Pregenerated sensors for CEBPD (Homo sapiens)
Ensembl gene IDs: ENSG00000221869Ensembl transcript IDs: ENST00000408965.4
Found 49 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTaGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTC | + |
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Preference number: 1 (lower is better) Translates to: CAPMSQETAAGTRRL*LRQGRARSAPGRRV Trigger: GACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCCAGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| 3UTR-3UTR TCA 90 bp | TGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCGGTATGGGTCGTTGCTaGGTCTCTCCCGCCCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: CSFFALLCPKKLQRAPGGGMGRC*VSPAPA Trigger: GGCCGGGGCGGGAGAGACTCAGCAACGACCCATACC...GCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTGTCGGGTCTGAGGTATaGGTCGTTGCTGAGTCTCTC | + |
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Preference number: 2 (lower is better) Translates to: SFFALLCPKKLQRAPGGSVGSEV*VVAESL Trigger: GAGAGACTCAGCAACGACCCATACCTCAGACCCGAC...AGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| 3UTR CCA 72 bp | GGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATaGGTCGTTGCTGAGTCTCTCCCGCCCCGGCCGCGC | + |
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Preference number: 3 (lower is better) Translates to: GRAPLRAVGSEV*VVAESLPPRPR Trigger: GCGCGGCCGGGGCGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| 3UTR GCA 72 bp | GCTGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTaGAGCGGGCACCCGGCGGCTCTGGCTGCGCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: AVASLRSYVPRN*SGHPAALAAPG Trigger: CCCTGGCGCAGCCAGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | GGCTCTGGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGAGTCGGGCTCGCGCTTaGGCAGGCGGGGAGCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GSGCARAGRAPLRAVGSESRARA*AGGERQ Trigger: CTGCCGCTCCCCGCCTGCTCAAGCGCGAGCCCGACT...CTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCCAGAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGGTCCGGGCCCCTCTTaGCGGCGCTCTTCTCCCGGG | + |
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Preference number: 4 (lower is better) Translates to: GSGCARAGRAPLRAVGSEGPGPS*RRSSPG Trigger: CCCGGGAGAAGAGCGCCGGCAAGAGGGGCCCGGACC...CTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCCAGAGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GGCTCTGGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGCGTTACCGGCAGTCTaGTGTCCCGGCGGCCGGCAG | + |
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Preference number: 4 (lower is better) Translates to: GSGCARAGRAPLRAVGSEALPAV*CPGGRQ Trigger: CTGCCGGCCGCCGGGACAGCAGACTGCCGGTAACGC...CTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCCAGAGCC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGCTCACCACGGTCTGTaGGCACGCGGCCACCTGCGC | + |
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Preference number: 4 (lower is better) Translates to: GCARAGRAPLRAVGSEVWAHHGL*ARGHLR Trigger: GCGCAGGTGGCCGCGTGCGCACAGACCGTGGTGAGC...CCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGCGTCGGGCCGGGCTCTaGGTCCAAGCGAGGCTGTCA | + |
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Preference number: 4 (lower is better) Translates to: GCARAGRAPLRAVGSEVWRRAGL*VQARLS Trigger: TGACAGCCTCGCTTGGACGCAGAGCCCGGCCCGACG...CCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCTCTCCCGCCCCGGCCGCGCCGGGGTGGGCTGCCCTaGGGCCGCCAAGCTCACCAC | + |
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Preference number: 4 (lower is better) Translates to: AVGSEVWVVAESLPPRPRRGGLP*GRQAHH Trigger: GTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCG...GCGCGGCCGGGGCGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | CAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCCGGGCCGTCCAGGCTaGAGAGCGCGGCGCTCATGG | + |
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Preference number: 4 (lower is better) Translates to: QGALRSGPSGLRYGSLLSPGRPG*RARRSW Trigger: CCATGAGCGCCGCGCTCTTCAGCCTGGACGGCCCGG...ACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CCA 90 bp | TGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTGGCTGCGCTCTCGTCGTCGTACATaGCGGGGGCGGCGGCGCCTG | + |
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Preference number: 4 (lower is better) Translates to: CAPMSQETAAGTRRLWLRSRRRT*RGRRRL Trigger: CAGGCGCCGCCGCCCCCGCCATGTACGACGACGAGA...GCGCAGCCAGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | GCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCTCTCCCGGGCTGGGCAGCTGCTTaGAGAACTGCCGGAGGCCGG | + |
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Preference number: 4 (lower is better) Translates to: APLRAVGSEVWVVAESLPGWAAA*RTAGGR Trigger: CCGGCCTCCGGCAGTTCTTCAAGCAGCTGCCCAGCC...CGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | GCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCTCTCCCGCCCCGGCCGCGCCCTTGTGATTGCTGTTaGAGAGGTCGGCGAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: AVGSEVWVVAESLPPRPRPCDCC*RGRRRA Trigger: AGCTCTTCGCCGACCTCTTCAACAGCAATCACAAGG...GCGCGGCCGGGGCGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | GTCCAGGCTGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCGGCCAGGTCCCGCGTaGGCTGCTCCACGCGCTGGT | + |
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Preference number: 4 (lower is better) Translates to: VQAVASLRSYVPRNCSGHRPGPA*AAPRAG Trigger: ACCAGCGCGTGGAGCAGCTCACGCGGGACCTGGCCG...GTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACAGCCTGGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | AGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTGGTATGGGTCGTTGCTaGGTCTCTCCCGCCCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: SFFALLCPKKLQRAPGGSGMGRC*VSPAPA Trigger: GGCCGGGGCGGGAGAGACTCAGCAACGACCCATACC...AGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CCA 90 bp | TGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTGGCTGCGCAGCTGCTCCACGCGCTaGTGCAGCTTCTCGTTCTCA | + |
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Preference number: 4 (lower is better) Translates to: CAPMSQETAAGTRRLWLRSCSTR*CSFSFS Trigger: TGAGAACGAGAAGCTGCACCAGCGCGTGGAGCAGCT...GCGCAGCCAGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GTCCAGGCTGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACAGGTCCCGCGTGAGCTaGTCCACGCGCTGGTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VQAVASLRSYVPRNCSGHRSRVS*STRWCS Trigger: GCTGCACCAGCGCGTGGAGCAGCTCACGCGGGACCT...GTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACAGCCTGGAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGCAAATGTACCTTAGCTaGATCAACAGGAGTAAGATG | + |
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Preference number: 4 (lower is better) Translates to: GCARAGRAPLRAVGSEVWQMYLS*INRSKM Trigger: CATCTTACTCCTGTTGATGCAGCTAAGGTACATTTG...CCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | TGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTGCTCCACGCGCTGGTaGAGCTTCTCGTTCTCAGCC | + |
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Preference number: 4 (lower is better) Translates to: CSFFALLCPKKLQRAPGGCSTRW*SFSFSA Trigger: GGCTGAGAACGAGAAGCTGCACCAGCGCGTGGAGCA...GCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GTCCAGGCTGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACGGCGGGCTGGGCAGCTaGTTGAAGAACTGCCGGAGG | + |
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Preference number: 4 (lower is better) Translates to: VQAVASLRSYVPRNCSGHGGLGS*LKNCRR Trigger: CCTCCGGCAGTTCTTCAAGCAGCTGCCCAGCCCGCC...GTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACAGCCTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTTATGTCCCAAGAAACTaGAGCGGGCACCCGGCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SFFALLCPKKLQRAPGGSYVPRN*SGHPAA Trigger: AGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATA...AGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | AGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCTCTTCCACCAACTTCTGCTaGATCTCCTGGTTGCGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SFFALLCPKKLQRAPGGSSTNFC*ISWLRR Trigger: GCGGCGCAACCAGGAGATGCAGCAGAAGTTGGTGGA...AGAGCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CCA 90 bp | TGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGCGGGCACCCGGCGGCGTCGGGTCTGAGGTATaGGTCGTTGCTGAGTCTCTC | + |
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Preference number: 4 (lower is better) Translates to: CSFFALLCPKKLQRAPGGVGSEV*VVAESL Trigger: GAGAGACTCAGCAACGACCCATACCTCAGACCCGAC...GCCGCCGGGTGCCCGCTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | GTGGTAAGTCCAGGCTGTAGCTTCTTTGCGCTCCTATGTCCCAAGAAACTGCAGAGCTGCTTGAAGAACTaGCGGAGGCCGGCCAGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VVSPGCSFFALLCPKKLQSCLKN*RRPARS Trigger: GGACCTGGCCGGCCTCCGGCAGTTCTTCAAGCAGCT...CTGCAGTTTCTTGGGACATAGGAGCGCAAAGAAGCTACAGCCTGGACTTACCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR TCA 90 bp | TTTAGCTTCTCTCGCAGTTTAGTGGTGGTAAGTCCAGGCTGTAGCTTCTTTGCGGCGCCGCCCGCCTTGTaGTTGCTGTTGAAGAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: FSFSRSLVVVSPGCSFFAAPPAL*LLLKRS Trigger: CGACCTCTTCAACAGCAATCACAAGGCGGGCGGCGC...CGCAAAGAAGCTACAGCCTGGACTTACCACCACTAAACTGCGAGAGAAGCTAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR GCA 90 bp | TTTAGCTTCTCTCGCAGTTTAGTGGTGGTAAGTCCAGGCTGTAGCTTCTTTGCGAGCTCCACCAACTTCTaGTGCATCTCCTGGTTGCGC | + |
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Preference number: 4 (lower is better) Translates to: FSFSRSLVVVSPGCSFFASSTNF*CISWLR Trigger: GCGCAACCAGGAGATGCAGCAGAAGTTGGTGGAGCT...CGCAAAGAAGCTACAGCCTGGACTTACCACCACTAAACTGCGAGAGAAGCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 90 bp | CTGGGGCTGCTGCGCGGCGGCTCCGGCGACGTGGGCGGGGTGGGCTaGCCTGCGGCCGCCAAGCTCACCACGGTCTGTGCGCACGCGGCC | + |
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Preference number: 5 (lower is better) Translates to: LGLLRGGSGDVGGVG*PAAAKLTTVCAHAA Trigger: GGCCGCGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCCACGTCGCCGGAGCCGCCGCGCAGCAGCCCCAG 80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 90 bp | GGGCGGGGTGGGCTGCCCTGCGGCCGCCAAGCTCACCACGGTCTGTaGGCACGCGGCCACCTGCGCGGGCAACAGCGAGCCGGGCGCGTC | + |
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Preference number: 5 (lower is better) Translates to: GRGGLPCGRQAHHGL*ARGHLRGQQRAGRV Trigger: GACGCGCCCGGCTCGCTGTTGCCCGCGCAGGTGGCCGCGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 90 bp | GCTGCTGCGCGGCGGCTCCGGCGACGTGGGCGGGGTGGGCTGCCCTaGGGCCGCCAAGCTCACCACGGTCTGTGCGCACGCGGCCACCTG | + |
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Preference number: 5 (lower is better) Translates to: AAARRLRRRGRGGLP*GRQAHHGLCARGHL Trigger: CAGGTGGCCGCGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCCACGTCGCCGGAGCCGCCGCGCAGCAGC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 90 bp | CCTGCGGCCGCCAAGCTCACCACGGTCTGTGCGCACGCGGCCACCTaGGCGGGCAACAGCGAGCCGGGCGCGTCGCCGTCGCCCCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: PAAAKLTTVCAHAAT*AGNSEPGASPSPQS Trigger: CGACTGGGGCGACGGCGACGCGCCCGGCTCGCTGTTGCCCGCGCAGGTGGCCGCGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS CCA 90 bp | TCTGCCTGGGGCTGCTGCGCGGCGGCTCCGGCGACGTGGGCGGGGTaGGCTGCCCTGCGGCCGCCAAGCTCACCACGGTCTGTGCGCACG | + |
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Preference number: 5 (lower is better) Translates to: SAWGCCAAAPATWAG*AALRPPSSPRSVRT Trigger: CGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCCACGTCGCCGGAGCCGCCGCGCAGCAGCCCCAGGCAGA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS CCA 90 bp | GCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATaGGTCGTTGCTGAGTCTCTCCCGCCCCGGCCGCGCGTTACCGGC | + |
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Preference number: 5 (lower is better) Translates to: ARAGRAPLRAVGSEV*VVAESLPPRPRVTG Trigger: GCCGGTAACGCGCGGCCGGGGCGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 90 bp | CAGTCTGCTGTCCCGGCGGCCGGCAGGAAGGGCGGGCTGGGCAGCTaGTTGAAGAACTGCCGGAGGCCGGCCAGGTCCCGCGTGAGCTGC | + |
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Preference number: 5 (lower is better) Translates to: QSAVPAAGRKGGLGS*LKNCRRPARSRVSC Trigger: GCAGCTCACGCGGGACCTGGCCGGCCTCCGGCAGTTCTTCAAGCAGCTGCCCAGCCCGCCCTTCCTGCCGGCCGCCGGGACAGCAGACTG 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CAA 90 bp | CAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCGGTCCGGGCCCCTCTaGCCGGCGCTCTTCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: QGALRSGPSGLRYGSLLSRSGPL*PALFSR Trigger: CCGGGAGAAGAGCGCCGGCAAGAGGGGCCCGGACCG...ACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CAA 90 bp | GCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCTCTCCCGGGGCTGGGCAGCTGCTaGAAGAACTGCCGGAGGCCG | + |
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Preference number: 5 (lower is better) Translates to: APLRAVGSEVWVVAESLPGLGSC*KNCRRP Trigger: CGGCCTCCGGCAGTTCTTCAAGCAGCTGCCCAGCCC...CGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CAA 90 bp | GGCTCTGGCTGCGCCAGGGCAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGCAGGCTGTAGCTTCTTaGCGCTCCTATGTCCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: GSGCARAGRAPLRAVGSEQAVAS*RSYVPR Trigger: TCTTGGGACATAGGAGCGCAAAGAAGCTACAGCCTG...CTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTGCCCTGGCGCAGCCAGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS TCA 90 bp | GAAGAAGCTCCAGGGGCCCCGCGCCGCCCGCCTTGTGATTGCTGTTaGAGAGGTCGGCGAAGAGCTCGTCGTGGCACAGCTCCAGGGTGG | + |
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Preference number: 5 (lower is better) Translates to: EEAPGAPRRPPCDCC*RGRRRARRGTAPGW Trigger: CCACCCTGGAGCTGTGCCACGACGAGCTCTTCGCCGACCTCTTCAACAGCAATCACAAGGCGGGCGGCGCGGGGCCCCTGGAGCTTCTTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CAA 90 bp | GCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTTGCTGAGTCTCTCCCGCTGAGGTATGGGTCGTaGCTGAGTCTCTCCCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: APLRAVGSEVWVVAESLPLRYGS*LSLSRP Trigger: GGGGCGGGAGAGACTCAGCAACGACCCATACCTCAG...CGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS-3UTR CAA 90 bp | TCTCGCAGTTTAGTGGTGGTAAGTCCAGGCTGTAGCTTCTTTGCGCTCCTATGTCAGTCGGGCTCGCGCTaGAGCAGGCGGGGAGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: SRSLVVVSPGCSFFALLCQSGSR*SRRGAA Trigger: TGCCGCTCCCCGCCTGCTCAAGCGCGAGCCCGACTG...ACATAGGAGCGCAAAGAAGCTACAGCCTGGACTTACCACCACTAAACTGCGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 72 bp | CGGCGGCTCCGGCGACGTGGGCGGGGTGGGCTGCCCTaGGGCCGCCAAGCTCACCACGGTCTGTGCGCACGC | + |
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Preference number: 6 (lower is better) Translates to: RRLRRRGRGGLP*GRQAHHGLCAR Trigger: GCGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCCACGTCGCCGGAGCCGCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 72 bp | CTGCGCGGCGGCTCCGGCGACGTGGGCGGGGTGGGCTaGCCTGCGGCCGCCAAGCTCACCACGGTCTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: LRGGSGDVGGVG*PAAAKLTTVCA Trigger: CGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCCACGTCGCCGGAGCCGCCGCGCAG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS CCA 72 bp | GGCTGCTGCGCGGCGGCTCCGGCGACGTGGGCGGGGTaGGCTGCCCTGCGGCCGCCAAGCTCACCACGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GCCAAAPATWAG*AALRPPSSPRS Trigger: AGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCCACCCCGCCCACGTCGCCGGAGCCGCCGCGCAGCAGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 72 bp | GCCAAGCTCACCACGGTCTGTGCGCACGCGGCCACCTaGGCGGGCAACAGCGAGCCGGGCGCGTCGCCGTCG | + |
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Preference number: 6 (lower is better) Translates to: AKLTTVCAHAAT*AGNSEPGASPS Trigger: CGACGGCGACGCGCCCGGCTCGCTGTTGCCCGCGCAGGTGGCCGCGTGCGCACAGACCGTGGTGAGCTTGGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS GCA 72 bp | GGGCTGCCCTGCGGCCGCCAAGCTCACCACGGTCTGTaGGCACGCGGCCACCTGCGCGGGCAACAGCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: GLPCGRQAHHGL*ARGHLRGQQRA Trigger: GGCTCGCTGTTGCCCGCGCAGGTGGCCGCGTGCGCACAGACCGTGGTGAGCTTGGCGGCCGCAGGGCAGCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS CAA 90 bp | CAGGGCGCGCTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTaGCTGAGTCTCTCCCGCCCCGGCCGCGCGTTACCGGCAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: QGALRSGPSGLRYGS*LSLSRPGRALPAVC Trigger: GCAGACTGCCGGTAACGCGCGGCCGGGGCGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAGCGCGCCCTG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS CAA 72 bp | CTCCGCTCCGGGCCGTCGGGTCTGAGGTATGGGTCGTaGCTGAGTCTCTCCCGCCCCGGCCGCGCGTTACCG | + |
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Preference number: 6 (lower is better) Translates to: LRSGPSGLRYGS*LSLSRPGRALP Trigger: CGGTAACGCGCGGCCGGGGCGGGAGAGACTCAGCAACGACCCATACCTCAGACCCGACGGCCCGGAGCGGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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| CDS TCA 72 bp | CCAGGGGCCCCGCGCCGCCCGCCTTGTGATTGCTGTTaGAGAGGTCGGCGAAGAGCTCGTCGTGGCACAGCT | + |
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Preference number: 6 (lower is better) Translates to: PGAPRRPPCDCC*RGRRRARRGTA Trigger: AGCTGTGCCACGACGAGCTCTTCGCCGACCTCTTCAACAGCAATCACAAGGCGGGCGGCGCGGGGCCCCTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408965.4 |
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