RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEBPZ (Homo sapiens)

Ensembl gene IDs: ENSG00000115816

Ensembl transcript IDs: ENST00000234170.10, ENST00000446769.1, ENST00000489306.1

Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp TCCGGATCTTCTACTGCCTCCTCGGGGCGCCAAGGCCGCTTGGCATaGAACTCCAAAGGCTCCTTGACTGCGGCCATGGCGGGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SGSSTASSGRQGRLA*NSKGSLTAAMAGKA
Trigger: TGCTTTGCCCGCCATGGCCGCAGTCAAGGAGCCTTTGGAGTTCCATGCCAAGCGGCCTTGGCGCCCCGAGGAGGCAGTAGAAGATCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 90 bp AGTAATGTCTCTAACAGATGGGATGCTTTTGTGGCAATTCTGTTCTaGGGATCTCCCAGTTTATTTACCACTTGCACAAGAAGAGCCTTT +
Preference number: 5 (lower is better)
Translates to: SNVSNRWDAFVAILF*GSPSLFTTCTRRAF
Trigger: AAAGGCTCTTCTTGTGCAAGTGGTAAATAAACTGGGAGATCCTCAGAACAGAATTGCCACAAAAGCATCCCATCTGTTAGAGACATTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CCA 90 bp TGGGATGTTTACAAAGTAATGTCTCTAACAGATGGGATGCTTTTGTaGCAATTCTGTTCTGAGGATCTCCCAGTTTATTTACCACTTGCA +
Preference number: 5 (lower is better)
Translates to: WDVYKVMSLTDGMLL*QFCSEDLPVYLPLA
Trigger: TGCAAGTGGTAAATAAACTGGGAGATCCTCAGAACAGAATTGCCACAAAAGCATCCCATCTGTTAGAGACATTACTTTGTAAACATCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 90 bp CCCAAAGACTTGTATTTTCAGCTCCACAGAACAGAGGGTTTCTACTaGATGGATCGTATTTATTTAACTGTTTCCCACCTTTCAAATTAT +
Preference number: 5 (lower is better)
Translates to: PKDLYFQLHRTEGFY*MDRIYLTVSHLSNY
Trigger: ATAATTTGAAAGGTGGGAAACAGTTAAATAAATACGATCCATTCAGTAGAAACCCTCTGTTCTGTGGAGCTGAAAATACAAGTCTTTGGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 90 bp TCTTTTTCACGTTTCCAGCAAAATCCATATCATCCTTTCCAGAGCTaGAACAGTTATCATCTTCAAATGTGTCAATCAGCTCTTCAAATT +
Preference number: 5 (lower is better)
Translates to: SFSRFQQNPYHPFQS*NSYHLQMCQSALQI
Trigger: AATTTGAAGAGCTGATTGACACATTTGAAGATGATAACTGTTTCAGCTCTGGAAAGGATGATATGGATTTTGCTGGAAACGTGAAAAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS GCA 90 bp ATTCAAAGATGTTCTGTTTATCTTTCTTTACTTTCGGTGTGGTACTaGCATTCTCATCAGAATGTGGTTCTGGCCTATTCTTATTTTTCA +
Preference number: 5 (lower is better)
Translates to: IQRCSVYLSLLSVWY*HSHQNVVLAYSYFS
Trigger: TGAAAAATAAGAATAGGCCAGAACCACATTCTGATGAGAATGGCAGTACCACACCGAAAGTAAAGAAAGATAAACAGAACATCTTTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000234170.10
ENST00000446769.1
CDS CCA 72 bp TGCGAACACATGCTTCAGAGGCTGGGATCTCGGTCCTaGACGCCCGCGCTCTACGCAGCGCGGAAGCGGCGG +
Preference number: 6 (lower is better)
Translates to: CEHMLQRLGSRS*TPALYAARKRR
Trigger: CCGCCGCTTCCGCGCTGCGTAGAGCGCGGGCGTCCAGGACCGAGATCCCAGCCTCTGAAGCATGTGTTCGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446769.1
CDS CAA 90 bp TCCTCGTCCGGATCTTCTACTGCCTCCTCGGGGCGCCAAGGCCGCTaGGCATGGAACTCCAAAGGCTCCTTGACTGCGGCCATGGCGGGC +
Preference number: 6 (lower is better)
Translates to: SSSGSSTASSGRQGR*AWNSKGSLTAAMAG
Trigger: GCCCGCCATGGCCGCAGTCAAGGAGCCTTTGGAGTTCCATGCCAAGCGGCCTTGGCGCCCCGAGGAGGCAGTAGAAGATCCGGACGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CCA 72 bp TCTACTGCCTCCTCGGGGCGCCAAGGCCGCTTGGCATaGAACTCCAAAGGCTCCTTGACTGCGGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: STASSGRQGRLA*NSKGSLTAAMA
Trigger: CGCCATGGCCGCAGTCAAGGAGCCTTTGGAGTTCCATGCCAAGCGGCCTTGGCGCCCCGAGGAGGCAGTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 72 bp GCCAAGGCCGCTTGGCATGGAACTCCAAAGGCTCCTTaGCTGCGGCCATGGCGGGCAAAGCATACGCGCGTG +
Preference number: 6 (lower is better)
Translates to: AKAAWHGTPKAP*LRPWRAKHTRV
Trigger: CACGCGCGTATGCTTTGCCCGCCATGGCCGCAGTCAAGGAGCCTTTGGAGTTCCATGCCAAGCGGCCTTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp CGCCAAGGCCGCTTGGCATGGAACTCCAAAGGCTCCTaGACTGCGGCCATGGCGGGCAAAGCATACGCGCGT +
Preference number: 6 (lower is better)
Translates to: RQGRLAWNSKGS*TAAMAGKAYAR
Trigger: ACGCGCGTATGCTTTGCCCGCCATGGCCGCAGTCAAGGAGCCTTTGGAGTTCCATGCCAAGCGGCCTTGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp GGATCTTCTACTGCCTCCTCGGGGCGCCAAGGCCGCTaGGCATGGAACTCCAAAGGCTCCTTGACTGCGGCC +
Preference number: 6 (lower is better)
Translates to: GSSTASSGRQGR*AWNSKGSLTAA
Trigger: GGCCGCAGTCAAGGAGCCTTTGGAGTTCCATGCCAAGCGGCCTTGGCGCCCCGAGGAGGCAGTAGAAGATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CCA 72 bp CCACTGGACAACTGTTCCAGTTTGTCAAAAGGACGCTaGCTGAAAATCCTCAGCTTCCGATTGTCTGGCAAA +
Preference number: 6 (lower is better)
Translates to: PLDNCSSLSKGR*LKILSFRLSGK
Trigger: TTTGCCAGACAATCGGAAGCTGAGGATTTTCAGCCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp CTTGAGTCCTTGTTGCCACTGGACAACTGTTCCAGTTaGTCAAAAGGACGCTGGCTGAAAATCCTCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LESLLPLDNCSS*SKGRWLKILSF
Trigger: GAAGCTGAGGATTTTCAGCCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp CTCAGCTTCCGATTGTCTGGCAAAAGGTCTGTGATAAGCAACTCTTaGAAAGTATCCAAGGCCATAAGGCACTGCTGTTTGCTGCCCTTC +
Preference number: 6 (lower is better)
Translates to: LSFRLSGKRSVISNS*KVSKAIRHCCLLPF
Trigger: GAAGGGCAGCAAACAGCAGTGCCTTATGGCCTTGGATACTTTCAAAGAGTTGCTTATCACAGACCTTTTGCCAGACAATCGGAAGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp CTTCTATCTCTTGAGTCCTTGTTGCCACTGGACAACTGTTCCAGTTaGTCAAAAGGACGCTGGCTGAAAATCCTCAGCTTCCGATTGTCT +
Preference number: 6 (lower is better)
Translates to: LLSLESLLPLDNCSS*SKGRWLKILSFRLS
Trigger: AGACAATCGGAAGCTGAGGATTTTCAGCCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 72 bp TGGACAACTGTTCCAGTTTGTCAAAAGGACGCTGGCTaGAAATCCTCAGCTTCCGATTGTCTGGCAAAAGGT +
Preference number: 6 (lower is better)
Translates to: WTTVPVCQKDAG*KSSASDCLAKG
Trigger: ACCTTTTGCCAGACAATCGGAAGCTGAGGATTTTCAGCCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS GCA 72 bp CAACATCCTGAGGCTGGGGTTTCAAAGAATATTCATTaGTGTACTCCAGATCATACCATTTGCCTCCAGGCC +
Preference number: 6 (lower is better)
Translates to: QHPEAGVSKNIH*CTPDHTICLQA
Trigger: GGCCTGGAGGCAAATGGTATGATCTGGAGTACAGCAATGAATATTCTTTGAAACCCCAGCCTCAGGATGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CCA 72 bp AGGACGCTGGCTGAAAATCCTCAGCTTCCGATTGTCTaGCAAAAGGTCTGTGATAAGCAACTCTTTGAAAGT +
Preference number: 6 (lower is better)
Translates to: RTLAENPQLPIV*QKVCDKQLFES
Trigger: ACTTTCAAAGAGTTGCTTATCACAGACCTTTTGCCAGACAATCGGAAGCTGAGGATTTTCAGCCAGCGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CCA 72 bp ATATCAGTCTTCTATCTCTTGAGTCCTTGTTGCCACTaGACAACTGTTCCAGTTTGTCAAAAGGACGCTGGC +
Preference number: 6 (lower is better)
Translates to: ISVFYLLSPCCH*TTVPVCQKDAG
Trigger: GCCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp CGATTGTCTGGCAAAAGGTCTGTGATAAGCAACTCTTaGAAAGTATCCAAGGCCATAAGGCACTGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: RLSGKRSVISNS*KVSKAIRHCCL
Trigger: CAAACAGCAGTGCCTTATGGCCTTGGATACTTTCAAAGAGTTGCTTATCACAGACCTTTTGCCAGACAATCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp TGTTCAAAATACCATAATATCAGTCTTCTATCTCTTGAGTCCTTGTaGCCACTGGACAACTGTTCCAGTTTGTCAAAAGGACGCTGGCTG +
Preference number: 6 (lower is better)
Translates to: CSKYHNISLLSLESL*PLDNCSSLSKGRWL
Trigger: CAGCCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATATTATGGTATTTTGAACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp TGGTGTTCAAAATACCATAATATCAGTCTTCTATCTCTTGAGTCCTaGTTGCCACTGGACAACTGTTCCAGTTTGTCAAAAGGACGCTGG +
Preference number: 6 (lower is better)
Translates to: WCSKYHNISLLSLES*LPLDNCSSLSKGRW
Trigger: CCAGCGTCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATATTATGGTATTTTGAACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 72 bp TCTAACAGATGGGATGCTTTTGTGGCAATTCTGTTCTaGGGATCTCCCAGTTTATTTACCACTTGCACAAGA +
Preference number: 6 (lower is better)
Translates to: SNRWDAFVAILF*GSPSLFTTCTR
Trigger: TCTTGTGCAAGTGGTAAATAAACTGGGAGATCCTCAGAACAGAATTGCCACAAAAGCATCCCATCTGTTAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS GCA 72 bp ACCATAATATCAGTCTTCTATCTCTTGAGTCCTTGTTaGCACTGGACAACTGTTCCAGTTTGTCAAAAGGAC +
Preference number: 6 (lower is better)
Translates to: TIISVFYLLSPC*HWTTVPVCQKD
Trigger: GTCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATATTATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp TTATCAAAGTGCACCCAGGAAGCAACCTCTGGTTTTTaGGTTTCTACATCAGTTTCAGGAACTGTTTCCTCT +
Preference number: 6 (lower is better)
Translates to: LSKCTQEATSGF*VSTSVSGTVSS
Trigger: AGAGGAAACAGTTCCTGAAACTGATGTAGAAACCAAAAAACCAGAGGTTGCTTCCTGGGTGCACTTTGATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp AATGTCAGCTTTCAGAGATTTGTAGACAAGGTTAAGAAACATAGCTaGCTTGGAACACGTCATCAACCCTGGATCCAACATCTTCCTGTA +
Preference number: 6 (lower is better)
Translates to: NVSFQRFVDKVKKHS*LGTRHQPWIQHLPV
Trigger: TACAGGAAGATGTTGGATCCAGGGTTGATGACGTGTTCCAAGCAAGCTATGTTTCTTAACCTTGTCTACAAATCTCTGAAAGCTGACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp CCTTTCAAATTATCAAAGTGCACCCAGGAAGCAACCTCTGGTTTTTaGGTTTCTACATCAGTTTCAGGAACTGTTTCCTCTGTCTCAAGT +
Preference number: 6 (lower is better)
Translates to: PFKLSKCTQEATSGF*VSTSVSGTVSSVSS
Trigger: ACTTGAGACAGAGGAAACAGTTCCTGAAACTGATGTAGAAACCAAAAAACCAGAGGTTGCTTCCTGGGTGCACTTTGATAATTTGAAAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp GTTTCAGCTGGTGTTCAAAATACCATAATATCAGTCTTCTATCTCTaGAGTCCTTGTTGCCACTGGACAACTGTTCCAGTTTGTCAAAAG +
Preference number: 6 (lower is better)
Translates to: VSAGVQNTIISVFYL*SPCCHWTTVPVCQK
Trigger: CTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATATTATGGTATTTTGAACACCAGCTGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp CGGAAGAGTAGCCTTTCTACTTCACCAGACACAACTCCTTTCATATaGGGATGTTTACAAAGTAATGTCTCTAACAGATGGGATGCTTTT +
Preference number: 6 (lower is better)
Translates to: RKSSLSTSPDTTPFI*GCLQSNVSNRWDAF
Trigger: AAAAGCATCCCATCTGTTAGAGACATTACTTTGTAAACATCCCAATATGAAAGGAGTTGTGTCTGGTGAAGTAGAAAGGCTACTCTTCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 72 bp CTGGAACGCTCTCACTTTCATCATCTAACACATCCATaGATGTTCCTCCATCTTCATCAACTTCAGCAAATT +
Preference number: 6 (lower is better)
Translates to: LERSHFHHLTHP*MFLHLHQLQQI
Trigger: AATTTGCTGAAGTTGATGAAGATGGAGGAACATTCATGGATGTGTTAGATGATGAAAGTGAGAGCGTTCCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234170.10
ENST00000489306.1
CDS GCA 72 bp TGTTCTGTTTATCTTTCTTTACTTTCGGTGTGGTACTaGCATTCTCATCAGAATGTGGTTCTGGCCTATTCT +
Preference number: 6 (lower is better)
Translates to: CSVYLSLLSVWY*HSHQNVVLAYS
Trigger: AGAATAGGCCAGAACCACATTCTGATGAGAATGGCAGTACCACACCGAAAGTAAAGAAAGATAAACAGAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234170.10
ENST00000446769.1
CDS CAA 72 bp AAAGAATATTCATTGCTGTACTCCAGATCATACCATTaGCCTCCAGGCCTAAGTAACAAAGTCTGTCTCTCA +
Preference number: 6 (lower is better)
Translates to: KEYSLLYSRSYH*PPGLSNKVCLS
Trigger: TGAGAGACAGACTTTGTTACTTAGGCCTGGAGGCAAATGGTATGATCTGGAGTACAGCAATGAATATTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000234170.10
ENST00000446769.1
CDS CAA 72 bp TACCATAATATCAGTCTTCTATCTCTTGAGTCCTTGTaGCCACTGGACAACTGTTCCAGTTTGTCAAAAGGA +
Preference number: 6 (lower is better)
Translates to: YHNISLLSLESL*PLDNCSSLSKG
Trigger: TCCTTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATATTATGGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp TTTCAGAGATTTGTAGACAAGGTTAAGAAACATAGCTaGCTTGGAACACGTCATCAACCCTGGATCCAACAT +
Preference number: 6 (lower is better)
Translates to: FQRFVDKVKKHS*LGTRHQPWIQH
Trigger: ATGTTGGATCCAGGGTTGATGACGTGTTCCAAGCAAGCTATGTTTCTTAACCTTGTCTACAAATCTCTGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp TGTTTCTTTTTCTTGATGATACTTTTTGCATCTCTGTaGTGTAGCCAGTCATCACGTTCAGCCTCCCATCTA +
Preference number: 6 (lower is better)
Translates to: CFFFLMILFASL*CSQSSRSASHL
Trigger: TAGATGGGAGGCTGAACGTGATGACTGGCTACACAACAGAGATGCAAAAAGTATCATCAAGAAAAAGAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000234170.10
ENST00000489306.1
CDS TCA 72 bp TTCGGTATACAAATCGATCCAAAAATCTCATTAGAGTaGAATCCTGCAGTGGGTCCCCTGAATACTGAATAT +
Preference number: 6 (lower is better)
Translates to: FGIQIDPKISLE*NPAVGPLNTEY
Trigger: ATATTCAGTATTCAGGGGACCCACTGCAGGATTTCACTCTAATGAGATTTTTGGATCGATTTGTATACCGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp GTTTACAAAGTAATGTCTCTAACAGATGGGATGCTTTaGTGGCAATTCTGTTCTGAGGATCTCCCAGTTTAT +
Preference number: 6 (lower is better)
Translates to: VYKVMSLTDGML*WQFCSEDLPVY
Trigger: ATAAACTGGGAGATCCTCAGAACAGAATTGCCACAAAAGCATCCCATCTGTTAGAGACATTACTTTGTAAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp AGCCTTTCTACTTCACCAGACACAACTCCTTTCATATaGGGATGTTTACAAAGTAATGTCTCTAACAGATGG +
Preference number: 6 (lower is better)
Translates to: SLSTSPDTTPFI*GCLQSNVSNRW
Trigger: CCATCTGTTAGAGACATTACTTTGTAAACATCCCAATATGAAAGGAGTTGTGTCTGGTGAAGTAGAAAGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp TATTGGGATGTTTACAAAGTAATGTCTCTAACAGATGGGATGCTTTaGTGGCAATTCTGTTCTGAGGATCTCCCAGTTTATTTACCACTT +
Preference number: 6 (lower is better)
Translates to: YWDVYKVMSLTDGML*WQFCSEDLPVYLPL
Trigger: AAGTGGTAAATAAACTGGGAGATCCTCAGAACAGAATTGCCACAAAAGCATCCCATCTGTTAGAGACATTACTTTGTAAACATCCCAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 72 bp ACAATTGCCTTCATCCAGGTAGAAGAGGCTCCCTTTTaGCTATTCGTCTTACTTTTGAATAAGTTGATTTCA +
Preference number: 6 (lower is better)
Translates to: TIAFIQVEEAPF*LFVLLLNKLIS
Trigger: TGAAATCAACTTATTCAAAAGTAAGACGAATAGTCAAAAGGGAGCCTCTTCTACCTGGATGAAGGCAATTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS TCA 72 bp TTGTATTTTCAGCTCCACAGAACAGAGGGTTTCTACTaGATGGATCGTATTTATTTAACTGTTTCCCACCTT +
Preference number: 6 (lower is better)
Translates to: LYFQLHRTEGFY*MDRIYLTVSHL
Trigger: AAGGTGGGAAACAGTTAAATAAATACGATCCATTCAGTAGAAACCCTCTGTTCTGTGGAGCTGAAAATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CCA 72 bp TACAAAGTAATGTCTCTAACAGATGGGATGCTTTTGTaGCAATTCTGTTCTGAGGATCTCCCAGTTTATTTA +
Preference number: 6 (lower is better)
Translates to: YKVMSLTDGMLL*QFCSEDLPVYL
Trigger: TAAATAAACTGGGAGATCCTCAGAACAGAATTGCCACAAAAGCATCCCATCTGTTAGAGACATTACTTTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 72 bp AAATACCATAATATCAGTCTTCTATCTCTTGAGTCCTaGTTGCCACTGGACAACTGTTCCAGTTTGTCAAAA +
Preference number: 6 (lower is better)
Translates to: KYHNISLLSLES*LPLDNCSSLSK
Trigger: TTTTGACAAACTGGAACAGTTGTCCAGTGGCAACAAGGACTCAAGAGATAGAAGACTGATATTATGGTATTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000234170.10
CDS CAA 90 bp GATCCAACATCTTCCTGTATAATGCTGTGTAATATCGATCCGATATaGTCTGCTGAGAATTCATTACTTGGAAAAGCAACATTAAAGCCT +
Preference number: 6 (lower is better)
Translates to: DPTSSCIMLCNIDPI*SAENSLLGKATLKP
Trigger: AGGCTTTAATGTTGCTTTTCCAAGTAATGAATTCTCAGCAGACAATATCGGATCGATATTACACAGCATTATACAGGAAGATGTTGGATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000234170.10