RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CECR2 (Homo sapiens)

Ensembl gene IDs: ENSG00000099954

Ensembl transcript IDs: ENST00000262608.12, ENST00000262608.13, ENST00000342247.10, ENST00000342247.9, ENST00000355219.3, ENST00000355219.4, ENST00000400585.6, ENST00000400585.7, ENST00000497534.1, ENST00000612582.1

Found 612 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTTGCAGCAGGAGCAGAGGCTCCAGACACTGTGTGCCAAGGCTGCTaGGGACTGACCGGGGCCCCAGGAGCTACGCACAAGGCAGGAGAG +
Preference number: 1 (lower is better)
Translates to: FAAGAEAPDTVCQGC*GLTGAPGATHKAGE
Trigger: CTCTCCTGCCTTGTGCGTAGCTCCTGGGGCCCCGGTCAGTCCCCAGCAGCCTTGGCACACAGTGTCTGGAGCCTCTGCTCCTGCTGCAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp CCCCAGGAGCTACGCACAAGGCAGGAGAGTGAGGTACCTGAGCCCTaGCTAGGGAAGGGAAAGGAAGGGAAGGGAAGGGAAGGGAAGGGG +
Preference number: 1 (lower is better)
Translates to: PQELRTRQESEVPEP*LGKGKEGKGREGKG
Trigger: CCCCTTCCCTTCCCTTCCCTTCCCTTCCTTTCCCTTCCCTAGCCAGGGCTCAGGTACCTCACTCTCCTGCCTTGTGCGTAGCTCCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp TTGGAGGCTTATGAGGCGGCACCTCCTCCTGTGATGTTGCTGCTGTaGGGGTCTTTGGGAACGAGGCCTGCGACTGGACCGGGTGCATCT +
Preference number: 1 (lower is better)
Translates to: LEAYEAAPPPVMLLL*GSLGTRPATGPGAS
Trigger: AGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATAAGCCTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR TCA 90 bp ATCCAGGGGAAGTGTTGGAGGCTTATGAGGCGGCACCTCCTCCTGTaGTGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTGCGACTG +
Preference number: 1 (lower is better)
Translates to: IQGKCWRLMRRHLLL*CCCCGGLWERGLRL
Trigger: CAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATAAGCCTCCAACACTTCCCCTGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR GCA 90 bp TCCTCCTGTGATGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTaGGACTGGACCGGGTGCATCTGCATTCTTGGTCAGAGTGTCTCC +
Preference number: 1 (lower is better)
Translates to: SSCDVAAVGVFGNEA*DWTGCICILGQSVS
Trigger: GGAGACACTCTGACCAAGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR CCA 90 bp TGTGATGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTGCGACTaGACCGGGTGCATCTGCATTCTTGGTCAGAGTGTCTCCACATGG +
Preference number: 1 (lower is better)
Translates to: CDVAAVGVFGNEACD*TGCICILGQSVSTW
Trigger: CCATGTGGAGACACTCTGACCAAGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR GCA 90 bp GGGAGAGAGAGGAGACAGGATTACCTGGAAGAGTGTGCACACAACTaGTCAAGGACCACGAGGGCAGAAGGAAAGGGGGCAATGGCCCAA +
Preference number: 1 (lower is better)
Translates to: GRERRQDYLEECAHN*SRTTRAEGKGAMAQ
Trigger: TTGGGCCATTGCCCCCTTTCCTTCTGCCCTCGTGGTCCTTGAGCAGTTGTGTGCACACTCTTCCAGGTAATCCTGTCTCCTCTCTCTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 90 bp GGATGCAGTAACATTCACCCAAACACTACTGTCCCAAGGGGAAAGTaGGTGAGGCTTGGTGTCCTATGGCTGCACGGCAGAGTCCAACCC +
Preference number: 1 (lower is better)
Translates to: GCSNIHPNTTVPRGK*VRLGVLWLHGRVQP
Trigger: GGGTTGGACTCTGCCGTGCAGCCATAGGACACCAAGCCTCACGCACTTTCCCCTTGGGACAGTAGTGTTTGGGTGAATGTTACTGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 90 bp TCCCCTTTCCAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTTaGAGCAGGAGCAGAGGCTCCAGACACTGTGTGCCAAGGCTGCTG +
Preference number: 1 (lower is better)
Translates to: SPFQYWPEGSHGFCF*SRSRGSRHCVPRLL
Trigger: CAGCAGCCTTGGCACACAGTGTCTGGAGCCTCTGCTCCTGCTGCAAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp GCAGTAACATTCACCCAAACACTACTGTCCCAAGGGGAAAGTGCGTaGGGCTTGGTGTCCTATGGCTGCACGGCAGAGTCCAACCCAAAA +
Preference number: 1 (lower is better)
Translates to: AVTFTQTLLSQGESA*GLVSYGCTAESNPK
Trigger: TTTTGGGTTGGACTCTGCCGTGCAGCCATAGGACACCAAGCCTCACGCACTTTCCCCTTGGGACAGTAGTGTTTGGGTGAATGTTACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp CCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGGACTAGCTCTGATCCAGGGGAAGTG +
Preference number: 1 (lower is better)
Translates to: PSSPHSSLRVQLSIA*GSFPPWTSSDPGEV
Trigger: CACTTCCCCTGGATCAGAGCTAGTCCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR CCA 90 bp ATCGTTCACAGCATCGCTCTAGCAACAGCTGATTGGGGCGGTCACTaGGAGAGAGAGGAGACAGGATTACCTGGAAGAGTGTGCACACAA +
Preference number: 1 (lower is better)
Translates to: IVHSIALATADWGGH*EREETGLPGRVCTQ
Trigger: TTGTGTGCACACTCTTCCAGGTAATCCTGTCTCCTCTCTCTCCCAGTGACCGCCCCAATCAGCTGTTGCTAGAGCGATGCTGTGAACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp CTAAGCCTAACGAAGAGGAGCATGAGAAGGCCTTCTGAGAGCATCTaGCCCGGGCTCAGTGAGAAGATACGAACTGTTGATGAGCAGCTC +
Preference number: 1 (lower is better)
Translates to: LSLTKRSMRRPSESI*PGLSEKIRTVDEQL
Trigger: GAGCTGCTCATCAACAGTTCGTATCTTCTCACTGAGCCCGGGCCAGATGCTCTCAGAAGGCCTTCTCATGCTCCTCTTCGTTAGGCTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp CAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATaGGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCC +
Preference number: 1 (lower is better)
Translates to: QNQEGTPLSQFGPPA*ESSLSSGLKLLVVS
Trigger: GGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR TCA 90 bp TACCTTAGAGGCACCTGTGTTCCCTACTCAACTCTCAAATCTGCCTaGGCCCTAGGCAGCAGCACCAGGTTCAGCATTTGCGTACGGATA +
Preference number: 1 (lower is better)
Translates to: YLRGTCVPYSTLKSA*ALGSSTRFSICVRI
Trigger: TATCCGTACGCAAATGCTGAACCTGGTGCTGCTGCCTAGGGCTCAGGCAGATTTGAGAGTTGAGTAGGGAACACAGGTGCCTCTAAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp GGAGCCCCCGGATTGGGCAGTACATGGCTCACTAATATATGGGACTaGTTTTCTGCAATGCGGGTCCATGGAGAATCACAGAGGGTGAAC +
Preference number: 1 (lower is better)
Translates to: GAPGLGSTWLTNIWD*FSAMRVHGESQRVN
Trigger: GTTCACCCTCTGTGATTCTCCATGGACCCGCATTGCAGAAAATCAGTCCCATATATTAGTGAGCCATGTACTGCCCAATCCGGGGGCTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTaGAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCC +
Preference number: 1 (lower is better)
Translates to: DCLHQLCKRSLAEDL*NLCVSHLRSVLLGP
Trigger: GGGCCCTAAAAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CCA 90 bp GGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATaGACACATTCCCACACAGGACGCAGGAAGGCTGACAATTCTGCT +
Preference number: 1 (lower is better)
Translates to: GHSLDNGRSTSTYKA*THSHTGRRKADNSA
Trigger: AGCAGAATTGTCAGCCTTCCTGCGTCCTGTGTGGGAATGTGTCCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 90 bp CCAAGAAGTATGGATTGCAAACTTGTTTCTGACAGCTGTGGTGACTaGAACACTGGGATTTTGTGGGCCTGGGATGGCATCTGCCAGCAG +
Preference number: 1 (lower is better)
Translates to: PRSMDCKLVSDSCGD*NTGILWAWDGICQQ
Trigger: CTGCTGGCAGATGCCATCCCAGGCCCACAAAATCCCAGTGTTGCAGTCACCACAGCTGTCAGAAACAAGTTTGCAATCCATACTTCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp GAAAGGAAGGGAAGGGAAGGGAAGGGAAGGGGCTGCATGGTTTCCTaGACGGGGGTCAGCATTTCAATAACTTATGCAATATCCATACCC +
Preference number: 1 (lower is better)
Translates to: ERKGREGKGRGCMVS*TGVSISITYAISIP
Trigger: GGGTATGGATATTGCATAAGTTATTGAAATGCTGACCCCCGTTCAGGAAACCATGCAGCCCCTTCCCTTCCCTTCCCTTCCCTTCCTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp GCCTTTAGCTATTCTGAAGGCTGGCTGGCCACTAAGGAAACACAGTaGCATATTACAAGATCAAACCTTTCCTACCCTCATCTCCGGCTC +
Preference number: 1 (lower is better)
Translates to: AFSYSEGWLATKETQ*HITRSNLSYPHLRL
Trigger: GAGCCGGAGATGAGGGTAGGAAAGGTTTGATCTTGTAATATGTCACTGTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR GCA 90 bp TTAACTCCACGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTaGAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGT +
Preference number: 1 (lower is better)
Translates to: LTPRSLVLPDCLHQL*KRSLAEDLCNLCVS
Trigger: ACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 90 bp GGATTTGGAAAAGTCATCATTAACTCCACGTTCATTAGTTTTGCCTaGCTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCT +
Preference number: 1 (lower is better)
Translates to: GFGKVIINSTFISFA*LSTSAVQEIPGRGP
Trigger: AGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAATGATGACTTTTCCAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR GCA 90 bp AGGTCTAACCAGCTCCAAACTAGCTTTTTACCTCCTCCCTGCTTCTaGACAAACACAGAAACTGAAGTAGTAATGCCCCATGTTAGCGGA +
Preference number: 1 (lower is better)
Translates to: RSNQLQTSFLPPPCF*TNTETEVVMPHVSG
Trigger: TCCGCTAACATGGGGCATTACTACTTCAGTTTCTGTGTTTGTGCAGAAGCAGGGAGGAGGTAAAAAGCTAGTTTGGAGCTGGTTAGACCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp GCTGACTGGAAGGAAGGAAGGCCTTTAGCTATTCTGAAGGCTGGCTaGCCACTAAGGAAACACAGTGACATATTACAAGATCAAACCTTT +
Preference number: 1 (lower is better)
Translates to: ADWKEGRPLAILKAG*PLRKHSDILQDQTF
Trigger: AAAGGTTTGATCTTGTAATATGTCACTGTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGCCTTCCTTCCTTCCAGTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR CCA 90 bp GCACCAGGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTaGAACTGGTGTCTTGGCTTTCATTTCTCTGTATCATGGATGCTT +
Preference number: 1 (lower is better)
Translates to: APGSAFAYGYELPSS*NWCLGFHFSVSWML
Trigger: AAGCATCCATGATACAGAGAAATGAAAGCCAAGACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTGGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp CCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTaGAACACTCTAGCGATCCCAATTCCTGATACTGGTTTACAACTA +
Preference number: 1 (lower is better)
Translates to: PDREVCDEDDSSSNT*NTLAIPIPDTGLQL
Trigger: TAGTTGTAAACCAGTATCAGGAATTGGGATCGCTAGAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR TCA 90 bp AGGGAACAAGACAGAGTAAATCGACATTTAAAGCTGAGGTCTGACTaGACTGAGGGGCACAAACTGCAGGTCTTAAGGTTTTCACTAAGC +
Preference number: 1 (lower is better)
Translates to: REQDRVNRHLKLRSD*TEGHKLQVLRFSLS
Trigger: GCTTAGTGAAAACCTTAAGACCTGCAGTTTGTGCCCCTCAGTTCAGTCAGACCTCAGCTTTAAATGTCGATTTACTCTGTCTTGTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp CCATCATCCTGGAACTGGTGTCTTGGCTTTCATTTCTCTGTATCATaGATGCTTCCGATTAGCTTCCTTTTCCACGGACAGCATATGTTT +
Preference number: 1 (lower is better)
Translates to: PSSWNWCLGFHFSVS*MLPISFLFHGQHMF
Trigger: AAACATATGCTGTCCGTGGAAAAGGAAGCTAATCGGAAGCATCCATGATACAGAGAAATGAAAGCCAAGACACCAGTTCCAGGATGATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp GGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTaGTGTCTTGGCTTTCATTTCTCTGTATCATGGATGCTTCCGATT +
Preference number: 1 (lower is better)
Translates to: GSAFAYGYELPSSWN*CLGFHFSVSWMLPI
Trigger: AATCGGAAGCATCCATGATACAGAGAAATGAAAGCCAAGACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp TTTTCTCACGCAGCAAATGGCAATCACATTCTTTGTGCTATGCAGTaGTGTGAGTCCACGAATAAAAGCCTCTGCATTCTCAACCGAAAT +
Preference number: 1 (lower is better)
Translates to: FSHAANGNHILCAMQ*CESTNKSLCILNRN
Trigger: ATTTCGGTTGAGAATGCAGAGGCTTTTATTCGTGGACTCACATCACTGCATAGCACAAAGAATGTGATTGCCATTTGCTGCGTGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 90 bp GGGAAAACAAACCCAGAATCCTCCCAAGAAGCTCATCTTTTCTCTTaGGCCTTAGGGACACAAGTTTCTAACTTATTAACAACTCTACTA +
Preference number: 1 (lower is better)
Translates to: GKTNPESSQEAHLFS*ALGTQVSNLLTTLL
Trigger: TAGTAGAGTTGTTAATAAGTTAGAAACTTGTGTCCCTAAGGCCCAAGAGAAAAGATGAGCTTCTTGGGAGGATTCTGGGTTTGTTTTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 90 bp CCAGGTTATGCCAGTGATAGGTTTCTAACAAGAATTAGGATCCAGTaGGAACACAGGCTCAAAACTCAATCCACTTGCAAATACATCAAA +
Preference number: 1 (lower is better)
Translates to: PGYASDRFLTRIRIQ*EHRLKTQSTCKYIK
Trigger: TTTGATGTATTTGCAAGTGGATTGAGTTTTGAGCCTGTGTTCTCACTGGATCCTAATTCTTGTTAGAAACCTATCACTGGCATAACCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 90 bp AATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTaGTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCC +
Preference number: 1 (lower is better)
Translates to: NTKSSPFPKYIPEFS*SSKFKSTTPFLSIP
Trigger: GGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR GCA 90 bp AACCATCATTTTCCTAATGGAGAAGATGGCAAATGCATTTGCATCTaGTTTAAGACATTGCATCTGCTTAAGACACTTGGAAAGAGAAGT +
Preference number: 1 (lower is better)
Translates to: NHHFPNGEDGKCICI*FKTLHLLKTLGKRS
Trigger: ACTTCTCTTTCCAAGTGTCTTAAGCAGATGCAATGTCTTAAAGCAGATGCAAATGCATTTGCCATCTTCTCCATTAGGAAAATGATGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 90 bp AACATATCACATAACCATCATTTTCCTAATGGAGAAGATGGCAAATaGATTTGCATCTGCTTTAAGACATTGCATCTGCTTAAGACACTT +
Preference number: 1 (lower is better)
Translates to: NISHNHHFPNGEDGK*ICICFKTLHLLKTL
Trigger: AAGTGTCTTAAGCAGATGCAATGTCTTAAAGCAGATGCAAATGCATTTGCCATCTTCTCCATTAGGAAAATGATGGTTATGTGATATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 90 bp GGGGAAGTGTTGGAGGCTTATGAGGCGGCACCTCCTCCTGTGATGTaGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTGCGACTGGACCG +
Preference number: 2 (lower is better)
Translates to: GEVLEAYEAAPPPVM*LLWGSLGTRPATGP
Trigger: CGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATAAGCCTCCAACACTTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR CAA 90 bp TATGAGGCGGCACCTCCTCCTGTGATGTTGCTGCTGTGGGGGTCTTaGGGAACGAGGCCTGCGACTGGACCGGGTGCATCTGCATTCTTG +
Preference number: 2 (lower is better)
Translates to: YEAAPPPVMLLLWGS*GTRPATGPGASAFL
Trigger: CAAGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CCA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCTGCTGTGGGGGTCTTTaGGAACGAGGCCTGCGACTG +
Preference number: 2 (lower is better)
Translates to: ATSMREQPVFRAEASSSLCCGGL*ERGLRL
Trigger: CAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCA...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CCA 90 bp CCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGTGCATCTGCATTCTTaGTCAGAGTGTCTCCACATG +
Preference number: 2 (lower is better)
Translates to: PVTGSSSSMARVGRREGVVHLHS*SECLHM
Trigger: CATGTGGAGACACTCTGACCAAGAATGCAGATGCAC...CACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CCA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGACAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: SSSMARVGRREGVEQVMGQLSIA*GSFPPW
Trigger: CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTG...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR GCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACTGCGACTGGACCGGGTaGATCTGCATTCTTGGTCAG +
Preference number: 2 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHCDWTG*ICILGQ
Trigger: CTGACCAAGAATGCAGATGCACCCGGTCCAGTCGCA...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR CAA 90 bp TTCCCCTTTCCAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTaGCAGCAGGAGCAGAGGCTCCAGACACTGTGTGCCAAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: FPFPVLARRFTWFLL*QQEQRLQTLCAKAA
Trigger: AGCAGCCTTGGCACACAGTGTCTGGAGCCTCTGCTCCTGCTGCAAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR TCA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACAGTGTTGGAGGCTTATaGGGCGGCACCTCCTCCTGT +
Preference number: 2 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDSVGGL*GGTSSC
Trigger: ACAGGAGGAGGTGCCGCCTCATAAGCCTCCAACACT...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR GCA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTGGCCGAGGACCTTTaGAATCTGTGTGTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCLAEDL*NLCVSH
Trigger: ATGACTGACACACAGATTGCAAAGGTCCTCGGCCAG...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR TCA 90 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGGCACCACTCCATTCTTaGGTATACCCCCTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: GGKIRKGHHFLNLGHQHEAPLHS*VYPLPQ
Trigger: TTGGGGGAGGGGGTATACTCAAGAATGGAGTGGTGC...CTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR GCA 90 bp GTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTGTCTACATCAGCTGTaGAAGAGATCCCTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: VYISCARDPWPRTFAICVCLHQL*KRSLAE
Trigger: CTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACA...CACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CCA 90 bp AAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTCAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: KECPFRARDWLQLKYGTSQLSIA*GSFPPW
Trigger: CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTG...ACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CAA 90 bp CTTCTGAGAGCATCTGGCCCGGGCTCAGTGAGAAGATACGAACTGTaGATGAGCAGCTCGTGTGTACGGCCAGGTAAACTAAACCAACCT +
Preference number: 2 (lower is better)
Translates to: LLRASGPGSVRRYEL*MSSSCVRPGKLNQP
Trigger: AGGTTGGTTTAGTTTACCTGGCCGTACACACGAGCTGCTCATCAACAGTTCGTATCTTCTCACTGAGCCCGGGCCAGATGCTCTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR TCA 90 bp CGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGCACCACTCCATTCTTaGGTATACCCCCTCCCCCAA +
Preference number: 2 (lower is better)
Translates to: RSLVLPDCLHQLCKRSLAAPLHS*VYPLPQ
Trigger: TTGGGGGAGGGGGTATACTCAAGAATGGAGTGGTGC...GGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR TCA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCTTCTAGTAGTCTCCTaGGAGCAGTCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHLLVVS*EQSASN
Trigger: ATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAG...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR CCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCCTATCCCCATCCTCCTaGGGACCACTGAGAGCCGGC +
Preference number: 2 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGLSPSS*GPLRAG
Trigger: GCCGGCTCTCAGTGGTCCCCAGGAGGATGGGGATAG...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 90 bp TCTCAAATCTGCCTGAGCCCTAGGCAGCAGCACCAGGTTCAGCATTaGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCTTG +
Preference number: 2 (lower is better)
Translates to: SQICLSPRQQHQVQH*RTDMNFHHPGTGVL
Trigger: CAAGACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTGGTGCTGCTGCCTAGGGCTCAGGCAGATTTGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR TCA 90 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGCTTCTAGTAGTCTCCTaGGAGCAGTCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: GGKIRKGHHFLNLGHQHELLVVS*EQSASN
Trigger: ATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAG...CTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR GCA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGTGTCTACATCAGCTGTaGAAGAGATCCCTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: AKSGRDTTFSIWATSMRECLHQL*KRSLAE
Trigger: CTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACA...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR GCA 90 bp AAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATCTCCTGAGAGCAGTCTaGCTCCAATGGAGACACCAG +
Preference number: 2 (lower is better)
Translates to: KAQDTPWTMDEALVPIRHLLRAV*LQWRHQ
Trigger: CTGGTGTCTCCATTGGAGGCAGACTGCTCTCAGGAG...ATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CCA 90 bp ATACTGGTTTACAACTATTCGGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCGTGATGTTGCTGCTGTaGGGGTCTTTGGGAACGAGG +
Preference number: 2 (lower is better)
Translates to: ILVYNYSVGLVAKSGRDTVMLLL*GSLGTR
Trigger: CCTCGTTCCCAAAGACCCCCACAGCAGCAACATCAC...GGTGTCCCTTCCTGATTTTGCCACCAGCCCTACCGAATAGTTGTAAACCAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR TCA 90 bp GCAACCTTGCAGCTCCAGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTGCTTCTAGTAGTCTCCTaGGAGCAGTCTGCCTCCAAT +
Preference number: 2 (lower is better)
Translates to: ATLQLQTAYSRSALQRPVLLVVS*EQSASN
Trigger: ATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAG...CACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CCA 90 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGCTATTCTGAAGGCTaGCTGGCCACTAAGGAAACA +
Preference number: 2 (lower is better)
Translates to: GGKIRKGHHFLNLGHQHESYSEG*LATKET
Trigger: TGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCT...CTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR CCA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGCTCTCTCAGGCTGACTaGAAGGAAGGAAGGCCTTTA +
Preference number: 2 (lower is better)
Translates to: AKSGRDTTFSIWATSMRELSQAD*KEGRPL
Trigger: TAAAGGCCTTCCTTCCTTCCAGTCAGCCTGAGAGAG...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR TCA 90 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGTTCATTAGTTTTGCCTaGCTGTCTACATCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: GGKIRKGHHFLNLGHQHEFISFA*LSTSAV
Trigger: CACAGCTGATGTAGACAGTCAGGCAAAACTAATGAA...CTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR GCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTTTTGGGAACGAGGCCTaGGACTGGACCGGGTGCATC +
Preference number: 2 (lower is better)
Translates to: PLILRVVPSPNIYLSLAAFGNEA*DWTGCI
Trigger: GATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAA...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR TCA 90 bp ACTCTAGCGATCCCAATTCCTGATACTGGTTTACAACTATTCGGTAGGGCTGGTCCAGAAAGCTGTGTGTaGTGCCTTCTAGATCACAGT +
Preference number: 2 (lower is better)
Translates to: TLAIPIPDTGLQLFGRAGPESCV*CLLDHS
Trigger: ACTGTGATCTAGAAGGCATCACACACAGCTTTCTGG...ACCAGCCCTACCGAATAGTTGTAAACCAGTATCAGGAATTGGGATCGCTAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR CCA 90 bp ACTGGACCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATTGTGCAAGAGATCCCTaGCCGAGGACCTTTGCAATC +
Preference number: 2 (lower is better)
Translates to: TGPSSKTINTKSSPFPKYCARDP*PRTFAI
Trigger: GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACA...ATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CAA 90 bp TCTCAGGATTTGGAAAAGTCATCATTAACTCCACGTTCATTAGTTTaGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: SQDLEKSSLTPRSLV*PDCLHQLCKRSLAE
Trigger: CTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAATGATGACTTTTCCAAATCCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CAA 90 bp GCTGACAAGGTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTaGAGAGCAAACCTTTTCAGGATACCTTACACACTACTTCCTAAA +
Preference number: 2 (lower is better)
Translates to: ADKVTVTHRVKCPSS*RANLFRIPYTLLPK
Trigger: TTTAGGAAGTAGTGTGTAAGGTATCCTGAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCACCTTGTCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR TCA 90 bp CTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACTCCACTTCCACAAAATGTaGTTCGTGCCAGAAAGCTGT +
Preference number: 2 (lower is better)
Translates to: LTGRSVMRTIHLLIRETLHFHKM*FVPESC
Trigger: ACAGCTTTCTGGCACGAATCACATTTTGTGGAAGTG...GAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR CAA 90 bp CATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCTaGGCTTTCATTTCTCTGTATCATGGATGCTTCCGATTAGCTTCC +
Preference number: 2 (lower is better)
Translates to: HLRTDMNFHHPGTGV*AFISLYHGCFRLAS
Trigger: GGAAGCTAATCGGAAGCATCCATGATACAGAGAAATGAAAGCCAAGACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR TCA 90 bp ACTCTAGCGATCCCAATTCCTGATACTGGTTTACAACTATTCGGTAGGGCTGGTTTCATTAGTTTTGCCTaGCTGTCTACATCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: TLAIPIPDTGLQLFGRAGFISFA*LSTSAV
Trigger: CACAGCTGATGTAGACAGTCAGGCAAAACTAATGAA...ACCAGCCCTACCGAATAGTTGTAAACCAGTATCAGGAATTGGGATCGCTAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR TCA 90 bp GCAACCTTGCAGCTCCAGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTGGATAAAGGGATTTACTaGCTTTTCCTGTATCGTTCA +
Preference number: 2 (lower is better)
Translates to: ATLQLQTAYSRSALQRPVDKGIY*LFLYRS
Trigger: TGAACGATACAGGAAAAGTCAGTAAATCCCTTTATC...CACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR GCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTCTGGCCGAGGACCTTTaGAATCTGTGTGTCAGTCAT +
Preference number: 2 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPLAEDL*NLCVSH
Trigger: ATGACTGACACACAGATTGCAAAGGTCCTCGGCCAG...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTGGCTCATTTCCTCCTTaGACTAGCTCTGATCCAGGG +
Preference number: 2 (lower is better)
Translates to: PLILRVVPSPNIYLSLAAGSFPP*TSSDPG
Trigger: CCCTGGATCAGAGCTAGTCCAAGGAGGAAATGAGCC...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR TCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACAAGCGATCCCAATTCCTaGTACTGGTTTACAACTATT +
Preference number: 2 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETSDPNS*YWFTTI
Trigger: AATAGTTGTAAACCAGTATCAGGAATTGGGATCGCT...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR TCA 90 bp ATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAACATGGCAGCAATGTTaGCACAGGCTTGCTTACAGC +
Preference number: 2 (lower is better)
Translates to: ILRVVPSPNIYLSLAAHQTWQQC*HRLAYS
Trigger: GCTGTAAGCAAGCCTGTGTCAACATTGCTGCCATGT...TTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: PLILRVVPSPNIYLSLAAQLSIA*GSFPPW
Trigger: CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTG...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CCA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTTTTAGGGCCCGTGACTaGCTCCAGCTCAAGTATGGC +
Preference number: 2 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFFRARD*LQLKYG
Trigger: GCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAA...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTGTGCAAGAGATCCCTaGCCGAGGACCTTTGCAATC +
Preference number: 2 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHCARDP*PRTFAI
Trigger: GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACA...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATGTGCAAGAGATCCCTaGCCGAGGACCTTTGCAATC +
Preference number: 2 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSCARDP*PRTFAI
Trigger: GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACA...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CCA 90 bp AGGATAAAGGGATTTACTGACTTTTCCTGTATCGTTCACAGCATCGCTCTAGCAGAACTTCCATCATCCTaGAACTGGTGTCTTGGCTTT +
Preference number: 2 (lower is better)
Translates to: RIKGFTDFSCIVHSIALAELPSS*NWCLGF
Trigger: AAAGCCAAGACACCAGTTCCAGGATGATGGAAGTTC...TGCTAGAGCGATGCTGTGAACGATACAGGAAAAGTCAGTAAATCCCTTTATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR GCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTGTCTACATCAGCTGTaGAAGAGATCCCTGGCCGAG +
Preference number: 2 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFCLHQL*KRSLAE
Trigger: CTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACA...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR GCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACAATACCTGAGTTTAGCTaGTCATCAAAGTTTAAAAGC +
Preference number: 2 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETIPEFS*SSKFKS
Trigger: GCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR GCA 90 bp GACCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACATGTTGACACAGGCTTaGTTACAGCTCTCAAACTGT +
Preference number: 2 (lower is better)
Translates to: DPAPKPLILRVVPSPNIYMLTQA*LQLSNC
Trigger: ACAGTTTGAGAGCTGTAAGCAAGCCTGTGTCAACAT...GTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCCAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGG +
Preference number: 2 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFQLSIA*GSFPPW
Trigger: CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTG...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR TCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTCATTAGTTTTGCCTaGCTGTCTACATCAGCTGTG +
Preference number: 2 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFFISFA*LSTSAV
Trigger: CACAGCTGATGTAGACAGTCAGGCAAAACTAATGAA...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CCA 72 bp TATGAGGCGGCACCTCCTCCTGTGATGTTGCTGCTGTaGGGGTCTTTGGGAACGAGGCCTGCGACTGGACCG +
Preference number: 3 (lower is better)
Translates to: YEAAPPPVMLLL*GSLGTRPATGP
Trigger: CGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CAA 90 bp GGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGCAGCTTTCCATTGCTaGGGGCTCATTTCCTCCTTG +
Preference number: 3 (lower is better)
Translates to: GPVTGSSSSMARVGRREGAAFHC*GLISSL
Trigger: CAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGC...CCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CAA 90 bp GGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGTGCAGCTTTCCATaGCTTGGGGCTCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: GPVTGSSSSMARVGRREGVCSFP*LGAHFL
Trigger: GAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACAC...CCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp TGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTaGAGGGGTGGAGCAGGTGATGGGAATAGAGCTGAC +
Preference number: 3 (lower is better)
Translates to: WLQLKYGTSGSP*RGGAGDGNRAD
Trigger: GTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR GCA 72 bp GATGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTaGGACTGGACCGGGTGCATCTGCATTCTTGGTCAG +
Preference number: 3 (lower is better)
Translates to: DVAAVGVFGNEA*DWTGCICILGQ
Trigger: CTGACCAAGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR CCA 72 bp CAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTaGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCG +
Preference number: 3 (lower is better)
Translates to: QSSKECPFRARD*LQLKYGTSGSP
Trigger: CGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp AGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTaGGAGCAGTCTGCCTCCAATGGAGACACCAGGTGC +
Preference number: 3 (lower is better)
Translates to: SLSSGLKLLVVS*EQSASNGDTRC
Trigger: GCACCTGGTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR TCA 72 bp TTCACCCAAACACTACTGTCCCAAGGGGAAAGTGCGTaGGGCTTGGTGTCCTATGGCTGCACGGCAGAGTCC +
Preference number: 3 (lower is better)
Translates to: FTQTLLSQGESA*GLVSYGCTAES
Trigger: GGACTCTGCCGTGCAGCCATAGGACACCAAGCCTCACGCACTTTCCCCTTGGGACAGTAGTGTTTGGGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 72 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTaGCTCCAATGGAGACACCAGGTGCTTAGGGGACAG +
Preference number: 3 (lower is better)
Translates to: RAEASSSLLRAV*LQWRHQVLRGQ
Trigger: CTGTCCCCTAAGCACCTGGTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR CAA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCGATCCAGGGGAAGTGTaGGAGGCTTATGAGGCGGCA +
Preference number: 3 (lower is better)
Translates to: LTVYISCARDPWPRTFAIDPGEV*EAYEAA
Trigger: TGCCGCCTCATAAGCCTCCAACACTTCCCCTGGATC...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR TCA 72 bp GGCACCTGTGTTCCCTACTCAACTCTCAAATCTGCCTaGGCCCTAGGCAGCAGCACCAGGTTCAGCATTTGC +
Preference number: 3 (lower is better)
Translates to: GTCVPYSTLKSA*ALGSSTRFSIC
Trigger: GCAAATGCTGAACCTGGTGCTGCTGCCTAGGGCTCAGGCAGATTTGAGAGTTGAGTAGGGAACACAGGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 72 bp TTCCTGTATCGTTCACAGCATCGCTCTAGCAACAGCTaGTTGGGGCGGTCACTGGGAGAGAGAGGAGACAGG +
Preference number: 3 (lower is better)
Translates to: FLYRSQHRSSNS*LGRSLGERGDR
Trigger: CCTGTCTCCTCTCTCTCCCAGTGACCGCCCCAATCAGCTGTTGCTAGAGCGATGCTGTGAACGATACAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CAA 90 bp AAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGTGTGCAGCTTTCCATaGCTTGGGGCTCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: KECPFRARDWLQLKYGTSVCSFP*LGAHFL
Trigger: GAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACAC...ACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp GAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATaGGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTA +
Preference number: 3 (lower is better)
Translates to: EGTPLSQFGPPA*ESSLSSGLKLL
Trigger: TAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR GCA 72 bp GGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTaGAGCTTTCCATTGCTTGGGGCTCATTTCCTCCTT +
Preference number: 3 (lower is better)
Translates to: GHSPVLHIPVFV*SFPLLGAHFLL
Trigger: AAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR GCA 72 bp CACAGCAGCTCACGCTCCTGTGGATTCCTGCAACCTTaGAGCTCCAGACAGCTTATAGCAGATCTGCACTTC +
Preference number: 3 (lower is better)
Translates to: HSSSRSCGFLQP*SSRQLIADLHF
Trigger: GAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGCAGGAATCCACAGGAGCGTGAGCTGCTGTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 72 bp AACATTCACCCAAACACTACTGTCCCAAGGGGAAAGTaGGTGAGGCTTGGTGTCCTATGGCTGCACGGCAGA +
Preference number: 3 (lower is better)
Translates to: NIHPNTTVPRGK*VRLGVLWLHGR
Trigger: TCTGCCGTGCAGCCATAGGACACCAAGCCTCACGCACTTTCCCCTTGGGACAGTAGTGTTTGGGTGAATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 72 bp CAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTTaGAGCAGGAGCAGAGGCTCCAGACACTGTGTGCCA +
Preference number: 3 (lower is better)
Translates to: QYWPEGSHGFCF*SRSRGSRHCVP
Trigger: TGGCACACAGTGTCTGGAGCCTCTGCTCCTGCTGCAAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 72 bp GCATTCCCCTTTCCAGTACTGGCCAGAAGGTTCACATaGTTTCTGCTTTTGCAGCAGGAGCAGAGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: AFPFPVLARRFT*FLLLQQEQRLQ
Trigger: CTGGAGCCTCTGCTCCTGCTGCAAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 72 bp TGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTaGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATC +
Preference number: 3 (lower is better)
Translates to: CLTVYISCARDP*PRTFAICVSVI
Trigger: GATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CCA 72 bp CTGGACAATGGACGAAGCACTAGTACCTATAAGGCATaGACACATTCCCACACAGGACGCAGGAAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: LDNGRSTSTYKA*THSHTGRRKAD
Trigger: GTCAGCCTTCCTGCGTCCTGTGTGGGAATGTGTCCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CCA 72 bp ACGAAGAGGAGCATGAGAAGGCCTTCTGAGAGCATCTaGCCCGGGCTCAGTGAGAAGATACGAACTGTTGAT +
Preference number: 3 (lower is better)
Translates to: TKRSMRRPSESI*PGLSEKIRTVD
Trigger: ATCAACAGTTCGTATCTTCTCACTGAGCCCGGGCCAGATGCTCTCAGAAGGCCTTCTCATGCTCCTCTTCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CAA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCAATGTTGACACAGGCTaGCTTACAGCTCTCAAACTG +
Preference number: 3 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCNVDTG*LTALKL
Trigger: CAGTTTGAGAGCTGTAAGCAAGCCTGTGTCAACATT...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CAA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCCACATGGCAGCAATGTaGACACAGGCTTGCTTACAG +
Preference number: 3 (lower is better)
Translates to: LTVYISCARDPWPRTFAIHMAAM*TQACLQ
Trigger: CTGTAAGCAAGCCTGTGTCAACATTGCTGCCATGTG...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CAA 90 bp CAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTGTGTGCAGCTTTCCATaGCTTGGGGCTCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: QFSTFQSSCAAFHCLGLIVCSFP*LGAHFL
Trigger: GAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACAC...AATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CAA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACGGTGCATCTGCATTCTaGGTCAGAGTGTCTCCACAT +
Preference number: 3 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDGASAF*VRVSPH
Trigger: ATGTGGAGACACTCTGACCAAGAATGCAGATGCACC...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR TCA 72 bp GGCAGCAGCACCAGGTTCAGCATTTGCGTACGGATATaGACTTCCATCATCCTGGAACTGGTGTCTTGGCTT +
Preference number: 3 (lower is better)
Translates to: GSSTRFSICVRI*TSIILELVSWL
Trigger: AAGCCAAGACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTGGTGCTGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 72 bp CATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTaGAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTT +
Preference number: 3 (lower is better)
Translates to: HQLCKRSLAEDL*NLCVSHLRSVL
Trigger: AAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR CCA 72 bp CCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGGACTAGCTCTGATCCA +
Preference number: 3 (lower is better)
Translates to: PHSSLRVQLSIA*GSFPPWTSSDP
Trigger: TGGATCAGAGCTAGTCCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.3
3UTR-3UTR CAA 90 bp CTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACTCAGCACCACTCCATTCTaGAGTATACCCCCTCCCCCA +
Preference number: 3 (lower is better)
Translates to: LTGRSVMRTIHLLIRETLSTTPF*SIPPPP
Trigger: TGGGGGAGGGGGTATACTCAAGAATGGAGTGGTGCT...GAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR GCA 72 bp CGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTaGAAGAGATCCCTGGCCGAGGACCTTTGCAATCTG +
Preference number: 3 (lower is better)
Translates to: RSLVLPDCLHQL*KRSLAEDLCNL
Trigger: CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp AGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTaGAAGCTCAGGACACTCCCTGGACAATGGACGAAG +
Preference number: 3 (lower is better)
Translates to: RQLIADLHFKDQ*KLRTLPGQWTK
Trigger: CTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CAA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTCCTGGCCGAGGACCTTaGCAATCTGTGTGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPPGRGP*QSVCQS
Trigger: TGACTGACACACAGATTGCAAAGGTCCTCGGCCAGG...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CAA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTCCTGGCCGAGGACCTTaGCAATCTGTGTGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPPGRGP*QSVCQS
Trigger: TGACTGACACACAGATTGCAAAGGTCCTCGGCCAGG...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp GGATTGGGCAGTACATGGCTCACTAATATATGGGACTaGTTTTCTGCAATGCGGGTCCATGGAGAATCACAG +
Preference number: 3 (lower is better)
Translates to: GLGSTWLTNIWD*FSAMRVHGESQ
Trigger: CTGTGATTCTCCATGGACCCGCATTGCAGAAAATCAGTCCCATATATTAGTGAGCCATGTACTGCCCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CAA 90 bp AATAGCATTCCCCTTTCCAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTTCTAGGAATCCTGGAATaGGAGGGAAACACTCTACTG +
Preference number: 3 (lower is better)
Translates to: NSIPLSSTGQKVHMVSAFLGILE*EGNTLL
Trigger: CAGTAGAGTGTTTCCCTCCAATTCCAGGATTCCTAG...AAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGAATGCTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR GCA 72 bp CAGCTCCAAACTAGCTTTTTACCTCCTCCCTGCTTCTaGACAAACACAGAAACTGAAGTAGTAATGCCCCAT +
Preference number: 3 (lower is better)
Translates to: QLQTSFLPPPCF*TNTETEVVMPH
Trigger: ATGGGGCATTACTACTTCAGTTTCTGTGTTTGTGCAGAAGCAGGGAGGAGGTAAAAAGCTAGTTTGGAGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CAA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATCCTGGCCGAGGACCTTaGCAATCTGTGTGTCAGTCA +
Preference number: 3 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHPGRGP*QSVCQS
Trigger: TGACTGACACACAGATTGCAAAGGTCCTCGGCCAGG...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp AAAGTCATCATTAACTCCACGTTCATTAGTTTTGCCTaGCTGTCTACATCAGCTGTGCAAGAGATCCCTGGC +
Preference number: 3 (lower is better)
Translates to: KVIINSTFISFA*LSTSAVQEIPG
Trigger: GCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAATGATGACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp GAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTaGAACACTCTAGCGATCCCAATTCCTGATACTGGT +
Preference number: 3 (lower is better)
Translates to: EVCDEDDSSSNT*NTLAIPIPDTG
Trigger: ACCAGTATCAGGAATTGGGATCGCTAGAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR TCA 72 bp GACAGAGTAAATCGACATTTAAAGCTGAGGTCTGACTaGACTGAGGGGCACAAACTGCAGGTCTTAAGGTTT +
Preference number: 3 (lower is better)
Translates to: DRVNRHLKLRSD*TEGHKLQVLRF
Trigger: AAACCTTAAGACCTGCAGTTTGTGCCCCTCAGTTCAGTCAGACCTCAGCTTTAAATGTCGATTTACTCTGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 72 bp TATTCTGAAGGCTGGCTGGCCACTAAGGAAACACAGTaGCATATTACAAGATCAAACCTTTCCTACCCTCAT +
Preference number: 3 (lower is better)
Translates to: YSEGWLATKETQ*HITRSNLSYPH
Trigger: ATGAGGGTAGGAAAGGTTTGATCTTGTAATATGTCACTGTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
3UTR-3UTR CAA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCGTGTGCAGCTTTCCATaGCTTGGGGCTCATTTCCTC +
Preference number: 3 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFVCSFP*LGAHFL
Trigger: GAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACAC...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CAA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTCCACGTTCATTAGTTTaGCCTGACTGTCTACATCAG +
Preference number: 3 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPPRSLV*PDCLHQ
Trigger: CTGATGTAGACAGTCAGGCAAAACTAATGAACGTGG...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR TCA 72 bp ATTGGAGGGAAACACTCTACTGGCCCCTCCCACAGCTaGATTTATAAGAAACTAGGGCAGATTAATATTTCA +
Preference number: 3 (lower is better)
Translates to: IGGKHSTGPSHS*IYKKLGQINIS
Trigger: TGAAATATTAATCTGCCCTAGTTTCTTATAAATTCAGCTGTGGGAGGGGCCAGTAGAGTGTTTCCCTCCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR TCA 72 bp GCCAGTGATAGGTTTCTAACAAGAATTAGGATCCAGTaGGAACACAGGCTCAAAACTCAATCCACTTGCAAA +
Preference number: 3 (lower is better)
Translates to: ASDRFLTRIRIQ*EHRLKTQSTCK
Trigger: TTTGCAAGTGGATTGAGTTTTGAGCCTGTGTTCTCACTGGATCCTAATTCTTGTTAGAAACCTATCACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR-3UTR CAA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCACCACGTTCATTAGTTTaGCCTGACTGTCTACATCAG +
Preference number: 3 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSPRSLV*PDCLHQ
Trigger: CTGATGTAGACAGTCAGGCAAAACTAATGAACGTGG...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
3UTR-3UTR CAA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTCCACGTTCATTAGTTTaGCCTGACTGTCTACATCAG +
Preference number: 3 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFPRSLV*PDCLHQ
Trigger: CTGATGTAGACAGTCAGGCAAAACTAATGAACGTGG...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
CDS-3UTR GCA 90 bp GGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGCTGGGCCGGGGTAGCTaGTATCCGAGGGCCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GPVTGSSSSMARVGRREGLGRGS*YPRARD
Trigger: ATCCCTGGCCCTCGGATAGCAGCTACCCCGGCCCAG...CCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGCTGGGCGGTGTCGCTaGGTTCTGTCCCGTGCATGG +
Preference number: 4 (lower is better)
Translates to: PVTGSSSSMARVGRREGVAGRCR*VLSRAW
Trigger: CCATGCACGGGACAGAACGCAGCGACACCGCCCAGC...CACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGCAATATCCATACCCCTaGTCCCACCCCACCCACCCC +
Preference number: 4 (lower is better)
Translates to: GPVTGSSSSMARVGRREGQYPYP*SHPTHP
Trigger: GGGGTGGGTGGGGTGGGAGCAGGGGTATGGATATTG...CCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCGGCCGTTGGGCTGGGTaGCCCCTGGGTGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GAGDGNRADRALPSSPHSGRWAG*PLGGEV
Trigger: CACCTCACCACCCAGGGGCCACCCAGCCCAACGGCC...GGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGACTCTCAAATCTGCCTaGGCCCTAGGCAGCAGCACC +
Preference number: 4 (lower is better)
Translates to: PVTGSSSSMARVGRREGVTLKSA*ALGSST
Trigger: GGTGCTGCTGCCTAGGGCTCAGGCAGATTTGAGAGT...CACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGTTTAGGGCCCGTGACTaGCTCCAGCTCAAGTATGGC +
Preference number: 4 (lower is better)
Translates to: GPVTGSSSSMARVGRREGFRARD*LQLKYG
Trigger: GCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAA...CCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGGAGGTAGACCCCCTCTaGAGTACCAACACCTGGTGG +
Preference number: 4 (lower is better)
Translates to: VTGSSSSMARVGRREGVEEVDPL*STNTWW
Trigger: CCACCAGGTGTTGGTACTTCAGAGGGGGTCTACCTC...CTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGGGCAGACGAATCCCTTaGACCTGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: VTGSSSSMARVGRREGVEGRRIP*TWEVEV
Trigger: AACCTCCACCTCCCAGGTTCAAGGGATTCGTCTGCC...CTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACGTGCCCTCCCAGGGTTaGCCAGGGCAGGCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHVPSQG*PGQAWG
Trigger: CCCCCAAGCCTGCCCTGGGCAACCCTGGGAGGGCAC...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCCCCGCGGGGGCTGTGTaGAGCTGCTGCTCTGATCGT +
Preference number: 4 (lower is better)
Translates to: GAGDGNRADRALPSSPHSPAGAV*SCCSDR
Trigger: ACGATCAGAGCAGCAGCTCCACACAGCCCCCGCGGG...GGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAATAGAGCTGACATACAGCGGGGGAAACTaGCTCACAGTGCCTCCCGTC +
Preference number: 4 (lower is better)
Translates to: ARVGRREGVEQVMGIELTYSGGN*LTVPPV
Trigger: GACGGGAGGCACTGTGAGCCAGTTTCCCCCGCTGTA...TGTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp TTGGAGGCTTATGAGGCGGCACCTCCTCCTGTGATGTaGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTGCG +
Preference number: 4 (lower is better)
Translates to: LEAYEAAPPPVM*LLWGSLGTRPA
Trigger: CGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATAAGCCTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000355219.3
CDS-3UTR GCA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCACAGGGCCCACACCCTaGAGGCCTGGACTGATGTGG +
Preference number: 4 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCTGPTP*RPGLMW
Trigger: CCACATCAGTCCAGGCCTGCAGGGTGTGGGCCCTGT...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAATAGAGCTGACACAATGGCCCAACTGCTaGTTACAGCCACTCCCACCC +
Preference number: 4 (lower is better)
Translates to: ARVGRREGVEQVMGIELTQWPNC*LQPLPP
Trigger: GGGTGGGAGTGGCTGTAAGCAGCAGTTGGGCCATTG...TGTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGAGGCTGACTGGCTaGGGGTCCGCTTGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GHSPVLHIPVFVCSFPLLGRLTG*GSAWAS
Trigger: GGAAGCCCAAGCGGACCCCCAGCCAGTCAGCCTCCC...AAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGTGTGCCAAGGCTGCTaGGGACTGACCGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLVCQGC*GLTGAP
Trigger: TGGGGCCCCGGTCAGTCCCCAGCAGCCTTGGCACAC...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCGTGGAGCTGCTGCTCTaGTCGTCCCCAGAAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PQFSTFQSSCAAFHCLGLVELLL*SSPEEG
Trigger: GCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCAC...GAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGATCGAAGACATCGTCTaGATCCAGCCGGTAATCACA +
Preference number: 4 (lower is better)
Translates to: GPVTGSSSSMARVGRREGIEDIV*IQPVIT
Trigger: TGTGATTACCGGCTGGATGCAGACGATGTCTTCGAT...CCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCACTGGGCTGTCCATCATaGAGTCCCCTCCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPLGCPS*SPLPAP
Trigger: GGGTGCAGGGAGGGGACTCCATGATGGACAGCCCAG...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAATAGAGCTGACACTAGCAACAGCTGATTaGGGCGGTCACTGGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ARVGRREGVEQVMGIELTLATAD*GGHWER
Trigger: TCTCTCCCAGTGACCGCCCCAATCAGCTGTTGCTAG...TGTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAATAGAGCTGACACAGCTCACGCTCCTGTaGATTCCTGCAACCTTGCAG +
Preference number: 4 (lower is better)
Translates to: ARVGRREGVEQVMGIELTQLTLL*IPATLQ
Trigger: CTGCAAGGTTGCAGGAATCCACAGGAGCGTGAGCTG...TGTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAAGATCTTCCACTGCCTTaGCCTTCTCCTCCAACTCGC +
Preference number: 4 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQDLPLP*PSPPTR
Trigger: GCGAGTTGGAGGAGAAGGTCAAGGCAGTGGAAGATC...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCGGGAATCCATCACGTaGCCGAGAGTGCGAGGCTGG +
Preference number: 4 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHRESIT*PRVRGW
Trigger: CCAGCCTCGCACTCTCGGTCACGTGATGGATTCCCG...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGATGTGGGTGGTTAGACTaGAAGCCCCTTGGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SSSMARVGRREGVEQVMGCGWLD*KPLGGK
Trigger: TTTTCCCCCAAGGGGCTTTCAGTCTAACCACCCACA...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACCGCTCTAGCAACAGCTaGTTGGGGCGGTCACTGGGA +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHRSSNS*LGRSLG
Trigger: TCCCAGTGACCGCCCCAATCAGCTGTTGCTAGAGCG...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAATTTCCTGCAACGTTCTaGCTCTGGGGCAGAGCAGCT +
Preference number: 4 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQFPATF*LWGRAA
Trigger: AGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAA...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGGGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACGTGAGAAGAAGATCCTaGTTGGGGATGGGTGGGCTA +
Preference number: 4 (lower is better)
Translates to: GVEQVMGIELTGHSPVLHVRRRS*LGMGGL
Trigger: TAGCCCACCCATCCCCAAGCAGGATCTTCTTCTCAC...GTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAAGTCCCAAGGGGAAAGTaGGTGAGGCTTGGTGTCCTA +
Preference number: 4 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQVPRGK*VRLGVL
Trigger: TAGGACACCAAGCCTCACGCACTTTCCCCTTGGGAC...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATAAAAACCTCGGCCATTaGAAGTGCCCACCTCCCGCG +
Preference number: 4 (lower is better)
Translates to: GGAGDGNRADRALPSSPHKNLGH*KCPPPA
Trigger: CGCGGGAGGTGGGCACTTCCAATGGCCGAGGTTTTT...ATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAGTGGTGAGCTCTGCCTaGTGCAGTCAGTCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPVVSSA*CSQSAG
Trigger: CCCTGCAGACTGACTGCACCAGGCAGAGCTCACCAC...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAGGCTCATTTCCTCCTTaGACTAGCTCTGATCCAGGG +
Preference number: 4 (lower is better)
Translates to: SSSMARVGRREGVEQVMGGSFPP*TSSDPG
Trigger: CCCTGGATCAGAGCTAGTCCAAGGAGGAAATGAGCC...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCAGGAGCCCCCGGATTaGGCAGTACATGGCTCACTA +
Preference number: 4 (lower is better)
Translates to: ATSMREQPVFRAEASSSLQEPPD*AVHGSL
Trigger: TAGTGAGCCATGTACTGCCCAATCCGGGGGCTCCTG...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCGGGAGCTCCTTTCCTTaGGCCAGCAGCCATGCCCTT +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAIGSSFP*ASSHAL
Trigger: AAGGGCATGGCTGCTGGCTCAAGGAAAGGAGCTCCC...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGCTGCTGTTTCCTaGTGGACCCTTCTGGGTCCC +
Preference number: 4 (lower is better)
Translates to: RALPSSPHSSLRVQLSIAWAAVS*WTLLGP
Trigger: GGGACCCAGAAGGGTCCAGCAGGAAACAGCAGCCCA...AGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACGGGGCTGTGTGGAGCTaGTGCTCTGATCGTCCCCAG +
Preference number: 4 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDGAVWS*CSDRPQ
Trigger: CTGGGGACGATCAGAGCAGCAGCTCCACACAGCCCC...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAGTCTTGATGTCCGGCAGACTTaGAGGGCGGTCGCATGTACC +
Preference number: 4 (lower is better)
Translates to: GDGNRADRALPSSPHSSLDVRQT*RAVACT
Trigger: GGTACATGCGACCGCCCTGCAAGTCTGCCGGACATC...AAGACTGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTTCACTGTTCTCCGGTaGCCTCCCAGGGTTGCCCAG +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAIFTVLR*PPRVAQ
Trigger: CTGGGCAACCCTGGGAGGGCACCGGAGAACAGTGAA...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCGAGTGTGCACACAACTaGTCAAGGACCACGAGGGCA +
Preference number: 4 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCECAHN*SRTTRA
Trigger: TGCCCTCGTGGTCCTTGAGCAGTTGTGTGCACACTC...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCTTGGTGTCCTATGGCTaGACGGCAGAGTCCAACCCA +
Preference number: 4 (lower is better)
Translates to: GAGDGNRADRALPSSPHSLVSYG*TAESNP
Trigger: TGGGTTGGACTCTGCCGTGCAGCCATAGGACACCAA...GGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCAGCCACCAAGTACCTTaGCCTGGCCCTTGGGACCCA +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAISHQVP*PGPWDP
Trigger: TGGGTCCCAAGGGCCAGGCCAAGGTACTTGGTGGCT...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAGGACGTTTTCCCTTCTaGGCGATCATGTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: SSSMARVGRREGVEQVMGGRFPF*AIMLQI
Trigger: GATCTGCAACATGATCGCCCAGAAGGGAAAACGTCC...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCAGAGCGGGTCCAAACATaGCTCCCACCACTTCGCCCA +
Preference number: 4 (lower is better)
Translates to: PSSPHSSLRVQLSIAWGSERVQT*LPPLRP
Trigger: TGGGCGAAGTGGTGGGAGCCATGTTTGGACCCGCTC...TGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAGCAACGTTCTGCCTCTaGGGCAGAGCAGCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPATFCL*GRAAFR
Trigger: CCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGC...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGAAGAGGGACCTTGGTaGGGGAGGCTGACTGGCTGG +
Preference number: 4 (lower is better)
Translates to: TVYISCARDPWPRTFAICEEGPW*GRLTGW
Trigger: CCAGCCAGTCAGCCTCCCCCACCAAGGTCCCTCTTC...ACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGCTTGCAGACTGGCCATaGCATTCTTATCTGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PVTGSSSSMARVGRREGVLADWP*HSYLRR
Trigger: TCTTCTCAGATAAGAATGCCATGGCCAGTCTGCAAG...CACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAATAGAGCTGACAATTCTGCCCGTCATTTaGGACTTTAGCAGCCACTGC +
Preference number: 4 (lower is better)
Translates to: ARVGRREGVEQVMGIELTILPVI*DFSSHC
Trigger: GCAGTGGCTGCTAAAGTCCCAAATGACGGGCAGAAT...TGTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACGATTGGGGCGGTCACTaGGAGAGAGAGGAGACAGGA +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHDWGGH*EREETG
Trigger: TCCTGTCTCCTCTCTCTCCCAGTGACCGCCCCAATC...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACTGTCCGGAGAGTCACTaGTGGACACACCACACCCCA +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHCPESH*WTHHTP
Trigger: TGGGGTGTGGTGTGTCCACCAGTGACTCTCCGGACA...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAACTGCTAGAAGAATCTaGCGCTCTTCTTCCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SSSMARVGRREGVEQVMGTARRI*RSSSSS
Trigger: AGAGGAGGAAGAAGAGCGTCAGATTCTTCTAGCAGT...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATGGCATGAGAAGGCCTTCTaGGAGCATCTGGCCCGGGCT +
Preference number: 4 (lower is better)
Translates to: SSGHSLDNGRSTSTYKAWHEKAF*EHLARA
Trigger: AGCCCGGGCCAGATGCTCTCAGAAGGCCTTCTCATG...CCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCGCTGTGTGGAGCTGCTaGTCTGATCGTCCCCAGAAG +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAIAVWSC*SDRPQK
Trigger: CTTCTGGGGACGATCAGAGCAGCAGCTCCACACAGC...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CAGGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCACTGTGTGCCAAGGCTaGTGGGGACTGACCGGGGCC +
Preference number: 4 (lower is better)
Translates to: QVQHLRTDMNFHHPGTGVTVCQG*WGLTGA
Trigger: GGCCCCGGTCAGTCCCCAGCAGCCTTGGCACACAGT...GACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATACTGGTTTACAACTATTCGGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCAGGGCGCTCGGCGTGTaGGGGGCAACGACTTTCCTC +
Preference number: 4 (lower is better)
Translates to: ILVYNYSVGLVAKSGRDTRALGV*GATTFL
Trigger: GAGGAAAGTCGTTGCCCCCCACACGCCGAGCGCCCT...GGTGTCCCTTCCTGATTTTGCCACCAGCCCTACCGAATAGTTGTAAACCAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCGGAAGGCTGTGGCGGTaGGTGGTAGGAATACCTCAT +
Preference number: 4 (lower is better)
Translates to: VCQSSKECPFRARDWLQLGRLWR*VVGIPH
Trigger: ATGAGGTATTCCTACCACCCACCGCCACAGCCTTCC...GAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AATAGCATTCCCCTTTCCAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTTGTGGGGGAGGCTGACTaGCTGGGGGTCCGCTTGGGC +
Preference number: 4 (lower is better)
Translates to: NSIPLSSTGQKVHMVSAFVGEAD*LGVRLG
Trigger: GCCCAAGCGGACCCCCAGCCAGTCAGCCTCCCCCAC...AAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGAATGCTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCATAGAGATACTCGCTaGCTGACAACGAGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: ATSMREQPVFRAEASSSLHRDTR*LTTSSA
Trigger: GGCAGAGCTCGTTGTCAGCCAGCGAGTATCTCTATG...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTGGGAAGAGTAAGCCCTaGGCTGAAAGTGACTGGCCG +
Preference number: 4 (lower is better)
Translates to: RALPSSPHSSLRVQLSIAGKSKP*AESDWP
Trigger: CGGCCAGTCACTTTCAGCCCAGGGCTTACTCTTCCC...AGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTTGCTGTGGGGGTCTTTaGGAACGAGGCCTGCGACTG +
Preference number: 4 (lower is better)
Translates to: TVYISCARDPWPRTFAICCCGGL*ERGLRL
Trigger: CAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCA...ACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGGAACTTCCATCATCCTaGAACTGGTGTCTTGGCTTT +
Preference number: 4 (lower is better)
Translates to: VTGSSSSMARVGRREGVEELPSS*NWCLGF
Trigger: AAAGCCAAGACACCAGTTCCAGGATGATGGAAGTTC...CTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGAGGGAAGGGGCTGCATaGTTTCCTGAACGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLREGAA*FPERGS
Trigger: TGACCCCCGTTCAGGAAACCATGCAGCCCCTTCCCT...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCGAGGTACCTGAGCCCTaGCTAGGGAAGGGAAAGGAA +
Preference number: 4 (lower is better)
Translates to: PQFSTFQSSCAAFHCLGLEVPEP*LGKGKE
Trigger: TTCCTTTCCCTTCCCTAGCCAGGGCTCAGGTACCTC...GAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAATCCCCTTTCCAGTACTaGCCAGAAGGTTCACATGGT +
Preference number: 4 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQSPFQY*PEGSHG
Trigger: ACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGA...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCCGCGAAAACTCTCGGTaGCCTGTCTCCATTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PQFSTFQSSCAAFHCLGLRENSR*PVSIPL
Trigger: AAGAGGAATGGAGACAGGTCACCGAGAGTTTTCGCG...GAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACGGCCAGGAATCCTTGTaGGCCTTTACCACGTCTAGA +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHGQESL*AFTTSR
Trigger: TCTAGACGTGGTAAAGGCTCACAAGGATTCCTGGCC...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCAGAGTGCGAGGCTGGTaGGAGGGTCCTGGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGRVRGW*EGPGPR
Trigger: CCTGGGGCCAGGACCCTCTCACCAGCCTCGCACTCT...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCATGGCATTCTTATCTaGGAAGAGGGACCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: ATSMREQPVFRAEASSSLHGILI*EEGPWW
Trigger: CCACCAAGGTCCCTCTTCTCAGATAAGAATGCCATG...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGAGATACTCGCTGGCTaGCAACGAGCTCTGCCGCTT +
Preference number: 4 (lower is better)
Translates to: TVYISCARDPWPRTFAICEILAG*QRALPL
Trigger: AAGCGGCAGAGCTCGTTGTCAGCCAGCGAGTATCTC...ACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGAGTGTTGGAGGCTTATaGGGCGGCACCTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKESVGGL*GGTSSC
Trigger: ACAGGAGGAGGTGCCGCCTCATAAGCCTCCAACACT...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTTCCTCCTTGGTTTGGGCCACCAGCATaGGAGAGCAGCCTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: HSSLRVQLSIAWGSFPPWFGPPA*ESSLSS
Trigger: GGAAGACAGGCTGCTCTCTCATGCTGGTGGCCCAAA...CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCATTCTCAGGCTCTTGTaGTTCACTGTTCTCCGGTGC +
Preference number: 4 (lower is better)
Translates to: ATSMREQPVFRAEASSSLILRLL*FTVLRC
Trigger: GCACCGGAGAACAGTGAAGCACAAGAGCCTGAGAAT...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATGCCAGGCAACGGCTCTaGTTGGTCATTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: QSSKECPFRARDWLQLKYARQRL*LVILRL
Trigger: GAGCCTGAGAATGACCAAGCAGAGCCGTTGCCTGGC...ATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGCTGCGTTCTGTCCCGTaGATGGCATGGTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLLRSVP*MAWFPA
Trigger: TGCAGGAAACCATGCCATGCACGGGACAGAACGCAG...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp ACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGAAACTGGCTCACAGTaGCTCCCGTCAAACCGGGGT +
Preference number: 4 (lower is better)
Translates to: TVYISCARDPWPRTFAICETGSQ*LPSNRG
Trigger: ACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTC...ACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGCGACTGGACCGGGTaGATCTGCATTCCTGATGGT +
Preference number: 4 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLCDWTG*ICIPDG
Trigger: ACCATCAGGAATGCAGATGCACCCGGTCCAGTCGCA...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGGGGCAATGGCCCAACTaGTGCTTACAGCCACTCCCA +
Preference number: 4 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKEGQWPN*CLQPLP
Trigger: TGGGAGTGGCTGTAAGCAGCAGTTGGGCCATTGCCC...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCGACAGCTGTGGTGACTaGAACACTGGGATTTTGTGG +
Preference number: 4 (lower is better)
Translates to: GAGDGNRADRALPSSPHSDSCGD*NTGILW
Trigger: CCACAAAATCCCAGTGTTGCAGTCACCACAGCTGTC...GGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGGGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACACTGATTTTCTGCAATaGGGGTCCATGGAGAATCAC +
Preference number: 4 (lower is better)
Translates to: GVEQVMGIELTGHSPVLHTDFLQ*GSMENH
Trigger: GTGATTCTCCATGGACCCGCATTGCAGAAAATCAGT...GTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAGCAGGTCCTGGAAACTaGCTTCCCTCAGAGGGTTGG +
Preference number: 4 (lower is better)
Translates to: LCKRSLAEDLCNLCVSHLAGPGN*LPSEGW
Trigger: CCAACCCTCTGAGGGAAGCCAGTTTCCAGGACCTGC...TAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCCCATGTCTTGTCTGTaGCTCGGATGCCAAGGAATT +
Preference number: 4 (lower is better)
Translates to: ATSMREQPVFRAEASSSLPMSCL*LGCQGI
Trigger: AATTCCTTGGCATCCGAGCCACAGACAAGACATGGG...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTGGCCTGGCCCTTaGGACCCATGTCTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: EIPGRGPLQSVCQSSKECPWPGP*DPCLVC
Trigger: ACAGACAAGACATGGGTCCCAAGGGCCAGGCCAAGG...ACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAAGGAGCCATACAAGGTaGCAGGATCTGATCCTCGCA +
Preference number: 4 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPRSHTR*QDLILA
Trigger: TGCGAGGATCAGATCCTGCCACCTTGTATGGCTCCT...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CAGGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCGCTTTCAGGAAAGTCTaGTGGCCGGGCTGGAGCCCC +
Preference number: 4 (lower is better)
Translates to: QVQHLRTDMNFHHPGTGVAFRKV*WPGWSP
Trigger: GGGGCTCCAGCCCGGCCACCAGACTTTCCTGAAAGC...GACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCGGCTGGGGGTCCGCTTaGGCTTCCCTGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGGWGSA*ASLGME
Trigger: CTCCATCCCCAGGGAAGCCCAAGCGGACCCCCAGCC...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTTGGGCTGAAAGTGACTaGCCGGCCGCTGAGGGGTAT +
Preference number: 4 (lower is better)
Translates to: GPLQSVCQSSKECPFRARWAESD*PAAEGY
Trigger: ATACCCCTCAGCGGCCGGCCAGTCACTTTCAGCCCA...ACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTCCTGGCAGCGATAGATaGGACCCTCCTGAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QFSTFQSSCAAFHCLGLIPGSDR*DPPERG
Trigger: GCCTCTCTCAGGAGGGTCCCATCTATCGCTGCCAGG...AATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTCTGAGAGCATCTaGCCCGGGCTCAGTGAGAAG +
Preference number: 4 (lower is better)
Translates to: EIPGRGPLQSVCQSSKECPSESI*PGLSEK
Trigger: CTTCTCACTGAGCCCGGGCCAGATGCTCTCAGAAGG...ACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTTTTGTGGGCCTGGGATaGCATCTGCCAGCAGTAGGA +
Preference number: 4 (lower is better)
Translates to: GHSPVLHIPVFVCSFPLLFVGLG*HLPAVG
Trigger: TCCTACTGCTGGCAGATGCCATCCCAGGCCCACAAA...AAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTaGGGCCACCAGCATGAGAGAGCAGCCTGTCTTCCG +
Preference number: 4 (lower is better)
Translates to: GGKIRKGHHFLN*GHQHERAACLP
Trigger: CGGAAGACAGGCTGCTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000342247.9
ENST00000355219.3
ENST00000612582.1
CDS-3UTR TCA 90 bp ACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGGTGAGGTAGTTGTGTaGGGTAGACCCCCTCTGAAG +
Preference number: 4 (lower is better)
Translates to: TVYISCARDPWPRTFAICGEVVV*GRPPLK
Trigger: CTTCAGAGGGGGTCTACCTCACACAACTACCTCACC...ACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTTTCCCTTTCTTGTGGTaGGCTCTGCCTGGTGCAGTC +
Preference number: 4 (lower is better)
Translates to: EIPGRGPLQSVCQSSKECFPFLW*ALPGAV
Trigger: GACTGCACCAGGCAGAGCTCACCACAAGAAAGGGAA...ACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATCGGAGGAGCTGCTTTTaGGCTCCGGGCCCACTGTTT +
Preference number: 4 (lower is better)
Translates to: KAQDTPWTMDEALVPIRHRRSCF*APGPLF
Trigger: AAACAGTGGGCCCGGAGCTCAAAAGCAGCTCCTCCG...ATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCAGAGATGCTTCCCCAATaGCTCCGTTCTCGGATAGAG +
Preference number: 4 (lower is better)
Translates to: PSSPHSSLRVQLSIAWGSEMLPQ*LRSRIE
Trigger: CTCTATCCGAGAACGGAGTCATTGGGGAAGCATCTC...TGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGAGCGATCCCAATTCCTaGTACTGGTTTACAACTATT +
Preference number: 4 (lower is better)
Translates to: VTGSSSSMARVGRREGVESDPNS*YWFTTI
Trigger: AATAGTTGTAAACCAGTATCAGGAATTGGGATCGCT...CTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATCCAGAAAGCTGTGTGTaGTGCCTTCTAGATCACAGT +
Preference number: 4 (lower is better)
Translates to: GGAGDGNRADRALPSSPHPESCV*CLLDHS
Trigger: ACTGTGATCTAGAAGGCATCACACACAGCTTTCTGG...ATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AGGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTAAGCTGAGGTCTGACTaGACTGAGGGGCACAAACTG +
Preference number: 4 (lower is better)
Translates to: RALPSSPHSSLRVQLSIAKLRSD*TEGHKL
Trigger: CAGTTTGTGCCCCTCAGTTCAGTCAGACCTCAGCTT...AGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCATCACAGAGGGTGAACTaGCTGACAGACAAAGAAGGG +
Preference number: 4 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPSQRVN*LTDKEG
Trigger: CCCTTCTTTGTCTGTCAGTCAGTTCACCCTCTGTGA...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCGCAACTCTGCCTTTGTaGGCTGTGGACGTTTTCCCT +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAIATLPL*AVDVFP
Trigger: AGGGAAAACGTCCACAGCGCACAAAGGCAGAGTTGC...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACACAGGAGTCTCCTCTTaGTTGACGGGTTTGATGGAC +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHTGVSS*LTGLMD
Trigger: GTCCATCAAACCCGTCAAGCAAGAGGAGACTCCTGT...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCCGGGAGGAGAGCTGCTaGATCGCAATCATCTCTGGG +
Preference number: 4 (lower is better)
Translates to: RSLVLPDCLHQLCKRSLAREESC*IAIISG
Trigger: CCCAGAGATGATTGCGATGCAGCAGCTCTCCTCCCG...GGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTTGAGAGCAAACCTTTTCGTGAGCTCTGCCTGGTaGAGTCAGTCTGCAGGGGAG +
Preference number: 4 (lower is better)
Translates to: VTVTHRVKCPSSLRANLFVSSAW*SQSAGE
Trigger: CTCCCCTGCAGACTGACTGCACCAGGCAGAGCTCAC...GAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCATGGGACTGATTTTCTaGAATGCGGGTCCATGGAGA +
Preference number: 4 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCMGLIF*NAGPWR
Trigger: TCTCCATGGACCCGCATTGCAGAAAATCAGTCCCAT...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGCCTTTGTGCGCTGTaGACGTTTTCCCTTCTGGGC +
Preference number: 4 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKECLCAL*TFSLLG
Trigger: GCCCAGAAGGGAAAACGTCCACAGCGCACAAAGGCA...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGAGGGCCAAATGTTCCTaGTACTGCTGGCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: VYISCARDPWPRTFAICVRAKCS*YCWPHL
Trigger: CAGATGAGGCCAGCAGTACCAGGAACATTTGGCCCT...CACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGCAAGGATCCAGGGTGTaGGCCCATGTTAGAAAGGTG +
Preference number: 4 (lower is better)
Translates to: VYISCARDPWPRTFAICVQGSRV*AHVRKV
Trigger: CACCTTTCTAACATGGGCCCACACCCTGGATCCTTG...CACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATGGTTCGTAGCACCATaGTTCCCATTCCAGACGGCA +
Preference number: 4 (lower is better)
Translates to: PSSPHSSLRVQLSIAWGSWFVAP*FPFQTA
Trigger: TGCCGTCTGGAATGGGAACCATGGTGCTACGAACCA...TGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTGGGCTGGGTGGCCCCTaGGTGGTGAGGTGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IPEFSCSSKFKSTTPFLSGLGGP*VVRWEG
Trigger: GCCCTCCCACCTCACCACCCAGGGGCCACCCAGCCC...ACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGGTGATGTTGCTGCTGTaGGGGTCTTTGGGAACGAGG +
Preference number: 4 (lower is better)
Translates to: GGKIRKGHHFLNLGHQHEVMLLL*GSLGTR
Trigger: CCTCGTTCCCAAAGACCCCCACAGCAGCAACATCAC...CTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGAGGGAAACACTCTACTaGCCCCTCCCACAGCTGAAT +
Preference number: 4 (lower is better)
Translates to: LSTSAVQEIPGRGPLQSVRETLY*PLPQLN
Trigger: ATTCAGCTGTGGGAGGGGCCAGTAGAGTGTTTCCCT...CACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCGGAGACAGGATTACCTaGAAGAGTGTGCACACAACT +
Preference number: 4 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCGDRIT*KSVHTT
Trigger: AGTTGTGTGCACACTCTTCCAGGTAATCCTGTCTCC...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGAACACTGGGATTTTGTaGGCCTGGGATGGCATCTGC +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLNTGIL*AWDGIC
Trigger: GCAGATGCCATCCCAGGCCCACAAAATCCCAGTGTT...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACAGGCTTGGTGTCCTATaGCTGCACGGCAGAGTCCAA +
Preference number: 4 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDRLGVL*LHGRVQ
Trigger: TTGGACTCTGCCGTGCAGCCATAGGACACCAAGCCT...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp ACACGACAGTTCCATGCTTCACTAGGAATCCTGGAATaGGAGGGAAACACTCTACTGGCCCCTCCCACAGCT +
Preference number: 4 (lower is better)
Translates to: TRQFHASLGILE*EGNTLLAPPTA
Trigger: AGCTGTGGGAGGGGCCAGTAGAGTGTTTCCCTCCAATTCCAGGATTCCTAGTGAAGCATGGAACTGTCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp TGCCTGAGCCCTAGGCAGCAGCACCAGGTTCAGCATTaGCGTACGGATATGAACTTCCATCATCCTGGAACT +
Preference number: 4 (lower is better)
Translates to: CLSPRQQHQVQH*RTDMNFHHPGT
Trigger: AGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTGGTGCTGCTGCCTAGGGCTCAGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CAGGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCGCAGGAAGTCCTCACTaGGGAGCTTGTAGAGCTGCC +
Preference number: 4 (lower is better)
Translates to: QVQHLRTDMNFHHPGTGVAGSPH*GACRAA
Trigger: GGCAGCTCTACAAGCTCCTCAGTGAGGACTTCCTGC...GACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTTGAGAGCAAACCTTTTCCAAGGTGGCAGGATCTaGTCCTCGCAGAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VTVTHRVKCPSSLRANLFQGGRI*SSQRAK
Trigger: TTTGGCCCTCTGCGAGGATCAGATCCTGCCACCTTG...GAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTACCAAATCCCATTCCTaGACTCAGAGGCGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: TVYISCARDPWPRTFAICTKSHS*TQRRRS
Trigger: ACTCCTCCGCCTCTGAGTTCAGGAATGGGATTTGGT...ACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGGCACCACTCCATTCTTaGGTATACCCCCTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: AKSGRDTTFSIWATSMREAPLHS*VYPLPQ
Trigger: TTGGGGGAGGGGGTATACTCAAGAATGGAGTGGTGC...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGGGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTCTGGGCGATCATGTTaGAGATCTCAGGCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RALPSSPHSSLRVQLSIASGRSC*RSQAGS
Trigger: ACTTCCTGCCTGAGATCTGCAACATGATCGCCCAGA...AGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAATAGAGCTGACAAAAATGTTTCATCATTaGCCGATGGAAACACCTCTC +
Preference number: 4 (lower is better)
Translates to: ARVGRREGVEQVMGIELTKMFHH*PMETPL
Trigger: GAGAGGTGTTTCCATCGGGCAATGATGAAACATTTT...TGTCAGCTCTATTCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACATTTGGGAACGAGGCCTaGGACTGGACCGGGTGCATC +
Preference number: 4 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETFGNEA*DWTGCI
Trigger: GATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAA...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCATCAGCCAATAGCTCCTaGTACCTTTTAACTGAGGGG +
Preference number: 4 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPSANSS*YLLTEG
Trigger: CCCCTCAGTTAAAAGGTAGCAGGAGCTATTGGCTGA...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTTCCTCCTTGGGCAAGGACAATCAACTaGTCGTCAGCCGTTCTGACG +
Preference number: 4 (lower is better)
Translates to: HSSLRVQLSIAWGSFPPWARTIN*SSAVLT
Trigger: CGTCAGAACGGCTGACGAGCAGTTGATTGTCCTTGC...CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGGAAGGAAGGCCTTTAGCTATTCTGAAGGCTGGCTGGCCACTAAGGAAACACCTTCCCTCAGAGGGTTaGGCTTCCCTTCTTCGAGCT +
Preference number: 4 (lower is better)
Translates to: KEGRPLAILKAGWPLRKHLPSEG*ASLLRA
Trigger: AGCTCGAAGAAGGGAAGCCCAACCCTCTGAGGGAAG...GTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGCCTTCCTTCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGATTGTCTTCACCCAATaGCTCCACACGGAGACTGTC +
Preference number: 4 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLIVFTQ*LHTETV
Trigger: GACAGTCTCCGTGTGGAGCCATTGGGTGAAGACAAT...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGCATTCCTCTTCTGTCTaGCACAGGAGCCACCAAGTA +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLHSSSV*HRSHQV
Trigger: TACTTGGTGGCTCCTGTGCCAGACAGAAGAGGAATG...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGGAAGGAAGGCCTTTAGCTATTCTGAAGGCTGGCTGGCCACTAAGGAAACACAAAAGGGTGCCTGGCTaGGTGTCCCACCACAATGCA +
Preference number: 4 (lower is better)
Translates to: KEGRPLAILKAGWPLRKHKRVPG*VSHHNA
Trigger: TGCATTGTGGTGGGACACCCAGCCAGGCACCCTTTT...GTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGCCTTCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGTTTAAAAAGGGTGCCTaGCTGGGTGTCCCACCACAA +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLFKKGA*LGVPPQ
Trigger: TTGTGGTGGGACACCCAGCCAGGCACCCTTTTTAAA...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGACTGCTGGCCTCATCTaGTTTAAAAAGGGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: LSTSAVQEIPGRGPLQSVTAGLI*FKKGAW
Trigger: CCAGGCACCCTTTTTAAACCAGATGAGGCCAGCAGT...CACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATGGGGCAACGGCTCTGCTTaGTCATTCTCAGGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: SSGHSLDNGRSTSTYKAWGNGSA*SFSGSC
Trigger: ACAAGAGCCTGAGAATGACCAAGCAGAGCCGTTGCC...CCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTGCACCCTTGGGCGGCTaGGCCGGGGTAGCTGCTATC +
Preference number: 4 (lower is better)
Translates to: LRVVPSPNIYLSLAAHQSAPLGG*AGVAAI
Trigger: GATAGCAGCTACCCCGGCCCAGCCGCCCAAGGGTGC...ACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATGGATACCTCATTCCTTGTaGGGGGCGATACCGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SSGHSLDNGRSTSTYKAWIPHSL*GAIPGK
Trigger: TTTCCCCGGTATCGCCCCCCACAAGGAATGAGGTAT...CCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAAGGTCTGTACATTTCCTaGAAAGGTCCTCTTATTCCA +
Preference number: 4 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQGLYIS*KGPLIP
Trigger: TGGAATAAGAGGACCTTTCCAGGAAATGTACAGACC...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGCAGCTTTCCATTGCTTaGGGCTCATTTCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLQLSIA*GSFPPW
Trigger: CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTG...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAGGAGAGGCGGAGAGGTaGGATGGAAAGTTACGTCAA +
Preference number: 4 (lower is better)
Translates to: LCKRSLAEDLCNLCVSHLGEAER*DGKLRQ
Trigger: TTGACGTAACTTTCCATCCCACCTCTCCGCCTCTCC...TAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACCGGAGAGTCACTGGTaGACACACCACACCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETPESHW*THHTPG
Trigger: TCCTGGGGTGTGGTGTGTCCACCAGTGACTCTCCGG...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGATCAACATCCAGCCTaGAGGCAAAACTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLDQHPA*RQNLCP
Trigger: GGGACACAAGTTTTGCCTCCAGGCTGGATGTTGATC...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAATCCTGGCTGGAACTaGGCTGGAGCATACATGCTT +
Preference number: 4 (lower is better)
Translates to: LCKRSLAEDLCNLCVSHLNPGWN*AGAYML
Trigger: AAGCATGTATGCTCCAGCTCAGTTCCAGCCAGGATT...TAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACCACTTCCACAAAATGTaGTTCGTGCCAGAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHHFHKM*FVPESC
Trigger: ACAGCTTTCTGGCACGAATCACATTTTGTGGAAGTG...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCGAAGTGAGAGGCCTCTaGTTCAAACCAGCATTACCA +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAIEVRGL*FKPALP
Trigger: TGGTAATGCTGGTTTGAATCAGAGGCCTCTCACTTC...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GGGGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACGATAAAGGGATTTACTaGCTTTTCCTGTATCGTTCA +
Preference number: 4 (lower is better)
Translates to: GVEQVMGIELTGHSPVLHDKGIY*LFLYRS
Trigger: TGAACGATACAGGAAAAGTCAGTAAATCCCTTTATC...GTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCCATTGGATTTTCCTTaGACCGGGTCCTCTTTGTAC +
Preference number: 4 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHPLDFP*TGSSLY
Trigger: GTACAAAGAGGACCCGGTGCAAGGAAAATCCAATGG...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCTCGGCCATTGGAAGTaGCCACCTCCCGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: SPNIYLSLAAHQSLKAPLLGHWK*PPPAGA
Trigger: AGCCCCCGCGGGAGGTGGGCACTTCCAATGGCCGAG...GAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GCAACCTTGCAGCTCCAGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTGCTTGGGCCACTTATCTaGCCAAGCTGCAAGGATCCA +
Preference number: 4 (lower is better)
Translates to: ATLQLQTAYSRSALQRPVLGPLI*PSCKDP
Trigger: TGGATCCTTGCAGCTTGGGCAGATAAGTGGCCCAAG...CACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGAAACAAAGAACTGGGTaGTGGCACTGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: AKSGRDTTFSIWATSMREKQRTG*WHWRWL
Trigger: CAGCCACCTCCAGTGCCAGCACCCAGTTCTTTGTTT...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTTGTCTACATCAGCTGTaGAAGAGATCCCTGGCCGAG +
Preference number: 4 (lower is better)
Translates to: GPLQSVCQSSKECPFRARCLHQL*KRSLAE
Trigger: CTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACA...ACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGATCTGCTTTAAGACATTaGATCTGCTTAAGACACTTG +
Preference number: 4 (lower is better)
Translates to: SSSMARVGRREGVEQVMGSALRH*ICLRHL
Trigger: CAAGTGTCTTAAGCAGATGCAATGTCTTAAAGCAGA...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGGATAATGACACCAAATaGTTAGTCACAAGAAACACT +
Preference number: 4 (lower is better)
Translates to: VTGSSSSMARVGRREGVEDNDTK*LVTRNT
Trigger: AGTGTTTCTTGTGACTAAGCATTTGGTGTCATTATC...CTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGGGTTCACATGGTTTCTaGTTTTGCAGCAGGAGCAGA +
Preference number: 4 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLGSHGF*FCSRSR
Trigger: TCTGCTCCTGCTGCAAAAGCAGAAACCATGTGAACC...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGCTGTTAATTCCAACTaGAGGCTGCATGGTGAAAGG +
Preference number: 4 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLAVNSN*RLHGER
Trigger: CCTTTCACCATGCAGCCTCCAGTTGGAATTAACAGC...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTGTGGTAAGGCACACCTaGGGGGCAGACGCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPVVRHT*GADAGG
Trigger: TCCTCCCGCGTCTGCCCCCCAGGTGTGCCTTACCAC...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGACCAGTGAAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCAGTACCAACACCTGGTaGTTTCTCTTCAAGGCCAGG +
Preference number: 4 (lower is better)
Translates to: KTSESSGHSLDNGRSTSTSTNTW*FLFKAR
Trigger: CCTGGCCTTGAAGAGAAACCACCAGGTGTTGGTACT...GGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGGAAGGAAGGCCTTTAGCTATTCTGAAGGCTGGCTGGCCACTAAGGAAACACGTTCTGTCCCGTGCATaGCATGGTTTCCTGCAACGT +
Preference number: 4 (lower is better)
Translates to: KEGRPLAILKAGWPLRKHVLSRA*HGFLQR
Trigger: ACGTTGCAGGAAACCATGCCATGCACGGGACAGAAC...GTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGCCTTCCTTCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTAACTCCACGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGAAACCGGGGTCTGTGCTaGGCGGTGTCGCTGCGTTCT +
Preference number: 4 (lower is better)
Translates to: LTPRSLVLPDCLHQLCKRNRGLC*AVSLRS
Trigger: AGAACGCAGCGACACCGCCCAGCACAGACCCCGGTT...TCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTTGAGAGCAAACCTTTTCGTGGTAGGAAGGCTGTaGCGGTGGGTGGTAGGAATA +
Preference number: 4 (lower is better)
Translates to: VTVTHRVKCPSSLRANLFVVGRL*RWVVGI
Trigger: TATTCCTACCACCCACCGCCACAGCCTTCCTACCAC...GAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGACCAGTGAAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCCTCTCTCAGGCTGACTaGAAGGAAGGAAGGCCTTTA +
Preference number: 4 (lower is better)
Translates to: KTSESSGHSLDNGRSTSTLSQAD*KEGRPL
Trigger: TAAAGGCCTTCCTTCCTTCCAGTCAGCCTGAGAGAG...GGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAACATTTCTCTGTATCATaGATGCTTCCGATTAGCTTC +
Preference number: 4 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQHFSVS*MLPISF
Trigger: GAAGCTAATCGGAAGCATCCATGATACAGAGAAATG...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTCCATCATCCTGGAACTaGTGTCTTGGCTTTCATTTC +
Preference number: 4 (lower is better)
Translates to: KECPFRARDWLQLKYGTSPSSWN*CLGFHF
Trigger: GAAATGAAAGCCAAGACACCAGTTCCAGGATGATGG...ACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGACCAGTGAAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCGGCGGAGAGGTGGGATaGAAAGTTACGTCAACAAGA +
Preference number: 4 (lower is better)
Translates to: KTSESSGHSLDNGRSTSTGGEVG*KVTSTR
Trigger: TCTTGTTGACGTAACTTTCCATCCCACCTCTCCGCC...GGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp ACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTaGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCT +
Preference number: 4 (lower is better)
Translates to: TSAVQEIPGRGP*QSVCQSSKECP
Trigger: AGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
CDS-3UTR TCA 90 bp AAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTAGAATTAGGATCCAGTaGGAACACAGGCTCAAAACT +
Preference number: 4 (lower is better)
Translates to: KECPFRARDWLQLKYGTSRIRIQ*EHRLKT
Trigger: AGTTTTGAGCCTGTGTTCTCACTGGATCCTAATTCT...ACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp ACTCTAGCGATCCCAATTCCTGATACTGGTTTACAACTATTCGGTAGGGCTGGTCTTATCTGCCCAAGCTaGAAGGATCCAGGGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TLAIPIPDTGLQLFGRAGLICPS*KDPGCG
Trigger: CCCACACCCTGGATCCTTGCAGCTTGGGCAGATAAG...ACCAGCCCTACCGAATAGTTGTAAACCAGTATCAGGAATTGGGATCGCTAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CAGGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCGAGCTGGAGCATACATaGTTCCATCCTGACTTGGGC +
Preference number: 4 (lower is better)
Translates to: QVQHLRTDMNFHHPGTGVELEHT*FHPDLG
Trigger: GCCCAAGTCAGGATGGAAGCATGTATGCTCCAGCTC...GACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGAGGGCCAGGGATTCTTaGCCTTCATTGCTTTACAGT +
Preference number: 4 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKERARDS*PSLLYS
Trigger: ACTGTAAAGCAATGAAGGGCAAGAATCCCTGGCCCT...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTATCTGGACCAGGATTCTaGCCGTCATTTGGGACTTTA +
Preference number: 4 (lower is better)
Translates to: LCKRSLAEDLCNLCVSHLSGPGF*PSFGTL
Trigger: TAAAGTCCCAAATGACGGGCAGAATCCTGGTCCAGA...TAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGCTGGCCGAGGACCTTTaGAATCTGTGTGTCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AKSGRDTTFSIWATSMRELAEDL*NLCVSH
Trigger: ATGACTGACACACAGATTGCAAAGGTCCTCGGCCAG...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCTCTCTGTATCATGGATaGTTCCGATTAGCTTCCTTT +
Preference number: 4 (lower is better)
Translates to: EQPVFRAEASSSLLRAVCSLYHG*FRLASF
Trigger: AAAGGAAGCTAATCGGAAGCATCCATGATACAGAGA...GCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTTCCTCCTTGGCCTCCTCCCTGCTTCTaGACAAACACAGAAACTGAA +
Preference number: 4 (lower is better)
Translates to: HSSLRVQLSIAWGSFPPWPPPCF*TNTETE
Trigger: TTCAGTTTCTGTGTTTGTGCAGAAGCAGGGAGGAGG...CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATCCAAGAAGTATGGATTaGAAACTTGTTTCTGACAGC +
Preference number: 4 (lower is better)
Translates to: GGAGDGNRADRALPSSPHPRSMD*KLVSDS
Trigger: GCTGTCAGAAACAAGTTTGCAATCCATACTTCTTGG...ATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCAAGGCTCCCCGGGGTGTaGCTCCGGGACTCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSRLPGV*LRDSRG
Trigger: TCCTCTGGAGTCCCGGAGCCACACCCCGGGGAGCCT...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAGTCTTGTCAGAAAAGCTCTGTaGACAGGCATAGTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: GDGNRADRALPSSPHSSLVRKAL*TGIVRS
Trigger: ACTCCTTACTATGCCTGTCCACAGAGCTTTTCTGAC...AAGACTGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACAGCTTCTCTTCCTCTaGACCAGGATTCTGCCCGTC +
Preference number: 4 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETQLLFL*TRILPV
Trigger: GACGGGCAGAATCCTGGTCCAGAGGAAGAGAAGCTG...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTTCTTTGGGACTCTCTaGCCTCTCCATAGATTCATC +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAIFFGTL*PLHRFI
Trigger: GATGAATCTATGGAGAGGCCAGAGAGTCCCAAAGAA...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGAGCTATTCTGAAGGCTaGCTGGCCACTAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKESYSEG*LATKET
Trigger: TGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCT...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTCTATCCCCATCCTCCTaGGGACCACTGAGAGCCGGC +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPLSPSS*GPLRAG
Trigger: GCCGGCTCTCAGTGGTCCCCAGGAGGATGGGGATAG...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACATCCACGTCATCTCTGTaGAGAGCGGCTTCTAACTCC +
Preference number: 4 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETSTSSL*RAASNS
Trigger: GGAGTTAGAAGCCGCTCTTCACAGAGATGACGTGGA...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ACTCTAGCGATCCCAATTCCTGATACTGGTTTACAACTATTCGGTAGGGCTGGTCCACAATGCAGGGGATaGGAAAAACCTCGGCCATTG +
Preference number: 4 (lower is better)
Translates to: TLAIPIPDTGLQLFGRAGPQCRG*EKPRPL
Trigger: CAATGGCCGAGGTTTTTCTCATCCCCTGCATTGTGG...ACCAGCCCTACCGAATAGTTGTAAACCAGTATCAGGAATTGGGATCGCTAGAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTCCTGCAGGCCTGGACTaGTGTGGTAATGGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPPAGLD*CGNGQL
Trigger: CAGCTGCCCATTACCACATCAGTCCAGGCCTGCAGG...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCCTTGGTGGGGGAGGCTaGCTGGCTGGGGGTCCGCTT +
Preference number: 4 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFLGGGG*LAGGPL
Trigger: AAGCGGACCCCCAGCCAGTCAGCCTCCCCCACCAAG...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACATTTGCGTACGGATATaGACTTCCATCATCCTGGAA +
Preference number: 4 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHICVRI*TSIILE
Trigger: TTCCAGGATGATGGAAGTTCATATCCGTACGCAAAT...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCCCTAGGATGCAACTCTaGCTTTGTGCGCTGTGGACG +
Preference number: 4 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGPRMQL*LCALWT
Trigger: CGTCCACAGCGCACAAAGGCAGAGTTGCATCCTAGG...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCGCTTTTCGGAACCACTaGTACCAAGGCCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGAFRNH*YQGPSP
Trigger: AGGGGAAGGGCCTTGGTAGCAGTGGTTCCGAAAAGC...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATGGAACACGACAGTTCCATaGTTCACTAGGAATCCTGGA +
Preference number: 4 (lower is better)
Translates to: SSGHSLDNGRSTSTYKAWNTTVP*FTRNPG
Trigger: TCCAGGATTCCTAGTGAAGCATGGAACTGTCGTGTT...CCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTGGATTCCTGCAACCTTaGAGCTCCAGACAGCTTATA +
Preference number: 4 (lower is better)
Translates to: QFSTFQSSCAAFHCLGLIGFLQP*SSRQLI
Trigger: TATAAGCTGTCTGGAGCTGCAAGGTTGCAGGAATCC...AATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TTAACTCCACGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGACCGAGATCGTGCCATTaGACTCCAGTCTGGGGGACA +
Preference number: 4 (lower is better)
Translates to: LTPRSLVLPDCLHQLCKRPRSCH*TPVWGT
Trigger: TGTCCCCCAGACTGGAGTGCAATGGCACGATCTCGG...TCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTGCTGCTGTTTCCTGCTaGACCCTTCTGGGTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LRVVPSPNIYLSLAAHQSAAVSC*TLLGPW
Trigger: CCAGGGACCCAGAAGGGTCCAGCAGGAAACAGCAGC...ACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ACTCTAGCGATCCCAATTCCTGATACTGGTTTACAACTATTCGGTAGGGCTGGTTTCCTCCATTCTCCATaGGCTGCTGTTTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: TLAIPIPDTGLQLFGRAGFLHSP*AAVSCW
Trigger: CCAGCAGGAAACAGCAGCCCATGGAGAATGGAGGAA...ACCAGCCCTACCGAATAGTTGTAAACCAGTATCAGGAATTGGGATCGCTAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCACTGGTGAGAGGGTCCTaGCCCCAGGTGGGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSLVRGS*PQVGLL
Trigger: GAGAAGCCCCACCTGGGGCCAGGACCCTCTCACCAG...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCTTGGTAGCTGCGTTATaGTTGTCCAGGTCTAAAAAT +
Preference number: 4 (lower is better)
Translates to: VCQSSKECPFRARDWLQLLVAAL*LSRSKN
Trigger: ATTTTTAGACCTGGACAACCATAACGCAGCTACCAA...GAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCCCTGAGAGAGGCCGTTaGGCTGGGTGGCCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFPERGR*AGWPLG
Trigger: ACCCAGGGGCCACCCAGCCCAACGGCCTCTCTCAGG...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTCTGCTTGGGGATGGGTaGGCTAGGGGTTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPLLGDG*ARGSQQ
Trigger: CTGCTGTGAACCCCTAGCCCACCCATCCCCAAGCAG...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACTTCATTAGTTTTGCCTaGCTGTCTACATCAGCTGTG +
Preference number: 4 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDFISFA*LSTSAV
Trigger: CACAGCTGATGTAGACAGTCAGGCAAAACTAATGAA...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACAGCCTTTCCTTTCTATaGAAACCAAGGTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDSLSFL*KPRFSA
Trigger: TGCAGAGAACCTTGGTTTTCATAGAAAGGAAAGGCT...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAACTAATATATGGGACTaGTTTTCTGCAATGCGGGTC +
Preference number: 4 (lower is better)
Translates to: LCKRSLAEDLCNLCVSHLTNIWD*FSAMRV
Trigger: GACCCGCATTGCAGAAAATCAGTCCCATATATTAGT...TAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGCTTTGTGCTATGCAGTaGTGTGAGTCCACGAATAAA +
Preference number: 4 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKELCAMQ*CESTNK
Trigger: TTTATTCGTGGACTCACATCACTGCATAGCACAAAG...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp TTAACTCCACGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGAGGCTGCATGGTTTCCTaGACGGGGGTCAGCATTTCA +
Preference number: 4 (lower is better)
Translates to: LTPRSLVLPDCLHQLCKRGCMVS*TGVSIS
Trigger: TGAAATGCTGACCCCCGTTCAGGAAACCATGCAGCC...TCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AAGGAAGGAAGGCCTTTAGCTATTCTGAAGGCTGGCTGGCCACTAAGGAAACACTCAGTTTCTTCTCCATaGTGGAAATATCCATGGGGG +
Preference number: 4 (lower is better)
Translates to: KEGRPLAILKAGWPLRKHSVSSP*WKYPWG
Trigger: CCCCCATGGATATTTCCAGCATGGAGAAGAAACTGA...GTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGCCTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCTCACGTGACCGAGAGTaGGAGGCTGGTGAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SPNIYLSLAAHQSLKAPLSRDRE*EAGERV
Trigger: GACCCTCTCACCAGCCTCGCACTCTCGGTCACGTGA...GAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp ACTGGACCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATCATGGCATGGTTTCCTaGAACGTTCTGCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: TGPSSKTINTKSSPFPKYHGMVS*NVLPLG
Trigger: CCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATG...ATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGGTCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACACATTCTTTGTGCTATaGAGTGATGTGAGTCCACGA +
Preference number: 4 (lower is better)
Translates to: LVLPDCLHQLCKRSLAEDTFFVL*SDVSPR
Trigger: TCGTGGACTCACATCACTGCATAGCACAAAGAATGT...GTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AATAGCATTCCCCTTTCCAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTTCATGGTTTCTGCTTTTaGAGCAGGAGCAGAGGCTCC +
Preference number: 4 (lower is better)
Translates to: NSIPLSSTGQKVHMVSAFHGFCF*SRSRGS
Trigger: GGAGCCTCTGCTCCTGCTGCAAAAGCAGAAACCATG...AAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGAATGCTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACTCGGTTTGATGGACAGGTaGTCAGACATCCACCTAGGA +
Preference number: 4 (lower is better)
Translates to: LTGRSVMRTIHLLIRETLGLMDR*SDIHLG
Trigger: TCCTAGGTGGATGTCTGACCACCTGTCCATCAAACC...GAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAATTATCAGACATCTTaGTATACTCACTACTTTCCC +
Preference number: 4 (lower is better)
Translates to: GAGDGNRADRALPSSPHSNYQTS*YTHYFP
Trigger: GGGAAAGTAGTGAGTATACCAAGATGTCTGATAATT...GGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTACCCTTCTGGGTCCCTaGAGCGGGTCCAAACATGGC +
Preference number: 4 (lower is better)
Translates to: IPEFSCSSKFKSTTPFLSTLLGP*SGSKHG
Trigger: GCCATGTTTGGACCCGCTCCAGGGACCCAGAAGGGT...ACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGATCGATACATATGGCTaGGAGGAATTTCTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: VYISCARDPWPRTFAICVIDTYG*EEFLSF
Trigger: AAAGCTCAGAAATTCCTCCCAGCCATATGTATCGAT...CACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATCCCTGTCTGCCACCGTaGAGAGGTCTCTCACGCACC +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHPCLPP*RGLSRT
Trigger: GGTGCGTGAGAGACCTCTCCACGGTGGCAGACAGGG...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AGGATAAAGGGATTTACTGACTTTTCCTGTATCGTTCACAGCATCGCTCTAGCAGTCCCGTGCATGGCATaGTTTCCTGCAACGTTCTGC +
Preference number: 4 (lower is better)
Translates to: RIKGFTDFSCIVHSIALAVPCMA*FPATFC
Trigger: GCAGAACGTTGCAGGAAACCATGCCATGCACGGGAC...TGCTAGAGCGATGCTGTGAACGATACAGGAAAAGTCAGTAAATCCCTTTATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GACCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCACACCCTGCAGGCCTaGACTGATGTGGTAATGGGC +
Preference number: 4 (lower is better)
Translates to: DPAPKPLILRVVPSPNIYHTLQA*TDVVMG
Trigger: GCCCATTACCACATCAGTCCAGGCCTGCAGGGTGTG...GTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp AAGGAAGGAAGGCCTTTAGCTATTCTGAAGGCTGGCTGGCCACTAAGGAAACACGGTCTAAAAATTCTTTaGGACTCTCTGGCCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KEGRPLAILKAGWPLRKHGLKIL*DSLASP
Trigger: TGGAGAGGCCAGAGAGTCCCAAAGAATTTTTAGACC...GTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAATAGCTAAAGGCCTTCCTTCCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCTATACAGCAGATAAATaGCATGGGATAATGACACCA +
Preference number: 4 (lower is better)
Translates to: VCQSSKECPFRARDWLQLYTADK*HGIMTP
Trigger: TGGTGTCATTATCCCATGCCATTTATCTGCTGTATA...GAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTGGGATTTTGTGGGCCTaGGATGGCATCTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRVVPSPNIYLSLAAHQSGILWA*DGICQQ
Trigger: CTGCTGGCAGATGCCATCCCAGGCCCACAAAATCCC...ACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GCAACCTTGCAGCTCCAGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTGTCTCTGCAAGCAGGTTaGGGTTCTTACACTACTCAA +
Preference number: 4 (lower is better)
Translates to: ATLQLQTAYSRSALQRPVSLQAG*GSYTTQ
Trigger: TTGAGTAGTGTAAGAACCCCAACCTGCTTGCAGAGA...CACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTGTGACTGACATTGGGTaGGCTACCTGCGGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPVTDIG*ATCGKG
Trigger: CCCTTTTCCGCAGGTAGCTCACCCAATGTCAGTCAC...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp AATAGCATTCCCCTTTCCAGTACTGGCCAGAAGGTTCACATGGTTTCTGCTTTTGGCCCCTCCCACAGCTaGATTTATAAGAAACTAGGG +
Preference number: 4 (lower is better)
Translates to: NSIPLSSTGQKVHMVSAFGPSHS*IYKKLG
Trigger: CCCTAGTTTCTTATAAATTCAGCTGTGGGAGGGGCC...AAAAGCAGAAACCATGTGAACCTTCTGGCCAGTACTGGAAAGGGGAATGCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCAAGTGTCGCTCTCAGTaGAACAGGGAATCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGKCRSQ*NRESAD
Trigger: GTCTGCTGATTCCCTGTTTCACTGAGAGCGACACTT...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AGGATAAAGGGATTTACTGACTTTTCCTGTATCGTTCACAGCATCGCTCTAGCATTGAGCCAGCAGCCATaGCCTTTCTTCCCTGAGCTT +
Preference number: 4 (lower is better)
Translates to: RIKGFTDFSCIVHSIALALSQQP*PFFPEL
Trigger: AAGCTCAGGGAAGAAAGGGCATGGCTGCTGGCTCAA...TGCTAGAGCGATGCTGTGAACGATACAGGAAAAGTCAGTAAATCCCTTTATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTCAAACCGGGGTCTGTaGTGGGCGGTGTCGCTGCGT +
Preference number: 4 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFSNRGL*WAVSLR
Trigger: ACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGA...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCGGATGGAGAGGTCTCTaGCAGTCAGAAAAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGGWRGL*QSEKLC
Trigger: ACAGAGCTTTTCTGACTGGCAGAGACCTCTCCATCC...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTGCTGACAACGAGCTCTaGCGCTTGGTAGCTGCGTTA +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPADNEL*RLVAAL
Trigger: TAACGCAGCTACCAAGCGGCAGAGCTCGTTGTCAGC...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACTTAAGACATTGCATCTaGTTAAGACACTTGGAAAGA +
Preference number: 4 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHLRHCI*LRHLER
Trigger: TCTTTCCAAGTGTCTTAAGCAGATGCAATGTCTTAA...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCACGAATAAAAGCCTCTaGATTCTCAACCGAAATAAG +
Preference number: 4 (lower is better)
Translates to: LTVYISCARDPWPRTFAITNKSL*ILNRNK
Trigger: CTTATTTCGGTTGAGAATGCAGAGGCTTTTATTCGT...GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GACCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCGAAGAGGCAGGTCCTaGAAACTGGCTTCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: DPAPKPLILRVVPSPNIYRRGRS*KLASLR
Trigger: TCTGAGGGAAGCCAGTTTCCAGGACCTGCCTCTTCG...GTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATCTGGGGATGGGATGCTaGGGACTTCCCTCCCATCAC +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHLGMGC*GLPSHH
Trigger: GTGATGGGAGGGAAGTCCCCAGCATCCCATCCCCAG...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTATGCCCTTTCTTCCCTaGGCTTTCTCCTCTTCGCTC +
Preference number: 4 (lower is better)
Translates to: LRVVPSPNIYLSLAAHQSMPFLP*AFSSSL
Trigger: GAGCGAAGAGGAGAAAGCTCAGGGAAGAAAGGGCAT...ACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCACGGTCGCATGTACCCTaGGGAAGGAACTCCATGAGG +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSRSHVP*GRNSMR
Trigger: CCTCATGGAGTTCCTTCCTCAGGGTACATGCGACCG...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAATGGGGGCTGACACAGTaGCTGACATTGGGTGAGCTA +
Preference number: 4 (lower is better)
Translates to: ILRVVPSPNIYLSLAAHQWGLTQ*LTLGEL
Trigger: TAGCTCACCCAATGTCAGTCACTGTGTCAGCCCCCA...TTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp ATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTCTGCCGCTTGGTAGCTaGGTTATGGTTGTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: IPEFSCSSKFKSTTPFLSLPLGS*VMVVQV
Trigger: GACCTGGACAACCATAACGCAGCTACCAAGCGGCAG...ACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTCTCAACTCTCAAATCTaGCTGAGCCCTAGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPLNSQI*LSPRQQ
Trigger: CTGCTGCCTAGGGCTCAGGCAGATTTGAGAGTTGAG...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGAAATGCATTTGCATCTaGTTTAAGACATTGCATCTG +
Preference number: 4 (lower is better)
Translates to: VYISCARDPWPRTFAICVKCICI*FKTLHL
Trigger: CAGATGCAATGTCTTAAAGCAGATGCAAATGCATTT...CACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTTTTGTTTTTCTATTCTaGTCAGCACAGGAGTCTCCT +
Preference number: 4 (lower is better)
Translates to: GPLQSVCQSSKECPFRARFVFLF*SAQESP
Trigger: AGGAGACTCCTGTGCTGACCAGAATAGAAAAACAAA...ACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTGGGAGGAATGAATCCTaGCTGGAACTGAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PLILRVVPSPNIYLSLAAGRNES*LELSWS
Trigger: GCTCCAGCTCAGTTCCAGCCAGGATTCATTCCTCCC...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATGGGCCCAAGGGTCCTTaGTTCGTAGCACCATGGTTC +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHGPKGP*FVAPWF
Trigger: GAACCATGGTGCTACGAACCAAGGACCCTTGGGCCC...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTTGTGCAAGAGATCCCTaGCCGAGGACCTTTGCAATC +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPCARDP*PRTFAI
Trigger: GATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACA...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTACAAAAGTTTAAAACATaGGTCCTAACTTTGGTGACC +
Preference number: 4 (lower is better)
Translates to: LCKRSLAEDLCNLCVSHLQKFKT*VLTLVT
Trigger: GGTCACCAAAGTTAGGACCCATGTTTTAAACTTTTG...TAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTGCTCAGGACACTCCCTaGACAATGGACGAAGCACTA +
Preference number: 4 (lower is better)
Translates to: LRVVPSPNIYLSLAAHQSAQDTP*TMDEAL
Trigger: TAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGC...ACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp GTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTaGAGAGCAAACCTTTTCAGGATACCTTACACACTA +
Preference number: 4 (lower is better)
Translates to: VTVTHRVKCPSS*RANLFRIPYTL
Trigger: TAGTGTGTAAGGTATCCTGAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTCAAGGGGAAAGTGCGTaGGGCTTGGTGTCCTATGGC +
Preference number: 4 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFQGESA*GLVSYG
Trigger: GCCATAGGACACCAAGCCTCACGCACTTTCCCCTTG...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATACGCGGGAGGAGAGCTaGTGCATCGCAATCATCTCT +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHTREES*CIAIIS
Trigger: AGAGATGATTGCGATGCAGCAGCTCTCCTCCCGCGT...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCTTGTGGTGAGCTCTaGCTGGTGCAGTCAGTCTGC +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSSCGEL*LVQSVC
Trigger: GCAGACTGACTGCACCAGGCAGAGCTCACCACAAGA...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATACAAAATGTGATTCGTaGCAGAAAGCTGTGTGTGAT +
Preference number: 4 (lower is better)
Translates to: KAQDTPWTMDEALVPIRHTKCDS*QKAVCD
Trigger: ATCACACACAGCTTTCTGGCACGAATCACATTTTGT...ATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp GTCCTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACATACGATCGATACATATaGCTGGGAGGAATTTCTGAG +
Preference number: 4 (lower is better)
Translates to: VLTGRSVMRTIHLLIRETYDRYI*LGGISE
Trigger: CTCAGAAATTCCTCCCAGCCATATGTATCGATCGTA...TGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAGGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTCATCGCAATCATCTCTaGGCTGTCCATCATGGAGTC +
Preference number: 4 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPHRNHL*AVHHGV
Trigger: GACTCCATGATGGACAGCCCAGAGATGATTGCGATG...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTGTAGTCCCAGCTACTTaGGAGGCCGAGGCAGACGAA +
Preference number: 4 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFVVPAT*EAEADE
Trigger: TTCGTCTGCCTCGGCCTCCCAAGTAGCTGGGACTAC...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp ACGGATATGAACTTCCATCATCCTGGAACTGGTGTCTaGGCTTTCATTTCTCTGTATCATGGATGCTTCCGA +
Preference number: 4 (lower is better)
Translates to: TDMNFHHPGTGV*AFISLYHGCFR
Trigger: TCGGAAGCATCCATGATACAGAGAAATGAAAGCCAAGACACCAGTTCCAGGATGATGGAAGTTCATATCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTGAGGAAGGAACTCCATaGGGTAGGAAGCCTGATTGT +
Preference number: 4 (lower is better)
Translates to: PLILRVVPSPNIYLSLAAEEGTP*GRKPDC
Trigger: ACAATCAGGCTTCCTACCTCATGGAGTTCCTTCCTC...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTCACTTCAAAGACCAGTaGAAGCTCAGGACACTCCCT +
Preference number: 4 (lower is better)
Translates to: IPEFSCSSKFKSTTPFLSHFKDQ*KLRTLP
Trigger: AGGGAGTGTCCTGAGCTTTCACTGGTCTTTGAAGTG...ACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTATACCCCCTTGTCTGTGGCTCGGATaGCAAGGAATTTTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: FSCSSKFKSTTPFLSIPPCLWLG*QGIFFL
Trigger: CAGGAAGAAAATTCCTTGGCATCCGAGCCACAGACA...AGGGGGTATACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATGACATCCACCTAGGATaGAACTCTGCCTTTGTGCGC +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHDIHLG*NSAFVR
Trigger: GCGCACAAAGGCAGAGTTGCATCCTAGGTGGATGTC...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATGCTTCCATCCTGACTTaGGCCACTTATCTGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHASILT*ATYLPK
Trigger: CTTGGGCAGATAAGTGGCCCAAGTCAGGATGGAAGC...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTAAAGCCTCCAGAATGTaGGTGGTTAGACTGAAAGCC +
Preference number: 4 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPKASRM*VVRLKA
Trigger: GGCTTTCAGTCTAACCACCCACATTCTGGAGGCTTT...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTATCCAGGGGAAGTGTTaGAGGCTTATGAGGCGGCAC +
Preference number: 4 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFIQGKC*RLMRRH
Trigger: GTGCCGCCTCATAAGCCTCCAACACTTCCCCTGGAT...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATACATGCTTCCATCCTaGCTTGGGCCACTTATCTGC +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSYMLPS*LGPLIC
Trigger: GCAGATAAGTGGCCCAAGTCAGGATGGAAGCATGTA...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCACTTCTAGTAGTCTCCTaGGAGCAGTCTGCCTCCAAT +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSLLVVS*EQSASN
Trigger: ATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAG...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTAACAGAATCTCCTCCTaGAGTTTCTTCCGTTTTGGG +
Preference number: 4 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPNRISS*SFFRFG
Trigger: CCCAAAACGGAAGAAACTGCAGGAGGAGATTCTGTT...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp GTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTTGAGAGCAAACCTTTTCAAGGAATTTTCTTCCTaGTTTTCACTCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: VTVTHRVKCPSSLRANLFKEFSS*FSLNRI
Trigger: GATTCTGTTGAGTGAAAAGCAGGAAGAAAATTCCTT...GAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTAAAACCAAGGTTCTCTaGAAGCAGGTTGGGGTTCTT +
Preference number: 4 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPKTKVL*KQVGVL
Trigger: AAGAACCCCAACCTGCTTGCAGAGAACCTTGGTTTT...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTGAATTGGGGTCCAGATaGGAAAGTTCTGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFELGSR*ESSGGS
Trigger: GCTCCCTCCAGAACTTTCCCATCTGGACCCCAATTC...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATGGCTGGAACTGAGCTaGAGCATACATGCTTCCATC +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSWLELS*SIHASI
Trigger: GATGGAAGCATGTATGCTCCAGCTCAGTTCCAGCCA...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCACACAGCCTTGCAGACTaGCCATGGCATTCTTATCTG +
Preference number: 4 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSHSLAD*PWHSYL
Trigger: CAGATAAGAATGCCATGGCCAGTCTGCAAGGCTGTG...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCATTCTGAAGGCTGGCTaGCCACTAAGGAAACACAGT +
Preference number: 4 (lower is better)
Translates to: SPNIYLSLAAHQSLKAPLILKAG*PLRKHS
Trigger: ACTGTGTTTCCTTAGTGGCCAGCCAGCCTTCAGAAT...GAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATGAGAAAGGCTGTCAGTaGCCAAATTCTCTGGGCCTA +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHEKGCQ*PNSLGL
Trigger: TAGGCCCAGAGAATTTGGCCACTGACAGCCTTTCTC...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
3UTR CAA 72 bp TTGGAAAAGTCATCATTAACTCCACGTTCATTAGTTTaGCCTGACTGTCTACATCAGCTGTGCAAGAGATCC +
Preference number: 4 (lower is better)
Translates to: LEKSSLTPRSLV*PDCLHQLCKRS
Trigger: GGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAATGATGACTTTTCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.12
ENST00000342247.9
ENST00000355219.3
ENST00000400585.6
ENST00000612582.1
CDS-3UTR TCA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTCACAAACACAGAAACTaGAGTAGTAATGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPHKHRN*SSNAPC
Trigger: ACATGGGGCATTACTACTTCAGTTTCTGTGTTTGTG...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp AAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCCGATCCACAAGGAGATaGTTCCCCAATGACTCCGTT +
Preference number: 4 (lower is better)
Translates to: KYIPEFSCSSKFKSTTPFRSTRR*FPNDSV
Trigger: AACGGAGTCATTGGGGAAGCATCTCCTTGTGGATCG...GAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTGACTTTAGCAGCCACTaGATCCATACGGGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFDFSSH*IHTGWR
Trigger: TCTCCAACCCGTATGGATGCAGTGGCTGCTAAAGTC...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTTCATCTTCTAATACGTaGAACACTCTAGCGATCCCA +
Preference number: 4 (lower is better)
Translates to: PLILRVVPSPNIYLSLAASSSNT*NTLAIP
Trigger: TGGGATCGCTAGAGTGTTTCACGTATTAGAAGATGA...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATAAGAGAGTTCTCCATTaGATTTTCCTTGCACCGGGT +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHKRVLH*IFLAPG
Trigger: ACCCGGTGCAAGGAAAATCCAATGGAGAACTCTCTT...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATGGATTGGGCAGTACATaGCTCACTAATATATGGGAC +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHGLGST*LTNIWD
Trigger: GTCCCATATATTAGTGAGCCATGTACTGCCCAATCC...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATAATGTCCTTCTAGCTTaGGAGCAAACCTTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHNVLLA*EQTFSG
Trigger: TCCTGAAAAGGTTTGCTCTCAAGCTAGAAGGACATT...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp TTAACTCCACGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATTACAAATTCCTCCTTaGTACAGTATAAACCTCCAT +
Preference number: 4 (lower is better)
Translates to: LTPRSLVLPDCLHQLCKRLQIPP*YSINLH
Trigger: ATGGAGGTTTATACTGTACCAAGGAGGAATTTGTAA...TCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR TCA 90 bp ATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTACTAAAGGTGAGCCATaGGTGTTAAATCAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: IPEFSCSSKFKSTTPFLSTKGEP*VLNQRD
Trigger: ATCTCTTTGATTTAACACTCATGGCTCACCTTTAGT...ACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR GCA 90 bp CCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTATACCTGAGTTTAGCTaGTCATCAAAGTTTAAAAGC +
Preference number: 4 (lower is better)
Translates to: PLILRVVPSPNIYLSLAAIPEFS*SSKFKS
Trigger: GCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT...AGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CCA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTTCATCATTGCCCGATaGAAACACCTCTCTAAATTA +
Preference number: 4 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHFIIAR*KHLSKL
Trigger: TAATTTAGAGAGGTGTTTCCATCGGGCAATGATGAA...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS CCA 90 bp CCACCAGGAGCGGAGCTCGCCCAGCCCGGCCGCGCCGCCCTCCTCTaGGCACATCTCCCCGCTGCGGCACAGGCGGCGGCCCCTCGCTGC +
Preference number: 5 (lower is better)
Translates to: PPGAELAQPGRAALL*AHLPAAAQAAAPRC
Trigger: GCAGCGAGGGGCCGCCGCCTGTGCCGCAGCGGGGAGATGTGCCCAGAGGAGGGCGGCGCGGCCGGGCTGGGCGAGCTCCGCTCCTGGTGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS CCA 90 bp CGGGCAGGCGGAACGCGGTGCGAAAGAGCGAGCAGAAGTGCGCGATaGCCGGGACCTCCCACCAGGAGCGGAGCTCGCCCAGCCCGGCCG +
Preference number: 5 (lower is better)
Translates to: RAGGTRCERASRSAR*PGPPTRSGARPARP
Trigger: CGGCCGGGCTGGGCGAGCTCCGCTCCTGGTGGGAGGTCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCCGCCTGCCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS GCA 90 bp TCGAAGTCGGGCAGGCGGAACGCGGTGCGAAAGAGCGAGCAGAAGTaGGCGATGGCCGGGACCTCCCACCAGGAGCGGAGCTCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: SKSGRRNAVRKSEQK*AMAGTSHQERSSPS
Trigger: GCTGGGCGAGCTCCGCTCCTGGTGGGAGGTCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCCGCCTGCCCGACTTCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS GCA 90 bp CTCGGCCATTGGAAGTGCCCACCTCCCGCGGGGGCTGTGTGGAGCTaGTGCTCTGATCGTCCCCAGAAGAGGGCGCTCGGCGTGTGGGGG +
Preference number: 5 (lower is better)
Translates to: LGHWKCPPPAGAVWS*CSDRPQKRALGVWG
Trigger: CCCCCACACGCCGAGCGCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCACACAGCCCCCGCGGGAGGTGGGCACTTCCAATGGCCGAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp CCTGTCTGCCACCGTGGAGAGGTCTCTCACGCACCCTTGGGCGGCTaGGCCGGGGTAGCTGCTATCCGAGGGCCAGGGATTCTTGCCCTT +
Preference number: 5 (lower is better)
Translates to: PVCHRGEVSHAPLGG*AGVAAIRGPGILAL
Trigger: AAGGGCAAGAATCCCTGGCCCTCGGATAGCAGCTACCCCGGCCCAGCCGCCCAAGGGTGCGTGAGAGACCTCTCCACGGTGGCAGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp CTGGGTGGTGAGGTGGGAGGGCAGCCACAGGGGAAGAGTAAGCCCTaGGCTGAAAGTGACTGGCCGGCCGCTGAGGGGTATAGGGAGGCC +
Preference number: 5 (lower is better)
Translates to: LGGEVGGQPQGKSKP*AESDWPAAEGYREA
Trigger: GGCCTCCCTATACCCCTCAGCGGCCGGCCAGTCACTTTCAGCCCAGGGCTTACTCTTCCCCTGTGGCTGCCCTCCCACCTCACCACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp CTTCTTCCTGGCAGCGATAGATGGGACCCTCCTGAGAGAGGCCGTTaGGCTGGGTGGCCCCTGGGTGGTGAGGTGGGAGGGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: LLPGSDRWDPPERGR*AGWPLGGEVGGQPQ
Trigger: CTGTGGCTGCCCTCCCACCTCACCACCCAGGGGCCACCCAGCCCAACGGCCTCTCTCAGGAGGGTCCCATCTATCGCTGCCAGGAAGAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS GCA 90 bp CGGCTTCTAACTCCTCGATCTCGAAGTCGGGCAGGCGGAACGCGGTaGGAAAGAGCGAGCAGAAGTGCGCGATGGCCGGGACCTCCCACC +
Preference number: 5 (lower is better)
Translates to: RLLTPRSRSRAGGTR*ERASRSARWPGPPT
Trigger: GGTGGGAGGTCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCCGCCTGCCCGACTTCGAGATCGAGGAGTTAGAAGCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS GCA 90 bp GCGGGGGAAACTGGCTCACAGTGCCTCCCGTCAAACCGGGGTCTGTaGTGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATGGCATGGTTT +
Preference number: 5 (lower is better)
Translates to: AGETGSQCLPSNRGL*WAVSLRSVPCMAWF
Trigger: AAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTCCCCCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 90 bp CACAGTGCCTCCCGTCAAACCGGGGTCTGTGCTGGGCGGTGTCGCTaGGTTCTGTCCCGTGCATGGCATGGTTTCCTGCAACGTTCTGCC +
Preference number: 5 (lower is better)
Translates to: HSASRQTGVCAGRCR*VLSRAWHGFLQRSA
Trigger: GGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 90 bp GGTACTCTAGGCCAGGCATATACAGCGGGGGAAACTGGCTCACAGTaGCTCCCGTCAAACCGGGGTCTGTGCTGGGCGGTGTCGCTGCGT +
Preference number: 5 (lower is better)
Translates to: GTLGQAYTAGETGSQ*LPSNRGLCWAVSLR
Trigger: ACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTCCCCCGCTGTATATGCCTGGCCTAGAGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp TGTTTCCTGCTGGACCCTTCTGGGTCCCTGGAGCGGGTCCAAACATaGCTCCCACCACTTCGCCCAGCCCGACTCCGTCTTTTCTCCCGC +
Preference number: 5 (lower is better)
Translates to: CFLLDPSGSLERVQT*LPPLRPARLRLFSR
Trigger: GCGGGAGAAAAGACGGAGTCGGGCTGGGCGAAGTGGTGGGAGCCATGTTTGGACCCGCTCCAGGGACCCAGAAGGGTCCAGCAGGAAACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GGAATCCATCACGTGACCGAGAGTGCGAGGCTGGTGAGAGGGTCCTaGCCCCAGGTGGGGCTTCTCATCTGGGCCCAAGGGTCCTTGGTT +
Preference number: 5 (lower is better)
Translates to: GIHHVTESARLVRGS*PQVGLLIWAQGSLV
Trigger: AACCAAGGACCCTTGGGCCCAGATGAGAAGCCCCACCTGGGGCCAGGACCCTCTCACCAGCCTCGCACTCTCGGTCACGTGATGGATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp ACCGGGGTCTGTGCTGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATaGCATGGTTTCCTGCAACGTTCTGCCTCTGGGGCAGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: TGVCAGRCRCVLSRA*HGFLQRSASGAEQL
Trigger: AAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GGGGAAACTGGCTCACAGTGCCTCCCGTCAAACCGGGGTCTGTGCTaGGCGGTGTCGCTGCGTTCTGTCCCGTGCATGGCATGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: GETGSQCLPSNRGLC*AVSLRSVPCMAWFP
Trigger: AGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 90 bp GTGCCCTCCCAGGGTTGCCCAGGGCAGGCTTGGGGGCTGACACAGTaGCTGACATTGGGTGAGCTACCTGCGGAAAAGGGCCAGGTAAAC +
Preference number: 5 (lower is better)
Translates to: VPSQGCPGQAWGLTQ*LTLGELPAEKGQVN
Trigger: GTTTACCTGGCCCTTTTCCGCAGGTAGCTCACCCAATGTCAGTCACTGTGTCAGCCCCCAAGCCTGCCCTGGGCAACCCTGGGAGGGCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 90 bp TCAAACCGGGGTCTGTGCTGGGCGGTGTCGCTGCGTTCTGTCCCGTaGATGGCATGGTTTCCTGCAACGTTCTGCCTCTGGGGCAGAGCA +
Preference number: 5 (lower is better)
Translates to: SNRGLCWAVSLRSVP*MAWFPATFCLWGRA
Trigger: TGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GGTGCAGGATCTCCACCCGTGTGCGAAGAGGCAGGTCCTGGAAACTaGCTTCCCTCAGAGGGTTGGGCTTCCCTTCTTCGAGCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: GAGSPPVCEEAGPGN*LPSEGWASLLRAPS
Trigger: GCTGGGAGCTCGAAGAAGGGAAGCCCAACCCTCTGAGGGAAGCCAGTTTCCAGGACCTGCCTCTTCGCACACGGGTGGAGATCCTGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000497534.1
ENST00000612582.1
CDS CCA 90 bp TGGAGCTGCTGCTCTGATCGTCCCCAGAAGAGGGCGCTCGGCGTGTaGGGGGCAACGACTTTCCTCCATTCTCCATGGGCTGCTGTTTCC +
Preference number: 5 (lower is better)
Translates to: WSCCSDRPQKRALGV*GATTFLHSPWAAVS
Trigger: GGAAACAGCAGCCCATGGAGAATGGAGGAAAGTCGTTGCCCCCCACACGCCGAGCGCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GCTCCCCGGGGTGTGGCTCCGGGACTCCAGAGGAGCCATACAAGGTaGCAGGATCTGATCCTCGCAGAGGGCCAAATGTTCCTGGTACTG +
Preference number: 5 (lower is better)
Translates to: APRGVAPGLQRSHTR*QDLILAEGQMFLVL
Trigger: CAGTACCAGGAACATTTGGCCCTCTGCGAGGATCAGATCCTGCCACCTTGTATGGCTCCTCTGGAGTCCCGGAGCCACACCCCGGGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GGTCTGTGCTGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATGGCATaGTTTCCTGCAACGTTCTGCCTCTGGGGCAGAGCAGCTTTTCGG +
Preference number: 5 (lower is better)
Translates to: GLCWAVSLRSVPCMA*FPATFCLWGRAAFR
Trigger: CCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GGGGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACGCCGAGATCGTGCCATaGCACTCCAGTCTGGGGGAC +
Preference number: 5 (lower is better)
Translates to: GVEQVMGIELTGHSPVLHAEIVP*HSSLGD
Trigger: GTCCCCCAGACTGGAGTGCAATGGCACGATCTCGGC...GTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS GCA 90 bp TGGAGAGGTCTCTCACGCACCCTTGGGCGGCTGGGCCGGGGTAGCTaGTATCCGAGGGCCAGGGATTCTTGCCCTTCATTGCTTTACAGT +
Preference number: 5 (lower is better)
Translates to: WRGLSRTLGRLGRGS*YPRARDSCPSLLYS
Trigger: ACTGTAAAGCAATGAAGGGCAAGAATCCCTGGCCCTCGGATAGCAGCTACCCCGGCCCAGCCGCCCAAGGGTGCGTGAGAGACCTCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 90 bp CTGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATGGCATGGTTTCCTaGAACGTTCTGCCTCTGGGGCAGAGCAGCTTTTCGGAACCACTG +
Preference number: 5 (lower is better)
Translates to: LGGVAAFCPVHGMVS*NVLPLGQSSFSEPL
Trigger: CAGTGGTTCCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp CAGAGTCGGTGCAGGATCTCCACCCGTGTGCGAAGAGGCAGGTCCTaGAAACTGGCTTCCCTCAGAGGGTTGGGCTTCCCTTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: QSRCRISTRVRRGRS*KLASLRGLGFPSSS
Trigger: GCTCGAAGAAGGGAAGCCCAACCCTCTGAGGGAAGCCAGTTTCCAGGACCTGCCTCTTCGCACACGGGTGGAGATCCTGCACCGACTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000497534.1
ENST00000612582.1
CDS CCA 90 bp GGGGCAACGACTTTCCTCCATTCTCCATGGGCTGCTGTTTCCTGCTaGACCCTTCTGGGTCCCTGGAGCGGGTCCAAACATGGCTCCCAC +
Preference number: 5 (lower is better)
Translates to: GATTFLHSPWAAVSC*TLLGPWSGSKHGSH
Trigger: GTGGGAGCCATGTTTGGACCCGCTCCAGGGACCCAGAAGGGTCCAGCAGGAAACAGCAGCCCATGGAGAATGGAGGAAAGTCGTTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GGTCCTGGCCCCAGGTGGGGCTTCTCATCTGGGCCCAAGGGTCCTTaGTTCGTAGCACCATGGTTCCCATTCCAGACGGCAGAGTGTACT +
Preference number: 5 (lower is better)
Translates to: GPGPRWGFSSGPKGP*FVAPWFPFQTAECT
Trigger: AGTACACTCTGCCGTCTGGAATGGGAACCATGGTGCTACGAACCAAGGACCCTTGGGCCCAGATGAGAAGCCCCACCTGGGGCCAGGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GCTGAATTCGGGTACTCTAGGCCAGGCATATACAGCGGGGGAAACTaGCTCACAGTGCCTCCCGTCAAACCGGGGTCTGTGCTGGGCGGT +
Preference number: 5 (lower is better)
Translates to: AEFGYSRPGIYSGGN*LTVPPVKPGSVLGG
Trigger: ACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTCCCCCGCTGTATATGCCTGGCCTAGAGTACCCGAATTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGGGTGCCCTCCCAGGGTaGCCCAGGGCAGGCTTGGGG +
Preference number: 5 (lower is better)
Translates to: GGKIRKGHHFLNLGHQHEGALPG*PRAGLG
Trigger: CCCCAAGCCTGCCCTGGGCAACCCTGGGAGGGCACC...CTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCTGGCTGGGGGTCCGCTaGGGCTTCCCTGGGGATGGA +
Preference number: 5 (lower is better)
Translates to: PQFSTFQSSCAAFHCLGLWLGVR*GFPGDG
Trigger: TCCATCCCCAGGGAAGCCCAAGCGGACCCCCAGCCA...GAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS GCA 90 bp CATCCAGCCGGTAATCACAGAGTCGGTGCAGGATCTCCACCCGTGTaGGAAGAGGCAGGTCCTGGAAACTGGCTTCCCTCAGAGGGTTGG +
Preference number: 5 (lower is better)
Translates to: HPAGNHRVGAGSPPV*EEAGPGNWLPSEGW
Trigger: CCAACCCTCTGAGGGAAGCCAGTTTCCAGGACCTGCCTCTTCGCACACGGGTGGAGATCCTGCACCGACTCTGTGATTACCGGCTGGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000497534.1
ENST00000612582.1
CDS GCA 90 bp TGGGTGCTGGCACTGGAGGTGGCTGTAACCGATGTCCGGCAGACTTaGAGGGCGGTCGCATGTACCCTGAGGAAGGAACTCCATGAGGTA +
Preference number: 5 (lower is better)
Translates to: WVLALEVAVTDVRQT*RAVACTLRKELHEV
Trigger: TACCTCATGGAGTTCCTTCCTCAGGGTACATGCGACCGCCCTGCAAGTCTGCCGGACATCGGTTACAGCCACCTCCAGTGCCAGCACCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGAAGAAGAAGATCCTGCTaGGGGATGGGTGGGCTAGGG +
Preference number: 5 (lower is better)
Translates to: SSSMARVGRREGVEQVMGRRRSC*GMGGLG
Trigger: CCCTAGCCCACCCATCCCCAAGCAGGATCTTCTTCT...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS TCA 90 bp GTGTGGCTCCGGGACTCCAGAGGAGCCATACAAGGTGGCAGGATCTaGTCCTCGCAGAGGGCCAAATGTTCCTGGTACTGCTGGCCTCAT +
Preference number: 5 (lower is better)
Translates to: VWLRDSRGAIQGGRI*SSQRAKCSWYCWPH
Trigger: ATGAGGCCAGCAGTACCAGGAACATTTGGCCCTCTGCGAGGATCAGATCCTGCCACCTTGTATGGCTCCTCTGGAGTCCCGGAGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 90 bp GAGGGAGCTCCTTTCCTTGAGCCAGCAGCCATGCCCTTTCTTCCCTaGGCTTTCTCCTCTTCGCTCGATCCACAGGACGGCTGGTCGACA +
Preference number: 5 (lower is better)
Translates to: EGAPFLEPAAMPFLP*AFSSSLDPQDGWST
Trigger: TGTCGACCAGCCGTCCTGTGGATCGAGCGAAGAGGAGAAAGCTCAGGGAAGAAAGGGCATGGCTGCTGGCTCAAGGAAAGGAGCTCCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342247.10
CDS GCA 90 bp TCGCTGCGTTCTGTCCCGTGCATGGCATGGTTTCCTGCAACGTTCTaGCTCTGGGGCAGAGCAGCTTTTCGGAACCACTGCTACCAAGGC +
Preference number: 5 (lower is better)
Translates to: SLRSVPCMAWFPATF*LWGRAAFRNHCYQG
Trigger: GCCTTGGTAGCAGTGGTTCCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 90 bp CTTTCTCCTCTTCGCTCGATCCACAGGACGGCTGGTCGACAGACATaGACCTCTCCAGACCACGCGGACACTGCACATACCTTCCACTGC +
Preference number: 5 (lower is better)
Translates to: LSPLRSIHRTAGRQT*TSPDHADTAHTFHC
Trigger: GCAGTGGAAGGTATGTGCAGTGTCCGCGTGGTCTGGAGAGGTGCATGTCTGTCGACCAGCCGTCCTGTGGATCGAGCGAAGAGGAGAAAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342247.10
CDS CCA 90 bp CGTTCTGTCCCGTGCATGGCATGGTTTCCTGCAACGTTCTGCCTCTaGGGCAGAGCAGCTTTTCGGAACCACTGCTACCAAGGCCCTTCC +
Preference number: 5 (lower is better)
Translates to: RSVPCMAWFPATFCL*GRAAFRNHCYQGPS
Trigger: GGAAGGGCCTTGGTAGCAGTGGTTCCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GTGACTGGCTCCAGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGTGCTTCCATCCTGACTaGGGCCACTTATCTGCCCAA +
Preference number: 5 (lower is better)
Translates to: VTGSSSSMARVGRREGVECFHPD*GHLSAQ
Trigger: TTGGGCAGATAAGTGGCCCAAGTCAGGATGGAAGCA...CTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCTGGAGCCAGTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp AGCTCAAGTATGGCACGAGTGGGTCGCCGTGAAGGGGTGGAGCAGGTGATGGGATGCAACACTGGGATTTaGTGGGCCTGGGATGGCATC +
Preference number: 5 (lower is better)
Translates to: SSSMARVGRREGVEQVMGCNTGI*WAWDGI
Trigger: GATGCCATCCCAGGCCCACAAAATCCCAGTGTTGCA...TCCCATCACCTGCTCCACCCCTTCACGGCGACCCACTCGTGCCATACTTGAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS TCA 90 bp AGAGCTGCCGTTCTCGAAGGGAGGTCCTCTCGCGAAAACTCTCGGTaGCCTGTCTCCATTCCTCTTCTGTCTGGCACAGGAGCCACCAAG +
Preference number: 5 (lower is better)
Translates to: RAAVLEGRSSRENSR*PVSIPLLSGTGATK
Trigger: CTTGGTGGCTCCTGTGCCAGACAGAAGAGGAATGGAGACAGGTCACCGAGAGTTTTCGCGAGAGGACCTCCCTTCGAGAACGGCAGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp TCCTGGCTGGAACTGAGCTGGAGCATACATGCTTCCATCCTGACTTaGGCCACTTATCTGCCCAAGCTGCAAGGATCCAGGGTGTGGGCC +
Preference number: 5 (lower is better)
Translates to: SWLELSWSIHASILT*ATYLPKLQGSRVWA
Trigger: GGCCCACACCCTGGATCCTTGCAGCTTGGGCAGATAAGTGGCCCAAGTCAGGATGGAAGCATGTATGCTCCAGCTCAGTTCCAGCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GTAGGAAGGCTGTGGCGGTGGGTGGTAGGAATACCTCATTCCTTGTaGGGGGCGATACCGGGGAAAGCCTCCAGAATGTGGGTGGTTAGA +
Preference number: 5 (lower is better)
Translates to: VGRLWRWVVGIPHSL*GAIPGKASRMWVVR
Trigger: TCTAACCACCCACATTCTGGAGGCTTTCCCCGGTATCGCCCCCCACAAGGAATGAGGTATTCCTACCACCCACCGCCACAGCCTTCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTTGGGACCCATGTCTaGTCTGTGGCTCGGATGCCA +
Preference number: 5 (lower is better)
Translates to: ATSMREQPVFRAEASSSLLGTHV*SVARMP
Trigger: TGGCATCCGAGCCACAGACAAGACATGGGTCCCAAG...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACAGGGAGCTCCTTTCCTaGAGCCAGCAGCCATGCCCT +
Preference number: 5 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHRELLS*SQQPCP
Trigger: AGGGCATGGCTGCTGGCTCAAGGAAAGGAGCTCCCT...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp AAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATGGCACGAGTTCGGAGGAGCTGCTTTaGAGCTCCGGGCCCACTGTT +
Preference number: 5 (lower is better)
Translates to: KECPFRARDWLQLKYGTSSEELL*SSGPTV
Trigger: AACAGTGGGCCCGGAGCTCAAAAGCAGCTCCTCCGA...ACTCGTGCCATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS GCA 90 bp TCCTCCTGTGATGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTaGGACTGGACCGGGTGCATCTGCATTCCTGATGGTCTGTACATT +
Preference number: 5 (lower is better)
Translates to: SSCDVAAVGVFGNEA*DWTGCICIPDGLYI
Trigger: AATGTACAGACCATCAGGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp TGTGATGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTGCGACTaGACCGGGTGCATCTGCATTCCTGATGGTCTGTACATTTCCTGG +
Preference number: 5 (lower is better)
Translates to: CDVAAVGVFGNEACD*TGCICIPDGLYISW
Trigger: CCAGGAAATGTACAGACCATCAGGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGGAAAAACCTCGGCCATaGGAAGTGCCCACCTCCCGC +
Preference number: 5 (lower is better)
Translates to: VYISCARDPWPRTFAICVEKPRP*EVPTSR
Trigger: GCGGGAGGTGGGCACTTCCAATGGCCGAGGTTTTTC...CACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS GCA 90 bp TGCTTGACGGGTTTGATGGACAGGTGGTCAGACATCCACCTAGGATaGAACTCTGCCTTTGTGCGCTGTGGACGTTTTCCCTTCTGGGCG +
Preference number: 5 (lower is better)
Translates to: CLTGLMDRWSDIHLG*NSAFVRCGRFPFWA
Trigger: CGCCCAGAAGGGAAAACGTCCACAGCGCACAAAGGCAGAGTTGCATCCTAGGTGGATGTCTGACCACCTGTCCATCAAACCCGTCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp TGGGGCTTCTCATCTGGGCCCAAGGGTCCTTGGTTCGTAGCACCATaGTTCCCATTCCAGACGGCAGAGTGTACTCGATTCAGGTACTTG +
Preference number: 5 (lower is better)
Translates to: WGFSSGPKGPWFVAP*FPFQTAECTRFRYL
Trigger: CAAGTACCTGAATCGAGTACACTCTGCCGTCTGGAATGGGAACCATGGTGCTACGAACCAAGGACCCTTGGGCCCAGATGAGAAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp AGCCGAGCCCGGAACAGTCCCTCCGCACATCTGTCTAGCACAGAGCAGGATCAATATAGTGCCCCAGAATaGTCTTCACCCAATGGCTCC +
Preference number: 5 (lower is better)
Translates to: SRARNSPSAHLSSTEQDQYSAPE*SSPNGS
Trigger: GGAGCCATTGGGTGAAGACAATTCTGGGGCACTATA...TTGATCCTGCTCTGTGCTAGACAGATGTGCGGAGGGACTGTTCCGGGCTCGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGTGGGCCCAAGGGTCCTaGGTTCGTAGCACCATGGTT +
Preference number: 5 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLWAQGS*VRSTMV
Trigger: AACCATGGTGCTACGAACCAAGGACCCTTGGGCCCA...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGTTGCCCAGGGCAGGCTaGGGGGCTGACACAGTGACT +
Preference number: 5 (lower is better)
Translates to: AKSGRDTTFSIWATSMRELPRAG*GADTVT
Trigger: AGTCACTGTGTCAGCCCCCAAGCCTGCCCTGGGCAA...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACGATCCAGGGGAAGTGTaGGAGGCTTATGAGGCGGCA +
Preference number: 5 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHDPGEV*EAYEAA
Trigger: TGCCGCCTCATAAGCCTCCAACACTTCCCCTGGATC...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAGCACCACTCCATTCTaGAGTATACCCCCTCCCCCA +
Preference number: 5 (lower is better)
Translates to: VCQSSKECPFRARDWLQLSTTPF*SIPPPP
Trigger: TGGGGGAGGGGGTATACTCAAGAATGGAGTGGTGCT...GAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp AGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTATAAGGCATGGTGTAGTCCCAGCTACTaGGGAGGCCGAGGCAGACGA +
Preference number: 5 (lower is better)
Translates to: SSGHSLDNGRSTSTYKAWCSPSY*GGRGRR
Trigger: TCGTCTGCCTCGGCCTCCCAAGTAGCTGGGACTACA...CCATGCCTTATAGGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS TCA 90 bp GAATTGGGGTCCAGATGGGAAAGTTCTGGAGGGAGCTCCTTTCCTTaGGCCAGCAGCCATGCCCTTTCTTCCCTGAGCTTTCTCCTCTTC +
Preference number: 5 (lower is better)
Translates to: ELGSRWESSGGSSFP*ASSHALSSLSFLLF
Trigger: GAAGAGGAGAAAGCTCAGGGAAGAAAGGGCATGGCTGCTGGCTCAAGGAAAGGAGCTCCCTCCAGAACTTTCCCATCTGGACCCCAATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 90 bp CCTTCATTGCTTTACAGTTGTCCGCAGATTCGGAGGAGCTGCTTTTaGGCTCCGGGCCCACTGTTTCCCTTTCTTGTGGTGAGCTCTGCC +
Preference number: 5 (lower is better)
Translates to: PSLLYSCPQIRRSCF*APGPLFPFLVVSSA
Trigger: GGCAGAGCTCACCACAAGAAAGGGAAACAGTGGGCCCGGAGCTCAAAAGCAGCTCCTCCGAATCTGCGGACAACTGTAAAGCAATGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 90 bp CACCTCTCCAGACCACGCGGACACTGCACATACCTTCCACTGCCTTaGCCTTCTCCTCCAACTCGCGTTTCCTCTCTTCCTTTAGCATCT +
Preference number: 5 (lower is better)
Translates to: HLSRPRGHCTYLPLP*PSPPTRVSSLPLAS
Trigger: AGATGCTAAAGGAAGAGAGGAAACGCGAGTTGGAGGAGAAGGTCAAGGCAGTGGAAGGTATGTGCAGTGTCCGCGTGGTCTGGAGAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342247.10
CDS CCA 90 bp GTCAGCACAGGAGTCTCCTCTTGCTTGACGGGTTTGATGGACAGGTaGTCAGACATCCACCTAGGATGCAACTCTGCCTTTGTGCGCTGT +
Preference number: 5 (lower is better)
Translates to: VSTGVSSCLTGLMDR*SDIHLGCNSAFVRC
Trigger: ACAGCGCACAAAGGCAGAGTTGCATCCTAGGTGGATGTCTGACCACCTGTCCATCAAACCCGTCAAGCAAGAGGAGACTCCTGTGCTGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp GCTTCCCTGGGGATGGAGAGGTCTCTGCCAGTCAGAAAAGCTCTGTaGACAGGCATAGTAAGGAGTTCGCTGATAGTGGTGGTAGGAAGG +
Preference number: 5 (lower is better)
Translates to: ASLGMERSLPVRKAL*TGIVRSSLIVVVGR
Trigger: CCTTCCTACCACCACTATCAGCGAACTCCTTACTATGCCTGTCCACAGAGCTTTTCTGACTGGCAGAGACCTCTCCATCCCCAGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GCAACCTTGCAGCTCCAGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTGGCTTCCCTCAGAGGGTaGGGCTTCCCTTCTTCGAGC +
Preference number: 5 (lower is better)
Translates to: ATLQLQTAYSRSALQRPVASLRG*GFPSSS
Trigger: GCTCGAAGAAGGGAAGCCCAACCCTCTGAGGGAAGC...CACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGGGAGTCTCCTCTTGCTaGACGGGTTTGATGGACAGG +
Preference number: 5 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLGVSSC*TGLMDR
Trigger: CCTGTCCATCAAACCCGTCAAGCAAGAGGAGACTCC...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp TTAACTCCACGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGAGTCTCTCACGCACCCTaGGGCGGCTGGGCCGGGGTA +
Preference number: 5 (lower is better)
Translates to: LTPRSLVLPDCLHQLCKRVSHAP*GGWAGV
Trigger: TACCCCGGCCCAGCCGCCCAAGGGTGCGTGAGAGAC...TCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACGTGGAGTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS GCA 90 bp GGGTTTGATGGACAGGTGGTCAGACATCCACCTAGGATGCAACTCTaGCTTTGTGCGCTGTGGACGTTTTCCCTTCTGGGCGATCATGTT +
Preference number: 5 (lower is better)
Translates to: GFDGQVVRHPPRMQL*LCALWTFSLLGDHV
Trigger: AACATGATCGCCCAGAAGGGAAAACGTCCACAGCGCACAAAGGCAGAGTTGCATCCTAGGTGGATGTCTGACCACCTGTCCATCAAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp AAGTTAAGGCAGCATTCAGTGTCTCACAGCCTTGCAGACTGGCCATaGCATTCTTATCTGAGAAGAGGGACCTTGGTGGGGGAGGCTGAC +
Preference number: 5 (lower is better)
Translates to: KLRQHSVSHSLADWP*HSYLRRGTLVGEAD
Trigger: GTCAGCCTCCCCCACCAAGGTCCCTCTTCTCAGATAAGAATGCCATGGCCAGTCTGCAAGGCTGTGAGACACTGAATGCTGCCTTAACTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp TACTCGCTGGCTGACAACGAGCTCTGCCGCTTGGTAGCTGCGTTATaGTTGTCCAGGTCTAAAAATTCTTTGGGACTCTCTGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: YSLADNELCRLVAAL*LSRSKNSLGLSGLS
Trigger: GGAGAGGCCAGAGAGTCCCAAAGAATTTTTAGACCTGGACAACCATAACGCAGCTACCAAGCGGCAGAGCTCGTTGTCAGCCAGCGAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp GAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCATTCCATCATCACAGCTaGAAAGTGACCCAGGCCTTC +
Preference number: 5 (lower is better)
Translates to: EQVMGIELTGHSPVLHIPFHHHS*KVTQAF
Trigger: GAAGGCCTGGGTCACTTTCAAGCTGTGATGATGGAA...TGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGCACTCCCCAGTTCTCCACATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGCAGCTTTCCATTGCTaGGGGCTCATTTCCTCCTTG +
Preference number: 5 (lower is better)
Translates to: GTPQFSTFQSSCAAFHCLAAFHC*GLISSL
Trigger: CAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGC...CAAGCAATGGAAAGCTGCACACGAAGACTGGAATGTGGAGAACTGGGGAGTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGGGTGGAGCAGGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATCTGCTTAAGACACTaGGAAAGAGAAGTGCTAGAG +
Preference number: 5 (lower is better)
Translates to: GVEQVMGIELTGHSPVLHICLRH*EREVLE
Trigger: CTCTAGCACTTCTCTTTCCAAGTGTCTTAAGCAGAT...GTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACCTGCTCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACTCCCAGGAGCCCCCGGATaGGGCAGTACATGGCTCACT +
Preference number: 5 (lower is better)
Translates to: LTGRSVMRTIHLLIRETLPGAPG*GSTWLT
Trigger: AGTGAGCCATGTACTGCCCAATCCGGGGGCTCCTGG...GAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS GCA 90 bp ACCTTGGCCTGGCCCTTGGGACCCATGTCTTGTCTGTGGCTCGGATaGCAAGGAATTTTCTTCCTGCTTTTCACTCAACAGAATCTCCTC +
Preference number: 5 (lower is better)
Translates to: TLAWPLGPMSCLWLG*QGIFFLLFTQQNLL
Trigger: GAGGAGATTCTGTTGAGTGAAAAGCAGGAAGAAAATTCCTTGGCATCCGAGCCACAGACAAGACATGGGTCCCAAGGGCCAGGCCAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp TTGGAGAAGTTAAGGCAGCATTCAGTGTCTCACAGCCTTGCAGACTaGCCATGGCATTCTTATCTGAGAAGAGGGACCTTGGTGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LEKLRQHSVSHSLAD*PWHSYLRRGTLVGE
Trigger: CTCCCCCACCAAGGTCCCTCTTCTCAGATAAGAATGCCATGGCCAGTCTGCAAGGCTGTGAGACACTGAATGCTGCCTTAACTTCTCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp AAGACCAGTGAAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCTTCTGGGCGATCATGTaGCAGATCTCAGGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: KTSESSGHSLDNGRSTSTFWAIM*QISGRK
Trigger: CTTCCTGCCTGAGATCTGCAACATGATCGCCCAGAA...GGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGACTGGCTCCAGCTCAAGTATCACAGGAGTCTCCTCTaGCTTGACGGGTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: QSSKECPFRARDWLQLKYHRSLL*LDGFDG
Trigger: TCCATCAAACCCGTCAAGCAAGAGGAGACTCCTGTG...ATACTTGAGCTGGAGCCAGTCACGGGCCCTAAAAGGACACTCCTTAGATGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GCAACCTTGCAGCTCCAGACAGCTTATAGCAGATCTGCACTTCAAAGACCAGTGCGATCTTCCACTGCCTaGACCTTCTCCTCCAACTCG +
Preference number: 5 (lower is better)
Translates to: ATLQLQTAYSRSALQRPVRSSTA*TFSSNS
Trigger: CGAGTTGGAGGAGAAGGTCAAGGCAGTGGAAGATCG...CACTGGTCTTTGAAGTGCAGATCTGCTATAAGCTGTCTGGAGCTGCAAGGTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGAGGCAACGGCTCTGCTaGGTCATTCTCAGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: AKSGRDTTFSIWATSMRERQRLC*VILRLL
Trigger: CAAGAGCCTGAGAATGACCAAGCAGAGCCGTTGCCT...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACGATTCTTGCCCTTCATaGCTTTACAGTTGTCCGCAG +
Preference number: 5 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHDSCPS*LYSCPQ
Trigger: CTGCGGACAACTGTAAAGCAATGAAGGGCAAGAATC...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp AAGACCAGTGAAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCGAGGGCCAGGGATTCTaGCCCTTCATTGCTTTACAG +
Preference number: 5 (lower is better)
Translates to: KTSESSGHSLDNGRSTSTEGQGF*PFIALQ
Trigger: CTGTAAAGCAATGAAGGGCAAGAATCCCTGGCCCTC...GGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCAACGAGCTCTGCCGCTaGGTAGCTGCGTTATGGTTG +
Preference number: 5 (lower is better)
Translates to: RSLVLPDCLHQLCKRSLANELCR*VAALWL
Trigger: CAACCATAACGCAGCTACCAAGCGGCAGAGCTCGTT...GGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACAAAGAGAGTTCTCCATaGGATTTTCCTTGCACCGGG +
Preference number: 5 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHKESSP*DFPCTG
Trigger: CCCGGTGCAAGGAAAATCCAATGGAGAACTCTCTTT...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GCCACCAGCATGAGAGAGCAGCCTGTCTTCCGGGCTGAAGCTTCTAGTAGTCTCCTCCTCTTTGCGCTTTaGTTTTTCTATTCTGGTCAG +
Preference number: 5 (lower is better)
Translates to: ATSMREQPVFRAEASSSLLLFAL*FFYSGQ
Trigger: CTGACCAGAATAGAAAAACAAAAGCGCAAAGAGGAG...GAGACTACTAGAAGCTTCAGCCCGGAAGACAGGCTGCTCTCTCATGCTGGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCTGCATCCATACGGGTaGGAGAAGTTAAGGCAGCAT +
Preference number: 5 (lower is better)
Translates to: EIPGRGPLQSVCQSSKECLHPYG*EKLRQH
Trigger: ATGCTGCCTTAACTTCTCCAACCCGTATGGATGCAG...ACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CAGGTTCAGCATTTGCGTACGGATATGAACTTCCATCATCCTGGAACTGGTGTCCCTGGCCGAGGACCTTaGCAATCTGTGTGTCAGTCA +
Preference number: 5 (lower is better)
Translates to: QVQHLRTDMNFHHPGTGVPGRGP*QSVCQS
Trigger: TGACTGACACACAGATTGCAAAGGTCCTCGGCCAGG...GACACCAGTTCCAGGATGATGGAAGTTCATATCCGTACGCAAATGCTGAACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CGGGCTGAAGCTTCTAGTAGTCTCCTGAGAGCAGTCTGCCTCCAATGGAGACACCCACGTTCATTAGTTTaGCCTGACTGTCTACATCAG +
Preference number: 5 (lower is better)
Translates to: RAEASSSLLRAVCLQWRHPRSLV*PDCLHQ
Trigger: CTGATGTAGACAGTCAGGCAAAACTAATGAACGTGG...GTGTCTCCATTGGAGGCAGACTGCTCTCAGGAGACTACTAGAAGCTTCAGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS CCA 90 bp CAGAGTGTACTCGATTCAGGTACTTGTACGATCGATACATATGGCTaGGAGGAATTTCTGAGCTTTCAGGAAAGTCTGGTGGCCGGGCTG +
Preference number: 5 (lower is better)
Translates to: QSVLDSGTCTIDTYG*EEFLSFQESLVAGL
Trigger: CAGCCCGGCCACCAGACTTTCCTGAAAGCTCAGAAATTCCTCCCAGCCATATGTATCGATCGTACAAGTACCTGAATCGAGTACACTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 90 bp ACGGCAGAGTGTACTCGATTCAGGTACTTGTACGATCGATACATATaGCTGGGAGGAATTTCTGAGCTTTCAGGAAAGTCTGGTGGCCGG +
Preference number: 5 (lower is better)
Translates to: TAECTRFRYLYDRYI*LGGISELSGKSGGR
Trigger: CCGGCCACCAGACTTTCCTGAAAGCTCAGAAATTCCTCCCAGCCATATGTATCGATCGTACAAGTACCTGAATCGAGTACACTCTGCCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp CTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTCGATGTCCGGCAGACTaGCAGGGCGGTCGCATGTAC +
Preference number: 5 (lower is better)
Translates to: LRVVPSPNIYLSLAAHQSRCPAD*QGGRMY
Trigger: GTACATGCGACCGCCCTGCAAGTCTGCCGGACATCG...ACTTTGATGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTTCATTGCTTTACAGTaGTCCGCAGATTCGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QEIPGRGPLQSVCQSSKEFIALQ*SADSEE
Trigger: CTCCTCCGAATCTGCGGACAACTGTAAAGCAATGAA...CTCCTTAGATGACTGACACACAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CATTCCAGTCTTCGTGTGCAGCTTTCCATTGCTTGGGGCTCATTTCCTCCTTGGCTAGGAATCCTGGAATaGGAGGGAAACACTCTACTG +
Preference number: 5 (lower is better)
Translates to: HSSLRVQLSIAWGSFPPWLGILE*EGNTLL
Trigger: CAGTAGAGTGTTTCCCTCCAATTCCAGGATTCCTAG...CCAAGGAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACACGAAGACTGGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAGTCTTCCTGGAACTGGTGTCTaGGCTTTCATTTCTCTGTAT +
Preference number: 5 (lower is better)
Translates to: GDGNRADRALPSSPHSSLPGTGV*AFISLY
Trigger: ATACAGAGAAATGAAAGCCAAGACACCAGTTCCAGG...AAGACTGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CGTTCATTAGTTTTGCCTGACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCTCCATTGGATTTTCCTaGCACCGGGTCCTCTTTGTA +
Preference number: 5 (lower is better)
Translates to: RSLVLPDCLHQLCKRSLASIGFS*HRVLFV
Trigger: TACAAAGAGGACCCGGTGCAAGGAAAATCCAATGGA...GGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTCAGGCAAAACTAATGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACCAGCATGAGAGAGGCAGTTTCTTCCGTTTaGGGGGTCTTCCTCTTCTTT +
Preference number: 5 (lower is better)
Translates to: AKSGRDTTFSIWATSMREAVSSV*GVFLFF
Trigger: AAAGAAGAGGAAGACCCCCAAAACGGAAGAAACTGC...CTCTCTCATGCTGGTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGTGATGGGAATAGAGCTGACAGGGCACTCCCCAGTTCTCCACATTCCAGTCTTACTCGATTCAGGTACTaGTACGATCGATACATATGG +
Preference number: 5 (lower is better)
Translates to: GDGNRADRALPSSPHSSLTRFRY*YDRYIW
Trigger: CCATATGTATCGATCGTACAAGTACCTGAATCGAGT...AAGACTGGAATGTGGAGAACTGGGGAGTGCCCTGTCAGCTCTATTCCCATCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GACTGTCTACATCAGCTGTGCAAGAGATCCCTGGCCGAGGACCTTTGCAATCTGACTTCTAGTGCCAATTaGTTCCATCATCACAGCTTG +
Preference number: 5 (lower is better)
Translates to: DCLHQLCKRSLAEDLCNLTSSAN*FHHHSL
Trigger: CAAGCTGTGATGATGGAACAAATTGGCACTAGAAGT...CAGATTGCAAAGGTCCTCGGCCAGGGATCTCTTGCACAGCTGATGTAGACAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GTGACAGTGACCCACAGGGTGAAATGTCCTTCTAGCTTGAGAGCAAACCTTTTCTGGATTCCTGCAACCTaGCAGCTCCAGACAGCTTAT +
Preference number: 5 (lower is better)
Translates to: VTVTHRVKCPSSLRANLFWIPAT*QLQTAY
Trigger: ATAAGCTGTCTGGAGCTGCAAGGTTGCAGGAATCCA...GAAAAGGTTTGCTCTCAAGCTAGAAGGACATTTCACCCTGTGGGTCACTGTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGTAGGGCTGGTGGCAAAATCAGGAAGGGACACCACTTTCTCAATTTGGGCCACAAATGTCCTTCTAGCTaGAGAGCAAACCTTTTCAGG +
Preference number: 5 (lower is better)
Translates to: GRAGGKIRKGHHFLNLGHKCPSS*RANLFR
Trigger: CCTGAAAAGGTTTGCTCTCAAGCTAGAAGGACATTT...GTGGCCCAAATTGAGAAAGTGGTGTCCCTTCCTGATTTTGCCACCAGCCCTACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS TCA 90 bp AGCAGGCAGGCAATCAGGTCACTGATAAACTCCACGTCATCTCTGTaGAGAGCGGCTTCTAACTCCTGTTTGAACTGTATCCAGGATAAC +
Preference number: 5 (lower is better)
Translates to: SRQAIRSLINSTSSL*RAASNSCLNCIQDN
Trigger: GTTATCCTGGATACAGTTCAAACAGGAGTTAGAAGCCGCTCTTCACAGAGATGACGTGGAGTTTATCAGTGACCTGATTGCCTGCCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497534.1
CDS-3UTR CAA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTGAGCCACCAAGTACCTaGGCCTGGCCCTTGGGACCC +
Preference number: 5 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFEPPST*AWPLGP
Trigger: GGGTCCCAAGGGCCAGGCCAAGGTACTTGGTGGCTC...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GTTGGGGTTCTTACACTACTCAACTGTCCTTACCTTGTGACTATAGGATTAGGCGATGCAACTCTGCCTTaGTGCGCTGTGGACGTTTTC +
Preference number: 5 (lower is better)
Translates to: VGVLTLLNCPYLVTIGLGDATLP*CAVDVF
Trigger: GAAAACGTCCACAGCGCACAAAGGCAGAGTTGCATC...GCCTAATCCTATAGTCACAAGGTAAGGACAGTTGAGTAGTGTAAGAACCCCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp AAGACCAGTGAAAGCTCAGGACACTCCCTGGACAATGGACGAAGCACTAGTACCACATGGGTCCTAACTTaGGTGACCTTTCAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: KTSESSGHSLDNGRSTSTTWVLT*VTFQLK
Trigger: TTTTAGCTGAAAGGTCACCAAAGTTAGGACCCATGT...GGTACTAGTGCTTCGTCCATTGTCCAGGGAGTGTCCTGAGCTTTCACTGGTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTAGAAGATACGAACTGTaGATGAGCAGCTCGTGTGTA +
Preference number: 5 (lower is better)
Translates to: GPLQSVCQSSKECPFRARRRYEL*MSSSCV
Trigger: TACACACGAGCTGCTCATCAACAGTTCGTATCTTCT...ACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp ATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTAGCTGCTCAACCTTGGCCTGGCCCTaGGGACCCATGTCTTGTCTG +
Preference number: 5 (lower is better)
Translates to: INTKSSPFPKYIPEFSCSTLAWP*GPMSCL
Trigger: CAGACAAGACATGGGTCCCAAGGGCCAGGCCAAGGT...TGAGCAGCTAAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CTGACAGGGAGGTCTGTGATGAGGACGATTCATCTTCTAATACGTGAAACACTCAGGTCTAAAAATTCTTaGGGACTCTCTGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: LTGRSVMRTIHLLIRETLRSKNS*GLSGLS
Trigger: GGAGAGGCCAGAGAGTCCCAAAGAATTTTTAGACCT...GAGTGTTTCACGTATTAGAAGATGAATCGTCCTCATCACAGACCTCCCTGTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GGACCTTTGCAATCTGTGTGTCAGTCATCTAAGGAGTGTCCTTTTAGGGCCCGTGTAGCTGCGTTATGGTaGTCCAGGTCTAAAAATTCT +
Preference number: 5 (lower is better)
Translates to: GPLQSVCQSSKECPFRARVAALW*SRSKNS
Trigger: AGAATTTTTAGACCTGGACAACCATAACGCAGCTAC...ACGGGCCCTAAAAGGACACTCCTTAGATGACTGACACACAGATTGCAAAGGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTCTGCTGTGGGGGTCTTaGGGAACGAGGCCTGCGACT +
Preference number: 5 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFLLWGS*GTRPAT
Trigger: AGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAG...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS CCA 90 bp ATGAGGCAGGAGAATCGCTTGAACCCTGATGGTCTGTACATTTCCTaGAAAGGTCCTCTTATTCCACTTCTAGTGCCAATTTGTTCCATC +
Preference number: 5 (lower is better)
Translates to: MRQENRLNPDGLYIS*KGPLIPLLVPICSI
Trigger: GATGGAACAAATTGGCACTAGAAGTGGAATAAGAGGACCTTTCCAGGAAATGTACAGACCATCAGGGTTCAAGCGATTCTCCTGCCTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.4
CDS-3UTR CAA 90 bp CCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGTGTGCAGCTTTCCATaGCTTGGGGCTCATTTCCTC +
Preference number: 5 (lower is better)
Translates to: PSSKTINTKSSPFPKYIPVCSFP*LGAHFL
Trigger: GAGGAAATGAGCCCCAAGCAATGGAAAGCTGCACAC...AGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp ATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATTCTTGAGTTCTTGCTTGACGGGTTaGATGGACAGGTGGTCAGAC +
Preference number: 5 (lower is better)
Translates to: IPEFSCSSKFKSTTPFLSSCLTG*MDRWSD
Trigger: GTCTGACCACCTGTCCATCAAACCCGTCAAGCAAGA...ACTCAAGAATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp CCAAATATATACCTGAGTTTAGCTGCTCATCAAAGTTTAAAAGCACCACTCCATGTCATTCTCAGGCTCTaGTGCTTCACTGTTCTCCGG +
Preference number: 5 (lower is better)
Translates to: PNIYLSLAAHQSLKAPLHVILRL*CFTVLR
Trigger: CCGGAGAACAGTGAAGCACAAGAGCCTGAGAATGAC...ATGGAGTGGTGCTTTTAAACTTTGATGAGCAGCTAAACTCAGGTATATATTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS-3UTR CAA 90 bp GACCCAGCTCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCACCAGGTTCAGCATTaGCGTACGGATATGAACTTC +
Preference number: 5 (lower is better)
Translates to: DPAPKPLILRVVPSPNIYHQVQH*RTDMNF
Trigger: GAAGTTCATATCCGTACGCAAATGCTGAACCTGGTG...GTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGAGCTGGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS CCA 90 bp TCTGTGTCTCCATCTTCTCCAGGAAAATGTTTCATCATTGCCCGATaGAAACACCTCTCTAAATTATCAGACATCTTGGTATACTCACTA +
Preference number: 5 (lower is better)
Translates to: SVSPSSPGKCFIIAR*KHLSKLSDILVYSL
Trigger: TAGTGAGTATACCAAGATGTCTGATAATTTAGAGAGGTGTTTCCATCGGGCAATGATGAAACATTTTCCTGGAGAAGATGGAGACACAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS-3UTR CAA 90 bp TCCAAAACCATTAATACTAAGAGTAGTCCCTTCCCCAAATATATACCTGAGTTTTTTACAAATTCCTCCTaGGTACAGTATAAACCTCCA +
Preference number: 5 (lower is better)
Translates to: SKTINTKSSPFPKYIPEFFTNSS*VQYKPP
Trigger: TGGAGGTTTATACTGTACCAAGGAGGAATTTGTAAA...AAACTCAGGTATATATTTGGGGAAGGGACTACTCTTAGTATTAATGGTTTTGGA
36% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS TCA 72 bp CCCACCTCCCGCGGGGGCTGTGTGGAGCTGCTGCTCTaGTCGTCCCCAGAAGAGGGCGCTCGGCGTGTGGGG +
Preference number: 6 (lower is better)
Translates to: PTSRGGCVELLL*SSPEEGARRVG
Trigger: CCCCACACGCCGAGCGCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCACACAGCCCCCGCGGGAGGTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GGCAGGCGGAACGCGGTGCGAAAGAGCGAGCAGAAGTaGGCGATGGCCGGGACCTCCCACCAGGAGCGGAGC +
Preference number: 6 (lower is better)
Translates to: GRRNAVRKSEQK*AMAGTSHQERS
Trigger: GCTCCGCTCCTGGTGGGAGGTCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCCGCCTGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS GCA 72 bp AAGTGCCCACCTCCCGCGGGGGCTGTGTGGAGCTGCTaGTCTGATCGTCCCCAGAAGAGGGCGCTCGGCGTG +
Preference number: 6 (lower is better)
Translates to: KCPPPAGAVWSC*SDRPQKRALGV
Trigger: CACGCCGAGCGCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCACACAGCCCCCGCGGGAGGTGGGCACTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp TGGAAGTGCCCACCTCCCGCGGGGGCTGTGTGGAGCTaGTGCTCTGATCGTCCCCAGAAGAGGGCGCTCGGC +
Preference number: 6 (lower is better)
Translates to: WKCPPPAGAVWS*CSDRPQKRALG
Trigger: GCCGAGCGCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCACACAGCCCCCGCGGGAGGTGGGCACTTCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GGAACGCGGTGCGAAAGAGCGAGCAGAAGTGCGCGATaGCCGGGACCTCCCACCAGGAGCGGAGCTCGCCCA +
Preference number: 6 (lower is better)
Translates to: GTRCERASRSAR*PGPPTRSGARP
Trigger: TGGGCGAGCTCCGCTCCTGGTGGGAGGTCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS CCA 72 bp GGCCATTGGAAGTGCCCACCTCCCGCGGGGGCTGTGTaGAGCTGCTGCTCTGATCGTCCCCAGAAGAGGGCG +
Preference number: 6 (lower is better)
Translates to: GHWKCPPPAGAV*SCCSDRPQKRA
Trigger: CGCCCTCTTCTGGGGACGATCAGAGCAGCAGCTCCACACAGCCCCCGCGGGAGGTGGGCACTTCCAATGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp CACCGTGGAGAGGTCTCTCACGCACCCTTGGGCGGCTaGGCCGGGGTAGCTGCTATCCGAGGGCCAGGGATT +
Preference number: 6 (lower is better)
Translates to: HRGEVSHAPLGG*AGVAAIRGPGI
Trigger: AATCCCTGGCCCTCGGATAGCAGCTACCCCGGCCCAGCCGCCCAAGGGTGCGTGAGAGACCTCTCCACGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp CTCCGTTCTCGGATAGAGCGCCCCTGTCTGCCACCGTaGAGAGGTCTCTCACGCACCCTTGGGCGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LRSRIERPCLPP*RGLSRTLGRLG
Trigger: GCCCAGCCGCCCAAGGGTGCGTGAGAGACCTCTCCACGGTGGCAGACAGGGGCGCTCTATCCGAGAACGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GAAAGGCTGACGCTGCTGCACAGGCTCCCCGGGGTGTaGCTCCGGGACTCCAGAGGAGCCATACAAGGTGGC +
Preference number: 6 (lower is better)
Translates to: ERLTLLHRLPGV*LRDSRGAIQGG
Trigger: GCCACCTTGTATGGCTCCTCTGGAGTCCCGGAGCCACACCCCGGGGAGCCTGTGCAGCAGCGTCAGCCTTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GGCTCACAGTGCCTCCCGTCAAACCGGGGTCTGTGCTaGGCGGTGTCGCTGCGTTCTGTCCCGTGCATGGCA +
Preference number: 6 (lower is better)
Translates to: GSQCLPSNRGLC*AVSLRSVPCMA
Trigger: TGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp ACTCCTCGATCTCGAAGTCGGGCAGGCGGAACGCGGTaGGAAAGAGCGAGCAGAAGTGCGCGATGGCCGGGA +
Preference number: 6 (lower is better)
Translates to: TPRSRSRAGGTR*ERASRSARWPG
Trigger: TCCCGGCCATCGCGCACTTCTGCTCGCTCTTTCGCACCGCGTTCCGCCTGCCCGACTTCGAGATCGAGGAGT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS GCA 72 bp CTCTCACGCACCCTTGGGCGGCTGGGCCGGGGTAGCTaGTATCCGAGGGCCAGGGATTCTTGCCCTTCATTG +
Preference number: 6 (lower is better)
Translates to: LSRTLGRLGRGS*YPRARDSCPSL
Trigger: CAATGAAGGGCAAGAATCCCTGGCCCTCGGATAGCAGCTACCCCGGCCCAGCCGCCCAAGGGTGCGTGAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp ACTGGCTCACAGTGCCTCCCGTCAAACCGGGGTCTGTaGTGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATG +
Preference number: 6 (lower is better)
Translates to: TGSQCLPSNRGL*WAVSLRSVPCM
Trigger: CATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GGCCAGGCATATACAGCGGGGGAAACTGGCTCACAGTaGCTCCCGTCAAACCGGGGTCTGTGCTGGGCGGTG +
Preference number: 6 (lower is better)
Translates to: GQAYTAGETGSQ*LPSNRGLCWAV
Trigger: CACCGCCCAGCACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTCCCCCGCTGTATATGCCTGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp CTGGACCCTTCTGGGTCCCTGGAGCGGGTCCAAACATaGCTCCCACCACTTCGCCCAGCCCGACTCCGTCTT +
Preference number: 6 (lower is better)
Translates to: LDPSGSLERVQT*LPPLRPARLRL
Trigger: AAGACGGAGTCGGGCTGGGCGAAGTGGTGGGAGCCATGTTTGGACCCGCTCCAGGGACCCAGAAGGGTCCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GAGGTGGGAGGGCAGCCACAGGGGAAGAGTAAGCCCTaGGCTGAAAGTGACTGGCCGGCCGCTGAGGGGTAT +
Preference number: 6 (lower is better)
Translates to: EVGGQPQGKSKP*AESDWPAAEGY
Trigger: ATACCCCTCAGCGGCCGGCCAGTCACTTTCAGCCCAGGGCTTACTCTTCCCCTGTGGCTGCCCTCCCACCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GACGCGGGAGGAGAGCTGCTGCATCGCAATCATCTCTaGGCTGTCCATCATGGAGTCCCCTCCCTGCACCCC +
Preference number: 6 (lower is better)
Translates to: DAGGELLHRNHL*AVHHGVPSLHP
Trigger: GGGGTGCAGGGAGGGGACTCCATGATGGACAGCCCAGAGATGATTGCGATGCAGCAGCTCTCCTCCCGCGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp GGGTCCTGGCCCCAGGTGGGGCTTCTCATCTGGGCCCAAGGGTCCTaGGTTCGTAGCACCATGGTTCCCATTCCAGACGGCAGAGTGTAC +
Preference number: 6 (lower is better)
Translates to: GSWPQVGLLIWAQGS*VRSTMVPIPDGRVY
Trigger: GTACACTCTGCCGTCTGGAATGGGAACCATGGTGCTACGAACCAAGGACCCTTGGGCCCAGATGAGAAGCCCCACCTGGGGCCAGGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CAGGGTTGCCCAGGGCAGGCTTGGGGGCTGACACAGTaGCTGACATTGGGTGAGCTACCTGCGGAAAAGGGC +
Preference number: 6 (lower is better)
Translates to: QGCPGQAWGLTQ*LTLGELPAEKG
Trigger: GCCCTTTTCCGCAGGTAGCTCACCCAATGTCAGTCACTGTGTCAGCCCCCAAGCCTGCCCTGGGCAACCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GGTCTGTGCTGGGCGGTGTCGCTGCGTTCTGTCCCGTaGATGGCATGGTTTCCTGCAACGTTCTGCCTCTGG +
Preference number: 6 (lower is better)
Translates to: GLCWAVSLRSVP*MAWFPATFCLW
Trigger: CCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp TCCCGTCAAACCGGGGTCTGTGCTGGGCGGTGTCGCTaGGTTCTGTCCCGTGCATGGCATGGTTTCCTGCAA +
Preference number: 6 (lower is better)
Translates to: SRQTGVCAGRCR*VLSRAWHGFLQ
Trigger: TTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACAGACCCCGGTTTGACGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp TGCTCTGATCGTCCCCAGAAGAGGGCGCTCGGCGTGTaGGGGGCAACGACTTTCCTCCATTCTCCATGGGCT +
Preference number: 6 (lower is better)
Translates to: CSDRPQKRALGV*GATTFLHSPWA
Trigger: AGCCCATGGAGAATGGAGGAAAGTCGTTGCCCCCCACACGCCGAGCGCCCTCTTCTGGGGACGATCAGAGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp TGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATGGCATaGTTTCCTGCAACGTTCTGCCTCTGGGGCAGAGCA +
Preference number: 6 (lower is better)
Translates to: WAVSLRSVPCMA*FPATFCLWGRA
Trigger: TGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp TGTGCTGGGCGGTGTCGCTGCGTTCTGTCCCGTGCATaGCATGGTTTCCTGCAACGTTCTGCCTCTGGGGCA +
Preference number: 6 (lower is better)
Translates to: CAGRCRCVLSRA*HGFLQRSASGA
Trigger: TGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGAACGCAGCGACACCGCCCAGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GAAAGTGACCCAGGCCTTCTTCCTGGCAGCGATAGATaGGACCCTCCTGAGAGAGGCCGTTGGGCTGGGTGG +
Preference number: 6 (lower is better)
Translates to: ESDPGLLPGSDR*DPPERGRWAGW
Trigger: CCACCCAGCCCAACGGCCTCTCTCAGGAGGGTCCCATCTATCGCTGCCAGGAAGAAGGCCTGGGTCACTTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp CCCCAGGTGGGGCTTCTCATCTGGGCCCAAGGGTCCTaGGTTCGTAGCACCATGGTTCCCATTCCAGACGGC +
Preference number: 6 (lower is better)
Translates to: PQVGLLIWAQGS*VRSTMVPIPDG
Trigger: GCCGTCTGGAATGGGAACCATGGTGCTACGAACCAAGGACCCTTGGGCCCAGATGAGAAGCCCCACCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp AGCCTTGCAGACTGGCCATGGCATTCTTATCTGAGAAGAGGGACCTaGGTGGGGGAGGCTGACTGGCTGGGGGTCCGCTTGGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: SLADWPWHSYLRRGT*VGEADWLGVRLGFP
Trigger: AGGGAAGCCCAAGCGGACCCCCAGCCAGTCAGCCTCCCCCACCAAGGTCCCTCTTCTCAGATAAGAATGCCATGGCCAGTCTGCAAGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp TATGAGGCGGCACCTCCTCCTGTGATGTTGCTGCTGTGGGGGTCTTaGGGAACGAGGCCTGCGACTGGACCGGGTGCATCTGCATTCCTG +
Preference number: 6 (lower is better)
Translates to: YEAAPPPVMLLLWGS*GTRPATGPGASAFL
Trigger: CAGGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATCACAGGAGGAGGTGCCGCCTCATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp GGTGCCTGGCTGGGTGTCCCACCACAATGCAGGGGATaGGAAAAACCTCGGCCATTGGAAGTGCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: GAWLGVPPQCRG*EKPRPLEVPTS
Trigger: GGAGGTGGGCACTTCCAATGGCCGAGGTTTTTCTCATCCCCTGCATTGTGGTGGGACACCCAGCCAGGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp GCAGGCTTGGGGGCTGACACAGTGACTGACATTGGGTaGGCTACCTGCGGAAAAGGGCCAGGTAAACGGGGG +
Preference number: 6 (lower is better)
Translates to: AGLGADTVTDIG*ATCGKGPGKRG
Trigger: CCCCCGTTTACCTGGCCCTTTTCCGCAGGTAGCTCACCCAATGTCAGTCACTGTGTCAGCCCCCAAGCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GCACTGGAGGTGGCTGTAACCGATGTCCGGCAGACTTaGAGGGCGGTCGCATGTACCCTGAGGAAGGAACTC +
Preference number: 6 (lower is better)
Translates to: ALEVAVTDVRQT*RAVACTLRKEL
Trigger: GAGTTCCTTCCTCAGGGTACATGCGACCGCCCTGCAAGTCTGCCGGACATCGGTTACAGCCACCTCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp CTTCGCTCGATCCACAGGACGGCTGGTCGACAGACATaGACCTCTCCAGACCACGCGGACACTGCACATACC +
Preference number: 6 (lower is better)
Translates to: LRSIHRTAGRQT*TSPDHADTAHT
Trigger: GGTATGTGCAGTGTCCGCGTGGTCTGGAGAGGTGCATGTCTGTCGACCAGCCGTCCTGTGGATCGAGCGAAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342247.10
CDS GCA 72 bp GCCAGGCAACGGCTCTTGGTCATTCTCAGGCTCTTGTaGTTCACTGTTCTCCGGTGCCCTCCCAGGGTTGCC +
Preference number: 6 (lower is better)
Translates to: ARQRLLVILRLL*FTVLRCPPRVA
Trigger: GGCAACCCTGGGAGGGCACCGGAGAACAGTGAAGCACAAGAGCCTGAGAATGACCAAGAGCCGTTGCCTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400585.7
CDS CCA 72 bp TGCAGGATCTCCACCCGTGTGCGAAGAGGCAGGTCCTaGAAACTGGCTTCCCTCAGAGGGTTGGGCTTCCCT +
Preference number: 6 (lower is better)
Translates to: CRISTRVRRGRS*KLASLRGLGFP
Trigger: AGGGAAGCCCAACCCTCTGAGGGAAGCCAGTTTCCAGGACCTGCCTCTTCGCACACGGGTGGAGATCCTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000497534.1
ENST00000612582.1
CDS CCA 72 bp CCCAGGTGGGGCTTCTCATCTGGGCCCAAGGGTCCTTaGTTCGTAGCACCATGGTTCCCATTCCAGACGGCA +
Preference number: 6 (lower is better)
Translates to: PRWGFSSGPKGP*FVAPWFPFQTA
Trigger: TGCCGTCTGGAATGGGAACCATGGTGCTACGAACCAAGGACCCTTGGGCCCAGATGAGAAGCCCCACCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GGGTACTCTAGGCCAGGCATATACAGCGGGGGAAACTaGCTCACAGTGCCTCCCGTCAAACCGGGGTCTGTG +
Preference number: 6 (lower is better)
Translates to: GYSRPGIYSGGN*LTVPPVKPGSV
Trigger: CACAGACCCCGGTTTGACGGGAGGCACTGTGAGCCAGTTTCCCCCGCTGTATATGCCTGGCCTAGAGTACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GGCACTGGAGGTGGCTGTAACCGATGTCCGGCAGACTaGCAGGGCGGTCGCATGTACCCTGAGGAAGGAACT +
Preference number: 6 (lower is better)
Translates to: GTGGGCNRCPAD*QGGRMYPEEGT
Trigger: AGTTCCTTCCTCAGGGTACATGCGACCGCCCTGCAAGTCTGCCGGACATCGGTTACAGCCACCTCCAGTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GACTGGCCATGGCATTCTTATCTGAGAAGAGGGACCTaGGTGGGGGAGGCTGACTGGCTGGGGGTCCGCTTG +
Preference number: 6 (lower is better)
Translates to: DWPWHSYLRRGT*VGEADWLGVRL
Trigger: CAAGCGGACCCCCAGCCAGTCAGCCTCCCCCACCAAGGTCCCTCTTCTCAGATAAGAATGCCATGGCCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GATGTTGCTGCTGTGGGGGTCTTTGGGAACGAGGCCTaGGACTGGACCGGGTGCATCTGCATTCCTGATGGT +
Preference number: 6 (lower is better)
Translates to: DVAAVGVFGNEA*DWTGCICIPDG
Trigger: ACCATCAGGAATGCAGATGCACCCGGTCCAGTCGCAGGCCTCGTTCCCAAAGACCCCCACAGCAGCAACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp CTGTGGCGGTGGGTGGTAGGAATACCTCATTCCTTGTaGGGGGCGATACCGGGGAAAGCCTCCAGAATGTGG +
Preference number: 6 (lower is better)
Translates to: LWRWVVGIPHSL*GAIPGKASRMW
Trigger: CCACATTCTGGAGGCTTTCCCCGGTATCGCCCCCCACAAGGAATGAGGTATTCCTACCACCCACCGCCACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CGGGACTCCAGAGGAGCCATACAAGGTGGCAGGATCTaGTCCTCGCAGAGGGCCAAATGTTCCTGGTACTGC +
Preference number: 6 (lower is better)
Translates to: RDSRGAIQGGRI*SSQRAKCSWYC
Trigger: GCAGTACCAGGAACATTTGGCCCTCTGCGAGGATCAGATCCTGCCACCTTGTATGGCTCCTCTGGAGTCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CTCCCATCACAGGGCCCACACCCTGCAGGCCTGGACTaGTGTGGTAATGGGCAGCTGAATTCGGGTACTCTA +
Preference number: 6 (lower is better)
Translates to: LPSQGPHPAGLD*CGNGQLNSGTL
Trigger: TAGAGTACCCGAATTCAGCTGCCCATTACCACATCAGTCCAGGCCTGCAGGGTGTGGGCCCTGTGATGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GGCCGGGGTAGCTGCTATCCGAGGGCCAGGGATTCTTaGCCTTCATTGCTTTACAGTTGTCCGCAGATTCGG +
Preference number: 6 (lower is better)
Translates to: GRGSCYPRARDS*PSLLYSCPQIR
Trigger: CCGAATCTGCGGACAACTGTAAAGCAATGAAGGGCAAGAATCCCTGGCCCTCGGATAGCAGCTACCCCGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp TCTGTCCCGTGCATGGCATGGTTTCCTGCAACGTTCTaGCTCTGGGGCAGAGCAGCTTTTCGGAACCACTGC +
Preference number: 6 (lower is better)
Translates to: SVPCMAWFPATF*LWGRAAFRNHC
Trigger: GCAGTGGTTCCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp AAGGCCAGGCAACGGCTCTTGGTCATTCTCAGGCTCTaGTGCTTCACTGTTCTCCGGTGCCCTCCCAGGGTT +
Preference number: 6 (lower is better)
Translates to: KARQRLLVILRL*CFTVLRCPPRV
Trigger: AACCCTGGGAGGGCACCGGAGAACAGTGAAGCACAAGAGCCTGAGAATGACCAAGAGCCGTTGCCTGGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400585.7
CDS CAA 90 bp ATCCTGGCTGGAACTGAGCTGGAGCATACATGCTTCCATCCTGACTaGGGCCACTTATCTGCCCAAGCTGCAAGGATCCAGGGTGTGGGC +
Preference number: 6 (lower is better)
Translates to: ILAGTELEHTCFHPD*GHLSAQAARIQGVG
Trigger: GCCCACACCCTGGATCCTTGCAGCTTGGGCAGATAAGTGGCCCAAGTCAGGATGGAAGCATGTATGCTCCAGCTCAGTTCCAGCCAGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CAGAGGCGGAGGAGTTCCATAGAGATACTCGCTGGCTaGCAACGAGCTCTGCCGCTTGGTAGCTGCGTTATG +
Preference number: 6 (lower is better)
Translates to: QRRRSSIEILAG*QRALPLGSCVM
Trigger: CATAACGCAGCTACCAAGCGGCAGAGCTCGTTGTCAGCCAGCGAGTATCTCTATGGAACTCCTCCGCCTCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp GGACAGGTGGTCAGACATCCACCTAGGATGCAACTCTaGCTTTGTGCGCTGTGGACGTTTTCCCTTCTGGGC +
Preference number: 6 (lower is better)
Translates to: GQVVRHPPRMQL*LCALWTFSLLG
Trigger: GCCCAGAAGGGAAAACGTCCACAGCGCACAAAGGCAGAGTTGCATCCTAGGTGGATGTCTGACCACCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp CCGTGCATGGCATGGTTTCCTGCAACGTTCTGCCTCTaGGGCAGAGCAGCTTTTCGGAACCACTGCTACCAA +
Preference number: 6 (lower is better)
Translates to: PCMAWFPATFCL*GRAAFRNHCYQ
Trigger: TTGGTAGCAGTGGTTCCGAAAAGCTGCTCTGCCCCAGAGGCAGAACGTTGCAGGAAACCATGCCATGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp CAGACCACGCGGACACTGCACATACCTTCCACTGCCTaGACCTTCTCCTCCAACTCGCGTTTCCTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: QTTRTLHIPSTA*TFSSNSRFLSS
Trigger: GGAAGAGAGGAAACGCGAGTTGGAGGAGAAGGTCAAGGCAGTGGAAGGTATGTGCAGTGTCCGCGTGGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342247.10
CDS CAA 90 bp GCACCTCTCCAGACCACGCGGACACTGCACATACCTTCCACTGCCTaGACCTTCTCCTCCAACTCGCGTTTCCTCTCTTCCTTTAGCATC +
Preference number: 6 (lower is better)
Translates to: APLQTTRTLHIPSTA*TFSSNSRFLSSFSI
Trigger: GATGCTAAAGGAAGAGAGGAAACGCGAGTTGGAGGAGAAGGTCAAGGCAGTGGAAGGTATGTGCAGTGTCCGCGTGGTCTGGAGAGGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342247.10
CDS TCA 72 bp GTTCTCGAAGGGAGGTCCTCTCGCGAAAACTCTCGGTaGCCTGTCTCCATTCCTCTTCTGTCTGGCACAGGA +
Preference number: 6 (lower is better)
Translates to: VLEGRSSRENSR*PVSIPLLSGTG
Trigger: TCCTGTGCCAGACAGAAGAGGAATGGAGACAGGTCACCGAGAGTTTTCGCGAGAGGACCTCCCTTCGAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CGATCATGTTGCAGATCTCAGGCAGGAAGTCCTCACTaGGGAGCTTGTAGAGCTGCCGTTCTCGAAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RSCCRSQAGSPH*GACRAAVLEGR
Trigger: CCTCCCTTCGAGAACGGCAGCTCTACAAGCTCCTCAGTGAGGACTTCCTGCCTGAGATCTGCAACATGATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CAGGGCGGTCGCATGTACCCTGAGGAAGGAACTCCATaGGGTAGGAAGCCTGATTGTTCAGTCCACTGGTTG +
Preference number: 6 (lower is better)
Translates to: QGGRMYPEEGTP*GRKPDCSVHWL
Trigger: CAACCAGTGGACTGAACAATCAGGCTTCCTACCTCATGGAGTTCCTTCCTCAGGGTACATGCGACCGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp TCATCTGGGCCCAAGGGTCCTTGGTTCGTAGCACCATaGTTCCCATTCCAGACGGCAGAGTGTACTCGATTC +
Preference number: 6 (lower is better)
Translates to: SSGPKGPWFVAP*FPFQTAECTRF
Trigger: GAATCGAGTACACTCTGCCGTCTGGAATGGGAACCATGGTGCTACGAACCAAGGACCCTTGGGCCCAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp CCCTTCATTGCTTTACAGTTGTCCGCAGATTCGGAGGAGCTGCTTTaGAGCTCCGGGCCCACTGTTTCCCTTTCTTGTGGTGAGCTCTGC +
Preference number: 6 (lower is better)
Translates to: PFIALQLSADSEELL*SSGPTVSLSCGELC
Trigger: GCAGAGCTCACCACAAGAAAGGGAAACAGTGGGCCCGGAGCTCAAAAGCAGCTCCTCCGAATCTGCGGACAACTGTAAAGCAATGAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CTTTACAGTTGTCCGCAGATTCGGAGGAGCTGCTTTTaGGCTCCGGGCCCACTGTTTCCCTTTCTTGTGGTG +
Preference number: 6 (lower is better)
Translates to: LYSCPQIRRSCF*APGPLFPFLVV
Trigger: CACCACAAGAAAGGGAAACAGTGGGCCCGGAGCTCAAAAGCAGCTCCTCCGAATCTGCGGACAACTGTAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp ACCTTGGCCTGGCCCTTGGGACCCATGTCTTGTCTGTaGCTCGGATGCCAAGGAATTTTCTTCCTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: TLAWPLGPMSCL*LGCQGIFFLLF
Trigger: GAAAAGCAGGAAGAAAATTCCTTGGCATCCGAGCCACAGACAAGACATGGGTCCCAAGGGCCAGGCCAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GAACTGAGCTGGAGCATACATGCTTCCATCCTGACTTaGGCCACTTATCTGCCCAAGCTGCAAGGATCCAGG +
Preference number: 6 (lower is better)
Translates to: ELSWSIHASILT*ATYLPKLQGSR
Trigger: CCTGGATCCTTGCAGCTTGGGCAGATAAGTGGCCCAAGTCAGGATGGAAGCATGTATGCTCCAGCTCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp CTTCTCTTCCTCTGGACCAGGATTCTGCCCGTCATTTaGGACTTTAGCAGCCACTGCATCCATACGGGTTGG +
Preference number: 6 (lower is better)
Translates to: LLFLWTRILPVI*DFSSHCIHTGW
Trigger: CCAACCCGTATGGATGCAGTGGCTGCTAAAGTCCCAAATGACGGGCAGAATCCTGGTCCAGAGGAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GGAACTGAGCTGGAGCATACATGCTTCCATCCTGACTaGGGCCACTTATCTGCCCAAGCTGCAAGGATCCAG +
Preference number: 6 (lower is better)
Translates to: GTELEHTCFHPD*GHLSAQAARIQ
Trigger: CTGGATCCTTGCAGCTTGGGCAGATAAGTGGCCCAAGTCAGGATGGAAGCATGTATGCTCCAGCTCAGTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GCTTTACAGTTGTCCGCAGATTCGGAGGAGCTGCTTTaGAGCTCCGGGCCCACTGTTTCCCTTTCTTGTGGT +
Preference number: 6 (lower is better)
Translates to: ALQLSADSEELL*SSGPTVSLSCG
Trigger: ACCACAAGAAAGGGAAACAGTGGGCCCGGAGCTCAAAAGCAGCTCCTCCGAATCTGCGGACAACTGTAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GAGGGCCAGGGATTCTTGCCCTTCATTGCTTTACAGTaGTCCGCAGATTCGGAGGAGCTGCTTTTGAGCTCC +
Preference number: 6 (lower is better)
Translates to: EGQGFLPFIALQ*SADSEELLLSS
Trigger: GGAGCTCAAAAGCAGCTCCTCCGAATCTGCGGACAACTGTAAAGCAATGAAGGGCAAGAATCCCTGGCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp CTTGTACGATCGATACATATGGCTGGGAGGAATTTCTaGGCTTTCAGGAAAGTCTGGTGGCCGGGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: LVRSIHMAGRNF*AFRKVWWPGWS
Trigger: GCTCCAGCCCGGCCACCAGACTTTCCTGAAAGCTCAGAAATTCCTCCCAGCCATATGTATCGATCGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GGAGTCTCCTCTTGCTTGACGGGTTTGATGGACAGGTaGTCAGACATCCACCTAGGATGCAACTCTGCCTTT +
Preference number: 6 (lower is better)
Translates to: GVSSCLTGLMDR*SDIHLGCNSAF
Trigger: AAAGGCAGAGTTGCATCCTAGGTGGATGTCTGACCACCTGTCCATCAAACCCGTCAAGCAAGAGGAGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GGGATGGAGAGGTCTCTGCCAGTCAGAAAAGCTCTGTaGACAGGCATAGTAAGGAGTTCGCTGATAGTGGTG +
Preference number: 6 (lower is better)
Translates to: GMERSLPVRKAL*TGIVRSSLIVV
Trigger: CACCACTATCAGCGAACTCCTTACTATGCCTGTCCACAGAGCTTTTCTGACTGGCAGAGACCTCTCCATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GTAGCTGTGGAATGTCTGAGGCGTGATATCTCTTCGTaGATAGCAGCCCTGAAGCAGGCAGGCAATCAGGTC +
Preference number: 6 (lower is better)
Translates to: VAVECLRRDISS*IAALKQAGNQV
Trigger: GACCTGATTGCCTGCCTGCTTCAGGGCTGCTATCAACGAAGAGATATCACGCCTCAGACATTCCACAGCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000497534.1
ENST00000612582.1
CDS CAA 90 bp TCGCTGGCTGACAACGAGCTCTGCCGCTTGGTAGCTGCGTTATGGTaGTCCAGGTCTAAAAATTCTTTGGGACTCTCTGGCCTCTCCATA +
Preference number: 6 (lower is better)
Translates to: SLADNELCRLVAALW*SRSKNSLGLSGLSI
Trigger: TATGGAGAGGCCAGAGAGTCCCAAAGAATTTTTAGACCTGGACAACCATAACGCAGCTACCAAGCGGCAGAGCTCGTTGTCAGCCAGCGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS GCA 72 bp TGGCCCTTGGGACCCATGTCTTGTCTGTGGCTCGGATaGCAAGGAATTTTCTTCCTGCTTTTCACTCAACAG +
Preference number: 6 (lower is better)
Translates to: WPLGPMSCLWLG*QGIFFLLFTQQ
Trigger: CTGTTGAGTGAAAAGCAGGAAGAAAATTCCTTGGCATCCGAGCCACAGACAAGACATGGGTCCCAAGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GACAACGAGCTCTGCCGCTTGGTAGCTGCGTTATGGTaGTCCAGGTCTAAAAATTCTTTGGGACTCTCTGGC +
Preference number: 6 (lower is better)
Translates to: DNELCRLVAALW*SRSKNSLGLSG
Trigger: GCCAGAGAGTCCCAAAGAATTTTTAGACCTGGACAACCATAACGCAGCTACCAAGCGGCAGAGCTCGTTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp GCAATCAGGTCACTGATAAACTCCACGTCATCTCTGTaGAGAGCGGCTTCTAACTCCTCGATCTCGAAGTCG +
Preference number: 6 (lower is better)
Translates to: AIRSLINSTSSL*RAASNSSISKS
Trigger: CGACTTCGAGATCGAGGAGTTAGAAGCCGCTCTTCACAGAGATGACGTGGAGTTTATCAGTGACCTGATTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000262608.13
ENST00000342247.10
CDS CCA 72 bp GCTGACAACGAGCTCTGCCGCTTGGTAGCTGCGTTATaGTTGTCCAGGTCTAAAAATTCTTTGGGACTCTCT +
Preference number: 6 (lower is better)
Translates to: ADNELCRLVAAL*LSRSKNSLGLS
Trigger: AGAGAGTCCCAAAGAATTTTTAGACCTGGACAACCATAACGCAGCTACCAAGCGGCAGAGCTCGTTGTCAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp TGCCGCTTGGTAGCTGCGTTATGGTTGTCCAGGTCTAAAAATTCTTaGGGACTCTCTGGCCTCTCCATAGATTCATCCAGCTTCTCTTCC +
Preference number: 6 (lower is better)
Translates to: CRLVAALWLSRSKNS*GLSGLSIDSSSFSS
Trigger: GGAAGAGAAGCTGGATGAATCTATGGAGAGGCCAGAGAGTCCCAAAGAATTTTTAGACCTGGACAACCATAACGCAGCTACCAAGCGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp TCCTCTTATTCCACTTCTAGTGCCAATTTGTTCCATCATCACAGCTaGAAAGTGACCCAGGCCTTCTTCCTGGCAGCGATAGATGGGACC +
Preference number: 6 (lower is better)
Translates to: SSYSTSSANLFHHHS*KVTQAFFLAAIDGT
Trigger: GGTCCCATCTATCGCTGCCAGGAAGAAGGCCTGGGTCACTTTCAAGCTGTGATGATGGAACAAATTGGCACTAGAAGTGGAATAAGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp TCCACTTCTAGTGCCAATTTGTTCCATCATCACAGCTaGAAAGTGACCCAGGCCTTCTTCCTGGCAGCGATA +
Preference number: 6 (lower is better)
Translates to: STSSANLFHHHS*KVTQAFFLAAI
Trigger: TATCGCTGCCAGGAAGAAGGCCTGGGTCACTTTCAAGCTGTGATGATGGAACAAATTGGCACTAGAAGTGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp CCATGGTTCCCATTCCAGACGGCAGAGTGTACTCGATTCAGGTACTaGTACGATCGATACATATGGCTGGGAGGAATTTCTGAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: PWFPFQTAECTRFRY*YDRYIWLGGISELS
Trigger: TGAAAGCTCAGAAATTCCTCCCAGCCATATGTATCGATCGTACAAGTACCTGAATCGAGTACACTCTGCCGTCTGGAATGGGAACCATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp TGCTCCTGCTCCTTCTTCTGCACTGCTAGAAGAATCTaGCGCTCTTCTTCCTCCTCTTTGCGCTTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: CSCSFFCTARRI*RSSSSSLRFCF
Trigger: AAAACAAAAGCGCAAAGAGGAGGAAGAAGAGCGTCAGATTCTTCTAGCAGTGCAGAAGAAGGAGCAGGAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp CCATTCCAGACGGCAGAGTGTACTCGATTCAGGTACTaGTACGATCGATACATATGGCTGGGAGGAATTTCT +
Preference number: 6 (lower is better)
Translates to: PFQTAECTRFRY*YDRYIWLGGIS
Trigger: AGAAATTCCTCCCAGCCATATGTATCGATCGTACAAGTACCTGAATCGAGTACACTCTGCCGTCTGGAATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp GTAGCTGCGTTATGGTTGTCCAGGTCTAAAAATTCTTaGGGACTCTCTGGCCTCTCCATAGATTCATCCAGC +
Preference number: 6 (lower is better)
Translates to: VAALWLSRSKNS*GLSGLSIDSSS
Trigger: GCTGGATGAATCTATGGAGAGGCCAGAGAGTCCCAAAGAATTTTTAGACCTGGACAACCATAACGCAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp CTGGAAAGGTCCTCTTATTCCACTTCTAGTGCCAATTaGTTCCATCATCACAGCTTGAAAGTGACCCAGGCC +
Preference number: 6 (lower is better)
Translates to: LERSSYSTSSAN*FHHHSLKVTQA
Trigger: GGCCTGGGTCACTTTCAAGCTGTGATGATGGAACAAATTGGCACTAGAAGTGGAATAAGAGGACCTTTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000355219.4
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp GCAATCAGGTCACTGATAAACTCCACGTCATCTCTGTaGAGAGCGGCTTCTAACTCCTCTTCATTTCACATG +
Preference number: 6 (lower is better)
Translates to: AIRSLINSTSSL*RAASNSSSFHM
Trigger: CATGTGAAATGAAGAGGAGTTAGAAGCCGCTCTTCACAGAGATGACGTGGAGTTTATCAGTGACCTGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000400585.7
CDS TCA 72 bp GCAATCAGGTCACTGATAAACTCCACGTCATCTCTGTaGAGAGCGGCTTCTAACTCCTGTTTGAACTGTATC +
Preference number: 6 (lower is better)
Translates to: AIRSLINSTSSL*RAASNSCLNCI
Trigger: GATACAGTTCAAACAGGAGTTAGAAGCCGCTCTTCACAGAGATGACGTGGAGTTTATCAGTGACCTGATTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497534.1
CDS CCA 72 bp CTCGATTCAGGTACTTGTACGATCGATACATATGGCTaGGAGGAATTTCTGAGCTTTCAGGAAAGTCTGGTG +
Preference number: 6 (lower is better)
Translates to: LDSGTCTIDTYG*EEFLSFQESLV
Trigger: CACCAGACTTTCCTGAAAGCTCAGAAATTCCTCCCAGCCATATGTATCGATCGTACAAGTACCTGAATCGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CCA 72 bp GGGTGCATCTGCATTCCTGATGGTCTGTACATTTCCTaGAAAGGTCCTCTTATTCCACTTCTAGTGCCAATT +
Preference number: 6 (lower is better)
Translates to: GCICIPDGLYIS*KGPLIPLLVPI
Trigger: AATTGGCACTAGAAGTGGAATAAGAGGACCTTTCCAGGAAATGTACAGACCATCAGGAATGCAGATGCACCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp TTCCCTGCTCAAAGAGAGTTCTCCATTGGATTTTCCTaGCACCGGGTCCTCTTTGTACATTCGTGTTCCATA +
Preference number: 6 (lower is better)
Translates to: FPAQREFSIGFS*HRVLFVHSCSI
Trigger: TATGGAACACGAATGTACAAAGAGGACCCGGTGCAAGGAAAATCCAATGGAGAACTCTCTTTGAGCAGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp TCCTTCACTTTCCCTGCTCAAAGAGAGTTCTCCATTGGATTTTCCTaGCACCGGGTCCTCTTTGTACATTCGTGTTCCATAGAAATACCA +
Preference number: 6 (lower is better)
Translates to: SFTFPAQREFSIGFS*HRVLFVHSCSIEIP
Trigger: TGGTATTTCTATGGAACACGAATGTACAAAGAGGACCCGGTGCAAGGAAAATCCAATGGAGAACTCTCTTTGAGCAGGGAAAGTGAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp GCAATCAGGTCACTGATAAACTCCACGTCATCTCTGTaGAGAGCGGCTTCTAACTCCTTCTCAAGAGATAAA +
Preference number: 6 (lower is better)
Translates to: AIRSLINSTSSL*RAASNSFSRDK
Trigger: TTTATCTCTTGAGAAGGAGTTAGAAGCCGCTCTTCACAGAGATGACGTGGAGTTTATCAGTGACCTGATTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000612582.1
CDS CCA 72 bp GAGAATCGCTTGAACCCTGATGGTCTGTACATTTCCTaGAAAGGTCCTCTTATTCCACTTCTAGTGCCAATT +
Preference number: 6 (lower is better)
Translates to: ENRLNPDGLYIS*KGPLIPLLVPI
Trigger: AATTGGCACTAGAAGTGGAATAAGAGGACCTTTCCAGGAAATGTACAGACCATCAGGGTTCAAGCGATTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.4
CDS CCA 72 bp TGTACTCGATTCAGGTACTTGTACGATCGATACATATaGCTGGGAGGAATTTCTGAGCTTTCAGGAAAGTCT +
Preference number: 6 (lower is better)
Translates to: CTRFRYLYDRYI*LGGISELSGKS
Trigger: AGACTTTCCTGAAAGCTCAGAAATTCCTCCCAGCCATATGTATCGATCGTACAAGTACCTGAATCGAGTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 72 bp AGAGTGTCTCCACATGGCAGCAATGTTGACACAGGCTaGCTTACAGCTCTCAAACTGTGGTTATTAAGTTTA +
Preference number: 6 (lower is better)
Translates to: RVSPHGSNVDTG*LTALKLWLLSL
Trigger: TAAACTTAATAACCACAGTTTGAGAGCTGTAAGCAAGCCTGTGTCAACATTGCTGCCATGTGGAGACACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000355219.4
CDS TCA 72 bp CGTCATCTCTGTGAAGAGCGGCTTCTAACTCCTGTTTaGACTGTATCCAGGATAACCAAATGTTTGATAAGT +
Preference number: 6 (lower is better)
Translates to: RHLCEERLLTPV*TVSRITKCLIS
Trigger: ACTTATCAAACATTTGGTTATCCTGGATACAGTTCAAACAGGAGTTAGAAGCCGCTCTTCACAGAGATGACG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497534.1
CDS CCA 72 bp CCATCTTCTCCAGGAAAATGTTTCATCATTGCCCGATaGAAACACCTCTCTAAATTATCAGACATCTTGGTA +
Preference number: 6 (lower is better)
Translates to: PSSPGKCFIIAR*KHLSKLSDILV
Trigger: TACCAAGATGTCTGATAATTTAGAGAGGTGTTTCCATCGGGCAATGATGAAACATTTTCCTGGAGAAGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS CAA 90 bp ATTCTTCATCTGTGTCTCCATCTTCTCCAGGAAAATGTTTCATCATaGCCCGATGGAAACACCTCTCTAAATTATCAGACATCTTGGTAT +
Preference number: 6 (lower is better)
Translates to: ILHLCLHLLQENVSS*PDGNTSLNYQTSWY
Trigger: ATACCAAGATGTCTGATAATTTAGAGAGGTGTTTCCATCGGGCAATGATGAAACATTTTCCTGGAGAAGATGGAGACACAGATGAAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1
CDS TCA 72 bp ACTCACTACTTTCCCCATTATACTTTCGACAATTCCTaGACATGGTCTTCATGTCATTTACAAATTCCTCCT +
Preference number: 6 (lower is better)
Translates to: THYFPHYTFDNS*TWSSCHLQIPP
Trigger: AGGAGGAATTTGTAAATGACATGAAGACCATGTTCAGGAATTGTCGAAAGTATAATGGGGAAAGTAGTGAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262608.13
ENST00000342247.10
ENST00000400585.7
ENST00000612582.1