Pregenerated sensors for CEACAM6 (Homo sapiens)
Ensembl gene IDs: ENSG00000086548Ensembl transcript IDs: ENST00000199764.7
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTGGCACACACCTCAGGCCTGAGGGTTTTCCCTTTAAATTTTCATTaGGTTGTCCATCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: VAHTSGLRVFPLNFH*VVHLQHIGLQEQSR Trigger: TCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGATGGACAACTCAATGAAAATTTAAAGGGAAAACCCTCAGGCCTGAGGTGTGTGCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CCA 90 bp | TATAGGGCTTCAGGAGCAGAGCAGACCTTGTTTTTAGTGGTTCCATaGGATAAAATGGGATTGGAGGAGCTAGAAGAATTCAGGGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: YRASGAEQTLFLVVP*DKMGLEELEEFRVW Trigger: CCAGACCCTGAATTCTTCTAGCTCCTCCAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR GCA 90 bp | TGTAATTCCAGCCAAAGAGAGACCATTCACTATTTGATGGCTGGCTaGATGCAGACATTTAAAGCTTTTAGAGAATACACTACACCAGGG | + |
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Preference number: 1 (lower is better) Translates to: CNSSQRETIHYLMAG*MQTFKAFREYTTPG Trigger: CCCTGGTGTAGTGTATTCTCTAAAAGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATAGTGAATGGTCTCTCTTTGGCTGGAATTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR TCA 90 bp | TCTCTGAGTTTTGTAATTCCAGCCAAAGAGAGACCATTCACTATTTaGTGGCTGGCTGCATGCAGACATTTAAAGCTTTTAGAGAATACA | + |
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Preference number: 1 (lower is better) Translates to: SLSFVIPAKERPFTI*WLAACRHLKLLENT Trigger: TGTATTCTCTAAAAGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATAGTGAATGGTCTCTCTTTGGCTGGAATTACAAAACTCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 90 bp | AGTGGCACACACCTCAGGCCTGAGGGTTTTCCCTTTAAATTTTCATaGAGTTGTCCATCTCCAGCATATAGGGCTTCAGGAGCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: SGTHLRPEGFPFKFS*SCPSPAYRASGAEQ Trigger: CTGCTCTGCTCCTGAAGCCCTATATGCTGGAGATGGACAACTCAATGAAAATTTAAAGGGAAAACCCTCAGGCCTGAGGTGTGTGCCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 90 bp | GCAGAGCAGACCTTGTTTTTAGTGGTTCCATGGGATAAAATGGGATaGGAGGAGCTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTC | + |
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Preference number: 2 (lower is better) Translates to: AEQTLFLVVPWDKMG*EELEEFRVWSNLPV Trigger: GACTGGCAGATTGGACCAGACCCTGAATTCTTCTAGCTCCTCCAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGTCTGCTCTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 90 bp | AGTTGTCCATCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGACCTaGTTTTTAGTGGTTCCATGGGATAAAATGGGATTGGAGGAGCTA | + |
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Preference number: 2 (lower is better) Translates to: SCPSPAYRASGAEQT*FLVVPWDKMGLEEL Trigger: TAGCTCCTCCAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGATGGACAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGACCTTGTTTTTAGTGGTTCCATGGGATAAAATGGGATTGGAGGAGCTAGAAGAATTCAGGGTCTaGTCCAATCTGCCAGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: EQTLFLVVPWDKMGLEELEEFRV*SNLPVF Trigger: GAAGACTGGCAGATTGGACCAGACCCTGAATTCTTC...TAGCTCCTCCAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGTCTGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 90 bp | TTCTCTGAGTTTTGTAATTCCAGCCAAAGAGAGACCATTCACTATTaGATGGCTGGCTGCATGCAGACATTTAAAGCTTTTAGAGAATAC | + |
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Preference number: 2 (lower is better) Translates to: FSEFCNSSQRETIHY*MAGCMQTFKAFREY Trigger: GTATTCTCTAAAAGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATAGTGAATGGTCTCTCTTTGGCTGGAATTACAAAACTCAGAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCTTTCTCACCATGGTTTaGAGTTTGACTGTCTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: FVIYELKQHHSTSTVIAPFLTMV*SLTVSS Trigger: ACTAGAGACAGTCAAACTGCAAACCATGGTGAGAAA...GGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAATCACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR-3UTR GCA 90 bp | TTTGTGATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCTATTTGATGGCTGGCTaGATGCAGACATTTAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FVIYELKQHHSTSTVIAPYLMAG*MQTFKA Trigger: AGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATA...GGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAATCACAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR-3UTR CCA 90 bp | CCAAGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTAAGCAATTCTATTATTTaGCATTGCATGGCTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: PSSTFVNFYNLVSAIPIVSNSII*HCMAGL Trigger: CAACCCAGCCATGCAATGCCAAATAATAGAATTGCT...TACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCTTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCACAATACAAGAACAGTaGGTTTTGTCAAATTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: FVIYELKQHHSTSTVIAPTIQEQ*VLSNWN Trigger: GTTCCAATTTGACAAAACCCACTGTTCTTGTATTGT...GGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAATCACAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR TCA 72 bp | ACCTCAGGCCTGAGGGTTTTCCCTTTAAATTTTCATTaGGTTGTCCATCTCCAGCATATAGGGCTTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: TSGLRVFPLNFH*VVHLQHIGLQE Trigger: CTCCTGAAGCCCTATATGCTGGAGATGGACAACTCAATGAAAATTTAAAGGGAAAACCCTCAGGCCTGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR GCA 72 bp | GCTACTTCTTGTGAAATACTAATGACAGCATCATCCTaGCAAGCGAAAGAGGCAGGCATAAGCAAGGACAAA | + |
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Preference number: 3 (lower is better) Translates to: ATSCEILMTASS*QAKEAGISKDK Trigger: TTTGTCCTTGCTTATGCCTGCCTCTTTCGCTTGGCAGGATGATGCTGTCATTAGTATTTCACAAGAAGTAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CCA 72 bp | AAAATGGGATTGGAGGAGCTAGAAGAATTCAGGGTCTaGTCCAATCTGCCAGTCTTCCTGAAATATCGAAAA | + |
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Preference number: 3 (lower is better) Translates to: KMGLEELEEFRV*SNLPVFLKYRK Trigger: TTTTCGATATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAGCTCCTCCAATCCCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR TCA 72 bp | CTTGTTTTGACATCTTGGGAAAAGCTGTCCATAGTGTaGAGTCGTCAATTTCTCACCATGGTTTGCAGTTTG | + |
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Preference number: 3 (lower is better) Translates to: LVLTSWEKLSIV*SRQFLTMVCSL Trigger: CAAACTGCAAACCATGGTGAGAAATTGACGACTTCACACTATGGACAGCTTTTCCCAAGATGTCAAAACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR-3UTR CAA 90 bp | ATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCCCTGGGTTCTATTATTTGGCATaGCATGGCTGGGTTGAATTA | + |
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Preference number: 3 (lower is better) Translates to: IYELKQHHSTSTVIAPPGFYYLA*HGWVEL Trigger: TAATTCAACCCAGCCATGCAATGCCAAATAATAGAA...CCCAGGGGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR GCA 72 bp | AGCCAAAGAGAGACCATTCACTATTTGATGGCTGGCTaGATGCAGACATTTAAAGCTTTTAGAGAATACACT | + |
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Preference number: 3 (lower is better) Translates to: SQRETIHYLMAG*MQTFKAFREYT Trigger: AGTGTATTCTCTAAAAGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATAGTGAATGGTCTCTCTTTGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CCA 72 bp | CTTAAAGCATTAGTGCTATTATCAGTTACCACCATTTaGGGCTTTTATCCTTCATGGGTTATGATGTTCTCC | + |
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Preference number: 3 (lower is better) Translates to: LKALVLLSVTTI*GFYPSWVMMFS Trigger: GGAGAACATCATAACCCATGAAGGATAAAAGCCCCAAATGGTGGTAACTGATAATAGCACTAATGCTTTAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR GCA 90 bp | CTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTCTTCCTGAAATATCGAAAATCCTTCCAGGGGACATaGAATCTGCAGGGAGGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LEEFRVWSNLPVFLKYRKSFQGT*NLQGGA Trigger: AGCCCCTCCCTGCAGATTGCATGTCCCCTGGAAGGA...TTTTCGATATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | GGAGGAGCTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTCTTCCTGAAATAAGCTCCGGGTATACATaGAACTGTCCGGTTGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: GGARRIQGLVQSASLPEISSGYT*NCPVAS Trigger: AGAAGCAACCGGACAGTTCCATGTATACCCGGAGCT...TATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAGCTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR TCA 90 bp | GAGCCTTATCATGATGAGGAGTCTTGTTTTGACATCTTGGGAAAAGCTGTCCATTTAGAAGTGAGGCTGTaGGCAGGACCTCCTTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: EPYHDEESCFDILGKAVHLEVRL*AGPPSR Trigger: CCTGGAAGGAGGTCCTGCTCACAGCCTCACTTCTAA...ATGGACAGCTTTTCCCAAGATGTCAAAACAAGACTCCTCATCATGATAAGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR GCA 90 bp | AGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTATTTAGGGGACATGCAATCTaGAGGGAGGGGCTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSTFVNFYNLVSAIPIVFRGHAI*REGLRG Trigger: CCCCCTCAGCCCCTCCCTGCAGATTGCATGTCCCCT...AAATACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR TCA 90 bp | ATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCCCTGGGAGACCATTCACTATTTaGTGGCTGGCTGCATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: IYELKQHHSTSTVIAPPGRPFTI*WLAACR Trigger: TCTGCATGCAGCCAGCCATCAAATAGTGAATGGTCT...CCCAGGGGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR TCA 90 bp | TCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGACCTTGTTTTTAGTGGTTCCAATCCTTCATGGGTTATaGTGTTCTCCTGATGACACA | + |
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Preference number: 4 (lower is better) Translates to: SPAYRASGAEQTLFLVVPILHGL*CSPDDT Trigger: TGTGTCATCAGGAGAACATCATAACCCATGAAGGAT...TGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 72 bp | TCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGACCTaGTTTTTAGTGGTTCCATGGGATAAAATGGGATTG | + |
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Preference number: 4 (lower is better) Translates to: SPAYRASGAEQT*FLVVPWDKMGL Trigger: CAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 72 bp | CACCTCAGGCCTGAGGGTTTTCCCTTTAAATTTTCATaGAGTTGTCCATCTCCAGCATATAGGGCTTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: HLRPEGFPFKFS*SCPSPAYRASG Trigger: TCCTGAAGCCCTATATGCTGGAGATGGACAACTCAATGAAAATTTAAAGGGAAAACCCTCAGGCCTGAGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 72 bp | CCTCCCTGTTCAGCTGGTAGGGAGCAATTCTATTATTaGGCATTGCATGGCTGGGTTGAATTAAAACAGGGA | + |
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Preference number: 4 (lower is better) Translates to: PPCSAGREQFYY*ALHGWVELKQG Trigger: TCCCTGTTTTAATTCAACCCAGCCATGCAATGCCAAATAATAGAATTGCTCCCTACCAGCTGAACAGGGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR TCA 90 bp | TCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGACCTTGTTTTTAGTGGTTCCAATCTGCCAGTCTTCCTaGAATATCGAAAATACACCA | + |
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Preference number: 4 (lower is better) Translates to: SPAYRASGAEQTLFLVVPICQSS*NIENTP Trigger: TGGTGTATTTTCGATATTTCAGGAAGACTGGCAGAT...TGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR GCA 90 bp | TCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGACCTTGTTTTTAGTGGTTCCATATTTGATGGCTGGCTaGATGCAGACATTTAAAGCT | + |
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Preference number: 4 (lower is better) Translates to: SPAYRASGAEQTLFLVVPYLMAG*MQTFKA Trigger: AGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATA...TGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 72 bp | ACCTTGTTTTTAGTGGTTCCATGGGATAAAATGGGATaGGAGGAGCTAGAAGAATTCAGGGTCTGGTCCAAT | + |
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Preference number: 4 (lower is better) Translates to: TLFLVVPWDKMG*EELEEFRVWSN Trigger: ATTGGACCAGACCCTGAATTCTTCTAGCTCCTCCAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR TCA 90 bp | TTTGTGATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCATGCGCTCACCTAGGTaGGAGTGTGACCAAATCTTA | + |
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Preference number: 4 (lower is better) Translates to: FVIYELKQHHSTSTVIAPMRSPR*ECDQIL Trigger: TAAGATTTGGTCACACTCTCACCTAGGTGAGCGCAT...GGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAATCACAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR GCA 90 bp | CACTCTGTTAAGTTACCCTCTGAAGCTACTTCTTGTGAAATACTAATGACAGCAACAAGTGTCAGAAACTaGACAGACTCCTCCCTGTTC | + |
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Preference number: 4 (lower is better) Translates to: HSVKLPSEATSCEILMTATSVRN*TDSSLF Trigger: GAACAGGGAGGAGTCTGTGCAGTTTCTGACACTTGT...TGCTGTCATTAGTATTTCACAAGAAGTAGCTTCAGAGGGTAACTTAACAGAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTAGAAGAATTCAGGGTCTaGTCCAATCTGCCAGTCTTC | + |
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Preference number: 4 (lower is better) Translates to: PSSTFVNFYNLVSAIPIVEEFRV*SNLPVF Trigger: GAAGACTGGCAGATTGGACCAGACCCTGAATTCTTC...TACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCTTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | AGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTATTTAATGGTGGGGACATCTaGGCCATAGAGGACATTCAG | + |
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Preference number: 4 (lower is better) Translates to: SSTFVNFYNLVSAIPIVFNGGDI*AIEDIQ Trigger: CTGAATGTCCTCTATGGCCCAGATGTCCCCACCATT...AAATACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR TCA 90 bp | CACTCTGTTAAGTTACCCTCTGAAGCTACTTCTTGTGAAATACTAATGACAGCACTAGAAGTCCAACTCTaGAAAGGACCACTGTACATT | + |
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Preference number: 4 (lower is better) Translates to: HSVKLPSEATSCEILMTALEVQL*KGPLYI Trigger: AATGTACAGTGGTCCTTTTCAGAGTTGGACTTCTAG...TGCTGTCATTAGTATTTCACAAGAAGTAGCTTCAGAGGGTAACTTAACAGAGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | TTTGTGATTTATGAATTAAAGCAGCACCACTCTACAAGTACAGTGATAGCTCCCTCAGTTACCACCATTTaGGGCTTTTATCCTTCATGG | + |
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Preference number: 4 (lower is better) Translates to: FVIYELKQHHSTSTVIAPSVTTI*GFYPSW Trigger: CCATGAAGGATAAAAGCCCCAAATGGTGGTAACTGA...GGGAGCTATCACTGTACTTGTAGAGTGGTGCTGCTTTAATTCATAAATCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | GAGCAGACCTTGTTTTTAGTGGTTCCATGGGATAAAATGGGATTGGAGGAGCTAACAATACAAGAACAGTaGGTTTTGTCAAATTGGAAC | + |
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Preference number: 4 (lower is better) Translates to: EQTLFLVVPWDKMGLEELTIQEQ*VLSNWN Trigger: GTTCCAATTTGACAAAACCCACTGTTCTTGTATTGT...TAGCTCCTCCAATCCCATTTTATCCCATGGAACCACTAAAAACAAGGTCTGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR GCA 90 bp | TTTCCCTTTAAATTTTCATTGAGTTGTCCATCTCCAGCATATAGGGCTTCAGGATTTCTCACCATGGTTTaGAGTTTGACTGTCTCTAGT | + |
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Preference number: 4 (lower is better) Translates to: FPFKFSLSCPSPAYRASGFLTMV*SLTVSS Trigger: ACTAGAGACAGTCAAACTGCAAACCATGGTGAGAAA...TCCTGAAGCCCTATATGCTGGAGATGGACAACTCAATGAAAATTTAAAGGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| 3UTR CAA 72 bp | TTTTGTAATTCCAGCCAAAGAGAGACCATTCACTATTaGATGGCTGGCTGCATGCAGACATTTAAAGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: FCNSSQRETIHY*MAGCMQTFKAF Trigger: AAAAGCTTTAAATGTCTGCATGCAGCCAGCCATCAAATAGTGAATGGTCTCTCTTTGGCTGGAATTACAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | AGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTATTTTCTTGTGTGGATTGCTaGAACGTCCCATTGATAAAC | + |
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Preference number: 4 (lower is better) Translates to: SSTFVNFYNLVSAIPIVFSCVDC*NVPLIN Trigger: GTTTATCAATGGGACGTTCCAGCAATCCACACAAGA...AAATACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | CCAAGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTACTAACTCAAGTAGACTaGAATCTCCTGTGTTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: PSSTFVNFYNLVSAIPIVLTQVD*NLLCSF Trigger: AAAAGAACACAGGAGATTCCAGTCTACTTGAGTTAG...TACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCTTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CCA 90 bp | AGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTATTTAGCAATTCTATTATTTaGCATTGCATGGCTGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SSTFVNFYNLVSAIPIVFSNSII*HCMAGL Trigger: CAACCCAGCCATGCAATGCCAAATAATAGAATTGCT...AAATACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | GGAGGAGCTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTCTTCCTGAAATAGGAGCAGAGCAGACCTaGTTTTTAGTGGTTCCATGG | + |
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Preference number: 5 (lower is better) Translates to: GGARRIQGLVQSASLPEIGAEQT*FLVVPW Trigger: CCATGGAACCACTAAAAACAAGGTCTGCTCTGCTCC...TATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAGCTCCTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTCTTCCTGAAATATCGAAAGAGACCATTCACTATTaGATGGCTGGCTGCATGCAG | + |
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Preference number: 5 (lower is better) Translates to: ARRIQGLVQSASLPEISKETIHY*MAGCMQ Trigger: CTGCATGCAGCCAGCCATCAAATAGTGAATGGTCTC...TTTCGATATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | TCTCCAGCATATAGGGCTTCAGGAGCAGAGCAGACCTTGTTTTTAGTGGTTCCAATGAGGAGTCTTGTTTaGACATCTTGGGAAAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: SPAYRASGAEQTLFLVVPMRSLV*TSWEKL Trigger: CAGCTTTTCCCAAGATGTCAAAACAAGACTCCTCAT...TGGAACCACTAAAAACAAGGTCTGCTCTGCTCCTGAAGCCCTATATGCTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | GCTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTCTTCCTGAAATATCGAAAATCAGTTACCACCATTaGGGGCTTTTATCCTTCATG | + |
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Preference number: 5 (lower is better) Translates to: ARRIQGLVQSASLPEISKISYHH*GLLSFM Trigger: CATGAAGGATAAAAGCCCCAAATGGTGGTAACTGAT...TTTCGATATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | GAGCCTTATCATGATGAGGAGTCTTGTTTTGACATCTTGGGAAAAGCTGTCCATCCCTTTAAATTTTCATaGAGTTGTCCATCTCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: EPYHDEESCFDILGKAVHPFKFS*SCPSPA Trigger: TGCTGGAGATGGACAACTCAATGAAAATTTAAAGGG...ATGGACAGCTTTTCCCAAGATGTCAAAACAAGACTCCTCATCATGATAAGGCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | CTAGAAGAATTCAGGGTCTGGTCCAATCTGCCAGTCTTCCTGAAATATCGAAAATTCTATTATTTGGCATaGCATGGCTGGGTTGAATTA | + |
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Preference number: 5 (lower is better) Translates to: LEEFRVWSNLPVFLKYRKFYYLA*HGWVEL Trigger: TAATTCAACCCAGCCATGCAATGCCAAATAATAGAA...TTTTCGATATTTCAGGAAGACTGGCAGATTGGACCAGACCCTGAATTCTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | CCAAGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTAGAGCAATTCTATTATTaGGCATTGCATGGCTGGGTT | + |
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Preference number: 5 (lower is better) Translates to: PSSTFVNFYNLVSAIPIVEQFYY*ALHGWV Trigger: AACCCAGCCATGCAATGCCAAATAATAGAATTGCTC...TACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | CCAAGCAGCACATTTGTTAATTTCTACAACTTAGTCTCAGCGATACCCATTGTAGTGGGTTTTGTCAAATaGGAACAAGGAAACAGAACC | + |
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Preference number: 5 (lower is better) Translates to: PSSTFVNFYNLVSAIPIVVGFVK*EQGNRT Trigger: GGTTCTGTTTCCTTGTTCCAATTTGACAAAACCCAC...TACAATGGGTATCGCTGAGACTAAGTTGTAGAAATTAACAAATGTGCTGCTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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| CDS-3UTR CAA 90 bp | ACATTTAAAGCTTTTAGAGAATACACTACACCAGGGAGTATGACTACTAGTATGTCCTTAACATTTCAGTaGGAGTATGTAGCATTTAGC | + |
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Preference number: 5 (lower is better) Translates to: TFKAFREYTTPGSMTTSMSLTFQ*EYVAFS Trigger: GCTAAATGCTACATACTCCAACTGAAATGTTAAGGA...CATACTAGTAGTCATACTCCCTGGTGTAGTGTATTCTCTAAAAGCTTTAAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000199764.7 |
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