Pregenerated sensors for CEBPB (Homo sapiens)
Ensembl gene IDs: ENSG00000172216Ensembl transcript IDs: ENST00000303004.5
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTaGCAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTT | + |
|
Preference number: 1 (lower is better) Translates to: NKPVGTSLSDYSGPG*QLHVGCVSPVYTRV Trigger: AACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR GCA 90 bp | ATAGACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTaGATGTGCGGTTGGTTTGGACAAAAATATAGATATATATATATA | + |
|
Preference number: 1 (lower is better) Translates to: IDVSSLNNTTGGSPI*MCGWFGQKYRYIYI Trigger: TATATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR GCA 90 bp | GTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTGCATGTaGGGTTGGTTTGGACAAAAATATAGATATATATATATAATAAAA | + |
|
Preference number: 1 (lower is better) Translates to: VSSLNNTTGGSPICM*GWFGQKYRYIYIIK Trigger: TTTTATTATATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAAC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR GCA 90 bp | CGGCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCCCCCGCGCTGCCAAGTaGCCCAGTGCCAAAGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: RLTVTRGLRQSRVHTRSAPRAAK*PSAKVL Trigger: CAAAACTTTGGCACTGGGGCACTTGGCAGCGCGGGG...GGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR GCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTACGGGCTCCCCGCGCTaGCAAGTGCCCCAGTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: RGLRQSRVHTRSAMFKPITGSPR*QVPQCQ Trigger: TTGGCACTGGGGCACTTGGCAGCGCGGGGAGCCCGT...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR GCA 90 bp | GACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTGCATGTGCGGTTGCCAAGTGCCCCAGTaGCAAAGTTTTGCCGGCGCC | + |
|
Preference number: 2 (lower is better) Translates to: DVSSLNNTTGGSPICMCGCQVPQ*QSFAGA Trigger: GGCGCCGGCAAAACTTTGGCACTGGGGCACTTGGCA...ACCGCACATGCAGATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR CAA 90 bp | ATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTaGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCG | + |
|
Preference number: 2 (lower is better) Translates to: IFKRLLRARLTVTRG*RQSRVHTRSAMFKP Trigger: CGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR CCA 90 bp | CAAAACATCAACAGCAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGATCTGCATGTGCGGTTaGTTTGGACAAAAATATAGA | + |
|
Preference number: 2 (lower is better) Translates to: QNINSNKPVGTSLSDYSGICMCG*FGQKYR Trigger: TCTATATTTTTGTCCAAACCAACCGCACATGCAGAT...CCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTGCTGTTGATGTTTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR CAA 90 bp | TCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTGCATCAACTTCGAAACCCAGTGCCAAAGTTTaGCCGGCGCCGCCGGGGGCG | + |
|
Preference number: 3 (lower is better) Translates to: SRVHTRSAMFKPIASTSKPSAKV*PAPPGA Trigger: CGCCCCCGGCGGCGCCGGCAAAACTTTGGCACTGGG...TTTCGAAGTTGATGCAATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR TCA 72 bp | GTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTaGCAGTTACACGTGGGTTGCGTCAGTCCCGTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: VGTSLSDYSGPG*QLHVGCVSPVY Trigger: GTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR CAA 90 bp | CAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTCCATGTTTAAACCGATaGCATCAACTTCGAAACCGG | + |
|
Preference number: 3 (lower is better) Translates to: QQARRNIFKRLLRARLTVPCLNR*HQLRNR Trigger: CCGGTTTCGAAGTTGATGCAATCGGTTTAAACATGG...AACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR CAA 90 bp | CAAAACATCAACAGCAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGACAGTTACACGTGGGTaGCGTCAGTCCCGTGTACAC | + |
|
Preference number: 3 (lower is better) Translates to: QNINSNKPVGTSLSDYSGTVTRG*RQSRVH Trigger: GTGTACACGGGACTGACGCAACCCACGTGTAACTGT...CCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTGCTGTTGATGTTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTGCATGTGCGGTTGGTTaGGACAAAAATATAGATATA | + |
|
Preference number: 3 (lower is better) Translates to: TVTRGLRQSRVHTRSAMFACAVG*DKNIDI Trigger: TATATCTATATTTTTGTCCAAACCAACCGCACATGC...AAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR GCA 72 bp | TCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTaGATGTGCGGTTGGTTTGGACAAAAATATAGATAT | + |
|
Preference number: 3 (lower is better) Translates to: SSLNNTTGGSPI*MCGWFGQKYRY Trigger: ATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR GCA 72 bp | TTAAATAACACCACGGGCGGGAGCCCCATCTGCATGTaGGGTTGGTTTGGACAAAAATATAGATATATATAT | + |
|
Preference number: 3 (lower is better) Translates to: LNNTTGGSPICM*GWFGQKYRYIY Trigger: ATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCTCCCGCCCGTGGTGTTATTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGGCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCCTGCGTCGCTGCTGCTaGTGCCGCCGCTGCCGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: RLTVTRGLRQSRVHTRSALRRCC*CRRCRG Trigger: ACCCCGGCAGCGGCGGCAGCAGCAGCAGCGACGCAG...GGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCGGCTGGACCCTCGGGTaGGTCCCCTTCCCAGTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RLTVTRGLRQSRVHTRSAGWTLG*VPFPVP Trigger: CGGGACTGGGAAGGGGACCCACCCGAGGGTCCAGCC...GGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGGCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCCAGGCCACCAGGCGTTaGATGAACGCGGGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RLTVTRGLRQSRVHTRSAQATRR*MNAGAR Trigger: CCGGGCACCCGCGTTCATGCAACGCCTGGTGGCCTG...GGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTCAGTCCGAGGGGGCTGGTGGCTaGACCCTCGGGTGGGTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FKRLLRARLTVTRGLRQSEGAGG*TLGWVP Trigger: GGGGACCCACCCGAGGGTCCAGCCACCAGCCCCCTC...GGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | ACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTGCGGCCTCCCTGCTCTaGGCTGTCGCCGCTGCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TVTRGLRQSRVHTRSAMFAASLL*AVAAAS Trigger: CGACGCAGCGGCGACAGCTCAGAGCAGGGAGGCCGC...AAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | CGGCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCGCTCGTTCTCGGCCGTaGGCTCCAGGACCTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RLTVTRGLRQSRVHTRSAARSRP*APGPCA Trigger: AGCACAAGGTCCTGGAGCTCACGGCCGAGAACGAGC...GGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | GCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATCGGCAGGGGGAGACATaGTGGGTCCCAGGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ADSYTWVASVPCTHAFSHRQGET*WVPGHQ Trigger: CTGGTGGCCTGGGACCCAGCATGTCTCCCCCTGCCG...ATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | ACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTGCTCGTGGTCGCCGATaGTGCCCAGCTCGCCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: TVTRGLRQSRVHTRSAMFARGRR*CPARRR Trigger: CCGCCGGCGAGCTGGGCAGCATCGGCGACCACGAGC...AAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | GCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATCAGGGGGAGACATGCTaGGTCCCAGGCCACCAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ADSYTWVASVPCTHAFSHQGETC*VPGHQA Trigger: CGCCTGGTGGCCTGGGACCCAGCATGTCTCCCCCTG...ATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTCCACCAGGCGTTGCATaGACGCGGGTGCCCGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGLRQSRVHTRSAMFKPIPPGVA*TRVPGE Trigger: CTCCCCGGGCACCCGCGTTCATGCAACGCCTGGTGG...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGAGAGGCTCCCGCTGCTaGCGCTCGGCACCGCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRNIFKRLLRARLTVTRGRGSRC*RSAPPG Trigger: ACCAGGCGGTGCCGAGCGGCAGCAGCGGGAGCCTCT...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR CAA 72 bp | CCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATaGCATCAACTTCGAAACCGGCCCGCCCGCCGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PVYTRVQPCLNR*HQLRNRPARRR Trigger: GCGCCGGCGGGCGGGCCGGTTTCGAAGTTGATGCAATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTCTTGGCCTTGCTCTTaGCCTGCGAGGGCGCCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RRNIFKRLLRARLTVTRGSWPCS*PARAPA Trigger: CGCCGGCGCCCTCGCAGGTCAAGAGCAAGGCCAAGA...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | AACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTCCGCCGCTGCCGGGGTaGCCGCTATTAGTGAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NIFKRLLRARLTVTRGLRPPLPG*PLLVRG Trigger: CCCCCTCACTAATAGCGGCCACCCCGGCAGCGGCGG...ACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| 3UTR CAA 72 bp | CGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTaGCGTCAGTCCCGTGTACACACGCGTTCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RLLRARLTVTRG*RQSRVHTRSAM Trigger: CATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | TCTGTACACATAGACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCCCGCCCGCCGGCGCCTaGAGAGGGGCAGAGGGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVHIDVSSLNNTTGGSPIPPAGA*RGAEGE Trigger: TTCTCCCTCTGCCCCTCTCCAGGCGCCGGCGGGCGG...GATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTCTATGTGTACAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | CGGCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCGCTGACAGTTACACGTaGGTTGCGTCAGTCCCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLTVTRGLRQSRVHTRSAADSYT*VASVPC Trigger: ACACGGGACTGACGCAACCCACGTGTAACTGTCAGC...GGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGCCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | AACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTGCTCCAGGTACGGGCTaGAGTCGATGGCGCGCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: NIFKRLLRARLTVTRGLRAPGTG*SRWRAR Trigger: ACGAGCGCGCCATCGACTTCAGCCCGTACCTGGAGC...ACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | AACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTAGTTCCGCAGGGTGCTaGGCTCGCGCGACAGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: NIFKRLLRARLTVTRGLRSSAGC*ARATAA Trigger: AGCAGCTGTCGCGCGAGCTCAGCACCCTGCGGAACT...ACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGGCTCGGGCAGCTGCTTaGACAAGTTCCGCAGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRNIFKRLLRARLTVTRGARAAA*TSSAGC Trigger: GCACCCTGCGGAACTTGTTCAAGCAGCTGCCCGAGC...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | AACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTCCTCCTCCTTCCGCTTaGAGTCCGCGGGCTCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIFKRLLRARLTVTRGLRPPPSA*SPRARS Trigger: GCTTCGAGCCCGCGGACTGCAAGCGGAAGGAGGAGG...ACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | TCTGTACACATAGACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTGGAGAGGCTCCCGCTaGTGCCGCTCGGCACCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVHIDVSSLNNTTGGSPIWRGSR*CRSAPP Trigger: AGGCGGTGCCGAGCGGCAGCAGCGGGAGCCTCTCCA...GATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTCTATGTGTACAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | CAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTTCGGAGAGGAAGTCGTaGTGCTGCCCGGAGGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: QQARRNIFKRLLRARLTVSERKS*CCPEEA Trigger: CGCCTCCTCCGGGCAGCACCACGACTTCCTCTCCGA...AACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | TCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTGCATCAACTTCGAAAAGGAAGTCGTGGTGCTaGCCGGAGGAGGCGGGCGCG | + |
|
Preference number: 4 (lower is better) Translates to: SRVHTRSAMFKPIASTSKRKSWC*PEEAGA Trigger: CGCGCCCGCCTCCTCCGGGCAGCACCACGACTTCCT...TTTCGAAGTTGATGCAATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | TTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTCAGTCCACTCGGCCGGCTTCTTaGAGTTCTTGCCCCCGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: FKRLLRARLTVTRGLRQSTRPAS*SSCPRS Trigger: ACTACGGGGGCAAGAACTGCAAGAAGCCGGCCGAGT...GGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTGCTCCACCTTCTTCTaGAGCCGCTCGTTCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RRNIFKRLLRARLTVTRGCSTFF*SRSFSA Trigger: GGCCGAGAACGAGCGGCTGCAGAAGAAGGTGGAGCA...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTAGCTCGCGCGACAGCTaGTCCACCTTCTTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGLRQSRVHTRSAMFKPISSRDS*STFFCS Trigger: GCTGCAGAAGAAGGTGGAGCAGCTGTCGCGCGAGCT...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTAGGGGCTCGGGCAGCTaGTTGAACAAGTTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RGLRQSRVHTRSAMFKPIRGSGS*LNKFRR Trigger: CCTGCGGAACTTGTTCAAGCAGCTGCCCGAGCCCCT...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTCCCCGCGCTGCCAAGTaGCCCAGTGCCAAAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLRQSRVHTRSAMFKPIPRAAK*PSAKVL Trigger: CAAAACTTTGGCACTGGGGCACTTGGCAGCGCGGGG...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | TCTGTACACATAGACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCACGGGCTCCCCGCGCTaGCAAGTGCCCCAGTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SVHIDVSSLNNTTGGSPITGSPR*QVPQCQ Trigger: TTGGCACTGGGGCACTTGGCAGCGCGGGGAGCCCGT...GATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTCTATGTGTACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGGGCGGGAGCCCCATCTaGATGTGCGGTTGGTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RRNIFKRLLRARLTVTRGGGSPI*MCGWFG Trigger: TCCAAACCAACCGCACATGCAGATGGGGCTCCCGCC...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTGCATCAACTTCGAAATCGATGGCGCGCTCGTaGTCGCCGATGCTGCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRVHTRSAMFKPIASTSKSMARS*SPMLPS Trigger: GCTGGGCAGCATCGGCGACCACGAGCGCGCCATCGA...TTTCGAAGTTGATGCAATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | GCGGGAGCCCCATCTGCATGTGCGGTTGGTTTGGACAAAAATATAGATATATATGCGTGCCGGGCGGGCTaGACGAGGAGGACGTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGAPSACAVGLDKNIDIYACRAG*TRRTWR Trigger: TCTCCACGTCCTCCTCGTCCAGCCCGCCCGGCACGC...ATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCTCCCGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CAAAACATCAACAGCAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGGAGAGGAAGTCGTGGTaGTGCCCGGAGGAGGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QNINSNKPVGTSLSDYSGERKSW*CPEEAG Trigger: GCCCGCCTCCTCCGGGCAGCACCACGACTTCCTCTC...CCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTGCTGTTGATGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | CAAAACATCAACAGCAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGTGGACGAGGAGGACGTaGAGAGGCTCCCGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: QNINSNKPVGTSLSDYSGWTRRT*RGSRCC Trigger: GCAGCAGCGGGAGCCTCTCCACGTCCTCCTCGTCCA...CCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTGCTGTTGATGTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTTTGTACTCGTCGCTGTaGTTGTCCACGGTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLRQSRVHTRSAMFKPILYSSL*LSTVFL Trigger: CAAGAAGACCGTGGACAAGCACAGCGACGAGTACAA...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | GCGGGAGCCCCATCTGCATGTGCGGTTGGTTTGGACAAAAATATAGATATATATTACTCAGGGCCCGGCTaGCAGTTACACGTGGGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGAPSACAVGLDKNIDIYYSGPG*QLHVGC Trigger: GCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTA...ATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCTCCCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR TCA 90 bp | CGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGTTTAAACCGATTAGTGTTCTTAATGCTTaGAACGGAAAAGATTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: RGLRQSRVHTRSAMFKPISVLNA*NGKDSQ Trigger: TTGGGAATCTTTTCCGTTTCAAGCATTAAGAACACT...AATCGGTTTAAACATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CCA 90 bp | GACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTGCATGTGCGGTATCTGCATGTGCGGTTaGTTTGGACAAAAATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: DVSSLNNTTGGSPICMCGICMCG*FGQKYR Trigger: TCTATATTTTTGTCCAAACCAACCGCACATGCAGAT...ACCGCACATGCAGATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | CAAAACATCAACAGCAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGAGCCCCATCTGCATGTaGGGTTGGTTTGGACAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QNINSNKPVGTSLSDYSGSPICM*GWFGQK Trigger: TTTTTGTCCAAACCAACCGCACATGCAGATGGGGCT...CCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTGCTGTTGATGTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | AGCCCCATCTGCATGTGCGGTTGGTTTGGACAAAAATATAGATATATATATATATCCAGGACCTTGTGCTaGGTCTCCAGGTTGCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: SPICMCGWFGQKYRYIYISRTLC*VSRLRI Trigger: GATGCGCAACCTGGAGACGCAGCACAAGGTCCTGGA...TATATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | AGCCCCATCTGCATGTGCGGTTGGTTTGGACAAAAATATAGATATATATATATAGCTTCTTGCAGTTCTTaGCCCCGTAGTCGTCGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPICMCGWFGQKYRYIYIASCSS*PRSRRR Trigger: TCTCCGACGACTACGGGGGCAAGAACTGCAAGAAGC...TATATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR GCA 90 bp | AGCCCCATCTGCATGTGCGGTTGGTTTGGACAAAAATATAGATATATATATATACAGTTACACGTGGGTTaGGTCAGTCCCGTGTACACA | + |
|
Preference number: 4 (lower is better) Translates to: SPICMCGWFGQKYRYIYIQLHVG*VSPVYT Trigger: TGTGTACACGGGACTGACGCAACCCACGTGTAACTG...TATATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS TCA 90 bp | CCTCCTTCCGCTTGCAGTCCGCGGGCTCGAAGCCCGGCTCCGCCTTaGGCTCGGCGGGCGGCGGCGGCGGCGGGGGCGGTGGGTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PPSACSPRARSPAPP*ARRAAAAAGAVGAG Trigger: CCCTGCACCCACCGCCCCCGCCGCCGCCGCCGCCCGCCGAGCTCAAGGCGGAGCCGGGCTTCGAGCCCGCGGACTGCAAGCGGAAGGAGG 80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CCA 90 bp | CGTCAGCGGGGCTCGGCGTGCCGGGCGGGCTGGACGAGGAGGACGTaGAGAGGCTCCCGCTGCTGCCGCTCGGCACCGCCTGGTAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: RQRGSACRAGWTRRT*RGSRCCRSAPPGSR Trigger: TCGGCTACCAGGCGGTGCCGAGCGGCAGCAGCGGGAGCCTCTCCACGTCCTCCTCGTCCAGCCCGCCCGGCACGCCGAGCCCCGCTGACG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS GCA 90 bp | GCGTGCCGGGCGGGCTGGACGAGGAGGACGTGGAGAGGCTCCCGCTaGTGCCGCTCGGCACCGCCTGGTAGCCGAGGTAAGCGCGCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: ACRAGWTRRTWRGSR*CRSAPPGSRGKRAA Trigger: CGCTGCGCGCTTACCTCGGCTACCAGGCGGTGCCGAGCGGCAGCAGCGGGAGCCTCTCCACGTCCTCCTCGTCCAGCCCGCCCGGCACGC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CCA 90 bp | GCTGTCGCCGCTGCGTCGCTGCTGCTGCTGCCGCCGCTGCCGGGGTaGCCGCTATTAGTGAGGGGGCTGGTGGCTGGACCCTCGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: AVAAASLLLLPPLPG*PLLVRGLVAGPSGG Trigger: CCCACCCGAGGGTCCAGCCACCAGCCCCCTCACTAATAGCGGCCACCCCGGCAGCGGCGGCAGCAGCAGCAGCGACGCAGCGGCGACAGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS GCA 90 bp | GCCCCAGGCTCACGTAGCCGTACTCGGCCGGCTTCTTGCAGTTCTTaGCCCCGTAGTCGTCGGAGAAGAGGTCGGAGAGGAAGTCGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: APGSRSRTRPASCSS*PRSRRRRGRRGSRG Trigger: ACCACGACTTCCTCTCCGACCTCTTCTCCGACGACTACGGGGGCAAGAACTGCAAGAAGCCGGCCGAGTACGGCTACGTGAGCCTGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATCCAGGCCACCAGGCGTaGCATGAACGCGGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: ADSYTWVASVPCTHAFSHPGHQA*HERGCP Trigger: CGGGCACCCGCGTTCATGCAACGCCTGGTGGCCTGG...ATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGCCCAGTGCCAAAGTTTaGCCGGCGCCGCCGGGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: RRNIFKRLLRARLTVTRGPSAKV*PAPPGA Trigger: CGCCCCCGGCGGCGCCGGCAAAACTTTGGCACTGGG...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | TTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTCAGTCCTTCTTGGCCTTGCTCTaGACCTGCGAGGGCGCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: FKRLLRARLTVTRGLRQSFLALL*TCEGAG Trigger: GCCGGCGCCCTCGCAGGTCAAGAGCAAGGCCAAGAA...GGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | GCTGACAGTTACACGTGGGTTGCGTCAGTCCCGTGTACACACGCGTTCAGCCATGGCTCGGGCAGCTGCTaGAACAAGTTCCGCAGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ADSYTWVASVPCTHAFSHGSGSC*NKFRRV Trigger: CACCCTGCGGAACTTGTTCAAGCAGCTGCCCGAGCC...ATGGCTGAACGCGTGTGTACACGGGACTGACGCAACCCACGTGTAACTGTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | TTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTCAGTCCTACTCGTCGCTGTGCTaGTCCACGGTCTTCTTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: FKRLLRARLTVTRGLRQSYSSLC*STVFLA Trigger: GGCCAAGAAGACCGTGGACAAGCACAGCGACGAGTA...GGACTGACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | CAAAACATCAACAGCAACAAGCCCGTAGGAACATCTTTAAGCGATTACTCAGGGGCCTCCTCCTTCCGCTaGCAGTCCGCGGGCTCGAAG | + |
|
Preference number: 5 (lower is better) Translates to: QNINSNKPVGTSLSDYSGASSFR*QSAGSK Trigger: CTTCGAGCCCGCGGACTGCAAGCGGAAGGAGGAGGC...CCCTGAGTAATCGCTTAAAGATGTTCCTACGGGCTTGTTGCTGTTGATGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGACAGTTACACGTGGGTaGCGTCAGTCCCGTGTACAC | + |
|
Preference number: 5 (lower is better) Translates to: RRNIFKRLLRARLTVTRGTVTRG*RQSRVH Trigger: GTGTACACGGGACTGACGCAACCCACGTGTAACTGT...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | TCTGTACACATAGACGTTTCTTCTTTAAATAACACCACGGGCGGGAGCCCCATCTTGTCCACGGTCTTCTaGGCCTTGCTCTTGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SVHIDVSSLNNTTGGSPILSTVF*ALLLTC Trigger: GCAGGTCAAGAGCAAGGCCAAGAAGACCGTGGACAA...GATGGGGCTCCCGCCCGTGGTGTTATTTAAAGAAGAAACGTCTATGTGTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | CGTAGGAACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGCCATGTTTAAACCGATaGCATCAACTTCGAAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRNIFKRLLRARLTVTRGPCLNR*HQLRNR Trigger: CCGGTTTCGAAGTTGATGCAATCGGTTTAAACATGG...CCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTTCCTACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | AGCCCCATCTGCATGTGCGGTTGGTTTGGACAAAAATATAGATATATATATATAACGGTCTTCTTGGCCTaGCTCTTGACCTGCGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPICMCGWFGQKYRYIYITVFLA*LLTCEG Trigger: GCCCTCGCAGGTCAAGAGCAAGGCCAAGAAGACCGT...TATATATATATATCTATATTTTTGTCCAAACCAACCGCACATGCAGATGGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS-3UTR CAA 90 bp | AACATCTTTAAGCGATTACTCAGGGCCCGGCTGACAGTTACACGTGGGTTGCGTGCATGTGCGGTTGGTTaGGACAAAAATATAGATATA | + |
|
Preference number: 5 (lower is better) Translates to: NIFKRLLRARLTVTRGLRACAVG*DKNIDI Trigger: TATATCTATATTTTTGTCCAAACCAACCGCACATGC...ACGCAACCCACGTGTAACTGTCAGCCGGGCCCTGAGTAATCGCTTAAAGATGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CAA 90 bp | TCCTCCTTCCGCTTGCAGTCCGCGGGCTCGAAGCCCGGCTCCGCCTaGAGCTCGGCGGGCGGCGGCGGCGGCGGGGGCGGTGGGTGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SSFRLQSAGSKPGSA*SSAGGGGGGGGGCR Trigger: CCTGCACCCACCGCCCCCGCCGCCGCCGCCGCCCGCCGAGCTCAAGGCGGAGCCGGGCTTCGAGCCCGCGGACTGCAAGCGGAAGGAGGA 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CCA 72 bp | GGCTCGGCGTGCCGGGCGGGCTGGACGAGGAGGACGTaGAGAGGCTCCCGCTGCTGCCGCTCGGCACCGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSACRAGWTRRT*RGSRCCRSAPP Trigger: AGGCGGTGCCGAGCGGCAGCAGCGGGAGCCTCTCCACGTCCTCCTCGTCCAGCCCGCCCGGCACGCCGAGCC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS GCA 72 bp | TCGTCGGAGAAGAGGTCGGAGAGGAAGTCGTGGTGCTaGCCGGAGGAGGCGGGCGCGGGGGCGGGCGCGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SSEKRSERKSWC*PEEAGAGAGAG Trigger: GCCCGCGCCCGCCCCCGCGCCCGCCTCCTCCGGGCAGCACCACGACTTCCTCTCCGACCTCTTCTCCGACGA 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS TCA 72 bp | GGGCCTGCGGCGCGCCCAGCGGCTCCAGGTACGGGCTaGAGTCGATGGCGCGCTCGTGGTCGCCGATGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GPAARPAAPGTG*SRWRARGRRCC Trigger: GCAGCATCGGCGACCACGAGCGCGCCATCGACTTCAGCCCGTACCTGGAGCCGCTGGGCGCGCCGCAGGCCC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CAA 72 bp | TGGCCGGAGGAGGCGAGCAGGGGCTCGGGCAGCTGCTaGAACAAGTTCCGCAGGGTGCTGAGCTCGCGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: WPEEASRGSGSC*NKFRRVLSSRD Trigger: GTCGCGCGAGCTCAGCACCCTGCGGAACTTGTTCAAGCAGCTGCCCGAGCCCCTGCTCGCCTCCTCCGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CCA 72 bp | GCTATTAGTGAGGGGGCTGGTGGCTGGACCCTCGGGTaGGTCCCCTTCCCAGTCCCGTGCGCGGCTCTGACT | + |
|
Preference number: 6 (lower is better) Translates to: AISEGAGGWTLG*VPFPVPCAALT Trigger: AGTCAGAGCCGCGCACGGGACTGGGAAGGGGACCCACCCGAGGGTCCAGCCACCAGCCCCCTCACTAATAGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS GCA 72 bp | GCCCCAGGCTCACGTAGCCGTACTCGGCCGGCTTCTTaGAGTTCTTGCCCCCGTAGTCGTCGGAGAAGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: APGSRSRTRPAS*SSCPRSRRRRG Trigger: ACCTCTTCTCCGACGACTACGGGGGCAAGAACTGCAAGAAGCCGGCCGAGTACGGCTACGTGAGCCTGGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS GCA 72 bp | AACAAGTTCCGCAGGGTGCTGAGCTCGCGCGACAGCTaGTCCACCTTCTTCTGCAGCCGCTCGTTCTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: NKFRRVLSSRDS*STFFCSRSFSA Trigger: GGCCGAGAACGAGCGGCTGCAGAAGAAGGTGGAGCAGCTGTCGCGCGAGCTCAGCACCCTGCGGAACTTGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS CAA 72 bp | ATCTTGTACTCGTCGCTGTGCTTGTCCACGGTCTTCTaGGCCTTGCTCTTGACCTGCGAGGGCGCCGGCGCG | + |
|
Preference number: 6 (lower is better) Translates to: ILYSSLCLSTVF*ALLLTCEGAGA Trigger: CGCGCCGGCGCCCTCGCAGGTCAAGAGCAAGGCCAAGAAGACCGTGGACAAGCACAGCGACGAGTACAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||
| CDS GCA 72 bp | TCACGTAGCCGTACTCGGCCGGCTTCTTGCAGTTCTTaGCCCCGTAGTCGTCGGAGAAGAGGTCGGAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: SRSRTRPASCSS*PRSRRRRGRRG Trigger: TCCTCTCCGACCTCTTCTCCGACGACTACGGGGGCAAGAACTGCAAGAAGCCGGCCGAGTACGGCTACGTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000303004.5 |
||