Pregenerated sensors for CECR9 (Homo sapiens)

Ensembl gene IDs: ENSG00000231004

Ensembl transcript IDs: ENST00000453421.1

Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	CGCAGCAGTTGTGCATGTGTGCTCCTCTTAGTCAGCCTCTTGGTGTaGCGCTCAGCCAATGGAATTGCAAAGTATTTAGCTCCTGTGCAG	+
Preference number: 6 (lower is better) Translates to: RSSCACVLLLVSLLV*RSANGIAKYLAPVQ Trigger: CTGCACAGGAGCTAAATACTTTGCAATTCCATTGGCTGAGCGCAACACCAAGAGGCTGACTAAGAGGAGCACACATGCACAACTGCTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453421.1
CDS CAA 90 bp	TTCCCACGCAGCAGTTGTGCATGTGTGCTCCTCTTAGTCAGCCTCTaGGTGTTGCGCTCAGCCAATGGAATTGCAAAGTATTTAGCTCCT	+
Preference number: 6 (lower is better) Translates to: FPRSSCACVLLLVSL*VLRSANGIAKYLAP Trigger: AGGAGCTAAATACTTTGCAATTCCATTGGCTGAGCGCAACACCAAGAGGCTGACTAAGAGGAGCACACATGCACAACTGCTGCGTGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453421.1
CDS GCA 72 bp	AGTCAGCCTCTTGGTGTTGCGCTCAGCCAATGGAATTaGAAAGTATTTAGCTCCTGTGCAGGTAAACCAGCT	+
Preference number: 6 (lower is better) Translates to: SQPLGVALSQWN*KVFSSCAGKPA Trigger: AGCTGGTTTACCTGCACAGGAGCTAAATACTTTGCAATTCCATTGGCTGAGCGCAACACCAAGAGGCTGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453421.1
CDS CAA 72 bp	ACCAGCTGTGTTCTTCCACCTTTCTTGTTGTTGATCTaGTCTTGTTTATTAAGTAAGTATGACTCAGGAATG	+
Preference number: 6 (lower is better) Translates to: TSCVLPPFLLLI*SCLLSKYDSGM Trigger: CATTCCTGAGTCATACTTACTTAATAAACAAGACAAGATCAACAACAAGAAAGGTGGAAGAACACAGCTGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000453421.1

---

If you would like us to post a table for your organism of interest, or have questions, please reach out to eerik at stanford dot edu or xjgao at stanford.edu