Pregenerated sensors for CEACAM3 (Homo sapiens)
Ensembl gene IDs: ENSG00000170956Ensembl transcript IDs: ENST00000415495.5, ENST00000596544.1, ENST00000599662.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | CAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCAGGCAAGGGCTTGGGGCTaGTGCTCCTTGAGGTCACGC | + |
|
Preference number: 2 (lower is better) Translates to: QWREGTSRRQSCGRDHGQARAWG*CSLRSR Trigger: GCGTGACCTCAAGGAGCAGCAGCCCCAAGCCCTTGC...CTGGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCAGGACATTCAGCGTGACTaGGTCACTGTAGCTGGCACC | + |
|
Preference number: 2 (lower is better) Translates to: QWREGTSRRQSCGRDHGQDIQRD*VTVAGT Trigger: GGTGCCAGCTACAGTGACCCAGTCACGCTGAATGTC...CTGGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| 3UTR-3UTR CCA 90 bp | GGCAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCGGTCACGCTGGATGCTaGTTCTTCCAGTTTTGGCAA | + |
|
Preference number: 2 (lower is better) Translates to: GSGERGHREGRAVGGTTAGHAGC*FFQFWQ Trigger: TTGCCAAAACTGGAAGAACCAGCATCCAGCGTGACC...GGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCAGTCCTTGAGGTCACGCTaGATGCTGGTTCTTCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: QWREGTSRRQSCGRDHGQSLRSR*MLVLPV Trigger: AACTGGAAGAACCAGCATCCAGCGTGACCTCAAGGA...CTGGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCAGTGGTTCTTCCAGTTTTaGCAAGGAGCAGGAAACACA | + |
|
Preference number: 2 (lower is better) Translates to: QWREGTSRRQSCGRDHGQWFFQF*QGAGNT Trigger: TGTGTTTCCTGCTCCTTGCCAAAACTGGAAGAACCA...CTGGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| 3UTR-3UTR CAA 90 bp | GGCAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCCTGGTTCTTCCAGTTTaGGCAAGGAGCAGGAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GSGERGHREGRAVGGTTALVLPV*ARSRKH Trigger: GTGTTTCCTGCTCCTTGCCAAAACTGGAAGAACCAG...GGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| CDS-3UTR GCA 90 bp | GGCAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCGCAAGGGCTTGGGGCTaGTGCTCCTTGAGGTCACGC | + |
|
Preference number: 4 (lower is better) Translates to: GSGERGHREGRAVGGTTAARAWG*CSLRSR Trigger: GCGTGACCTCAAGGAGCAGCAGCCCCAAGCCCTTGC...GGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| CDS-3UTR CCA 90 bp | CAGTGGAGAGAGGGGACATCGAGAAGGCAGAGCTGTGGGAGGGACCACGGCCAGGGTCACGCTGGATGCTaGTTCTTCCAGTTTTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QWREGTSRRQSCGRDHGQGHAGC*FFQFWQ Trigger: TTGCCAAAACTGGAAGAACCAGCATCCAGCGTGACC...CTGGCCGTGGTCCCTCCCACAGCTCTGCCTTCTCGATGTCCCCTCTCTCCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415495.5 |
||
| CDS CAA 72 bp | GTCATTTGGGAGGGTGCCAGGTTAAAAGCCACAACTTaGGAGTTCGAACAGGGGACAAGAAGGGAAACCCAT | + |
|
Preference number: 6 (lower is better) Translates to: VIWEGARLKATT*EFEQGTRRETH Trigger: ATGGGTTTCCCTTCTTGTCCCCTGTTCGAACTCCAAAGTTGTGGCTTTTAACCTGGCACCCTCCCAAATGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599662.1 |
||
| CDS TCA 72 bp | TTCTGCTCTGTTCCCTCCAGGGCTCTTGTCAACACCTaGACTCACATTCTAGATCTCTTTGGGTGTCTATCT | + |
|
Preference number: 6 (lower is better) Translates to: FCSVPSRALVNT*THILDLFGCLS Trigger: AGATAGACACCCAAAGAGATCTAGAATGTGAGTTCAGGTGTTGACAAGAGCCCTGGAGGGAACAGAGCAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000596544.1 |
||