RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEBPG (Homo sapiens)

Ensembl gene IDs: ENSG00000153879

Ensembl transcript IDs: ENST00000284000.9, ENST00000585933.2, ENST00000652630.1

Found 391 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGGCATCCCAACAACTGATTGCAGGGGCCAGCAGCAGGAAGAGCTaGTCTGATCTCACCATCCGCAGCCAAAACCAGCCAAAGAGCACC +
Preference number: 1 (lower is better)
Translates to: LASQQLIAGASSRKS*SDLTIRSQNQPKST
Trigger: GGTGCTCTTTGGCTGGTTTTGGCTGCGGATGGTGAGATCAGAGCAGCTCTTCCTGCTGCTGGCCCCTGCAATCAGTTGTTGGGATGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CCA 90 bp CAAGGTAAGCTGGTGTTGGACCCTAGAAACCCCTATCCTGTCTCCTaGCTCTATAGGGAGTTAACAGCCCTCCTGGGACAGCTTCTCCTG +
Preference number: 1 (lower is better)
Translates to: QGKLVLDPRNPYPVS*LYRELTALLGQLLL
Trigger: CAGGAGAAGCTGTCCCAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 90 bp ACCTCACGACTCTTAAGAATGGCTTTGCTGAGTTGCTGGACACCATaGTGTCTTCTCCTGCCCAGAAACGGCACGGTCAGCAATCTTCCA +
Preference number: 1 (lower is better)
Translates to: TSRLLRMALLSCWTP*CLLLPRNGTVSNLP
Trigger: TGGAAGATTGCTGACCGTGCCGTTTCTGGGCAGGAGAAGACATCATGGTGTCCAGCAACTCAGCAAAGCCATTCTTAAGAGTCGTGAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR GCA 90 bp CTGCCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTaGAACTTGAGTTTTATTCTGGCTACATCATCCCAAGTCCTAGTA +
Preference number: 1 (lower is better)
Translates to: LPRNGTVSNLPPTGG*NLSFILATSSQVLV
Trigger: TACTAGGACTTGGGATGATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 90 bp GTTCAGGTACAAGGTCTCAAGCCCTCTAATGGGGACTGGGAAACGTaGAAAGCTGCTACAATTTCCTCTCCTTTAATACCAAATGTTAAA +
Preference number: 1 (lower is better)
Translates to: VQVQGLKPSNGDWET*KAATISSPLIPNVK
Trigger: TTTAACATTTGGTATTAAAGGAGAGGAAATTGTAGCAGCTTTTCACGTTTCCCAGTCCCCATTAGAGGGCTTGAGACCTTGTACCTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR GCA 90 bp ATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTaGTTGCTTATACATTCAAGTGACCTAATGCATCTCCAATTAAGT +
Preference number: 1 (lower is better)
Translates to: IEFPRDLNVCSAYHR*LLIHSSDLMHLQLS
Trigger: ACTTAATTGGAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 90 bp TGCAACTTGAGTTTTATTCTGGCTACATCATCCCAAGTCCTAGTATaGAACAGCAATGTGGCCAAAAATGACCATGTTCAAATAAGATAC +
Preference number: 1 (lower is better)
Translates to: CNLSFILATSSQVLV*NSNVAKNDHVQIRY
Trigger: GTATCTTATTTGAACATGGTCATTTTTGGCCACATTGCTGTTTCATACTAGGACTTGGGATGATGTAGCCAGAATAAAACTCAAGTTGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTTTCAGCCATTGACATaGGTGGTGTCGGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHFQPLT*VVSVVT
Trigger: TGTGACCACCGACACCACTCATGTCAATGGCTGAAA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACACCTTCTGCGCGGCCTaGCAGTTCCCCATTCCTTTT +
Preference number: 2 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDTFCAA*QFPIPF
Trigger: AAAAGGAATGGGGAACTGGCAGGCCGCGCAGAAGGT...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTCAACTCTTCAGTGCTaGTCCCAGAAAATAGCCTCC +
Preference number: 2 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSSTLQC*SQKIAS
Trigger: GGAGGCTATTTTCTGGGATCAGCACTGAAGAGTTGA...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCCGGAGGGTGCAACTTaGGTTTTATTCTGGCTACAT +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHPEGAT*VLFWLH
Trigger: ATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCCACCAACCGGAGGGTaGAACTTGAGTTTTATTCTG +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHPPTGG*NLSFIL
Trigger: CAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACAAGGTAAGCTGGTGTTaGACCCTAGAAACCCCTATC +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHKVSWC*TLETPI
Trigger: GATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTT...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACACAACTTTCAGCCATTaGCATGAGTGGTGTCGGTGG +
Preference number: 2 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDTTFSH*HEWCRW
Trigger: CCACCGACACCACTCATGTCAATGGCTGAAAGTTGT...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCCTGTGGGTGTGTCCTaGCTAGTTTTTCAAAACATC +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHPVGVS*LVFQNI
Trigger: GATGTTTTGAAAAACTAGCCAGGACACACCCACAGG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTCCCAAGTCCTAGTATaGAACAGCAATGTGATGAAG +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHSQVLV*NSNVMK
Trigger: CTTCATCACATTGCTGTTTCATACTAGGACTTGGGA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000652630.1
3UTR-3UTR GCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGAAACCAAGAACCTTCTaGGCGGCCTGCCAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: SPKASESTECKMGCSGTRKPRTF*AACQFP
Trigger: GGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTT...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTCTTGTGTTCTGATTTaGAATACTGAGTACACACCC +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHSCVLI*NTEYTP
Trigger: GGGTGTGTACTCAGTATTTCAAATCAGAACACAAGA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCACCTTCTGCGCGGCCTaGCAGTTCCCCATTCCTTTT +
Preference number: 2 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPTFCAA*QFPIPF
Trigger: AAAAGGAATGGGGAACTGGCAGGCCGCGCAGAAGGT...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTAATAAACAGAAGCAGTaGTACAAAGTCTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSNKQKQ*YKVWKA
Trigger: GGCTTTCCAGACTTTGTACCACTGCTTCTGTTTATT...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACGAGATGGCATGGAGTTaGTACATTTCTCTAATAATC +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHEMAWS*YISLII
Trigger: GATTATTAGAGAAATGTATCAACTCCATGCCATCTC...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACGCTTATACATTCAAGTaGCCTAATGCATCTCCAATT +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHAYTFK*PNASPI
Trigger: AATTGGAGATGCATTAGGTCACTTGAATGTATAAGC...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCATGATGTCTTCTCCTaGCCAGAAACGGCACGGTCA +
Preference number: 2 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPHDVFS*PETARS
Trigger: TGACCGTGCCGTTTCTGGGCAGGAGAAGACATCATG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACAACATTTTTGTTCTCTaGCTAATTGCTTGCTTCTGC +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHNIFVL*LIACFC
Trigger: GCAGAAGCAAGCAATTAGGCAGAGAACAAAAATGTT...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGTGGGTCTTTGAGTCATaGAAATGGACAACTTTCAGC +
Preference number: 2 (lower is better)
Translates to: PRNPYPVSWLYRELTALLWVFES*KWTTFS
Trigger: GCTGAAAGTTGTCCATTTCCATGACTCAAAGACCCA...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTATGAAACAGCAATGTaGCCAAAAATGACCATGTTC +
Preference number: 2 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSYETAM*PKMTMF
Trigger: GAACATGGTCATTTTTGGCCACATTGCTGTTTCATA...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTATGAAACAGCAATGTaGCCAAAAATGACCATGTTC +
Preference number: 2 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHYETAM*PKMTMF
Trigger: GAACATGGTCATTTTTGGCCACATTGCTGTTTCATA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR TCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTCAACTCTTCAGTGCTaGTCCCAGAAAATAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCSTLQC*SQKIAS
Trigger: GGAGGCTATTTTCTGGGATCAGCACTGAAGAGTTGA...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGAAAATAGCCTCCAATaGGTCTTTGAGTCATGGAAA +
Preference number: 2 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDENSLQ*VFESWK
Trigger: TTTCCATGACTCAAAGACCCATTGGAGGCTATTTTC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGGAAAATAGCCTCCAATaGGTCTTTGAGTCATGGAAA +
Preference number: 2 (lower is better)
Translates to: PRNPYPVSWLYRELTALLENSLQ*VFESWK
Trigger: TTTCCATGACTCAAAGACCCATTGGAGGCTATTTTC...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCTCAACTCTTCAGTGCTaGTCCCAGAAAATAGCCTCC +
Preference number: 2 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPSTLQC*SQKIAS
Trigger: GGAGGCTATTTTCTGGGATCAGCACTGAAGAGTTGA...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCATGATGTCTTCTCCTaGCCAGAAACGGCACGGTCA +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHHDVFS*PETARS
Trigger: TGACCGTGCCGTTTCTGGGCAGGAGAAGACATCATG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGATATACCTTAACATTTaGGGGATTTTGATTCCCACA +
Preference number: 2 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTIYLNI*GILIPT
Trigger: TGTGGGAATCAAAATCCCCCAAATGTTAAGGTATAT...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATTTTCAGCCATTGACATaGGTGGTGTCGGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHFQPLT*VVSVVT
Trigger: TGTGACCACCGACACCACTCATGTCAATGGCTGAAA...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGAAACCAAGAACCTTCTaGGCGGCCTGCCAGTTCCCC +
Preference number: 2 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKKPRTF*AACQFP
Trigger: GGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTT...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATTTTCAGCCATTGACATaGGTGGTGTCGGTGGTCACA +
Preference number: 2 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHFQPLT*VVSVVT
Trigger: TGTGACCACCGACACCACTCATGTCAATGGCTGAAA...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATACAACTTTCAGCCATTaGCATGAGTGGTGTCGGTGG +
Preference number: 2 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHTTFSH*HEWCRW
Trigger: CCACCGACACCACTCATGTCAATGGCTGAAAGTTGT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCCTCCAATGGGTCTTTaGGTCATGGAAATGGACAAC +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHPPMGL*VMEMDN
Trigger: GTTGTCCATTTCCATGACTCAAAGACCCATTGGAGG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCCGGAGGGTGCAACTTaGGTTTTATTCTGGCTACAT +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHPEGAT*VLFWLH
Trigger: ATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAAGTTGCTGGACACCATaGTGTCTTCTCCTGCCCAGA +
Preference number: 2 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKSCWTP*CLLLPR
Trigger: TCTGGGCAGGAGAAGACATCATGGTGTCCAGCAACT...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGTCTGATTTGAAATACTaGGTACACACCCCTGATGCT +
Preference number: 2 (lower is better)
Translates to: SPKASESTECKMGCSGTRSDLKY*VHTPDA
Trigger: AGCATCAGGGGTGTGTACTCAGTATTTCAAATCAGA...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR GCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGACCTTCTGCGCGGCCTaGCAGTTCCCCATTCCTTTT +
Preference number: 2 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKTFCAA*QFPIPF
Trigger: AAAAGGAATGGGGAACTGGCAGGCCGCGCAGAAGGT...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCCCTATCCTGTCTCCTaGCTCTATAGGGAGTTAACA +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHPYPVS*LYRELT
Trigger: TGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATCCTCCAATGGGTCTTTaGGTCATGGAAATGGACAAC +
Preference number: 2 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHPPMGL*VMEMDN
Trigger: GTTGTCCATTTCCATGACTCAAAGACCCATTGGAGG...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCCATGGCAGCTATTTTaGACACAAGAGAAACTACCT +
Preference number: 2 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLPWQLF*TQEKLP
Trigger: AGGTAGTTTCTCTTGTGTTCAAAATAGCTGCCATGG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR CCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCTGGGTCTTTGAGTCATaGAAATGGACAACTTTCAGC +
Preference number: 2 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLWVFES*KWTTFS
Trigger: GCTGAAAGTTGTCCATTTCCATGACTCAAAGACCCA...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGATATACCTTAACATTTaGGGGATTTTGATTCCCACA +
Preference number: 2 (lower is better)
Translates to: SPKASESTECKMGCSGTRIYLNI*GILIPT
Trigger: TGTGGGAATCAAAATCCCCCAAATGTTAAGGTATAT...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATAATAAACAGAAGCAGTaGTACAAAGTCTGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHNKQKQ*YKVWKA
Trigger: GGCTTTCCAGACTTTGTACCACTGCTTCTGTTTATT...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATATCTCTCATCCTTCATaGGTAGATTCATACTCCAAG +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHISHPS*VDSYSK
Trigger: CTTGGAGTATGAATCTACCCATGAAGGATGAGAGAT...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATGAAAATAGCCTCCAATaGGTCTTTGAGTCATGGAAA +
Preference number: 2 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHENSLQ*VFESWK
Trigger: TTTCCATGACTCAAAGACCCATTGGAGGCTATTTTC...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAATCTTGTGTTCTGATTTaGAATACTGAGTACACACCC +
Preference number: 2 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKSCVLI*NTEYTP
Trigger: GGGTGTGTACTCAGTATTTCAAATCAGAACACAAGA...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATGTCAATTCATATAACTaGTATAAATTCCATGGGAGC +
Preference number: 2 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHVNSYN*YKFHGS
Trigger: GCTCCCATGGAATTTATACCAGTTATATGAATTGAC...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATATATACCTTAACATTTaGGGGATTTTGATTCCCACA +
Preference number: 2 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHIYLNI*GILIPT
Trigger: TGTGGGAATCAAAATCCCCCAAATGTTAAGGTATAT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CCA 72 bp CTGGTGTTGGACCCTAGAAACCCCTATCCTGTCTCCTaGCTCTATAGGGAGTTAACAGCCCTCCTGGGACAG +
Preference number: 3 (lower is better)
Translates to: LVLDPRNPYPVS*LYRELTALLGQ
Trigger: CTGTCCCAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGGGTCCAACACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCAAGGTAAGCTGGTGTaGGACCCTAGAAACCCCTAT +
Preference number: 3 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHQGKLV*DPRNPY
Trigger: ATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTTG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 72 bp CTCTTAAGAATGGCTTTGCTGAGTTGCTGGACACCATaGTGTCTTCTCCTGCCCAGAAACGGCACGGTCAGC +
Preference number: 3 (lower is better)
Translates to: LLRMALLSCWTP*CLLLPRNGTVS
Trigger: GCTGACCGTGCCGTTTCTGGGCAGGAGAAGACATCATGGTGTCCAGCAACTCAGCAAAGCCATTCTTAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTCTCTGCCTAATTGCTaGCTTCTGCTAAACTTTGCA +
Preference number: 3 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHSLPNC*LLLNFA
Trigger: TGCAAAGTTTAGCAGAAGCAAGCAATTAGGCAGAGA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR GCA 72 bp AACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTaGAACTTGAGTTTTATTCTGGCTACATCATCCCAA +
Preference number: 3 (lower is better)
Translates to: NGTVSNLPPTGG*NLSFILATSSQ
Trigger: TTGGGATGATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CCA 72 bp TCATGGGTAGATTCATACTCCAAGGTAAGCTGGTGTTaGACCCTAGAAACCCCTATCCTGTCTCCTGGCTCT +
Preference number: 3 (lower is better)
Translates to: SWVDSYSKVSWC*TLETPILSPGS
Trigger: AGAGCCAGGAGACAGGATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTTGGAGTATGAATCTACCCATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTGGAGATGGCATGGAGTaGATACATTTCTCTAATAAT +
Preference number: 3 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSGDGME*IHFSNN
Trigger: ATTATTAGAGAAATGTATCAACTCCATGCCATCTCC...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR CAA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCAAATTACACACTCATaGCTTTCTATAGCTCTACGA +
Preference number: 3 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDQITHS*LSIALR
Trigger: TCGTAGAGCTATAGAAAGCAATGAGTGTGTAATTTG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGACCGGAGGGTGCAACTaGAGTTTTATTCTGGCTACA +
Preference number: 3 (lower is better)
Translates to: SPKASESTECKMGCSGTRTGGCN*SFILAT
Trigger: TGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGGT...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCTCTTAAGAATGGCTTaGCTGAGTTGCTGGACACCA +
Preference number: 3 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPLLRMA*LSCWTP
Trigger: TGGTGTCCAGCAACTCAGCAAAGCCATTCTTAAGAG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATAACATTTGGGGGATTTaGATTCCCACAAAAACCTCT +
Preference number: 3 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYNIWGI*IPTKTS
Trigger: AGAGGTTTTTGTGGGAATCAAAATCCCCCAAATGTT...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 72 bp CAAGGTCTCAAGCCCTCTAATGGGGACTGGGAAACGTaGAAAGCTGCTACAATTTCCTCTCCTTTAATACCA +
Preference number: 3 (lower is better)
Translates to: QGLKPSNGDWET*KAATISSPLIP
Trigger: TGGTATTAAAGGAGAGGAAATTGTAGCAGCTTTTCACGTTTCCCAGTCCCCATTAGAGGGCTTGAGACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGTCTCTGCCTAATTGCTaGCTTCTGCTAAACTTTGCA +
Preference number: 3 (lower is better)
Translates to: SPKASESTECKMGCSGTRSLPNC*LLLNFA
Trigger: TGCAAAGTTTAGCAGAAGCAAGCAATTAGGCAGAGA...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 72 bp CACACTCATGACCTGCATTTCGGACCTGGTCGTGTTTaGTTAAAATCTTACTACTTAGTGATCTGCACTGGC +
Preference number: 3 (lower is better)
Translates to: HTHDLHFGPGRV*LKSYYLVICTG
Trigger: GCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCGAAATGCAGGTCATGAGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CCA 72 bp ATTCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATaGGTTGTTCAGGTACAAGGTCTCAAGCCCTCTAAT +
Preference number: 3 (lower is better)
Translates to: ILLRHQKALSAK*VVQVQGLKPSN
Trigger: ATTAGAGGGCTTGAGACCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCCCATGGCAGCTATTTaGAACACAAGAGAAACTACC +
Preference number: 3 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHPMAAI*NTRETT
Trigger: GGTAGTTTCTCTTGTGTTCAAAATAGCTGCCATGGG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR CAA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGCAAATTACACACTCATaGCTTTCTATAGCTCTACGA +
Preference number: 3 (lower is better)
Translates to: SPKASESTECKMGCSGTRQITHS*LSIALR
Trigger: TCGTAGAGCTATAGAAAGCAATGAGTGTGTAATTTG...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR-3UTR CAA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCGGAGATGGCATGGAGTaGATACATTTCTCTAATAAT +
Preference number: 3 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPGDGME*IHFSNN
Trigger: ATTATTAGAGAAATGTATCAACTCCATGCCATCTCC...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR TCA 72 bp AAAAACGTTGACAAAGACAATCTAAACTACCAACACTaGCGTAAGCCAGACTCTAGAGTCCCTACTTTAGCG +
Preference number: 3 (lower is better)
Translates to: KNVDKDNLNYQH*RKPDSRVPTLA
Trigger: CGCTAAAGTAGGGACTCTAGAGTCTGGCTTACGTCAGTGTTGGTAGTTTAGATTGTCTTTGTCAACGTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR GCA 72 bp CCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTaGTTGCTTATACATTCAAGTGACCTAATGCATCTC +
Preference number: 3 (lower is better)
Translates to: PRDLNVCSAYHR*LLIHSSDLMHL
Trigger: GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR TCA 72 bp AGTTTTATTCTGGCTACATCATCCCAAGTCCTAGTATaGAACAGCAATGTGGCCAAAAATGACCATGTTCAA +
Preference number: 3 (lower is better)
Translates to: SFILATSSQVLV*NSNVAKNDHVQ
Trigger: TTGAACATGGTCATTTTTGGCCACATTGCTGTTTCATACTAGGACTTGGGATGATGTAGCCAGAATAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
3UTR-3UTR CAA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGAACATTTGGGGGATTTaGATTCCCACAAAAACCTCT +
Preference number: 3 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKNIWGI*IPTKTS
Trigger: AGAGGTTTTTGTGGGAATCAAAATCCCCCAAATGTT...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTGCTGGCTGTCGGCCCTaGTCCGCTCCCTCCAACTAT +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSAGCRP*SAPSNY
Trigger: ATAGTTGGAGGGAGCGGAGCAGGGCCGACAGCCAGC...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR CCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCACATGTACCTCCGCTaGCTGTCGGCCCTGCTCCGC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDHMYLR*LSALLR
Trigger: GCGGAGCAGGGCCGACAGCCAGCGGAGGTACATGTG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR TCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCCAGCAGGCACCAGCTaGGGAACCTGCTGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDPAGTS*GTCCKP
Trigger: CGGCTTACAGCAGGTTCCTCAGCTGGTGCCTGCTGG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCAGGAAGAGCTGCTCTaGTCTCACCATCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHQEELL*SHHPQP
Trigger: TGGCTGCGGATGGTGAGATCAGAGCAGCTCTTCCTG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTCCTGCTGTAAGCCGCTaGCATGTGCCTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSPAVSR*HVPGYG
Trigger: TCCATACCCAGGCACATGCCAGCGGCTTACAGCAGG...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGTGGCATCCCAACAACTaGTTGCAGGGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTWHPNN*LQGPAA
Trigger: TGCTGCTGGCCCCTGCAATCAGTTGTTGGGATGCCA...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACAGTTGCTGGACACCATaGTGTCTTCTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHSCWTP*CLLLPR
Trigger: TCTGGGCAGGAGAAGACATCATGGTGTCCAGCAACT...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTGGGCGAACTCTTTTTaGTCTGCTTGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHWANSF*SACWEP
Trigger: TGGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTGGGGACTGGGAAACGTaGAAAGCTGCTACAATTTCC +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSGDWET*KAATIS
Trigger: GGAAATTGTAGCAGCTTTTCACGTTTCCCAGTCCCC...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTTGGGCACTCTCCCTTaGCAACACAGAACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHLGTLP*QHRTGR
Trigger: TCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTCGTTCACCCCTGGAGTaGTGTTTTGCTGCGATATCT +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSRSPLE*CFAAIS
Trigger: AGATATCGCAGCAAAACAGCACTCCAGGGGTGAACG...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTCCTGCTGTAAGCCGCTaGCATGTGCCTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIPAVSR*HVPGYG
Trigger: TCCATACCCAGGCACATGCCAGCGGCTTACAGCAGG...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTCCGGAGGGTGCAACTTaGGTTTTATTCTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSPEGAT*VLFWLH
Trigger: ATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGG...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCCCGAAGCTCTAAATTaGTTCATTCCCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTPEALN*FIPHTW
Trigger: CCACGTGTGGGGAATGAATCAATTTAGAGCTTCGGG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTGGCATCAGAAAGCACTaGGTGCAAAATGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSGIRKH*VQNGLF
Trigger: GAACAACCCATTTTGCACTCAGTGCTTTCTGATGCC...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCGTTCACCCCTGGAGTaGTGTTTTGCTGCGATATCT +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTRSPLE*CFAAIS
Trigger: AGATATCGCAGCAAAACAGCACTCCAGGGGTGAACG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGTCTTTTTGCTCTGCTTaGTGGGAGCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTSFCSA*WEPQLC
Trigger: GCAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGA...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACTGGGCGAACTCTTTTTaGTCTGCTTGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDWANSF*SACWEP
Trigger: TGGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCA...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGGGACTGTACGTTGTCTaGAAGGTTGTGTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTGLYVV*KVVCML
Trigger: GAGCATGCACACAACCTTGCAGACAACGTACAGTCC...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTACCTTCTGCGCGGCCTaGCAGTTCCCCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPITFCAA*QFPIPF
Trigger: AAAAGGAATGGGGAACTGGCAGGCCGCGCAGAAGGT...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGATCCCAACAACTGATTaGAGGGGCCAGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLIPTTD*RGQQQE
Trigger: TTCCTGCTGCTGGCCCCTGCAATCAGTTGTTGGGAT...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTGGGACAGCTTCTCCTaGGCTCCAGTTTTACATTCA +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHWDSFS*APVLHS
Trigger: TGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCCTCCAATGGGTCTTTaGGTCATGGAAATGGACAAC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTPPMGL*VMEMDN
Trigger: GTTGTCCATTTCCATGACTCAAAGACCCATTGGAGG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGTCAACTCTTCAGTGCTaGTCCCAGAAAATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTSTLQC*SQKIAS
Trigger: GGAGGCTATTTTCTGGGATCAGCACTGAAGAGTTGA...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCTAAACTACCAACACTaGCGTAAGCCAGACTCTAGA +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHLNYQH*RKPDSR
Trigger: TCTAGAGTCTGGCTTACGTCAGTGTTGGTAGTTTAG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR GCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGTCTTTTTGCTCTGCTTaGTGGGAGCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLSFCSA*WEPQLC
Trigger: GCAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGA...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACTTCCTCTCTCGGCGTTaGCGATACTCGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDFLSRR*RYSSLF
Trigger: AAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAA...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTATCCCAACAACTGATTaGAGGGGCCAGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIIPTTD*RGQQQE
Trigger: TTCCTGCTGCTGGCCCCTGCAATCAGTTGTTGGGAT...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGCGCTCCCTCCAACTATaGCTGCGAAGTGCTTCATTT +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLRSLQL*LRSASF
Trigger: AAATGAAGCACTTCGCAGGCATAGTTGGAGGGAGCG...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR CCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACAATTCCGTTCACCCCTaGAGTGCTGTTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDNSVHP*SAVLLR
Trigger: TCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATT...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTCCTGTGGGTGTGTCCTaGCTAGTTTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSPVGVS*LVFQNI
Trigger: GATGTTTTGAAAAACTAGCCAGGACACACCCACAGG...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACGCACTGAGTGCAAAATaGGTTGTTCAGGTACAAGGT +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHALSAK*VVQVQG
Trigger: ACCTTGTACCTGAACAACCCATTTTGCACTCAGTGC...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTTTCAGCCATTGACATaGGTGGTGTCGGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIFQPLT*VVSVVT
Trigger: TGTGACCACCGACACCACTCATGTCAATGGCTGAAA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTACAACTTTCAGCCATTaGCATGAGTGGTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPITTFSH*HEWCRW
Trigger: CCACCGACACCACTCATGTCAATGGCTGAAAGTTGT...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCCTCCAATGGGTCTTTaGGTCATGGAAATGGACAAC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDPPMGL*VMEMDN
Trigger: GTTGTCCATTTCCATGACTCAAAGACCCATTGGAGG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCCATGGCAGCTATTTTaGACACAAGAGAAACTACCT +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHPWQLF*TQEKLP
Trigger: AGGTAGTTTCTCTTGTGTTCAAAATAGCTGCCATGG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR TCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTCTGATTTGAAATACTaGGTACACACCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHSDLKY*VHTPDA
Trigger: AGCATCAGGGGTGTGTACTCAGTATTTCAAATCAGA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCAGGAAGAGCTGCTCTaGTCTCACCATCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPQEELL*SHHPQP
Trigger: TGGCTGCGGATGGTGAGATCAGAGCAGCTCTTCCTG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATTCGATCACCGCAAGCTaGGCCCTTCTAGAAGATCAG +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYSITAS*ALLEDQ
Trigger: CTGATCTTCTAGAAGGGCTCAGCTTGCGGTGATCGA...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACTTTGCTGCGATATCTTaGTCATTTGGGCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDFAAIS*SFGHSP
Trigger: GGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAA...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGGTGTCTTGTGCTTTCTaGTTGCTTTTCAACCGGCTC +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLVSCAF*LLFNRL
Trigger: GAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGACAC...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTCTGCAGTGTGTCTTGTaGTTTCTGCTTGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSLQCVL*FLLAFQ
Trigger: TTGAAAAGCAAGCAGAAAGCACAAGACACACTGCAG...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTGGACTGTACGTTGTCTaGAAGGTTGTGTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIGLYVV*KVVCML
Trigger: GAGCATGCACACAACCTTGCAGACAACGTACAGTCC...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTAAACCAAGAACCTTCTaGGCGGCCTGCCAGTTCCCC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSKPRTF*AACQFP
Trigger: GGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCCACCAACCGGAGGGTaGAACTTGAGTTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDPPTGG*NLSFIL
Trigger: CAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTACTACTTAGTGATCTaGACTGGCATCCCAACAACT +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHYYLVI*TGIPTT
Trigger: AGTTGTTGGGATGCCAGTGCAGATCACTAAGTAGTA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGCCCTCCAACTATGCCTaGGAAGTGCTTCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLPSNYA*EVLHFF
Trigger: GAAGAAATGAAGCACTTCGCAGGCATAGTTGGAGGG...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR CCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGATATCTTGCTCATTTaGGCACTCTCCCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDDILLI*ALSLAN
Trigger: GTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCACTGTTTCGATCCATaGGCGAACTCTTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTHCFDP*ANSFCS
Trigger: AGAGCAAAAAGAGTTCGCCCATGGATCGAAACAGTG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTGGGTCTTTGAGTCATaGAAATGGACAACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHWVFES*KWTTFS
Trigger: GCTGAAAGTTGTCCATTTCCATGACTCAAAGACCCA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGTGGGACAGCTTCTCCTaGGCTCCAGTTTTACATTCA +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLWDSFS*APVLHS
Trigger: TGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCA...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCCTGTGGGTGTGTCCTaGCTAGTTTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTPVGVS*LVFQNI
Trigger: GATGTTTTGAAAAACTAGCCAGGACACACCCACAGG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGGCACTGAGTGCAAAATaGGTTGTTCAGGTACAAGGT +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTALSAK*VVQVQG
Trigger: ACCTTGTACCTGAACAACCCATTTTGCACTCAGTGC...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATCCAGCAGGCACCAGCTaGGGAACCTGCTGTAAGCCG +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHPAGTS*GTCCKP
Trigger: CGGCTTACAGCAGGTTCCTCAGCTGGTGCCTGCTGG...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTCAACTCTTCAGTGCTaGTCCCAGAAAATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPISTLQC*SQKIAS
Trigger: GGAGGCTATTTTCTGGGATCAGCACTGAAGAGTTGA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGCTAAACTACCAACACTaGCGTAAGCCAGACTCTAGA +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLLNYQH*RKPDSR
Trigger: TCTAGAGTCTGGCTTACGTCAGTGTTGGTAGTTTAG...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTATCTTCACATGTACCTaGTCCTCTAGCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSIFTCT*SSSPPA
Trigger: GGCAGGCGGGCTAGAGGAGCAGGTACATGTGAAGAT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000652630.1
CDS-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCATCTTCACATGTACCTaGTCCTCTAGCCCGCCTGCC +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPIFTCT*SSSPPA
Trigger: GGCAGGCGGGCTAGAGGAGCAGGTACATGTGAAGAT...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTTTGCTGCGATATCTTaGTCATTTGGGCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIFAAIS*SFGHSP
Trigger: GGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGGTCTGCAAGGTTGTGTaGATGCTCAAGAAACAAATC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTVCKVV*MLKKQI
Trigger: GATTTGTTTCTTGAGCATGCACACAACCTTGCAGAC...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACTGCATTGTCGCCATCTaGTGTCGTATTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDCIVAI*CRIFSA
Trigger: AGCACTGAAAATACGACAGCAGATGGCGACAATGCA...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCCTACCATAGGTGCTTaGTTATACATTCAAGTGACC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTPTIGA*LYIQVT
Trigger: GGTCACTTGAATGTATAAGCAAGCACCTATGGTAGG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGAGCGCCTACCATAGGTaGTTGCTTATACATTCAAGT +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTSAYHR*LLIHSS
Trigger: ACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCT...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATTTCACACTCATGACCTaGATTTCGGACCTGGTCGTG +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYFTLMT*ISDLVV
Trigger: CACGACCAGGTCCGAAATGCAGGTCATGAGTGTGAA...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCGTTCAACAGTAAAGTaGAGGACATTCCAACAGCTC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDRSTVK*RTFQQL
Trigger: GAGCTGTTGGAATGTCCTGCACTTTACTGTTGAACG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR CCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCCTGCTGTAAGCCGCTaGCATGTGCCTGGGTATGGA +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLPAVSR*HVPGYG
Trigger: TCCATACCCAGGCACATGCCAGCGGCTTACAGCAGG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGTGGGTCTTTGAGTCATaGAAATGGACAACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTWVFES*KWTTFS
Trigger: GCTGAAAGTTGTCCATTTCCATGACTCAAAGACCCA...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTCCCTATCCTGTCTCCTaGCTCTATAGGGAGTTAACA +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIPYPVS*LYRELT
Trigger: TGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGG...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTAAGGTAAGCTGGTGTTaGACCCTAGAAACCCCTATC +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIKVSWC*TLETPI
Trigger: GATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTT...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACATCTCTCATCCTTCATaGGTAGATTCATACTCCAAG +
Preference number: 4 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHISHPS*VDSYSK
Trigger: CTTGGAGTATGAATCTACCCATGAAGGATGAGAGAT...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CAA 72 bp TTCATGGGTAGATTCATACTCCAAGGTAAGCTGGTGTaGGACCCTAGAAACCCCTATCCTGTCTCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: FMGRFILQGKLV*DPRNPYPVSWL
Trigger: GAGCCAGGAGACAGGATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTTGGAGTATGAATCTACCCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATGAAATGAGAGCAGGGTaGTCAATGGTTTCCACGCTA +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYEMRAG*SMVSTL
Trigger: TAGCGTGGAAACCATTGATCACCCTGCTCTCATTTC...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGCCTTGGTCAGCAATTTaGTTTTTGCTTCCAACCGTT +
Preference number: 4 (lower is better)
Translates to: PRNPYPVSWLYRELTALLPWSAI*FLLPTV
Trigger: AACGGTTGGAAGCAAAAATCAAATTGCTGACCAAGG...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATAAAGTCTGGAAAGGGTaGGGTCTACTGTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYKVWKG*GLLSCI
Trigger: AATGCAGGACAGTAGACCTCACCCTTTCCAGACTTT...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATTCAACTCTTCAGTGCTaGTCCCAGAAAATAGCCTCC +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYSTLQC*SQKIAS
Trigger: GGAGGCTATTTTCTGGGATCAGCACTGAAGAGTTGA...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCAGTTGCTGGACACCATaGTGTCTTCTCCTGCCCAGA +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPSCWTP*CLLLPR
Trigger: TCTGGGCAGGAGAAGACATCATGGTGTCCAGCAACT...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATTGGCATCCCAACAACTaGTTGCAGGGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHWHPNN*LQGPAA
Trigger: TGCTGCTGGCCCCTGCAATCAGTTGTTGGGATGCCA...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGCCTTCCCAGCTTTTGTaGAACAAAACAATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTPSQLL*NKTILL
Trigger: TAGGAGAATTGTTTTGTTTCACAAAAGCTGGGAAGG...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTGGAGTGCTGTTTTGCTaGGATATCTTGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIGVLFC*DILLIW
Trigger: CCAAATGAGCAAGATATCGCAGCAAAACAGCACTCC...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTCCTGGAGTGCTGTTTTaGTGCGATATCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIPGVLF*CDILLI
Trigger: AATGAGCAAGATATCGCAGCAAAACAGCACTCCAGG...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCTGGGCGAACTCTTTTTaGTCTGCTTGCTGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPWANSF*SACWEP
Trigger: TGGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCA...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTGCAGTGTGTCTTGTaGTTTCTGCTTGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDLQCVL*FLLAFQ
Trigger: TTGAAAAGCAAGCAGAAAGCACAAGACACACTGCAG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGTCTGCAAGGTTGTGTaGATGCTCAAGAAACAAATC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDVCKVV*MLKKQI
Trigger: GATTTGTTTCTTGAGCATGCACACAACCTTGCAGAC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTCATGATGTCTTCTCCTaGCCAGAAACGGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSHDVFS*PETARS
Trigger: TGACCGTGCCGTTTCTGGGCAGGAGAAGACATCATG...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACAGCGCCTACCATAGGTaGTTGCTTATACATTCAAGT +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDSAYHR*LLIHSS
Trigger: ACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCT...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTAACATTTTTGTTCTCTaGCTAATTGCTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSNIFVL*LIACFC
Trigger: GCAGAAGCAAGCAATTAGGCAGAGAACAAAAATGTT...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACTACTACTTAGTGATCTaGACTGGCATCCCAACAACT +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDYYLVI*TGIPTT
Trigger: AGTTGTTGGGATGCCAGTGCAGATCACTAAGTAGTA...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CAA 72 bp ACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTaGAGTTTTATTCTGGCTACATCATCCCAAGTCCTA +
Preference number: 4 (lower is better)
Translates to: TVSNLPPTGGCN*SFILATSSQVL
Trigger: TAGGACTTGGGATGATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATTTCTCTTCTTTGAGCTaGTTGACTCTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYFSSLS*LTLCSV
Trigger: CACACTGCAGAGAGTCAATCAGCTCAAAGAAGAGAA...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGACAACTTTCAGCCATTaGCATGAGTGGTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRTTFSH*HEWCRW
Trigger: CCACCGACACCACTCATGTCAATGGCTGAAAGTTGT...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTCTGATTTGAAATACTaGGTACACACCCCTGATGCT +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPISDLKY*VHTPDA
Trigger: AGCATCAGGGGTGTGTACTCAGTATTTCAAATCAGA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTCCCGAAGCTCTAAATTaGTTCATTCCCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSPEALN*FIPHTW
Trigger: CCACGTGTGGGGAATGAATCAATTTAGAGCTTCGGG...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATCAGGAAGAGCTGCTCTaGTCTCACCATCCGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHQEELL*SHHPQP
Trigger: TGGCTGCGGATGGTGAGATCAGAGCAGCTCTTCCTG...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGGGACCTGGTCGTGTTTaGTTAAAATCTTACTACTTA +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTGPGRV*LKSYYL
Trigger: TAAGTAGTAAGATTTTAATCAAACACGACCAGGTCC...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCGGCATCAGAAAGCACTaGGTGCAAAATGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCGIRKH*VQNGLF
Trigger: GAACAACCCATTTTGCACTCAGTGCTTTCTGATGCC...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTTGGGCACTCTCCCTTaGCAACACAGAACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSLGTLP*QHRTGR
Trigger: TCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTTGCTGCGATATCTTaGTCATTTGGGCACTCTCCC +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCFAAIS*SFGHSP
Trigger: GGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAA...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATGGAGTGCTGTTTTGCTaGGATATCTTGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYGVLFC*DILLIW
Trigger: CCAAATGAGCAAGATATCGCAGCAAAACAGCACTCC...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCTCTTTTTGCTCTGCTTaGTGGGAGCCACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPSFCSA*WEPQLC
Trigger: GCAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGA...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCTTCCTCTCTCGGCGTTaGCGATACTCGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPFLSRR*RYSSLF
Trigger: AAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAA...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTTCCTCTCTCGGCGTTaGCGATACTCGTCACTGTTT +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSFLSRR*RYSSLF
Trigger: AAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCGTGTCTTGTGCTTTCTaGTTGCTTTTCAACCGGCTC +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCVSCAF*LLFNRL
Trigger: GAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGACAC...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGCAAGGTTGTGTGCATaGTCAAGAAACAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDARLCA*SRNKSL
Trigger: CAAAGATTTGTTTCTTGAGCATGCACACAACCTTGC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGGGACTGTACGTTGTCTaGAAGGTTGTGTGCATGCTC +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRGLYVV*KVVCML
Trigger: GAGCATGCACACAACCTTGCAGACAACGTACAGTCC...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCCCACCAACCGGAGGGTaGAACTTGAGTTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCPPTGG*NLSFIL
Trigger: CAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGG...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTCCTACCATAGGTGCTTaGTTATACATTCAAGTGACC +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIPTIGA*LYIQVT
Trigger: GGTCACTTGAATGTATAAGCAAGCACCTATGGTAGG...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGTTCACACTCATGACCTaGATTTCGGACCTGGTCGTG +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRFTLMT*ISDLVV
Trigger: CACGACCAGGTCCGAAATGCAGGTCATGAGTGTGAA...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTAATTCCGTTCACCCCTaGAGTGCTGTTTTGCTGCGA +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSNSVHP*SAVLLR
Trigger: TCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATCACTGTTTCGATCCATaGGCGAACTCTTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYHCFDP*ANSFCS
Trigger: AGAGCAAAAAGAGTTCGCCCATGGATCGAAACAGTG...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTATATACCTTAACATTTaGGGGATTTTGATTCCCACA +
Preference number: 4 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSIYLNI*GILIPT
Trigger: TGTGGGAATCAAAATCCCCCAAATGTTAAGGTATAT...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGAAAGTCTGGAAAGGGTaGGGTCTACTGTCCTGCATT +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRKVWKG*GLLSCI
Trigger: AATGCAGGACAGTAGACCTCACCCTTTCCAGACTTT...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTCCCAAGTCCTAGTATaGAACAGCAATGTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCSQVLV*NSNVAK
Trigger: TTTGGCCACATTGCTGTTTCATACTAGGACTTGGGA...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR TCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGCTAATAGGAAAGCTTaGACCCATTTTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDANRKA*THFSKS
Trigger: ACTTTTGGAAAAATGGGTTCAAGCTTTCCTATTAGC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCCCGAAGCTCTAAATTaGTTCATTCCCCACACGTGG +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLPEALN*FIPHTW
Trigger: CCACGTGTGGGGAATGAATCAATTTAGAGCTTCGGG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAATGGCATCCCAACAACTaGTTGCAGGGGCCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKWHPNN*LQGPAA
Trigger: TGCTGCTGGCCCCTGCAATCAGTTGTTGGGATGCCA...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTAGAATTTCACACTCATaGCCTGCATTTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSRISHS*PAFRTW
Trigger: CCAGGTCCGAAATGCAGGTCATGAGTGTGAAATTCT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGAGAATTTCACACTCATaGCCTGCATTTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRRISHS*PAFRTW
Trigger: CCAGGTCCGAAATGCAGGTCATGAGTGTGAAATTCT...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGGGGACTGGGAAACGTaGAAAGCTGCTACAATTTCC +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLGDWET*KAATIS
Trigger: GGAAATTGTAGCAGCTTTTCACGTTTCCCAGTCCCC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTGGCATCAGAAAGCACTaGGTGCAAAATGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSGIRKH*VQNGLF
Trigger: GAACAACCCATTTTGCACTCAGTGCTTTCTGATGCC...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCGTTCACCCCTGGAGTaGTGTTTTGCTGCGATATCT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLRSPLE*CFAAIS
Trigger: AGATATCGCAGCAAAACAGCACTCCAGGGGTGAACG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTGCAAGGTTGTGTGCATaGTCAAGAAACAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIARLCA*SRNKSL
Trigger: CAAAGATTTGTTTCTTGAGCATGCACACAACCTTGC...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATACCTTCTGCGCGGCCTaGCAGTTCCCCATTCCTTTT +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHTFCAA*QFPIPF
Trigger: AAAAGGAATGGGGAACTGGCAGGCCGCGCAGAAGGT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCCACCAACCGGAGGGTaGAACTTGAGTTTTATTCTG +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPPPTGG*NLSFIL
Trigger: CAGAATAAAACTCAAGTTGCACCCTCCGGTTGGTGG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTGAAAATAGCCTCCAATaGGTCTTTGAGTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIENSLQ*VFESWK
Trigger: TTTCCATGACTCAAAGACCCATTGGAGGCTATTTTC...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACTATGAAACAGCAATGTaGCCAAAAATGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDYETAM*PKMTMF
Trigger: GAACATGGTCATTTTTGGCCACATTGCTGTTTCATA...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTCCCTATCCTGTCTCCTaGCTCTATAGGGAGTTAACA +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSPYPVS*LYRELT
Trigger: TGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGG...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTAAGGTAAGCTGGTGTTaGACCCTAGAAACCCCTATC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSKVSWC*TLETPI
Trigger: GATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGGTCAATTCATATAACTaGTATAAATTCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTVNSYN*YKFHGS
Trigger: GCTCCCATGGAATTTATACCAGTTATATGAATTGAC...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGAAATGAGAGCAGGGTaGTCAATGGTTTCCACGCTA +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLEMRAG*SMVSTL
Trigger: TAGCGTGGAAACCATTGATCACCCTGCTCTCATTTC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCTTCTCTTCTTTGAGCTaGTTGACTCTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPFSSLS*LTLCSV
Trigger: CACACTGCAGAGAGTCAATCAGCTCAAAGAAGAGAA...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTCCCAAGTCCTAGTATaGAACAGCAATGTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSSQVLV*NSNVAK
Trigger: TTTGGCCACATTGCTGTTTCATACTAGGACTTGGGA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCCGGAGGGTGCAACTTaGGTTTTATTCTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLPEGAT*VLFWLH
Trigger: ATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCAGAATTTCACACTCATaGCCTGCATTTCGGACCTGG +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLRISHS*PAFRTW
Trigger: CCAGGTCCGAAATGCAGGTCATGAGTGTGAAATTCT...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATCCTTCCCAGCTTTTGTaGAACAAAACAATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYPSQLL*NKTILL
Trigger: TAGGAGAATTGTTTTGTTTCACAAAAGCTGGGAAGG...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATTTGGGCACTCTCCCTTaGCAACACAGAACAGGTAGA +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHLGTLP*QHRTGR
Trigger: TCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAA...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTGCATTGTCGCCATCTaGTGTCGTATTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSCIVAI*CRIFSA
Trigger: AGCACTGAAAATACGACAGCAGATGGCGACAATGCA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATTTCACACTCATGACCTaGATTTCGGACCTGGTCGTG +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHFTLMT*ISDLVV
Trigger: CACGACCAGGTCCGAAATGCAGGTCATGAGTGTGAA...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGGGCAGATCTAACAGCTaGAGAATGGACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRGRSNS*RMDFFL
Trigger: AAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCC...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTGCATGTGCCTGGGTATaGATAACACTAATTCCGTTC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSACAWV*ITLIPF
Trigger: GAACGGAATTAGTGTTATCCATACCCAGGCACATGC...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATGAAAATAGCCTCCAATaGGTCTTTGAGTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYENSLQ*VFESWK
Trigger: TTTCCATGACTCAAAGACCCATTGGAGGCTATTTTC...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATAATAAACAGAAGCAGTaGTACAAAGTCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYNKQKQ*YKVWKA
Trigger: GGCTTTCCAGACTTTGTACCACTGCTTCTGTTTATT...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CCA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTATGAAACAGCAATGTaGCCAAAAATGACCATGTTC +
Preference number: 4 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIYETAM*PKMTMF
Trigger: GAACATGGTCATTTTTGGCCACATTGCTGTTTCATA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCTGGGACAGCTTCTCCTaGGCTCCAGTTTTACATTCA +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLWDSFS*APVLHS
Trigger: TGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCA...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGTCAATTCATATAACTaGTATAAATTCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDVNSYN*YKFHGS
Trigger: GCTCCCATGGAATTTATACCAGTTATATGAATTGAC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTCCTTGGTCAGCAATTTaGTTTTTGCTTCCAACCGTT +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSPWSAI*FLLPTV
Trigger: AACGGTTGGAAGCAAAAATCAAATTGCTGACCAAGG...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCCTTGGTCAGCAATTTaGTTTTTGCTTCCAACCGTT +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPPWSAI*FLLPTV
Trigger: AACGGTTGGAAGCAAAAATCAAATTGCTGACCAAGG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCCATGGCAGCTATTTTaGACACAAGAGAAACTACCT +
Preference number: 4 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPPWQLF*TQEKLP
Trigger: AGGTAGTTTCTCTTGTGTTCAAAATAGCTGCCATGG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR GCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGCTTGTGCTTTCTGCTTaGTTTTCAACCGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRLVLSA*FSTGSF
Trigger: AAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAG...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTGTCTGCAAGGTTGTGTaGATGCTCAAGAAACAAATC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSVCKVV*MLKKQI
Trigger: GATTTGTTTCTTGAGCATGCACACAACCTTGCAGAC...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAACATGATGTCTTCTCCTaGCCAGAAACGGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKHDVFS*PETARS
Trigger: TGACCGTGCCGTTTCTGGGCAGGAGAAGACATCATG...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATGATATCTTGCTCATTTaGGCACTCTCCCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHDILLI*ALSLAN
Trigger: GTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATC...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGCATGTGCCTGGGTATaGATAACACTAATTCCGTTC +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLACAWV*ITLIPF
Trigger: GAACGGAATTAGTGTTATCCATACCCAGGCACATGC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCACTGTTTCGATCCATaGGCGAACTCTTTTTGCTCT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLHCFDP*ANSFCS
Trigger: AGAGCAAAAAGAGTTCGCCCATGGATCGAAACAGTG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTGGGTCTTTGAGTCATaGAAATGGACAACTTTCAGC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSWVFES*KWTTFS
Trigger: GCTGAAAGTTGTCCATTTCCATGACTCAAAGACCCA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCGAAAATAGCCTCCAATaGGTCTTTGAGTCATGGAAA +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCENSLQ*VFESWK
Trigger: TTTCCATGACTCAAAGACCCATTGGAGGCTATTTTC...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCATCTCTCATCCTTCATaGGTAGATTCATACTCCAAG +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCISHPS*VDSYSK
Trigger: CTTGGAGTATGAATCTACCCATGAAGGATGAGAGAT...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCCTGTGGGTGTGTCCTaGCTAGTTTTTCAAAACATC +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLPVGVS*LVFQNI
Trigger: GATGTTTTGAAAAACTAGCCAGGACACACCCACAGG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTCCTGCATTTCGGACCTaGTCGTGTTTGATTAAAATC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSPAFRT*SCLIKI
Trigger: GATTTTAATCAAACACGACCAGGTCCGAAATGCAGG...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGCCTGCATTTCGGACCTaGTCGTGTTTGATTAAAATC +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRPAFRT*SCLIKI
Trigger: GATTTTAATCAAACACGACCAGGTCCGAAATGCAGG...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAATTTCAGCCATTGACATaGGTGGTGTCGGTGGTCACA +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKFQPLT*VVSVVT
Trigger: TGTGACCACCGACACCACTCATGTCAATGGCTGAAA...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCGAGATGGCATGGAGTTaGTACATTTCTCTAATAATC +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCEMAWS*YISLII
Trigger: GATTATTAGAGAAATGTATCAACTCCATGCCATCTC...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTCTTGTGTTCTGATTTaGAATACTGAGTACACACCC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSSCVLI*NTEYTP
Trigger: GGGTGTGTACTCAGTATTTCAAATCAGAACACAAGA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCGGACCTGGTCGTGTTTaGTTAAAATCTTACTACTTA +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCGPGRV*LKSYYL
Trigger: TAAGTAGTAAGATTTTAATCAAACACGACCAGGTCC...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAGGGGACTGGGAAACGTaGAAAGCTGCTACAATTTCC +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKGDWET*KAATIS
Trigger: GGAAATTGTAGCAGCTTTTCACGTTTCCCAGTCCCC...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCCTGGAGTGCTGTTTTaGTGCGATATCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHPGVLF*CDILLI
Trigger: AATGAGCAAGATATCGCAGCAAAACAGCACTCCAGG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCTGCAGTGTGTCTTGTaGTTTCTGCTTGCTTTTCAA +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLLQCVL*FLLAFQ
Trigger: TTGAAAAGCAAGCAGAAAGCACAAGACACACTGCAG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCCTACCATAGGTGCTTaGTTATACATTCAAGTGACC +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLPTIGA*LYIQVT
Trigger: GGTCACTTGAATGTATAAGCAAGCACCTATGGTAGG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGATCCCAACAACTGATTaGAGGGGCCAGCAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKIPTTD*RGQQQE
Trigger: TTCCTGCTGCTGGCCCCTGCAATCAGTTGTTGGGAT...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCTACTACTTAGTGATCTaGACTGGCATCCCAACAACT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLYYLVI*TGIPTT
Trigger: AGTTGTTGGGATGCCAGTGCAGATCACTAAGTAGTA...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATCCGCTGGCATGTGCCTaGGTATGGATAACACTAATT +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHPLACA*VWITLI
Trigger: AATTAGTGTTATCCATACCCAGGCACATGCCAGCGG...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATCCCTATCCTGTCTCCTaGCTCTATAGGGAGTTAACA +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHPYPVS*LYRELT
Trigger: TGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGG...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAACCTCCAATGGGTCTTTaGGTCATGGAAATGGACAAC +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKPPMGL*VMEMDN
Trigger: GTTGTCCATTTCCATGACTCAAAGACCCATTGGAGG...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGGCTTATACATTCAAGTaGCCTAATGCATCTCCAATT +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRAYTFK*PNASPI
Trigger: AATTGGAGATGCATTAGGTCACTTGAATGTATAAGC...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTGGACCTGGTCGTGTTTaGTTAAAATCTTACTACTTA +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSGPGRV*LKSYYL
Trigger: TAAGTAGTAAGATTTTAATCAAACACGACCAGGTCC...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATGGAGTGCTGTTTTGCTaGGATATCTTGCTCATTTGG +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHGVLFC*DILLIW
Trigger: CCAAATGAGCAAGATATCGCAGCAAAACAGCACTCC...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATCCTGGAGTGCTGTTTTaGTGCGATATCTTGCTCATT +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHPGVLF*CDILLI
Trigger: AATGAGCAAGATATCGCAGCAAAACAGCACTCCAGG...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGCAAGGTTGTGTGCATaGTCAAGAAACAAATCTTTG +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLARLCA*SRNKSL
Trigger: CAAAGATTTGTTTCTTGAGCATGCACACAACCTTGC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATTGCATTGTCGCCATCTaGTGTCGTATTTTCAGTGCT +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHCIVAI*CRIFSA
Trigger: AGCACTGAAAATACGACAGCAGATGGCGACAATGCA...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATAGCGCCTACCATAGGTaGTTGCTTATACATTCAAGT +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHSAYHR*LLIHSS
Trigger: ACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCT...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTAACATTTTTGTTCTCTaGCTAATTGCTTGCTTCTGC +
Preference number: 4 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSNIFVL*LIACFC
Trigger: GCAGAAGCAAGCAATTAGGCAGAGAACAAAAATGTT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGGAAACGTGAAAAGCTaGTACAATTTCCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLGNVKS*YNFLSF
Trigger: AAAGGAGAGGAAATTGTAGCAGCTTTTCACGTTTCC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATGCATGTGCCTGGGTATaGATAACACTAATTCCGTTC +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHACAWV*ITLIPF
Trigger: GAACGGAATTAGTGTTATCCATACCCAGGCACATGC...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCATATACCTTAACATTTaGGGGATTTTGATTCCCACA +
Preference number: 4 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCIYLNI*GILIPT
Trigger: TGTGGGAATCAAAATCCCCCAAATGTTAAGGTATAT...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCCTGCATTTCGGACCTaGTCGTGTTTGATTAAAATC +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHPAFRT*SCLIKI
Trigger: GATTTTAATCAAACACGACCAGGTCCGAAATGCAGG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGAAATGAGAGCAGGGTaGTCAATGGTTTCCACGCTA +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKEMRAG*SMVSTL
Trigger: TAGCGTGGAAACCATTGATCACCCTGCTCTCATTTC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAATTCTCTTCTTTGAGCTaGTTGACTCTCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKFSSLS*LTLCSV
Trigger: CACACTGCAGAGAGTCAATCAGCTCAAAGAAGAGAA...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGCCGGAGGGTGCAACTTaGGTTTTATTCTGGCTACAT +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKPEGAT*VLFWLH
Trigger: ATGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGG...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGCTTATACATTCAAGTaGCCTAATGCATCTCCAATT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLAYTFK*PNASPI
Trigger: AATTGGAGATGCATTAGGTCACTTGAATGTATAAGC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCGCTAATAGGAAAGCTTaGACCCATTTTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLANRKA*THFSKS
Trigger: ACTTTTGGAAAAATGGGTTCAAGCTTTCCTATTAGC...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAGGCAGATCTAACAGCTaGAGAATGGACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKGRSNS*RMDFFL
Trigger: AAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCC...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGATATCTTGCTCATTTaGGCACTCTCCCTTGCCAAC +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKDILLI*ALSLAN
Trigger: GTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGCCGCTGGCATGTGCCTaGGTATGGATAACACTAATT +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKPLACA*VWITLI
Trigger: AATTAGTGTTATCCATACCCAGGCACATGCCAGCGG...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGGTCAATTCATATAACTaGTATAAATTCCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: SPKASESTECKMGCSGTRVNSYN*YKFHGS
Trigger: GCTCCCATGGAATTTATACCAGTTATATGAATTGAC...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATTCTTGTGTTCTGATTTaGAATACTGAGTACACACCC +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHSCVLI*NTEYTP
Trigger: GGGTGTGTACTCAGTATTTCAAATCAGAACACAAGA...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAATCCCAAGTCCTAGTATaGAACAGCAATGTGATGAAG +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKSQVLV*NSNVMK
Trigger: CTTCATCACATTGCTGTTTCATACTAGGACTTGGGA...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000652630.1
CDS-3UTR GCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAACTTGTGCTTTCTGCTTaGTTTTCAACCGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKLVLSA*FSTGSF
Trigger: AAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAG...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGGCAGATCTAACAGCTaGAGAATGGACTTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKGRSNS*RMDFFL
Trigger: AAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATACTATGCCTGCGAAGTaGTTCATTTCTTCTCTATTC +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHTMPAK*FISSLF
Trigger: GAATAGAGAAGAAATGAAGCACTTCGCAGGCATAGT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR CCA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATAATAAACAGAAGCAGTaGTACAAAGTCTGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHNKQKQ*YKVWKA
Trigger: GGCTTTCCAGACTTTGTACCACTGCTTCTGTTTATT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGCACTGAGTGCAAAATaGGTTGTTCAGGTACAAGGT +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKALSAK*VVQVQG
Trigger: ACCTTGTACCTGAACAACCCATTTTGCACTCAGTGC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CAA 72 bp AGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTaGCTTATACATTCAAGTGACCTAATGCATCTCCAA +
Preference number: 4 (lower is better)
Translates to: RDLNVCSAYHRC*LIHSSDLMHLQ
Trigger: TTGGAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAACCTTCCCAGCTTTTGTaGAACAAAACAATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKPSQLL*NKTILL
Trigger: TAGGAGAATTGTTTTGTTTCACAAAAGCTGGGAAGG...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGCAGTCTTTGAACTTCTaGACAGATTTTCGATCACCG +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKQSLNF*TDFRSP
Trigger: CGGTGATCGAAAATCTGTTCAGAAGTTCAAAGACTG...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR GCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGCTTGTGCTTTCTGCTTaGTTTTCAACCGGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKLVLSA*FSTGSF
Trigger: AAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAG...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR GCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAGGAAACGTGAAAAGCTaGTACAATTTCCTCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKGNVKS*YNFLSF
Trigger: AAAGGAGAGGAAATTGTAGCAGCTTTTCACGTTTCC...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATATATACCTTAACATTTaGGGGATTTTGATTCCCACA +
Preference number: 4 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHIYLNI*GILIPT
Trigger: TGTGGGAATCAAAATCCCCCAAATGTTAAGGTATAT...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CCA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAATCTCTCATCCTTCATaGGTAGATTCATACTCCAAG +
Preference number: 4 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKISHPS*VDSYSK
Trigger: CTTGGAGTATGAATCTACCCATGAAGGATGAGAGAT...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGTCTTGTGTTCTGATTTaGAATACTGAGTACACACCC +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKSCVLI*NTEYTP
Trigger: GGGTGTGTACTCAGTATTTCAAATCAGAACACAAGA...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR TCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGAGATGGCATGGAGTTaGTACATTTCTCTAATAATC +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKEMAWS*YISLII
Trigger: GATTATTAGAGAAATGTATCAACTCCATGCCATCTC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR TCA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGCTAATAGGAAAGCTTaGACCCATTTTTCCAAAAGT +
Preference number: 4 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKANRKA*THFSKS
Trigger: ACTTTTGGAAAAATGGGTTCAAGCTTTCCTATTAGC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
3UTR CAA 72 bp GATGGCATGGAGTTGATACATTTCTCTAATAATCACTaGGTTAAGATCAAATACCAAAATGAGCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: DGMELIHFSNNH*VKIKYQNEPSE
Trigger: TTCTGAAGGCTCATTTTGGTATTTGATCTTAACCAAGTGATTATTAGAGAAATGTATCAACTCCATGCCATC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS GCA 90 bp ACCTCCGCTGGCTGTCGGCCCTGCTCCGCTCCCTCCAACTATGCCTaGGAAGTGCTTCATTTCTTCTCTATTCGACCCGTAGGTGTTGCG +
Preference number: 5 (lower is better)
Translates to: TSAGCRPCSAPSNYA*EVLHFFSIRPVGVA
Trigger: CGCAACACCTACGGGTCGAATAGAGAAGAAATGAAGCACTTCGCAGGCATAGTTGGAGGGAGCGGAGCAGGGCCGACAGCCAGCGGAGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS GCA 90 bp ATGTACCTCCGCTGGCTGTCGGCCCTGCTCCGCTCCCTCCAACTATaGCTGCGAAGTGCTTCATTTCTTCTCTATTCGACCCGTAGGTGT +
Preference number: 5 (lower is better)
Translates to: MYLRWLSALLRSLQL*LRSASFLLYSTRRC
Trigger: ACACCTACGGGTCGAATAGAGAAGAAATGAAGCACTTCGCAGGCATAGTTGGAGGGAGCGGAGCAGGGCCGACAGCCAGCGGAGGTACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS-3UTR CAA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTATGGGCGAACTCTTTTaGCTCTGCTTGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSMGELF*LCLLGA
Trigger: GGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCAT...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACATGGGCGAACTCTTTTaGCTCTGCTTGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHMGELF*LCLLGA
Trigger: GGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCAT...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGGTTCCTCTCTCGGCGTaGCCGATACTCGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTVPLSA*PILVTV
Trigger: AACAGTGACGAGTATCGGCAACGCCGAGAGAGGAAC...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CCA 90 bp TGTTCCTCTCTCGGCGTTGCCGATACTCGTCACTGTTTCGATCCATaGGCGAACTCTTTTTGCTCTGCTTGCTGGGAGCCACAGCTTTGC +
Preference number: 5 (lower is better)
Translates to: CSSLGVADTRHCFDP*ANSFCSACWEPQLC
Trigger: GCAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCATGGATCGAAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTCGATATCTTGCTCATTaGGGCACTCTCCCTTGCCAA +
Preference number: 5 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSRYLAH*GTLPCQ
Trigger: TTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCG...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCTTTTTGCTCTGCTaGCTGGGAGCCACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDLFLLC*LGATAL
Trigger: CAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGAG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTGTTCCTCTCTCGGCGTaGCCGATACTCGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: SAYPLKPRTFCAACQFPIVPLSA*PILVTV
Trigger: AACAGTGACGAGTATCGGCAACGCCGAGAGAGGAAC...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACACGTTGTCTGCAAGGTaGTGTGCATGCTCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHTLSAR*CACSRN
Trigger: GTTTCTTGAGCATGCACACAACCTTGCAGACAACGT...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACCTCTTAAGAATGGCTTaGCTGAGTTGCTGGACACCA +
Preference number: 5 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHLLRMA*LSCWTP
Trigger: TGGTGTCCAGCAACTCAGCAAAGCCATTCTTAAGAG...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GCTGGACCTGCCCACAAGGGCAGATCACATCCTAGTGGTTCACAGGTCACACACTCCCGAAGCTCTAAATaGATTCATTCCCCACACGTG +
Preference number: 5 (lower is better)
Translates to: AGPAHKGRSHPSGSQVTHSRSSK*IHSPHV
Trigger: CACGTGTGGGGAATGAATCAATTTAGAGCTTCGGGA...GTGTGTGACCTGTGAACCACTAGGATGTGATCTGCCCTTGTGGGCAGGTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCGATATCTTGCTCATTaGGGCACTCTCCCTTGCCAA +
Preference number: 5 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDRYLAH*GTLPCQ
Trigger: TTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCG...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGTTTTGCTGCGATATCTaGCTCATTTGGGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTFCCDI*LIWALS
Trigger: GGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAA...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTCTCTTTTTGCTCTGCTaGCTGGGAGCCACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: SAYPLKPRTFCAACQFPILFLLC*LGATAL
Trigger: CAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGAG...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTCTTGTGCTTTCTGCTaGCTTTTCAACCGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSSCAFC*LFNRLF
Trigger: AAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGA...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGCAAGGTAAGCTGGTGTaGGACCCTAGAAACCCCTAT +
Preference number: 5 (lower is better)
Translates to: PRNPYPVSWLYRELTALLQGKLV*DPRNPY
Trigger: ATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTTG...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACCTCACGTCCCGAAGCTCTAAATaGATTCATTCCCCACACGTG +
Preference number: 5 (lower is better)
Translates to: PPGTASPGLQFYIQKDLTSRSSK*IHSPHV
Trigger: CACGTGTGGGGAATGAATCAATTTAGAGCTTCGGGA...CGTGAGGTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CCA 90 bp CCGTTCACCCCTGGAGTGCTGTTTTGCTGCGATATCTTGCTCATTTaGGCACTCTCCCTTGCCAACACAGAACAGGTAGAAATGAGAGCA +
Preference number: 5 (lower is better)
Translates to: PFTPGVLFCCDILLI*ALSLANTEQVEMRA
Trigger: TGCTCTCATTTCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CCA 90 bp GCTGGCATGTGCCTGGGTATGGATAACACTAATTCCGTTCACCCCTaGAGTGCTGTTTTGCTGCGATATCTTGCTCATTTGGGCACTCTC +
Preference number: 5 (lower is better)
Translates to: AGMCLGMDNTNSVHP*SAVLLRYLAHLGTL
Trigger: GAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGTTATCCATACCCAGGCACATGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATCTCTTTTTGCTCTGCTaGCTGGGAGCCACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYLFLLC*LGATAL
Trigger: CAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGAG...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCGTTCCTCTCTCGGCGTaGCCGATACTCGTCACTGTT +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCVPLSA*PILVTV
Trigger: AACAGTGACGAGTATCGGCAACGCCGAGAGAGGAAC...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCCAGAAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTCTCTGCCTAATTGCTaGCTTCTGCTAAACTTTGCA +
Preference number: 5 (lower is better)
Translates to: PRNGTVSNLPPTGGCNLSSLPNC*LLLNFA
Trigger: TGCAAAGTTTAGCAGAAGCAAGCAATTAGGCAGAGA...ACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTTCTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 90 bp TTCAACCGGCTCTTTTTCACAGCCATGTTGTTCCTCTCTCGGCGTTaGCGATACTCGTCACTGTTTCGATCCATGGGCGAACTCTTTTTG +
Preference number: 5 (lower is better)
Translates to: FNRLFFTAMLFLSRR*RYSSLFRSMGELFL
Trigger: CAAAAAGAGTTCGCCCATGGATCGAAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAACAACATGGCTGTGAAAAAGAGCCGGTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATTTTTTCACAGCCATGTaGTTCCTCTCTCGGCGTTGC +
Preference number: 5 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYFFTAM*FLSRRC
Trigger: GCAACGCCGAGAGAGGAACAACATGGCTGTGAAAAA...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 90 bp TGGGTATGGATAACACTAATTCCGTTCACCCCTGGAGTGCTGTTTTaGTGCGATATCTTGCTCATTTGGGCACTCTCCCTTGCCAACACA +
Preference number: 5 (lower is better)
Translates to: WVWITLIPFTPGVLF*CDILLIWALSLANT
Trigger: TGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGTTATCCATACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTCTTGTGCTTTCTGCTaGCTTTTCAACCGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: SAYPLKPRTFCAACQFPISCAFC*LFNRLF
Trigger: AAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCAGCCTATCCATTAAAACCAAGAACCTTCTGCGCGGCCTGCCAGTTCCCCATTTCTCTGCAGTGTGTCTaGTGCTTTCTGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: SAYPLKPRTFCAACQFPISLQCV*CFLLAF
Trigger: AAAAGCAAGCAGAAAGCACAAGACACACTGCAGAGA...AATGGGGAACTGGCAGGCCGCGCAGAAGGTTCTTGGTTTTAATGGATAGGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 90 bp GTATGGATAACACTAATTCCGTTCACCCCTGGAGTGCTGTTTTGCTaGGATATCTTGCTCATTTGGGCACTCTCCCTTGCCAACACAGAA +
Preference number: 5 (lower is better)
Translates to: VWITLIPFTPGVLFC*DILLIWALSLANTE
Trigger: TTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGTTATCCATAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGTTTTTCACAGCCATGTaGTTCCTCTCTCGGCGTTGC +
Preference number: 5 (lower is better)
Translates to: SPKASESTECKMGCSGTRFFTAM*FLSRRC
Trigger: GCAACGCCGAGAGAGGAACAACATGGCTGTGAAAAA...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACAACATTTGGGGGATTTaGATTCCCACAAAAACCTCT +
Preference number: 5 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDNIWGI*IPTKTS
Trigger: AGAGGTTTTTGTGGGAATCAAAATCCCCCAAATGTT...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCCTCTTAAGAATGGCTTaGCTGAGTTGCTGGACACCA +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCLLRMA*LSCWTP
Trigger: TGGTGTCCAGCAACTCAGCAAAGCCATTCTTAAGAG...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCCAAGGTAAGCTGGTGTaGGACCCTAGAAACCCCTAT +
Preference number: 5 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPQGKLV*DPRNPY
Trigger: ATAGGGGTTTCTAGGGTCCAACACCAGCTTACCTTG...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTCCCGAAGCTCTAAATaGATTCATTCCCCACACGTG +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCSRSSK*IHSPHV
Trigger: CACGTGTGGGGAATGAATCAATTTAGAGCTTCGGGA...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS TCA 90 bp CACACCTTTAACATTCAAGCCACAAGCTCTAAAGTCTGGAAAGGGTaGGGTCTACTGTCCTGCATTGTCGCCATCTGCTGTCGTATTTTC +
Preference number: 5 (lower is better)
Translates to: HTFNIQATSSKVWKG*GLLSCIVAICCRIF
Trigger: GAAAATACGACAGCAGATGGCGACAATGCAGGACAGTAGACCTCACCCTTTCCAGACTTTAGAGCTTGTGGCTTGAATGTTAAAGGTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCCGATATCTTGCTCATTaGGGCACTCTCCCTTGCCAA +
Preference number: 5 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLRYLAH*GTLPCQ
Trigger: TTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCG...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGCTAATGGACTGTACGTaGTCTGCAAGGTTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: SPKASESTECKMGCSGTRLMDCT*SARLCA
Trigger: TGCACACAACCTTGCAGACAACGTACAGTCCATTAG...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CCTAGAAACCCCTATCCTGTCTCCTGGCTCTATAGGGAGTTAACAGCCCTCCTGCAAATTACACACTCATaGCTTTCTATAGCTCTACGA +
Preference number: 5 (lower is better)
Translates to: PRNPYPVSWLYRELTALLQITHS*LSIALR
Trigger: TCGTAGAGCTATAGAAAGCAATGAGTGTGTAATTTG...CAGGAGGGCTGTTAACTCCCTATAGAGCCAGGAGACAGGATAGGGGTTTCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCCCCATGGCAGCTATTTaGAACACAAGAGAAACTACC +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCPMAAI*NTRETT
Trigger: GGTAGTTTCTCTTGTGTTCAAAATAGCTGCCATGGG...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CAA 90 bp AACAGCCCTCCTGGGACAGCTTCTCCTGGGCTCCAGTTTTACATTCAGAAGGACGGAGATGGCATGGAGTaGATACATTTCTCTAATAAT +
Preference number: 5 (lower is better)
Translates to: NSPPGTASPGLQFYIQKDGDGME*IHFSNN
Trigger: ATTATTAGAGAAATGTATCAACTCCATGCCATCTCC...GTCCTTCTGAATGTAAAACTGGAGCCCAGGAGAAGCTGTCCCAGGAGGGCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CAA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATTCTCTGCCTAATTGCTaGCTTCTGCTAAACTTTGCA +
Preference number: 5 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYSLPNC*LLLNFA
Trigger: TGCAAAGTTTAGCAGAAGCAAGCAATTAGGCAGAGA...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAATGGGCGAACTCTTTTaGCTCTGCTTGCTGGGAGCC +
Preference number: 5 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKMGELF*LCLLGA
Trigger: GGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCAT...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTTCTCTGCAGTGTGTCTaGTGCTTTCTGCTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSSLQCV*CFLLAF
Trigger: AAAAGCAAGCAGAAAGCACAAGACACACTGCAGAGA...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTCCTTGGTCAGCAATTaGATTTTTGCTTCCAACCGT +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCSLVSN*IFASNR
Trigger: ACGGTTGGAAGCAAAAATCAAATTGCTGACCAAGGA...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCACCCTCATCAGTAGCTaGTGTCATCAAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCTLISS*CHQTVK
Trigger: CTTAACAGTTTGATGACACAAGCTACTGATGAGGGT...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CAA 90 bp TCTCCTAAGGCATCAGAAAGCACTGAGTGCAAAATGGGTTGTTCAGGTACAAGGCCCATGGCAGCTATTTaGAACACAAGAGAAACTACC +
Preference number: 5 (lower is better)
Translates to: SPKASESTECKMGCSGTRPMAAI*NTRETT
Trigger: GGTAGTTTCTCTTGTGTTCAAAATAGCTGCCATGGG...CCTTGTACCTGAACAACCCATTTTGCACTCAGTGCTTTCTGATGCCTTAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CAA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCAATGGCTTTGCTGAGTaGCTGGACACCATGATGTCT +
Preference number: 5 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLNGFAE*LDTMMS
Trigger: AGACATCATGGTGTCCAGCAACTCAGCAAAGCCATT...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TGTAGCGCCTACCATAGGTGCTTGCTTATACATTCAAGTGACCTAATGCATCTCTCTTGTGCTTTCTGCTaGCTTTTCAACCGGCTCTTT +
Preference number: 5 (lower is better)
Translates to: CSAYHRCLLIHSSDLMHLSCAFC*LFNRLF
Trigger: AAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGA...GAGATGCATTAGGTCACTTGAATGTATAAGCAAGCACCTATGGTAGGCGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAGTCTACTGTCCTGCATaGTCGCCATCTGCTGTCGTA +
Preference number: 5 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKVYCPA*SPSAVV
Trigger: TACGACAGCAGATGGCGACAATGCAGGACAGTAGAC...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AAACGGCACGGTCAGCAATCTTCCACCAACCGGAGGGTGCAACTTGAGTTTTATCAAATTACACACTCATaGCTTTCTATAGCTCTACGA +
Preference number: 5 (lower is better)
Translates to: KRHGQQSSTNRRVQLEFYQITHS*LSIALR
Trigger: TCGTAGAGCTATAGAAAGCAATGAGTGTGTAATTTG...ATAAAACTCAAGTTGCACCCTCCGGTTGGTGGAAGATTGCTGACCGTGCCGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp ATTGACATGAGTGGTGTCGGTGGTCACACCTTTAACATTCAAGCCACAAGCTCTACCCTCATCAGTAGCTaGTGTCATCAAACTGTTAAG +
Preference number: 5 (lower is better)
Translates to: IDMSGVGGHTFNIQATSSTLISS*CHQTVK
Trigger: CTTAACAGTTTGATGACACAAGCTACTGATGAGGGT...AGAGCTTGTGGCTTGAATGTTAAAGGTGTGACCACCGACACCACTCATGTCAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS-3UTR CAA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATAATGGCTTTGCTGAGTaGCTGGACACCATGATGTCT +
Preference number: 5 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHNGFAE*LDTMMS
Trigger: AGACATCATGGTGTCCAGCAACTCAGCAAAGCCATT...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATCTCTTAAGAATGGCTTaGCTGAGTTGCTGGACACCA +
Preference number: 5 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHLLRMA*LSCWTP
Trigger: TGGTGTCCAGCAACTCAGCAAAGCCATTCTTAAGAG...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 90 bp TTCATTCTCTTCTTTGAGCTGATTGACTCTCTGCAGTGTGTCTTGTaGTTTCTGCTTGCTTTTCAACCGGCTCTTTTTCACAGCCATGTT +
Preference number: 5 (lower is better)
Translates to: FILFFELIDSLQCVL*FLLAFQPALFHSHV
Trigger: AACATGGCTGTGAAAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGACACACTGCAGAGAGTCAATCAGCTCAAAGAAGAGAATGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 90 bp GCCATCTGCTGTCGTATTTTCAGTGCTAATGGACTGTACGTTGTCTaGAAGGTTGTGTGCATGCTCAAGAAACAAATCTTTGAGTACACT +
Preference number: 5 (lower is better)
Translates to: AICCRIFSANGLYVV*KVVCMLKKQIFEYT
Trigger: AGTGTACTCAAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACAGCAGATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATACGTTGTCTGCAAGGTaGTGTGCATGCTCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHTLSAR*CACSRN
Trigger: GTTTCTTGAGCATGCACACAACCTTGCAGACAACGT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGTCTACTGTCCTGCATaGTCGCCATCTGCTGTCGTA +
Preference number: 5 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKVYCPA*SPSAVV
Trigger: TACGACAGCAGATGGCGACAATGCAGGACAGTAGAC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TACTTTTTCCTGAGAGGCAGATCTAACAGCTGCAGAATGGACTTCTTCCTTCCCAACATTTGGGGGATTTaGATTCCCACAAAAACCTCT +
Preference number: 5 (lower is better)
Translates to: YFFLRGRSNSCRMDFFLPNIWGI*IPTKTS
Trigger: AGAGGTTTTTGTGGGAATCAAAATCCCCCAAATGTT...GGGAAGGAAGAAGTCCATTCTGCAGCTGTTAGATCTGCCTCTCAGGAAAAAGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp GGGAGCATCGAATTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCCAAATTACACACTCATaGCTTTCTATAGCTCTACGA +
Preference number: 5 (lower is better)
Translates to: GSIEFPRDLNVCSAYHRCQITHS*LSIALR
Trigger: TCGTAGAGCTATAGAAAGCAATGAGTGTGTAATTTG...GCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAATTCGATGCTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATACCGGAGGGTGCAACTaGAGTTTTATTCTGGCTACA +
Preference number: 5 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHTGGCN*SFILAT
Trigger: TGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGGT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATGCCTACCATAGGTGCTaGCTTATACATTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHAYHRC*LIHSSD
Trigger: GTCACTTGAATGTATAAGCAAGCACCTATGGTAGGC...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp CGGACCTGGTCGTGTTTGATTAAAATCTTACTACTTAGTGATCTGCACTGGCATTCCTTGGTCAGCAATTaGATTTTTGCTTCCAACCGT +
Preference number: 5 (lower is better)
Translates to: RTWSCLIKILLLSDLHWHSLVSN*IFASNR
Trigger: ACGGTTGGAAGCAAAAATCAAATTGCTGACCAAGGA...ATGCCAGTGCAGATCACTAAGTAGTAAGATTTTAATCAAACACGACCAGGTCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAACGTTGTCTGCAAGGTaGTGTGCATGCTCAAGAAAC +
Preference number: 5 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKTLSAR*CACSRN
Trigger: GTTTCTTGAGCATGCACACAACCTTGCAGACAACGT...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAACTAATGGACTGTACGTaGTCTGCAAGGTTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKLMDCT*SARLCA
Trigger: TGCACACAACCTTGCAGACAACGTACAGTCCATTAG...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAACCGGAGGGTGCAACTaGAGTTTTATTCTGGCTACA +
Preference number: 5 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKTGGCN*SFILAT
Trigger: TGTAGCCAGAATAAAACTCAAGTTGCACCCTCCGGT...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATGCCTACCATAGGTGCTaGCTTATACATTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHAYHRC*LIHSSD
Trigger: GTCACTTGAATGTATAAGCAAGCACCTATGGTAGGC...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS TCA 90 bp AGCAATTTGATTTTTGCTTCCAACCGTTCATTCTCTTCTTTGAGCTaGTTGACTCTCTGCAGTGTGTCTTGTGCTTTCTGCTTGCTTTTC +
Preference number: 5 (lower is better)
Translates to: SNLIFASNRSFSSLS*LTLCSVSCAFCLLF
Trigger: GAAAAGCAAGCAGAAAGCACAAGACACACTGCAGAGAGTCAATCAGCTCAAAGAAGAGAATGAACGGTTGGAAGCAAAAATCAAATTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 90 bp TTTTCAGTGCTAATGGACTGTACGTTGTCTGCAAGGTTGTGTGCATaGTCAAGAAACAAATCTTTGAGTACACTTAATTCCTTGGTCAGC +
Preference number: 5 (lower is better)
Translates to: FSVLMDCTLSARLCA*SRNKSLSTLNSLVS
Trigger: GCTGACCAAGGAATTAAGTGTACTCAAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGTTTTGCTGCGATATCTaGCTCATTTGGGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKFCCDI*LIWALS
Trigger: GGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAA...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGCTAATGGACTGTACGTaGTCTGCAAGGTTGTGTGCA +
Preference number: 5 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKLMDCT*SARLCA
Trigger: TGCACACAACCTTGCAGACAACGTACAGTCCATTAG...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TCACACACAGAACAAAAGTTACAAAAGTCACCTCACAATTCCCGAAGCTCTAAAGCCTACCATAGGTGCTaGCTTATACATTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: SHTEQKLQKSPHNSRSSKAYHRC*LIHSSD
Trigger: GTCACTTGAATGTATAAGCAAGCACCTATGGTAGGC...TTTAGAGCTTCGGGAATTGTGAGGTGACTTTTGTAACTTTTGTTCTGTGTGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp TTCCCAAGAGATTTAAATGTCTGTAGCGCCTACCATAGGTGCTTGCTTATACATAACATTTGGGGGATTTaGATTCCCACAAAAACCTCT +
Preference number: 5 (lower is better)
Translates to: FPRDLNVCSAYHRCLLIHNIWGI*IPTKTS
Trigger: AGAGGTTTTTGTGGGAATCAAAATCCCCCAAATGTT...ATGTATAAGCAAGCACCTATGGTAGGCGCTACAGACATTTAAATCTCTTGGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGTCCTTGGTCAGCAATTaGATTTTTGCTTCCAACCGT +
Preference number: 5 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKSLVSN*IFASNR
Trigger: ACGGTTGGAAGCAAAAATCAAATTGCTGACCAAGGA...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS-3UTR CAA 90 bp AGTTTTTCAAAACATCTCTCATCCTTCATGGGTAGATTCATACTCCAAGGTAAGGGAGATGGCATGGAGTaGATACATTTCTCTAATAAT +
Preference number: 5 (lower is better)
Translates to: SFSKHLSSFMGRFILQGKGDGME*IHFSNN
Trigger: ATTATTAGAGAAATGTATCAACTCCATGCCATCTCC...CTTACCTTGGAGTATGAATCTACCCATGAAGGATGAGAGATGTTTTGAAAAACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000284000.9
ENST00000585933.2
CDS GCA 72 bp CGCTGGCTGTCGGCCCTGCTCCGCTCCCTCCAACTATaGCTGCGAAGTGCTTCATTTCTTCTCTATTCGACC +
Preference number: 6 (lower is better)
Translates to: RWLSALLRSLQL*LRSASFLLYST
Trigger: GGTCGAATAGAGAAGAAATGAAGCACTTCGCAGGCATAGTTGGAGGGAGCGGAGCAGGGCCGACAGCCAGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS GCA 72 bp AAAATCTTCACATGTACCTCCGCTGGCTGTCGGCCCTaGTCCGCTCCCTCCAACTATGCCTGCGAAGTGCTT +
Preference number: 6 (lower is better)
Translates to: KIFTCTSAGCRP*SAPSNYACEVL
Trigger: AAGCACTTCGCAGGCATAGTTGGAGGGAGCGGAGCAGGGCCGACAGCCAGCGGAGGTACATGTGAAGATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS CCA 72 bp GGAACCTGCTGTAAGCCGCTGGCATGTGCCTGGGTATaGATAACACTAATTCCGTTCACCCCTGGAGTGCTG +
Preference number: 6 (lower is better)
Translates to: GTCCKPLACAWV*ITLIPFTPGVL
Trigger: CAGCACTCCAGGGGTGAACGGAATTAGTGTTATCCATACCCAGGCACATGCCAGCGGCTTACAGCAGGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CCA 72 bp CTCGGCGTTGCCGATACTCGTCACTGTTTCGATCCATaGGCGAACTCTTTTTGCTCTGCTTGCTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: LGVADTRHCFDP*ANSFCSACWEP
Trigger: TGGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCATGGATCGAAACAGTGACGAGTATCGGCAACGCCGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 72 bp CGTTCACCCCTGGAGTGCTGTTTTGCTGCGATATCTTaGTCATTTGGGCACTCTCCCTTGCCAACACAGAAC +
Preference number: 6 (lower is better)
Translates to: RSPLECCFAAIS*SFGHSPLPTQN
Trigger: GTTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp CCGTTCACCCCTGGAGTGCTGTTTTGCTGCGATATCTaGCTCATTTGGGCACTCTCCCTTGCCAACACAGAA +
Preference number: 6 (lower is better)
Translates to: PFTPGVLFCCDI*LIWALSLANTE
Trigger: TTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp TACTCGTCACTGTTTCGATCCATGGGCGAACTCTTTTaGCTCTGCTTGCTGGGAGCCACAGCTTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: YSSLFRSMGELF*LCLLGATALPP
Trigger: AGGAGGCAAAGCTGTGGCTCCCAGCAAGCAGAGCAAAAAGAGTTCGCCCATGGATCGAAACAGTGACGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp TCCGTTCACCCCTGGAGTGCTGTTTTGCTGCGATATCTTGCTCATTaGGGCACTCTCCCTTGCCAACACAGAACAGGTAGAAATGAGAGC +
Preference number: 6 (lower is better)
Translates to: SVHPWSAVLLRYLAH*GTLPCQHRTGRNES
Trigger: GCTCTCATTTCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 72 bp ACACTAATTCCGTTCACCCCTGGAGTGCTGTTTTGCTaGGATATCTTGCTCATTTGGGCACTCTCCCTTGCC +
Preference number: 6 (lower is better)
Translates to: TLIPFTPGVLFC*DILLIWALSLA
Trigger: GGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp CCCTGGAGTGCTGTTTTGCTGCGATATCTTGCTCATTaGGGCACTCTCCCTTGCCAACACAGAACAGGTAGA +
Preference number: 6 (lower is better)
Translates to: PWSAVLLRYLAH*GTLPCQHRTGR
Trigger: TCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp TGCTTGCTTTTCAACCGGCTCTTTTTCACAGCCATGTaGTTCCTCTCTCGGCGTTGCCGATACTCGTCACTG +
Preference number: 6 (lower is better)
Translates to: CLLFNRLFFTAM*FLSRRCRYSSL
Trigger: CAGTGACGAGTATCGGCAACGCCGAGAGAGGAACAACATGGCTGTGAAAAAGAGCCGGTTGAAAAGCAAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp CTGGGTATGGATAACACTAATTCCGTTCACCCCTGGAGTGCTGTTTaGCTGCGATATCTTGCTCATTTGGGCACTCTCCCTTGCCAACAC +
Preference number: 6 (lower is better)
Translates to: LGMDNTNSVHPWSAV*LRYLAHLGTLPCQH
Trigger: GTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGTTATCCATACCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp TGTGCTTTCTGCTTGCTTTTCAACCGGCTCTTTTTCACAGCCATGTaGTTCCTCTCTCGGCGTTGCCGATACTCGTCACTGTTTCGATCC +
Preference number: 6 (lower is better)
Translates to: CAFCLLFNRLFFTAM*FLSRRCRYSSLFRS
Trigger: GGATCGAAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAACAACATGGCTGTGAAAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CCA 72 bp CCTGGAGTGCTGTTTTGCTGCGATATCTTGCTCATTTaGGCACTCTCCCTTGCCAACACAGAACAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: PGVLFCCDILLI*ALSLANTEQVE
Trigger: TTCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp ACACTAATTCCGTTCACCCCTGGAGTGCTGTTTTGCTGCGATATCTaGCTCATTTGGGCACTCTCCCTTGCCAACACAGAACAGGTAGAA +
Preference number: 6 (lower is better)
Translates to: TLIPFTPGVLFCCDI*LIWALSLANTEQVE
Trigger: TTCTACCTGTTCTGTGTTGGCAAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp TTTCAACCGGCTCTTTTTCACAGCCATGTTGTTCCTCTCTCGGCGTaGCCGATACTCGTCACTGTTTCGATCCATGGGCGAACTCTTTTT +
Preference number: 6 (lower is better)
Translates to: FQPALFHSHVVPLSA*PILVTVSIHGRTLF
Trigger: AAAAAGAGTTCGCCCATGGATCGAAACAGTGACGAGTATCGGCAACGCCGAGAGAGGAACAACATGGCTGTGAAAAAGAGCCGGTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp CCACAAGCTCTAAAGTCTGGAAAGGGTGAGGTCTACTGTCCTGCATaGTCGCCATCTGCTGTCGTATTTTCAGTGCTAATGGACTGTACG +
Preference number: 6 (lower is better)
Translates to: PQALKSGKGEVYCPA*SPSAVVFSVLMDCT
Trigger: CGTACAGTCCATTAGCACTGAAAATACGACAGCAGATGGCGACAATGCAGGACAGTAGACCTCACCCTTTCCAGACTTTAGAGCTTGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS TCA 72 bp AACATTCAAGCCACAAGCTCTAAAGTCTGGAAAGGGTaGGGTCTACTGTCCTGCATTGTCGCCATCTGCTGT +
Preference number: 6 (lower is better)
Translates to: NIQATSSKVWKG*GLLSCIVAICC
Trigger: ACAGCAGATGGCGACAATGCAGGACAGTAGACCTCACCCTTTCCAGACTTTAGAGCTTGTGGCTTGAATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 72 bp ATAACACTAATTCCGTTCACCCCTGGAGTGCTGTTTTaGTGCGATATCTTGCTCATTTGGGCACTCTCCCTT +
Preference number: 6 (lower is better)
Translates to: ITLIPFTPGVLF*CDILLIWALSL
Trigger: AAGGGAGAGTGCCCAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CCA 72 bp TGCCTGGGTATGGATAACACTAATTCCGTTCACCCCTaGAGTGCTGTTTTGCTGCGATATCTTGCTCATTTG +
Preference number: 6 (lower is better)
Translates to: CLGMDNTNSVHP*SAVLLRYLAHL
Trigger: CAAATGAGCAAGATATCGCAGCAAAACAGCACTCCAGGGGTGAACGGAATTAGTGTTATCCATACCCAGGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp CTAAAGTCTGGAAAGGGTGAGGTCTACTGTCCTGCATaGTCGCCATCTGCTGTCGTATTTTCAGTGCTAATG +
Preference number: 6 (lower is better)
Translates to: LKSGKGEVYCPA*SPSAVVFSVLM
Trigger: CATTAGCACTGAAAATACGACAGCAGATGGCGACAATGCAGGACAGTAGACCTCACCCTTTCCAGACTTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp CCGTTCATTCTCTTCTTTGAGCTGATTGACTCTCTGCAGTGTGTCTaGTGCTTTCTGCTTGCTTTTCAACCGGCTCTTTTTCACAGCCAT +
Preference number: 6 (lower is better)
Translates to: PFILFFELIDSLQCV*CFLLAFQPALFHSH
Trigger: ATGGCTGTGAAAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGACACACTGCAGAGAGTCAATCAGCTCAAAGAAGAGAATGAACGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp CTCTTCTTTGAGCTGATTGACTCTCTGCAGTGTGTCTaGTGCTTTCTGCTTGCTTTTCAACCGGCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: LFFELIDSLQCV*CFLLAFQPALF
Trigger: AAAAAGAGCCGGTTGAAAAGCAAGCAGAAAGCACAAGACACACTGCAGAGAGTCAATCAGCTCAAAGAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp TTGTCGCCATCTGCTGTCGTATTTTCAGTGCTAATGGACTGTACGTaGTCTGCAAGGTTGTGTGCATGCTCAAGAAACAAATCTTTGAGT +
Preference number: 6 (lower is better)
Translates to: LSPSAVVFSVLMDCT*SARLCACSRNKSLS
Trigger: ACTCAAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACAGCAGATGGCGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp TCTGCTGTCGTATTTTCAGTGCTAATGGACTGTACGTaGTCTGCAAGGTTGTGTGCATGCTCAAGAAACAAA +
Preference number: 6 (lower is better)
Translates to: SAVVFSVLMDCT*SARLCACSRNK
Trigger: TTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACAGCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS TCA 72 bp TGCTTTCCCTATTTTATTGATCAGTCTTTGAACTTCTaGACAGATTTTCGATCACCGCAAGCTGAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: CFPYFIDQSLNF*TDFRSPQAEPF
Trigger: GAAGGGCTCAGCTTGCGGTGATCGAAAATCTGTTCAGAAGTTCAAAGACTGATCAATAAAATAGGGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS GCA 72 bp GTTGCGTGTTCTTCTAAACTACGTTCAACAGTAAAGTaGAGGACATTCCAACAGCTCCACAAAGAAGCAAAA +
Preference number: 6 (lower is better)
Translates to: VACSSKLRSTVK*RTFQQLHKEAK
Trigger: TTTTGCTTCTTTGTGGAGCTGTTGGAATGTCCTGCACTTTACTGTTGAACGTAGTTTAGAAGAACACGCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585933.2
CDS CAA 90 bp GCTGTCGTATTTTCAGTGCTAATGGACTGTACGTTGTCTGCAAGGTaGTGTGCATGCTCAAGAAACAAATCTTTGAGTACACTTAATTCC +
Preference number: 6 (lower is better)
Translates to: AVVFSVLMDCTLSAR*CACSRNKSLSTLNS
Trigger: GGAATTAAGTGTACTCAAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS GCA 72 bp TGTCGTATTTTCAGTGCTAATGGACTGTACGTTGTCTaGAAGGTTGTGTGCATGCTCAAGAAACAAATCTTT +
Preference number: 6 (lower is better)
Translates to: CRIFSANGLYVV*KVVCMLKKQIF
Trigger: AAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAATACGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 72 bp TTTTCAGTGCTAATGGACTGTACGTTGTCTGCAAGGTaGTGTGCATGCTCAAGAAACAAATCTTTGAGTACA +
Preference number: 6 (lower is better)
Translates to: FSVLMDCTLSAR*CACSRNKSLST
Trigger: TGTACTCAAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACAGTCCATTAGCACTGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1
CDS CAA 90 bp TGTACGTTGTCTGCAAGGTTGTGTGCATGCTCAAGAAACAAATCTTaGAGTACACTTAATTCCTTGGTCAGCAATTTGATTTTTGCTTCC +
Preference number: 6 (lower is better)
Translates to: CTLSARLCACSRNKS*STLNSLVSNLIFAS
Trigger: GGAAGCAAAAATCAAATTGCTGACCAAGGAATTAAGTGTACTCAAAGATTTGTTTCTTGAGCATGCACACAACCTTGCAGACAACGTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000284000.9
ENST00000585933.2
ENST00000652630.1