGTTTTT...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACATGTACAACAGTAAGATaGTCAATCCCTGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTCTTVR*SIPVCY
Trigger: GTAACAGACAGGGATTGACCATCTTACTGTTGTACA...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAACCCAGGACAAATCCATaGACAAATAATGGTGAGATG +
Preference number: 4 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQPRTNP*TNNGEM
Trigger: CATCTCACCATTATTTGTCCATGGATTTGTCCTGGG...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CAA 72 bp TATAAAAATAGAAACGACATTCTTGGTTCCAGCCGGTaGGGATTCAGAACAGCGCCTCCCCAACCTAGCATT +
Preference number: 4 (lower is better)
Translates to: YKNRNDILGSSR*GFRTAPPQPSI
Trigger: AATGCTAGGTTGGGGAGGCGCTGTTCTGAATCCCAACCGGCTGGAACCAAGAATGTCGTTTCTATTTTTATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CAA 72 bp ACCAGAATTTCTGCTCAATCTTATGGGGATGGCCCTTaGTTCCCAGAAATCCAAGCTCTTAGCTTCCATCCA +
Preference number: 4 (lower is better)
Translates to: TRISAQSYGDGP*FPEIQALSFHP
Trigger: TGGATGGAAGCTAAGAGCTTGGATTTCTGGGAACAAAGGGCCATCCCCATAAGATTGAGCAGAAATTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR TCA 90 bp ATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACCAAACGAAGAGAACATaGCTCGGATGTCATTTTCAG +
Preference number: 4 (lower is better)
Translates to: IWTMYLTPHRHALGTTMNQTKRT*LGCHFQ
Trigger: CTGAAAATGACATCCGAGTCATGTTCTCTTCGTTTG...GTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCTTACTTCGTCTACCTTaGTTTCTGCTGAAACATACT +
Preference number: 4 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSLLRLP*FLLKHT
Trigger: AGTATGTTTCAGCAGAAATCAAGGTAGACGAAGTAA...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395292.6
CDS-3UTR TCA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCATTTTCTTTGAGCTaGGGAGGTAGTTACTCTCAT +
Preference number: 4 (lower is better)
Translates to: YLTPHRHALGTTMNKRQESFSLS*GGSYSH
Trigger: ATGAGAGTAACTACCTCCTCAGCTCAAAGAAAATGA...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395292.6
CDS-3UTR TCA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAAAGCTGTACAGGAGTTTaGGTCTCCAGCTGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKSCTGV*VSSCQG
Trigger: GCCCTGGCAGCTGGAGACTCAAACTCCTGTACAGCT...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCACATTCCTTGCTGTGGTaGACTGCAAAGAAGGAAACC +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPHSLLW*TAKKET
Trigger: GGTTTCCTTCTTTGCAGTTCACCACAGCAAGGAATG...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTGATTTTAATCTCCAATaGCAGGCTCTACATAGGGTG +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCDFNLQ*QALHRV
Trigger: CACCCTATGTAGAGCCTGTCATTGGAGATTAAAATC...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp CAGTCTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: QSKCTGKRSKGNRGESCHGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...GTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAGACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: LDATSTCFRHNDEQTAGIGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: HSIHVEAVNVLMSPLPQEGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...CTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAAATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAACTGATTTGCTGCATCTaGTGCTGGAGCTGCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKLICCI*CWSCWA
Trigger: GGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAG...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTGCAGCACCAATACTCTaGTGTGTCAGAAGATTCTGG +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCAAPIL*CVRRFW
Trigger: CCAGAATCTTCTGACACAGCAGAGTATTGGTGCTGC...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR GCA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGTTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTATTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: ETDWLCVHRNTNTTRYVLLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...TAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAATCTAGGCTCTACCTCTaGTTCTCGTGTCTCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQSRLYL*FSCLSR
Trigger: CCTGGAGAGACACGAGAAGCAGAGGTAGAGCCTAGA...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTAGCCCTTCTTGGATTTaGCTTCATGAGAAAATGGTG +
Preference number: 4 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPSPSWI*LHEKMV
Trigger: CACCATTTTCTCATGAAGGCAAATCCAAGAAGGGCT...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGTCTGGTTGGTCTGGGTaGTCCAGGGTGCCGTTCATT +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWSGWSG*SRVPFI
Trigger: AATGAACGGCACCCTGGACCACCCAGACCAACCAGA...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCAGGGTGATGCATCCCTaGGAGGACTTTCATGTTGTG +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFRVMHP*EDFHVV
Trigger: CACAACATGAAAGTCCTCCCAGGGATGCATCACCCT...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp ATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATCCATGGTCTGTGCTTaGTGCATTGCCTTGATAGCC +
Preference number: 4 (lower is better)
Translates to: ISPSAQNFKFTWFSLRSVSMVCA*CIALIA
Trigger: GGCTATCAAGGCAATGCACCAAGCACAGACCATGGA...TACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAATGCTGCTGGAGCTGCTaGGCCATTCTCTTCTGTTCT +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQCCWSC*AILFCS
Trigger: AGAACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCA...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGATTCAACCCTCCCATTaGGTGGAGGCTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWIQPSH*VEAAQG
Trigger: ACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAAT...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWSGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCATGTGTCAGAAGATTCTaGTTGTACAGAGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPCVRRF*LYRVGS
Trigger: GCTCCCCACTCTGTACAACCAGAATCTTCTGACACA...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCGTTCATGGACTGGATaGCAGCTTGGGCCGAAACAG +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWRSWTG*QLGPKQ
Trigger: CTGTTTCGGCCCAAGCTGCCATCCAGTCCATGAACG...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ATGACAAGGAGAGAGCCCCCATCTGACTTAATAGCAAACCAACCCCTTTATTCTGGGACAGTAGCTGTTTaGCTCTCCACCCAATTAAAA +
Preference number: 4 (lower is better)
Translates to: MTRREPPSDLIANQPLYSGTVAV*LSTQLK
Trigger: TTTTAATTGGGTGGAGAGCCAAACAGCTACTGTCCC...AGAATAAAGGGGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTCCTTGTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTAACTGCAAGCCCTTCTTaGATTTGCCTTCATGAGAAA +
Preference number: 4 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLTASPS*ICLHEK
Trigger: TTTCTCATGAAGGCAAATCCAAGAAGGGCTTGCAGT...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAGCAAGGGAGAATTTCTaGCCACTGGCAAATGAAGCA +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPARENF*PLANEA
Trigger: TGCTTCATTTGCCAGTGGCCAGAAATTCTCCCTTGC...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGTCAATCTTATGGGGATaGCCCTTTGTTCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKSILWG*PFVPRN
Trigger: ATTTCTGGGAACAAAGGGCCATCCCCATAAGATTGA...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
3UTR CAA 72 bp AGAATTTCTGGCCACTGGCAAATGAAGCATACTGGCTaGCAGGGACCTTCTGATTCAAGTACACCAAGAAAT +
Preference number: 4 (lower is better)
Translates to: RISGHWQMKHTG*QGPSDSSTPRN
Trigger: ATTTCTTGGTGTACTTGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp ATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTACAAGAGCAGAAAATGTaGCTGGAGTGGTTACAGGAG +
Preference number: 4 (lower is better)
Translates to: ISPSAQNFKFTWFSLRSVQEQKM*LEWLQE
Trigger: CTCCTGTAACCACTCCAGTCACATTTTCTGCTCTTG...TACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCTGTAAAAGTCACAAATaGACAACCTCGGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFCKSHK*TTSAQA
Trigger: GGCCTGAGCCGAGGTTGTGCATTTGTGACTTTTACA...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAAACCCTCCATGGTCTGTaGTTGGTGCATTGCCTTGAT +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQTLHGL*LVHCLD
Trigger: ATCAAGGCAATGCACCAAGCACAGACCATGGAGGGT...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGATCTGCTGCTGGAGCTaGTGGGCCATTCTCTTCTGT +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWICCWS*WAILFC
Trigger: ACAGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGAT...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp ATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACTTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: IWTMYLTPHRHALGTTMNLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...GTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTTTGCTCAGGTTTGTCTaGTTGTCTATGAAAACCTTG +
Preference number: 4 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPLLRFV*LSMKTL
Trigger: CAAGGTTTTCATAGACAAGCAGACAAACCTGAGCAA...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFTLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp CTAAGTGCACAGGCAAACGCTCTAAGGGCAATAGAGGAGAAAGTTGCCACTTCATATATTGGCAAACACTaGTTCTCAATACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LSAQANALRAIEEKVATSYIGKH*FSIHRK
Trigger: CTTCCTGTGTATTGAGAAGCAGTGTTTGCCAATATA...TGAAGTGGCAACTTTCTCCTCTATTGCCCTTAGAGCGTTTGCCTGTGCACTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR GCA 90 bp TCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAAGAGCAGATGATATTAACTTGCTaGACTTGTCTGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: SIHVEAVNVLMSPLPQEQMILTC*TCLIHK
Trigger: TTTGTGGATCAGACAAGTGCAGCAAGTTAATATCAT...CTGCTCTTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS-3UTR GCA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTATGATATTAACTTGCTaGACTTGTCTGATCCACAAA +
Preference number: 4 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPMILTC*TCLIHK
Trigger: TTTGTGGATCAGACAAGTGCAGCAAGTTAATATCAT...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCAGTCACACAGAACTCTaGATCCATACCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFSHTEL*IHTTQP
Trigger: TGGCTGTGTGGTATGGATGCAGAGTTCTGTGTGACT...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR CCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAAATGAGCAACCCTCCATaGTCTGTGCTTGGTGCATTG +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQMSNPP*SVLGAL
Trigger: CAATGCACCAAGCACAGACCATGGAGGGTTGCTCAT...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLSGCTE*GAQQQH
Trigger: ATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGA...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCAGCTTAAGTCTGGGTaGGATCTATCATCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFQLKSG*DLSSAP
Trigger: AGGAGCTGATGATAGATCCCACCCAGACTTAAGCTG...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTTGGAAATGGGCCATaGTCTAATTTGGTGTTGAAA +
Preference number: 4 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPVGNGP*SNLVLK
Trigger: TTTCAACACCAAATTAGACCATGGCCCATTTCCAAC...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CAAGTTATCACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAAGAATTTCTGGCCACTaGCAAATGAAGCATACTGGC +
Preference number: 4 (lower is better)
Translates to: QVITMRKEQLSQLQWDNPRISGH*QMKHTG
Trigger: GCCAGTATGCTTCATTTGCCAGTGGCCAGAAATTCT...TGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGTGATAACTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp CTTCTTGGATTTGCCTTCATGAGAAAATGGTGGCTTGGGATGGAGGTGACATTCTGTACAACAGTAAGATaGTCAATCCCTGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: LLGFAFMRKWWLGMEVTFCTTVR*SIPVCY
Trigger: GTAACAGACAGGGATTGACCATCTTACTGTTGTACA...GAATGTCACCTCCATCCCAAGCCACCATTTTCTCATGAAGGCAAATCCAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CCA 90 bp AATGTGCTAAATAAGCCTCTTACCCACCTGCTGCCACCTTCTAGGCTCTACCTCATAACAATCACATTCTaGATTCTACAAAATCCTGGC +
Preference number: 4 (lower is better)
Translates to: NVLNKPLTHLLPPSRLYLITITF*ILQNPG
Trigger: GCCAGGATTTTGTAGAATCCAGAATGTGATTGTTAT...GAGGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCTTATTTAGCACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTCTTTGAGACGGGACTaGAATTCAAAGAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCSLRRD*NSKSND
Trigger: ATCATTGCTCTTTGAATTCCAGTCCCGTCTCAAAGA...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp AATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTCTTTCCTCTCCTCATTaGCTACAGTTACAAATAGTA +
Preference number: 4 (lower is better)
Translates to: NPTPPATCTTVRWSIPVCLSSPH*LQLQIV
Trigger: TACTATTTGTAACTGTAGTCAATGAGGAGAGGAAAG...ACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR GCA 90 bp TACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: YKHHAVCASRAALKTITKGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...CTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp GCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTCACGTTCCTTGATAGCCGTCTGTaGCATGGCTCTTGTTGTAAA +
Preference number: 4 (lower is better)
Translates to: AQNFKFTWFSLRSVCFTFLDSRL*HGSCCK
Trigger: TTTACAACAAGAGCCATGGCACAGACGGCTATCAAG...GAACGTGAAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAATCCCCACACAGATGCTaGGCTGATTTGCTGCATCTG +
Preference number: 4 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKSPHRC*ADLLHL
Trigger: CAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGA...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAATATATTGGCAAACACTaGTTCTCAATACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQYIGKH*FSIHRK
Trigger: CTTCCTGTGTATTGAGAAGCAGTGTTTGCCAATATA...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGTTCAGACCAGGTCCTTaGAACCTGGCCCACAAACAT +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWFRPGP*NLAHKH
Trigger: ATGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAA...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ATGACAAGGAGAGAGCCCCCATCTGACTTAATAGCAAACCAACCCCTTTATTCTTGTACAACAGTAAGATaGTCAATCCCTGTCTGTTAC +
Preference number: 4 (lower is better)
Translates to: MTRREPPSDLIANQPLYSCTTVR*SIPVCY
Trigger: GTAACAGACAGGGATTGACCATCTTACTGTTGTACA...AGAATAAAGGGGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTCCTTGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR TCA 90 bp TTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAGCACAATTGTCTGCTTGTCTATaGAAACCTTGGCAGACACGA +
Preference number: 4 (lower is better)
Translates to: FKYFPFSSRSSKTNLAAQLSACL*KPWQTR
Trigger: TCGTGTCTGCCAAGGTTTTCATAGACAAGCAGACAA...TTGTGCTGCCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp TCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTATGTTTGTTTGGGGCAAATCCTaGTCATCGTCTGTGTTAAAT +
Preference number: 4 (lower is better)
Translates to: SQCAEFQVYVVQLKKCMFVWGKS*SSSVLN
Trigger: ATTTAACACAGACGATGATCAGGATTTGCCCCAAAC...AAACATACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGATGGTCTGTGCTTGGTaGATTGCCTTGATAGCCGTC +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLMVCAW*IALIAV
Trigger: GACGGCTATCAAGGCAATGCACCAAGCACAGACCAT...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGTGTTTCTATTCCCAACACTaGATGCTTATGACTCATGAG +
Preference number: 4 (lower is better)
Translates to: HFSQCAEFQVYVVQLKKCFYSQH*MLMTHE
Trigger: CTCATGAGTCATAAGCATGCAGTGTTGGGAATAGAA...ACACTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532048.5
CDS-3UTR TCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGTTTGGACGATGTACTTaGCGCCACATCGACATGCTT +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLFGRCT*RHIDML
Trigger: AAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAA...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp CTTAATAGCAAACCAACCCCTTTATTCTTATCTCTGCTGCTAGGGGTCAAGACTGGATGTCATTTTCAGTaGACTTCTTGGAAATCATAC +
Preference number: 4 (lower is better)
Translates to: LNSKPTPLFLSLLLGVKTGCHFQ*TSWKSY
Trigger: GTATGATTTCCAAGAAGTGCACTGAAAATGACATCC...AGTCTTGACCCCTAGCAGCAGAGATAAGAATAAAGGGGTTGGTTTGCTATTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR GCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGACGCTCAGTAGGGCTTaGTGTCATTCTTCGAACGTT +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLTLSRA*CHSSNV
Trigger: AACGTTCGAAGAATGACAGCAAGCCCTACTGAGCGT...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR GCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGACGCCACATCGACATaGTTTAGGCACAACGATGAA +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLDATST*FRHNDE
Trigger: TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGCAAATTTTACCACCATaGGTGATGAGCAACCCTCCA +
Preference number: 4 (lower is better)
Translates to: NASLNISPSAVVLAKPIWQILPP*VMSNPP
Trigger: TGGAGGGTTGCTCATCACCCATGGTGGTAAAATTTG...CCAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGAGCATTGGTACCACTTaGTGTGTTCTGAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLSIGTT*CVLSCT
Trigger: AGTGCAGCTCAGAACACACCAAGTGGTACCAATGCT...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGGAAGAGACAGGGATTTaGACGATGTACTTGACGCCA +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLEETGI*TMYLTP
Trigger: TGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp ACACATTTCTCCCAGTGCGCAGAATTTCAAGTTTACGTGGTTCAGCTTAAGAAGCCAACATTTGGCATTTaGTTTTATCCACAGGTTTTC +
Preference number: 4 (lower is better)
Translates to: THFSQCAEFQVYVVQLKKPTFGI*FYPQVF
Trigger: GAAAACCTGTGGATAAAACCAAATGCCAAATGTTGG...CTTCTTAAGCTGAACCACGTAAACTTGAAATTCTGCGCACTGGGAGAAATGTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CCA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAACTGTCCCAGCTTCAATaGGATAATCCAACACCACCA +
Preference number: 4 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKLSQLQ*DNPTPP
Trigger: TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAG...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR GCA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAATTCGAACGTTTGAGCTaGACTTTAAGCCGCTTCATG +
Preference number: 4 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKFERLS*TLSRFM
Trigger: CATGAAGCGGCTTAAAGTGCAGCTCAAACGTTCGAA...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR TCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGTATCCCTTAGGACGTTaGTTTCATACACAGCACCAT +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLYPLGR*FHTQHH
Trigger: ATGGTGCTGTGTATGAAATCAACGTCCTAAGGGATA...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR TCA 90 bp AAATGCAAGTTTAAATATTTCCCCTTCAGCAGTCGTTCTAGCAAAACCAATTTGCTAGTAGGGCTGCTCTaGAGACAATTACAAAGAATT +
Preference number: 4 (lower is better)
Translates to: KCKFKYFPFSSRSSKTNLLVGLL*RQLQRI
Trigger: AATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAG...CAAATTGGTTTTGCTAGAACGACTGCTGAAGGGGAAATATTTAAACTTGCATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CCA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAATCTTTGAGACGGGACTaGAATTCAAAGAGCAATGAT +
Preference number: 4 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKSLRRD*NSKSND
Trigger: ATCATTGCTCTTTGAATTCCAGTCCCGTCTCAAAGA...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS TCA 90 bp CAGTTGCTGCCTGCGCCTCCGCAGCCGCCGCCGCCGCCTCGCTGCTaGGGCCGAATCCCGGGGGAGCCTCCGCGTCCCGCCGCCGCTGCC +
Preference number: 5 (lower is better)
Translates to: QLLPAPPQPPPPPRC*GRIPGEPPRPAAAA
Trigger: GGCAGCGGCGGCGGGACGCGGAGGCTCCCCCGGGATTCGGCCTCAGCAGCGAGGCGGCGGCGGCGGCTGCGGAGGCGCAGGCAGCAACTG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000531165.5
CDS GCA 90 bp CAGCCAGCGGCTGCACCTGAGCCTGCCGCTGCCTCAGTTGCTGCCTaGGCCTCCGCAGCCGCCGCCGCCGCCTCGCTGCTGAGGCCGAAT +
Preference number: 5 (lower is better)
Translates to: QPAAAPEPAAASVAA*ASAAAAAASLLRPN
Trigger: ATTCGGCCTCAGCAGCGAGGCGGCGGCGGCGGCTGCGGAGGCGCAGGCAGCAACTGAGGCAGCGGCAGGCTCAGGTGCAGCCGCTGGCTG
74% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS GCA 90 bp GGGGGCCTCAGTTTCCCACGCTACAGGGCTCACACGTGTCTGGCCTaGGACGCGCTCTCCCTTCGCCGGGGTCCCAGTTTCCCGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GGLSFPRYRAHTCLA*DALSLRRGPSFPPR
Trigger: CCTGGGCGGGAAACTGGGACCCCGGCGAAGGGAGAGCGCGTCGCAGGCCAGACACGTGTGAGCCCTGTAGCGTGGGAAACTGAGGCCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525841.5
ENST00000526419.1
ENST00000530151.5
CDS CCA 90 bp CAGGCGGGGGCCTCAGTTTCCCACGCTACAGGGCTCACACGTGTCTaGCCTGCGACGCGCTCTCCCTTCGCCGGGGTCCCAGTTTCCCGC +
Preference number: 5 (lower is better)
Translates to: QAGASVSHATGLTRV*PATRSPFAGVPVSR
Trigger: GCGGGAAACTGGGACCCCGGCGAAGGGAGAGCGCGTCGCAGGCCAGACACGTGTGAGCCCTGTAGCGTGGGAAACTGAGGCCCCCGCCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000525841.5
ENST00000526419.1
ENST00000530151.5
CDS TCA 90 bp GGTGGTCCAGGGTGCCGTTCATTTTCTTTGAGCAGCGGCTGCACCTaGGCCTGCCGCTGCCTCAGTTGCTGCCTGCGCCTCCGCAGCCGC +
Preference number: 5 (lower is better)
Translates to: GGPGCRSFSLSSGCT*ACRCLSCCLRLRSR
Trigger: GCGGCTGCGGAGGCGCAGGCAGCAACTGAGGCAGCGGCAGGCTCAGGTGCAGCCGCTGCTCAAAGAAAATGAACGGCACCCTGGACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CAA 90 bp CCCTCTCTGAGCAAAGCAGCCAGCCTCCCGGAAGCCCCGGTAAGACCTGGAGGCGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PSLSKAASLPEAPVRPGGVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...GCCTCCAGGTCTTACCGGGGCTTCCGGGAGGCTGGCTGCTTTGCTCAGAGAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS TCA 90 bp CGTAAGAACACAAACTGTGTGCCCTGGCTGAGTCCTGAGCAGGTCTaGGCCGGTGCGGGTGCCAAAGGGTGGCCACACGGCCTAGCTAGT +
Preference number: 5 (lower is better)
Translates to: RKNTNCVPWLSPEQV*AGAGAKGWPHGLAS
Trigger: ACTAGCTAGGCCGTGTGGCCACCCTTTGGCACCCGCACCGGCTCAGACCTGCTCAGGACTCAGCCAGGGCACACAGTTTGTGTTCTTACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528538.5
ENST00000543178.5
CDS-3UTR CAA 90 bp AGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: SLSASCQQRRLCAVRLWGAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...ACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGCAGGTGAATTGCCGCTaGGTGTGCAGATGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRQVNCR*VCRWPP
Trigger: AGGAGGCCATCTGCACACCAAGCGGCAATTCACCTG...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS TCA 90 bp ACAGACAGATGGATGCACGTAAGAACACAAACTGTGTGCCCTGGCTaGGTCCTGAGCAGGTCTGAGCCGGTGCGGGTGCCAAAGGGTGGC +
Preference number: 5 (lower is better)
Translates to: TDRWMHVRTQTVCPG*VLSRSEPVRVPKGG
Trigger: GCCACCCTTTGGCACCCGCACCGGCTCAGACCTGCTCAGGACTCAGCCAGGGCACACAGTTTGTGTTCTTACGTGCATCCATCTGTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528538.5
ENST00000543178.5
CDS-3UTR CAA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACCTGCCGCTGCCTCAGTaGCTGCCTGCGCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHLPLPQ*LPAPPQ
Trigger: CTGCGGAGGCGCAGGCAGCAACTGAGGCAGCGGCAG...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000310513.10
CDS-3UTR CAA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTATTAACACCTTCCCCTaGGGCAGGTTAGCTGGGCTG +
Preference number: 5 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFINTFP*GRLAGL
Trigger: CAGCCCAGCTAACCTGCCCAAGGGGAAGGTGTTAAT...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: EGSSRVFRASCARRPSHSAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACCATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCACGCAGCAGCAGCATATaGCTGGATACCCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPRSSSI*LDTRVG
Trigger: GCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCG...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCATTTGGACGATGTACTaGACGCCACATCGACATGCT +
Preference number: 5 (lower is better)
Translates to: VPPANRGGSVQSDCGVHSIWTMY*TPHRHA
Trigger: AGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT...GCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGACTCAGTCCTCTCTCTaGGGGTGGTTTGGGGCAAAT +
Preference number: 5 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRTQSSL*GWFGAN
Trigger: ATTTGCCCCAAACCACCCCAAGAGAGAGGACTGAGT...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp GGAGGAGAGAACAGAGAAGTGCATGGTCTCACCAGCTGGCTGCTCAAGCAGCCCCTCCATGGTCTGTGCTaGGTGCATTGCCTTGATAGC +
Preference number: 5 (lower is better)
Translates to: GGENREVHGLTSWLLKQPLHGLC*VHCLDS
Trigger: GCTATCAAGGCAATGCACCAAGCACAGACCATGGAG...GGGCTGCTTGAGCAGCCAGCTGGTGAGACCATGCACTTCTCTGTTCTCTCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCAAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPRCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp CTGTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: LCVHRNTNTTRYVLVGLLVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...GAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp CTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCCTGGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: LNRATSAQVYIPNSMSFLGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...CAGGAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp AGCCTCAGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTATAGAAACGACATTCTaGGTTCCAGCCGGTTGGGAT +
Preference number: 5 (lower is better)
Translates to: SLSASCQQRRLCAVRLWGIETTF*VPAGWD
Trigger: ATCCCAACCGGCTGGAACCAAGAATGTCGTTTCTAT...ACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp AGATGGCCTCCTACGGGTGATTGGGAGCGCCCTCCTTCCTCCAGGTGCTCACTGTGGCCCACAAACATCTaGATAGCATCAAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: RWPPTGDWERPPSSRCSLWPTNI*IASRSG
Trigger: ACCAGATCTTGATGCTATCAAGATGTTTGTGGGCCA...CAGTGAGCACCTGGAGGAAGGAGGGCGCTCCCAATCACCCGTAGGAGGCCATCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGCATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp CATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGTCCTTCGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: HLNRATSAQVYIPNSMSFAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...GAAGGACATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GCGAAACTCCCACAGAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGTCAGAAGATTCTGGTaGTACAGAGTGGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: AKLPQKAVAESSGQAVPEVRRFW*YRVGSA
Trigger: TGCGCTCCCCACTCTGTACAACCAGAATCTTCTGAC...TTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTCTGTGGGAGTTTCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS TCA 90 bp GCATTGCATTCAACCCTCCCATTGGGTGGAGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAGTCTGCTGAAGGAGTGCTAAATACT +
Preference number: 5 (lower is better)
Translates to: ALHSTLPLGGGCSGC*GSQRRQSAEGVLNT
Trigger: AGTATTTAGCACTCCTTCAGCAGACTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATGCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000310513.10
ENST00000361904.7
ENST00000395292.6
CDS TCA 90 bp GCATTGCATTCAACCCTCCCATTGGGTGGAGGCTGCTCAGGGTGTTaGGGTTCCCAGAGGAGGCAGTCTGCTGAAGGAGCTGCAAATAAA +
Preference number: 5 (lower is better)
Translates to: ALHSTLPLGGGCSGC*GSQRRQSAEGAANK
Trigger: TTTATTTGCAGCTCCTTCAGCAGACTGCCTCCTCTGGGAACCTCAACACCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATGCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358597.7
ENST00000395290.6
ENST00000422993.2
ENST00000531165.5
ENST00000532048.5
CDS GCA 90 bp GCCAAAGAGCCAACATTGAGGCCAGCCGTTGCTCCAGCTAATGTCTaGAGGGCTCCAAGTGAGGCTATGGGGTTGACAGAATTACTGCTG +
Preference number: 5 (lower is better)
Translates to: AKEPTLRPAVAPANV*RAPSEAMGLTELLL
Trigger: CAGCAGTAATTCTGTCAACCCCATAGCCTCACTTGGAGCCCTGCAGACATTAGCTGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
ENST00000531165.5
ENST00000532048.5
ENST00000534614.1
ENST00000539254.1
CDS-3UTR CAA 90 bp AACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGTTTCAGACCAGGTCCTaGGAACCTGGCCCACAAACA +
Preference number: 5 (lower is better)
Translates to: NKRQESEDPLTPVSEGSTFQTRS*EPGPQT
Trigger: TGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAA...CGTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp TGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCCATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: CFRHNDEQTAGIRRPSHSHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...GGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGACATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp CCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACAGCACATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PGWFGVGPSQHTLVTNTAHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...TGCTGTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp CCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGCATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: PPATCTTVRWSIPVCYPQHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...CTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCAGTGAGGCTATGGGGTaGACAGAATTACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: EGSSRVFRASCARRPSHSSEAMG*TELLLL
Trigger: TAGCAGCAGTAATTCTGTCAACCCCATAGCCTCACT...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp GATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAAGTGCTCCCGGTGCCATaGGAAAGGCCACTGCTGCCC +
Preference number: 5 (lower is better)
Translates to: DLDDVLDATSTCFRHNDEVLPVP*ERPLLP
Trigger: GGGCAGCAGTGGCCTTTCCAATGGCACCGGGAGCAC...TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACGTCAGAAGATTCTGGTaGTACAGAGTGGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHVRRFW*YRVGSA
Trigger: TGCGCTCCCCACTCTGTACAACCAGAATCTTCTGAC...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACAGCGCCAGCAGGTGAATaGCCGCTTGGTGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTAPAGE*PLGVQM
Trigger: CATCTGCACACCAAGCGGCAATTCACCTGCTGGCGC...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp AGTGCCTCCTGCCAACAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGGTGAAGACTGTAGTATaGTGCTTGTCACCTAGGAAA +
Preference number: 5 (lower is better)
Translates to: SASCQQRRLCAVRLWGAQVKTVV*CLSPRK
Trigger: TTTCCTAGGTGACAAGCACAATACTACAGTCTTCAC...CTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTGTTGGCAGGAGGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp GTGTGTTCACAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGCCAGGCAGAGCGGCCTaGGGCATAATACCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: VCSQKYKHHAVCASRAALPGRAA*GIIPGN
Trigger: GTTGCCTGGTATTATGCCCAAGGCCGCTCTGCCTGG...CAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTGTGAACACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGTGGGCGGGCAGGGGTaGGGTAATGACAGGGAACTT +
Preference number: 5 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNVGGQG*GNDREL
Trigger: AAGTTCCCTGTCATTACCCAACCCCTGCCCGCCCAC...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS CCA 90 bp CAGCACCAATACTCTGCTGTGTCAGAAGATTCTGGTTGTACAGAGTaGGGAGCGCAGCAGCAGCATATTGCTGGATACCCGAGTAGGCCT +
Preference number: 5 (lower is better)
Translates to: QHQYSAVSEDSGCTE*GAQQQHIAGYPSRP
Trigger: AGGCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCGCTCCCCACTCTGTACAACCAGAATCTTCTGACACAGCAGAGTATTGGTGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
ENST00000531165.5
ENST00000532048.5
ENST00000539254.1
ENST00000539455.5
CDS-3UTR CAA 90 bp ATCACTCTGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: ITLPTNGTPFSKNCKPFLRCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...CAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCCATTCAACCCTCCCATaGGGTGGAGGCTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPHSTLP*GGGCSG
Trigger: CCCTGAGCAGCCTCCACCCAATGGGAGGGTTGAATG...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACACGCAGCAGCAGCATATaGCTGGATACCCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTRSSSI*LDTRVG
Trigger: GCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCG...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGCGCAGCAGCAGCATATaGCTGGATACCCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTRSSSI*LDTRVG
Trigger: GCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCG...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACCGCAGCAGCAGCATATaGCTGGATACCCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNRSSSI*LDTRVG
Trigger: GCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCG...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAAGGCAGTAGCCGAGTCTTCAGGGCAAGCTGTGCCAGAAGACCCTCTCACTCCTTGTCTATGAAAACCTaGGCAGACACGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: EGSSRVFRASCARRPSHSLSMKT*ADTTFP
Trigger: TGGGAATGTCGTGTCTGCCAAGGTTTTCATAGACAA...GGAGTGAGAGGGTCTTCTGGCACAGCTTGCCCTGAAGACTCGGCTACTGCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp GACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: DATSTCFRHNDEQTAGIRGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...TCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: LDATSTCFRHNDEQTAGIGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCCAGGTGAATTGCCGCTaGGTGTGCAGATGGCCTCCT +
Preference number: 5 (lower is better)
Translates to: EETGIWTMYLTPHRHALGQVNCR*VCRWPP
Trigger: AGGAGGCCATCTGCACACCAAGCGGCAATTCACCTG...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp ATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGCGCCAGCAGGTGAATaGCCGCTTGGTGTGCAGATG +
Preference number: 5 (lower is better)
Translates to: MYLTPHRHALGTTMNKRQAPAGE*PLGVQM
Trigger: CATCTGCACACCAAGCGGCAATTCACCTGCTGGCGC...CTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp GAACACTCAATTCATGTGGAGGCTGTAAACGTCCTGATGTCACCTCTGCCTCAACCAGGCAGAGCGGCCTaGGGCATAATACCAGGCAAC +
Preference number: 5 (lower is better)
Translates to: EHSIHVEAVNVLMSPLPQPGRAA*GIIPGN
Trigger: GTTGCCTGGTATTATGCCCAAGGCCGCTCTGCCTGG...TTGAGGCAGAGGTGACATCAGGACGTTTACAGCCTCCACATGAATTGAGTGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp CCCATCCCTGGCTGTGGCTACAGTCACATCTTAACAGGGCCACCTCTGCCCAGGGGTCAAGACTGGTATTaGTTGAGGTTTCAGATTCCA +
Preference number: 5 (lower is better)
Translates to: PIPGCGYSHILTGPPLPRGQDWY*LRFQIP
Trigger: TGGAATCTGAAACCTCAACAAATACCAGTCTTGACC...CCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTGTAGCCACAGCCAGGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS TCA 90 bp CAAGAGTATTTAGACCAGCAAGGTTTCCCCACACAGATGCTGCGCTaGTTTGCTGCATCTGCTGCTGGAGCTGCTGGGCCATTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: QEYLDQQGFPTQMLR*FAASAAGAAGPFSS
Trigger: AGAAGAGAATGGCCCAGCAGCTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCTGTGTGGGGAAACCTTGCTGGTCTAAATACTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
ENST00000422993.2
ENST00000531165.5
ENST00000532048.5
ENST00000532146.1
CDS-3UTR CAA 90 bp GACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACAGCATCAAGATCTGGTaGGTCTGGGTGGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: DRDLDDVLDATSTCFRHNSIKIW*VWVVQG
Trigger: ACCCTGGACCACCCAGACCAACCAGATCTTGATGCT...GTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGTGGCCCACAAACATCTaGATAGCATCAAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRWPTNI*IASRSG
Trigger: ACCAGATCTTGATGCTATCAAGATGTTTGTGGGCCA...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp CAGAAGCTGTGTGGGTCACAGGCAAGAGCTGAAGTAAGACCTGCAAGAGGCGGCCTATCCCTTAGGACGTaGATTTCATACACAGCACCA +
Preference number: 5 (lower is better)
Translates to: QKLCGSQARAEVRPARGGLSLRT*ISYTAP
Trigger: TGGTGCTGTGTATGAAATCAACGTCCTAAGGGATAG...GCCGCCTCTTGCAGGTCTTACTTCAGCTCTTGCCTGTGACCCACACAGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: EETGIWTMYLTPHRHALGAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp AATGTGCTAAATAAGCCTCTTACCCACCTGCTGCCACCTTCTAGGCTCTACCTCGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: NVLNKPLTHLLPPSRLYLAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...GAGGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCTTATTTAGCACATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGGAGCATTGGTACCACTaGGTGTGTTCTGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWEHWYH*VCSELH
Trigger: GTGCAGCTCAGAACACACCAAGTGGTACCAATGCTC...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: YLTPHRHALGTTMNKRQEAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGCGCAGCAGCAGCATATaGCTGGATACCCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: HHAVCASRAALKTITKNWRSSSI*LDTRVG
Trigger: GCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCG...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GCTGGTGCCCAGGGCTGTAAACAGTGTGAAGACTGTAGTATTGTGCTTGTCACCGTCAGAAGATTCTGGTaGTACAGAGTGGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: AGAQGCKQCEDCSIVLVTVRRFW*YRVGSA
Trigger: TGCGCTCCCCACTCTGTACAACCAGAATCTTCTGAC...GGTGACAAGCACAATACTACAGTCTTCACACTGTTTACAGCCCTGGGCACCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGGTCAGAAGATTCTGGTaGTACAGAGTGGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWVRRFW*YRVGSA
Trigger: TGCGCTCCCCACTCTGTACAACCAGAATCTTCTGAC...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGGAGAGAGCCCCCATTGTCTATGAAAACCTaGGCAGACACGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: GQSLSVTHRDSMTRREPPLSMKT*ADTTFP
Trigger: TGGGAATGTCGTGTCTGCCAAGGTTTTCATAGACAA...TGGGGGCTCTCTCCTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp ACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: TPHRHALGTTMNKRQESEGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...TTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp CGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGGGGTTTTTCCCAGAGCTCCTCTaGGAATTGAAAGCAAAATAT +
Preference number: 5 (lower is better)
Translates to: RLCAVRLWGAQQSLRLGFFPELL*ELKAKY
Trigger: ATATTTTGCTTTCAATTCCAAGAGGAGCTCTGGGAA...AAACCCCAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp CAGAGGCGGCTCTGTGCAGTCAGACTGTGGGGTGCACAGCAGTCTCTCAGGCTGTCCAACATTTGGCATTaGGTTTTATCCACAGGTTTT +
Preference number: 5 (lower is better)
Translates to: QRRLCAVRLWGAQQSLRLSNIWH*VLSTGF
Trigger: AAAACCTGTGGATAAAACCAAATGCCAAATGTTGGA...CAGCCTGAGAGACTGCTGTGCACCCCACAGTCTGACTGCACAGAGCCGCCTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000310513.10
ENST00000395290.6
CDS-3UTR CAA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACACAATAGGGATACAATaGGGAAGAGACACACGAGGG +
Preference number: 5 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHTIGIQ*GRDTRG
Trigger: CCCTCGTGTGTCTCTTCCCAATTGTATCCCTATTGT...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395292.6
CDS-3UTR CAA 90 bp AGGGGCCTGCCAGACCCCTGTGGGAATACTACATCTGGGACACCTCAATCAAGGTTCCTGTCTTCCACATaGTTCTTCTCACTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: RGLPDPCGNTTSGTPQSRFLSST*FFSLSA
Trigger: TGCTGACAGTGAGAAGAACAATGTGGAAGACAGGAA...CCTTGATTGAGGTGTCCCAGATGTAGTATTCCCACAGGGGTCTGGCAGGCCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp ACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACAGCATCAAGATCTGGTaGGTCTGGGTGGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: TCFRHNDEQTAGIRRPSHSIKIW*VWVVQG
Trigger: ACCCTGGACCACCCAGACCAACCAGATCTTGATGCT...GTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp GACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGAGCATCAAGATCTGGTaGGTCTGGGTGGTCCAGGGT +
Preference number: 5 (lower is better)
Translates to: DDVLDATSTCFRHNDEQTSIKIW*VWVVQG
Trigger: ACCCTGGACCACCCAGACCAACCAGATCTTGATGCT...CGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTTTTCAGACCAGGTCCTaGGAACCTGGCCCACAAACA +
Preference number: 5 (lower is better)
Translates to: ERNSCPSFNGIIQHHQLPFQTRS*EPGPQT
Trigger: TGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAA...AGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp CACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTACAAAGAATTGGAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: HHAVCASRAALKTITKNWRCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...CCAATTCTTTGTAATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TPHRHALGTTMNKRQESERCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...TTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp ACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: TMYLTPHRHALGTTMNKRRCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...CCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp TTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: FRHNDEQTAGIRRPSHSSRCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...ACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCGAGCATTGGTACCACTaGGTGTGTTCTGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: LDATSTCFRHNDEQTAGIEHWYH*VCSELH
Trigger: GTGCAGCTCAGAACACACCAAGTGGTACCAATGCTC...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp CAGTCACATCTTAACAGGGCCACCTCTGCCCAGGTGTACATTCCCAACAGCATGGATGTAGTGAGAGCATaGGTACCACTTGGTGTGTTC +
Preference number: 5 (lower is better)
Translates to: QSHLNRATSAQVYIPNSMDVVRA*VPLGVF
Trigger: GAACACACCAAGTGGTACCAATGCTCTCACTACATC...CATGCTGTTGGGAATGTACACCTGGGCAGAGGTGGCCCTGTTAAGATGTGACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp TCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGTCTGTTAGCCAAAGAGCCAACATaGAGGCCAGCCGTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: SNTTSYLYNSKMVNPCLLAKEPT*RPAVAP
Trigger: TGGAGCAACGGCTGGCCTCAATGTTGGCTCTTTGGC...TAACAGACAGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACGCAGCAGCAGCATATaGCTGGATACCCGAGTAGGC +
Preference number: 5 (lower is better)
Translates to: DLDDVLDATSTCFRHNDERSSSI*LDTRVG
Trigger: GCCTACTCGGGTATCCAGCAATATGCTGCTGCTGCG...TTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAGTCAGAAGATTCTGGTaGTACAGAGTGGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: ETGIWTMYLTPHRHALGTVRRFW*YRVGSA
Trigger: TGCGCTCCCCACTCTGTACAACCAGAATCTTCTGAC...TGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAACAAACGGCAGGAATCAGAAGACCCTCTCACTCCAGTCTCAGAGGGGAGCACTTGTCTATGAAAACCTaGGCAGACACGACATTCCCA +
Preference number: 5 (lower is better)
Translates to: EQTAGIRRPSHSSLRGEHLSMKT*ADTTFP
Trigger: TGGGAATGTCGTGTCTGCCAAGGTTTTCATAGACAA...GTGCTCCCCTCTGAGACTGGAGTGAGAGGGTCTTCTGATTCCTGCCGTTTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp TGGGATAATCCAACACCACCAGCTACCTGTACAACAGTAAGATGGTCAATCCCTGGACTGGATGGCAGCTaGGGCCGAAACAGGATTGTC +
Preference number: 5 (lower is better)
Translates to: WDNPTPPATCTTVRWSIPGLDGS*GRNRIV
Trigger: GACAATCCTGTTTCGGCCCAAGCTGCCATCCAGTCC...AGGGATTGACCATCTTACTGTTGTACAGGTAGCTGGTGGTGTTGGATTATCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp CCCCAACTAGATGGTATTGATCACTCTGCCCACAAATGGTACCCCCTTCAGCAACAGGGTGGTTTGGTGTaGGTCCTTCTCAACACACAC +
Preference number: 5 (lower is better)
Translates to: PQLDGIDHSAHKWYPLQQQGGLV*VLLNTH
Trigger: GTGTGTGTTGAGAAGGACCAACACCAAACCACCCTG...TTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGATCAATACCATCTAGTTGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp TTCCCCAGGGTGGTTTGGTGTTGGTCCTTCTCAACACACACTGGTTACAAACACCAGGGTGGTTTGGTGTaGGTCCTTCTCAACACACAC +
Preference number: 5 (lower is better)
Translates to: FPRVVWCWSFSTHTGYKHQGGLV*VLLNTH
Trigger: GTGTGTGTTGAGAAGGACCAACACCAAACCACCCTG...GTGTTTGTAACCAGTGTGTGTTGAGAAGGACCAACACCAAACCACCCTGGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp ACAACAGTAAGATGGTCAATCCCTGTCTGTTACCCACAGGGACAGCATGACAAGCTTCCCCAGGGTGGTTaGGTGTTGGTCCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: TTVRWSIPVCYPQGQHDKLPQGG*VLVLLN
Trigger: GTTGAGAAGGACCAACACCAAACCACCCTGGGGAAG...CTTGTCATGCTGTCCCTGTGGGTAACAGACAGGGATTGACCATCTTACTGTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp GAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCAGCTACCTGTACACTCTCTTGGGGTGGTTaGGGGCAAATCCTGATCATC +
Preference number: 5 (lower is better)
Translates to: EQLSQLQWDNPTPPATCTLSWGG*GQILII
Trigger: GATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG...TGTACAGGTAGCTGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTCTTGGTTCCAGCCGGTaGGGATTCAGAACAGCGCCT +
Preference number: 5 (lower is better)
Translates to: QKYKHHAVCASRAALKTILGSSR*GFRTAP
Trigger: AGGCGCTGTTCTGAATCCCAACCGGCTGGAACCAAG...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp TCTTTCCATCCAATCACCCCTTCCAGGAAATTCAGCAGCCTACCAGACACTGGGTCAAAGGTGGGTGGATaGCACCTTGGCCTCTTATGT +
Preference number: 5 (lower is better)
Translates to: SFHPITPSRKFSSLPDTGSKVGG*HLGLLC
Trigger: ACATAAGAGGCCAAGGTGCAATCCACCCACCTTTGA...CCCAGTGTCTGGTAGGCTGCTGAATTTCCTGGAAGGGGTGATTGGATGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS TCA 90 bp ACCCTTTGCTCTGAGGCGGGTTTTGGCTCCTATCCCTTAGGACGTTaGTTTCATACACAGCACCATACTGTTCGAAGAGTTCCCGCAAGT +
Preference number: 5 (lower is better)
Translates to: TLCSEAGFGSYPLGR*FHTQHHTVRRVPAS
Trigger: ACTTGCGGGAACTCTTCGAACAGTATGGTGCTGTGTATGAAATCAACGTCCTAAGGGATAGGAGCCAAAACCCGCCTCAGAGCAAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
ENST00000525841.5
ENST00000528434.5
ENST00000530151.5
ENST00000531165.5
ENST00000532048.5
ENST00000535982.1
ENST00000543178.5
CDS CCA 90 bp ATGCCACTGTGTTTGTTGGCTAGGGACAGCAGAAGAAGGAACAGCTaGGAGCTTGCACAGTCTGCAGAAAGCAAACCACAAAGACTCACT +
Preference number: 5 (lower is better)
Translates to: MPLCLLARDSRRRNS*ELAQSAESKPQRLT
Trigger: AGTGAGTCTTTGTGGTTTGCTTTCTGCAGACTGTGCAAGCTCCCAGCTGTTCCTTCTTCTGCTGTCCCTAGCCAACAAACACAGTGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532146.1
CDS-3UTR CAA 90 bp TTGAAAAGAGCAGCAGAAATTCCGGACAAGAATCTGAAAAATAGGTGTCAAAAACTGCCGCTGCCTCAGTaGCTGCCTGCGCCTCCGCAG +
Preference number: 5 (lower is better)
Translates to: LKRAAEIPDKNLKNRCQKLPLPQ*LPAPPQ
Trigger: CTGCGGAGGCGCAGGCAGCAACTGAGGCAGCGGCAG...TTTTTGACACCTATTTTTCAGATTCTTGTCCGGAATTTCTGCTGCTCTTTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531165.5
CDS-3UTR CAA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCTTTCAGACCAGGTCCTaGGAACCTGGCCCACAAACA +
Preference number: 5 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPFQTRS*EPGPQT
Trigger: TGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAA...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp ACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGAAGACCCCTCCATGGTCTGTGCTaGGTGCATTGCCTTGATAGC +
Preference number: 5 (lower is better)
Translates to: TSTCFRHNDEQTAGIRRPLHGLC*VHCLDS
Trigger: GCTATCAAGGCAATGCACCAAGCACAGACCATGGAG...GGGTCTTCTGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp TACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAAGAGCATTGGTACCACTaGGTGTGTTCTGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: YLTPHRHALGTTMNKRQEEHWYH*VCSELH
Trigger: GTGCAGCTCAGAACACACCAAGTGGTACCAATGCTC...TTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTAGAGCATTGGTACCACTaGGTGTGTTCTGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVEHWYH*VCSELH
Trigger: GTGCAGCTCAGAACACACCAAGTGGTACCAATGCTC...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp ATCACTCTGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATGTAGTGAGAGCATaGGTACCACTTGGTGTGTTC +
Preference number: 5 (lower is better)
Translates to: ITLPTNGTPFSKNCKPFLDVVRA*VPLGVF
Trigger: GAACACACCAAGTGGTACCAATGCTCTCACTACATC...CAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCAGAGTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp TTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGTCAGAAGATTCTGGTaGTACAGAGTGGGGAGCGCA +
Preference number: 5 (lower is better)
Translates to: LTPHRHALGTTMNKRQESVRRFW*YRVGSA
Trigger: TGCGCTCCCCACTCTGTACAACCAGAATCTTCTGAC...TGATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAACTTCCCCAGGGTGGTTaGGTGTTGGTCCTTCTCAAC +
Preference number: 5 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQLPQGG*VLVLLN
Trigger: GTTGAGAAGGACCAACACCAAACCACCCTGGGGAAG...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp ACCAAAGCACAAACTTGTCCTCTGTACGAAGCGAAACTCCCACAGAAGGCAGTACTCTCTTGGGGTGGTTaGGGGCAAATCCTGATCATC +
Preference number: 5 (lower is better)
Translates to: TKAQTCPLYEAKLPQKAVLSWGG*GQILII
Trigger: GATGATCAGGATTTGCCCCAAACCACCCCAAGAGAG...TACTGCCTTCTGTGGGAGTTTCGCTTCGTACAGAGGACAAGTTTGTGCTTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp TGCCCACAAATGGTACCCCCTTCAGCAAGAACTGCAAGCCCTTCTTGGATTTGCATGAAGCATACTGGCTaGCAGGGACCTTCTGATTCA +
Preference number: 5 (lower is better)
Translates to: CPQMVPPSARTASPSWICMKHTG*QGPSDS
Trigger: TGAATCAGAAGGTCCCTGCAAGCCAGTATGCTTCAT...GCAAATCCAAGAAGGGCTTGCAGTTCTTGCTGAAGGGGGTACCATTTGTGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000395290.6
ENST00000531165.5
CDS-3UTR CAA 90 bp AATGTGCTAAATAAGCCTCTTACCCACCTGCTGCCACCTTCTAGGCTCTACCTCTATGGGGATGGCCCTTaGTTCCCAGAAATCCAAGCT +
Preference number: 5 (lower is better)
Translates to: NVLNKPLTHLLPPSRLYLYGDGP*FPEIQA
Trigger: AGCTTGGATTTCTGGGAACAAAGGGCCATCCCCATA...GAGGTAGAGCCTAGAAGGTGGCAGCAGGTGGGTAAGAGGCTTATTTAGCACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp TATTTGTTGAGGTTTCAGATTCCAGAGACCCAGGGATCCCATCCCTGGCTGTGGTGGCCCACAAACATCTaGATAGCATCAAGATCTGGT +
Preference number: 5 (lower is better)
Translates to: YLLRFQIPETQGSHPWLWWPTNI*IASRSG
Trigger: ACCAGATCTTGATGCTATCAAGATGTTTGTGGGCCA...CCACAGCCAGGGATGGGATCCCTGGGTCTCTGGAATCTGAAACCTCAACAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp CAGAAATACAAACACCACGCGGTATGTGCTAGTAGGGCTGCTCTGAAGACAATTTTTCAGACCAGGTCCTaGGAACCTGGCCCACAAACA +
Preference number: 5 (lower is better)
Translates to: QKYKHHAVCASRAALKTIFQTRS*EPGPQT
Trigger: TGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAA...AATTGTCTTCAGAGCAGCCCTACTAGCACATACCGCGTGGTGTTTGTATTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACTTTCAGACCAGGTCCTaGGAACCTGGCCCACAAACA +
Preference number: 5 (lower is better)
Translates to: IWTMYLTPHRHALGTTMNFQTRS*EPGPQT
Trigger: TGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAA...GTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ACTATGAGAAAGGAACAGCTGTCCCAGCTTCAATGGGATAATCCAACACCACCATTTCAGACCAGGTCCTaGGAACCTGGCCCACAAACA +
Preference number: 5 (lower is better)
Translates to: TMRKEQLSQLQWDNPTPPFQTRS*EPGPQT
Trigger: TGTTTGTGGGCCAGGTTCCAAGGACCTGGTCTGAAA...TGGTGGTGTTGGATTATCCCATTGAAGCTGGGACAGCTGTTCCTTTCTCATAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp GTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGACTGTCTTCCACTGCATaGTTCTTCTCACTGTCAGCA +
Preference number: 5 (lower is better)
Translates to: VLDATSTCFRHNDEQTAGLSSTA*FFSLSA
Trigger: TGCTGACAGTGAGAAGAACAATGCAGTGGAAGACAG...TCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395292.6
CDS-3UTR CAA 90 bp AAACAAAGCCTAGAAACGGACTGGCTGTGTGTTCACAGAAATACAAACACCACGGCTTGGTGCATTGCCTaGATAGCCGTCTGTGCCATG +
Preference number: 5 (lower is better)
Translates to: KQSLETDWLCVHRNTNTTAWCIA*IAVCAM
Trigger: CATGGCACAGACGGCTATCAAGGCAATGCACCAAGC...CGTGGTGTTTGTATTTCTGTGAACACACAGCCAGTCCGTTTCTAGGCTTTGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp TGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACTCCATGGTCTGTGCTaGGTGCATTGCCTTGATAGC +
Preference number: 5 (lower is better)
Translates to: WTMYLTPHRHALGTTMNKLHGLC*VHCLDS
Trigger: GCTATCAAGGCAATGCACCAAGCACAGACCATGGAG...TTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp TTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAACTCCATGGTCTGTGCTaGGTGCATTGCCTTGATAGC +
Preference number: 5 (lower is better)
Translates to: LDDVLDATSTCFRHNDEQLHGLC*VHCLDS
Trigger: GCTATCAAGGCAATGCACCAAGCACAGACCATGGAG...TTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ATGACAAGGAGAGAGCCCCCATCTGACTTAATAGCAAACCAACCCCTTTATTCTAGATGCTGCGCTGATTaGCTGCATCTGCTGCTGGAG +
Preference number: 5 (lower is better)
Translates to: MTRREPPSDLIANQPLYSRCCAD*LHLLLE
Trigger: CTCCAGCAGCAGATGCAGCAAATCAGCGCAGCATCT...AGAATAAAGGGGTTGGTTTGCTATTAAGTCAGATGGGGGCTCTCTCCTTGTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000395290.6
ENST00000531165.5
ENST00000532048.5
CDS-3UTR CAA 90 bp ATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACGAGCATTGGTACCACTaGGTGTGTTCTGAGCTGCAC +
Preference number: 5 (lower is better)
Translates to: IWTMYLTPHRHALGTTMNEHWYH*VCSELH
Trigger: GTGCAGCTCAGAACACACCAAGTGGTACCAATGCTC...GTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GAAGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCGATGTAGTGAGAGCATaGGTACCACTTGGTGTGTTC +
Preference number: 5 (lower is better)
Translates to: EETGIWTMYLTPHRHALGDVVRA*VPLGVF
Trigger: GAACACACCAAGTGGTACCAATGCTCTCACTACATC...GCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGGATGTAGTGAGAGCATaGGTACCACTTGGTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTDVVRA*VPLGVF
Trigger: GAACACACCAAGTGGTACCAATGCTCTCACTACATC...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCAGTGAGGCTATGGGGTaGACAGAATTACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: LDATSTCFRHNDEQTAGISEAMG*TELLLL
Trigger: TAGCAGCAGTAATTCTGTCAACCCCATAGCCTCACT...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp AGAGACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAGTGAGGCTATGGGGTaGACAGAATTACTGCTGCTA +
Preference number: 5 (lower is better)
Translates to: RDRDLDDVLDATSTCFRHSEAMG*TELLLL
Trigger: TAGCAGCAGTAATTCTGTCAACCCCATAGCCTCACT...GTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp ACAGGGATTTGGACGATGTACTTGACGCCACATCGACATGCTTTAGGCACAACGTCATTCTTCGAACGTTaGAGCTGCACTTTAAGCCGC +
Preference number: 5 (lower is better)
Translates to: TGIWTMYLTPHRHALGTTSFFER*SCTLSR
Trigger: GCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAATGA...CGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAGTACATCGTCCAAATCCCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp GGCAGGTTAGCTGGGCTGCAAACGGGCCACAGAAAGTCAGTAGTTTCAATCATATCATTCTTCGAACGTTaGAGCTGCACTTTAAGCCGC +
Preference number: 5 (lower is better)
Translates to: GRLAGLQTGHRKSVVSIISFFER*SCTLSR
Trigger: GCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAATGA...TATGATTGAAACTACTGACTTTCTGTGGCCCGTTTGCAGCCCAGCTAACCTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000395290.6
CDS-3UTR CAA 90 bp CTTGACGCCACATCGACATGCTTTAGGCACAACGATGAACAAACGGCAGGAATCTCATTCTTCGAACGTTaGAGCTGCACTTTAAGCCGC +
Preference number: 5 (lower is better)
Translates to: LDATSTCFRHNDEQTAGISFFER*SCTLSR
Trigger: GCGGCTTAAAGTGCAGCTCAAACGTTCGAAGAATGA...GATTCCTGCCGTTTGTTCATCGTTGTGCCTAAAGCATGTCGATGTGGCGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000310513.10
ENST00000358597.7
ENST00000361904.7
ENST00000395290.6
ENST00000395292.6
CDS-3UTR CAA 90 bp