Pregenerated sensors for CEACAM4 (Homo sapiens)

Ensembl gene IDs: ENSG00000105352

Ensembl transcript IDs: ENST00000221954.6, ENST00000600925.1, ENST00000616476.1, ENST00000626555.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS CAA 90 bp	CAGGAAGGCCTGGGACGTTGTTTTGGTGTACGTGGAGCTGGCCAGTaGCTTGGTCAGAGTCGTAACTGGCATTTATGGTTCGTAGGGTGT	+
Preference number: 6 (lower is better) Translates to: QEGLGRCFGVRGAGQ*LGQSRNWHLWFVGC Trigger: ACACCCTACGAACCATAAATGCCAGTTACGACTCTGACCAAGCAACTGGCCAGCTCCACGTACACCAAAACAACGTCCCAGGCCTTCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221954.6 ENST00000600925.1 ENST00000616476.1 ENST00000626555.2
CDS GCA 72 bp	TGGGACGTTGTTTTGGTGTACGTGGAGCTGGCCAGTTaGTTGGTCAGAGTCGTAACTGGCATTTATGGTTCG	+
Preference number: 6 (lower is better) Translates to: WDVVLVYVELAS*LVRVVTGIYGS Trigger: CGAACCATAAATGCCAGTTACGACTCTGACCAAGCAACTGGCCAGCTCCACGTACACCAAAACAACGTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221954.6 ENST00000600925.1 ENST00000616476.1 ENST00000626555.2
CDS CAA 72 bp	CTGGGACGTTGTTTTGGTGTACGTGGAGCTGGCCAGTaGCTTGGTCAGAGTCGTAACTGGCATTTATGGTTC	+
Preference number: 6 (lower is better) Translates to: LGRCFGVRGAGQ*LGQSRNWHLWF Trigger: GAACCATAAATGCCAGTTACGACTCTGACCAAGCAACTGGCCAGCTCCACGTACACCAAAACAACGTCCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000221954.6 ENST00000600925.1 ENST00000616476.1 ENST00000626555.2

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