Pregenerated sensors for CEACAM8 (Homo sapiens)
Ensembl gene IDs: ENSG00000124469Ensembl transcript IDs: ENST00000244336.10
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACGTTGCGGCCAGTGGCTaGGTTAGTGGTGTGGCAGGC | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNVAASG*VSGVAG Trigger: GCCTGCCACACCACTAACTCAGCCACTGGCCGCAAC...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR GCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACAGGGGATGCGCCATCTaGAGGAAGGGGCTGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNRGCAI*RKGLRW Trigger: CCATCTCAGCCCCTTCCTGCAGATGGCGCATCCCCT...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACCCAGAAGGTGAAAAGTaGGGCTGTGAGCAGGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNPEGEK*GCEQEP Trigger: GGGCTCCTGCTCACAGCCTCACTTTTCACCTTCTGG...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACGAGGCAGGCGGACCATaGAGTCAGGAGATTGAGACC | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNEAGGP*SQEIET Trigger: GGTCTCAATCTCCTGACTTCATGGTCCGCCTGCCTC...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACAGAACTTTGGGAGGCTaGGGCAGGCGGACCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNRTLGG*GRRTMK Trigger: CTTCATGGTCCGCCTGCCTCAGCCTCCCAAAGTTCT...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR GCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACCCAGGAGGCGGAGCTTaGAGTGAGTTGAGATCGTGC | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNPGGGA*SELRSC Trigger: GCACGATCTCAACTCACTGCAAGCTCCGCCTCCTGG...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACCTGTGTCATTTCTGGTaGCGTTCCGCATCAGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNLCHFW*RSASAG Trigger: CCCTGCTGATGCGGAACGTCACCAGAAATGACACAG...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACGAGCTTGCAGTGAGTTaGGATCGTGCCACTGCACTC | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNELAVS*DRATAL Trigger: GAGTGCAGTGGCACGATCTCAACTCACTGCAAGCTC...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR GCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACCTCTCGATTGCTGTATaGAGGCCCTGGGGTAATCTG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNLSIAV*RPWGNL Trigger: CAGATTACCCCAGGGCCTGCATACAGCAATCGAGAG...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACAATGGTGGGGGCATCTaGGCCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNNGGGI*AIEDIQ Trigger: CTGAATGTCCTCTATGGCCCAGATGCCCCCACCATT...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACAGTTGCCCAGTTCTGTaGCAGTCAGGTAGGGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNSCPVL*QSGREQ Trigger: TTGCTCCCTACCTGACTGCCACAGAACTGGGCAACT...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACATGAAGTCAGGAGATTaGGACCACAGTGAAACCCCG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNMKSGD*DHSETP Trigger: CGGGGTTTCACTGTGGTCTCAATCTCCTGACTTCAT...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACGCTGGAATGTGCCATTaGCAGACCAAGAATACTGTG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNAGMCH*QTKNTV Trigger: CACAGTATTCTTGGTCTGTCAATGGCACATTCCAGC...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACTTTCCTTCTGTGTTTTaGTGGGCAACTTCACAAAGG | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNFPSVF*WATSQR Trigger: CCTTTGTGAAGTTGCCCACCAAAACACAGAAGGAAA...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACTTTTGTGTGTATTGCTaGAATGTGCCATTGACAGAC | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNFCVYC*NVPLTD Trigger: GTCTGTCAATGGCACATTCCAGCAATACACACAAAA...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACCCTGGGGTAATCTGTTaGTTTGATATTACATATCCT | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNPGVIC*FDITYP Trigger: AGGATATGTAATATCAAATCAACAGATTACCCCAGG...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACACATATGAATACTCATaGATAGTTGCCCAGTTCTGT | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNTYEYS*IVAQFC Trigger: ACAGAACTGGGCAACTATTCATGAGTATTCATATGT...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR TCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACGTAAAAATTTGGGGTTaGCACGATAGATTAGACACT | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNVKIWG*HDRLDT Trigger: AGTGTCTAATCTATCGTGTCAACCCCAAATTTTTAC...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CCA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACCTAGCATTGCATGCCTaGGTTAAATTAAAACAGACA | + |
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Preference number: 4 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNLALHA*VKLKQT Trigger: TGTCTGTTTTAATTTAACCCAGGCATGCAATGCTAG...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CAA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACTGCTGGAATGTGCCATaGACAGACCAAGAATACTGT | + |
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Preference number: 5 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNCWNVP*TDQEYC Trigger: ACAGTATTCTTGGTCTGTCAATGGCACATTCCAGCA...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CAA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACGAGCTTTTGTGTGTATaGCTGGAATGTGCCATTGAC | + |
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Preference number: 5 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNELLCV*LECAID Trigger: GTCAATGGCACATTCCAGCAATACACACAAAAGCTC...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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| CDS-3UTR CAA 90 bp | GCTTTGAGGAAGAATAAAAACAACTGTCTGCCAGTCTTCTTGAAATGCAGAAACTTTTCCTTCTGTGTTTaGGTGGGCAACTTCACAAAG | + |
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Preference number: 5 (lower is better) Translates to: ALRKNKNNCLPVFLKCRNFSFCV*VGNFTK Trigger: CTTTGTGAAGTTGCCCACCAAAACACAGAAGGAAAA...GTTTCTGCATTTCAAGAAGACTGGCAGACAGTTGTTTTTATTCTTCCTCAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000244336.10 |
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