RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEACAM16 (Homo sapiens)

Ensembl gene IDs: ENSG00000213892

Ensembl transcript IDs: ENST00000405314.2, ENST00000587331.7

Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTGGAGGCAGGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGTaGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTG +
Preference number: 1 (lower is better)
Translates to: VEAGEQQDHSLASSL*GSGSHSEGEDQRMV
Trigger: CACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCCTCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR CCA 90 bp GCTCTAGCTCTAGGGTGGAGGCAGGAGAACAGCAGGACCACAGCCTaGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGG +
Preference number: 1 (lower is better)
Translates to: ALALGWRQENSRTTA*HPRCGGVVPTQRAR
Trigger: CCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCCTCCACCCTAGAGCTAGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR CCA 90 bp GGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTaGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCAGGAGAACAGC +
Preference number: 1 (lower is better)
Translates to: GRLWPRWLPNSSARE*GPVALALGWRQENS
Trigger: GCTGTTCTCCTGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR CCA 90 bp CGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATaGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTG +
Preference number: 1 (lower is better)
Translates to: RCGGVVPTQRARTRG*CEELFSLDVSRVTL
Trigger: CAGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR CCA 90 bp AACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTaGAGGCAGGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGT +
Preference number: 1 (lower is better)
Translates to: NSSAREWGPVALALG*RQENSRTTAWHPRC
Trigger: ACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR-3UTR CCA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAAAGAGCTCTTCTCTCTaGACGTCTCCAGGGTCACGC +
Preference number: 2 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRKSSSL*TSPGSR
Trigger: GCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTT...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR CCA 72 bp GGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGTaGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAG +
Preference number: 3 (lower is better)
Translates to: GEQQDHSLASSL*GSGSHSEGEDQ
Trigger: CTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
3UTR CCA 72 bp GGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATaGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGG +
Preference number: 3 (lower is better)
Translates to: GVVPTQRARTRG*CEELFSLDVSR
Trigger: CCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp GCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCTGACGGCAGCTGGCTaGGCAGCCGGTTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: AGPQPGILAVGEWFPLRGLTAAG*AAGWAR
Trigger: CCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAG...CCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGAGGGCTCGGCTCCGTCTaGCGCAGGACCACGACTGGC +
Preference number: 4 (lower is better)
Translates to: PQPGILAVGEWFPLRGRGGLGSV*RRTTTG
Trigger: GCCAGTCGTGGTCCTGCGGCAGACGGAGCCGAGCCC...TCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS-3UTR GCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGTCCCGGCGGATGCCATaGCTGGCCAGCACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQSRRMP*LASTRP
Trigger: CGGCCGGGTGCTGGCCAGGCATGGCATCCGCCGGGA...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGATCCCGGCGGATGCCATaGCTGGCCAGCACCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LWGSGSHSEGEDQRMVRRSRRMP*LASTRP
Trigger: CGGCCGGGTGCTGGCCAGGCATGGCATCCGCCGGGA...TCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACCTCCTCCCGGCGGATaGCATGCCTGGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEAPPPGG*HAWPAP
Trigger: GGGTGCTGGCCAGGCATGGCATCCGCCGGGAGGAGG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCAAGCGGACCTCGGCGGTaGGGCTGGGGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEASGPRR*GWGCCT
Trigger: TGTGCAGCAGCCCCAGCCCCACCGCCGAGGTCCGCT...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCCTCGGACTCCCTTCCTaGTTGGGGCTCGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PRCGGVVPTQRARTRGWCLGLPS*LGLGSV
Trigger: GACGGAGCCGAGCCCCAACCAGGAAGGGAGTCCGAG...GCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACTCGGACTCCCTTCCTaGTTGGGGCTCGGCTCCGTC +
Preference number: 4 (lower is better)
Translates to: PQPGILAVGEWFPLRGRGLGLPS*LGLGSV
Trigger: GACGGAGCCGAGCCCCAACCAGGAAGGGAGTCCGAG...TCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTGCCTCCCGCCCCGTGTaGGCCGGGCCAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GEDQRMVRRALLSGRLQGASRPV*AGPGVS
Trigger: TGAGACTCCTGGCCCGGCCCACACGGGGCGGGAGGC...ACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGGGCCCTCCGTTGGCTTaGTGGGCACGGGCACGATCA +
Preference number: 4 (lower is better)
Translates to: AGPQPGILAVGEWFPLRGGPPLA*WARARS
Trigger: TGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCC...CCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGTTCCTGACGGCAGCTaGCTGAGCAGCCGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPEVPDGS*LSSRLG
Trigger: GCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAAC...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGCCAGGTATGACACGCTaGGTGTGGGCCCCGCATACC +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPEPGMTR*VWAPHT
Trigger: GGTATGCGGGGCCCACACTCAGCGTGTCATACCTGG...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGCTGGCCACCAGGTATaGCACGCTGAGTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMAGHQV*HAECGP
Trigger: GGGCCCACACTCAGCGTGTCATACCTGGTGGCCAGC...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGACAGGATGTAGGTGCCTaGGTGCCGGGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRQDVGA*VPGQDA
Trigger: GGCATCCTGCCCCGGCACTCAGGCACCTACATCCTG...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACAGGATGTAGGTGCCTaGGTGCCGGGGCAGGATGCC +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEAQDVGA*VPGQDA
Trigger: GGCATCCTGCCCCGGCACTCAGGCACCTACATCCTG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCAAGTGCCGGGGCAGGATaGCCTGGATGTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEASAGAG*PGCPGC
Trigger: GCAGCCTGGACATCCAGGGCATCCTGCCCCGGCACT...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGAGTGCCGGGGCAGGATaGCCTGGATGTCCAGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGSAGAG*PGCPGC
Trigger: GCAGCCTGGACATCCAGGGCATCCTGCCCCGGCACT...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCTCCCCTTCGCTCGGCTaGGCAGGCTCCAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: PRCGGVVPTQRARTRGWCSPSLG*AGSRVI
Trigger: TATCACCCTGGAGCCTGCCCAGCCGAGCGAAGGGGA...GCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGCCTCCCGCCCCGTGTaGGCCGGGCCAGGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: VPTQRARTRGWCEELFSLASRPV*AGPGVS
Trigger: TGAGACTCCTGGCCCGGCCCACACGGGGCGGGAGGC...CAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGAGTGTACGTCCCCTCCTaGGCGGCTGTCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PQPGILAVGEWFPLRGRGVYVPS*AAVMLL
Trigger: CAGCAGCATGACAGCCGCCCAGGAGGGGACGTACAC...TCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGGGCCCTCCGTTGGCTTaGTGGGCACGGGCACGATCA +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGGPPLA*WARARS
Trigger: TGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCC...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGACCAACAGCGAGCAGTTaGGGAAGCCCACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRPTASS*GSPPPG
Trigger: GCCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGG...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACATGGACGACCAGCGTaGCGTTGTCCCCTTCGCTCG +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEAHGRPA*RCPLRS
Trigger: CGAGCGAAGGGGACAACGTCACGCTGGTCGTCCATG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACCAGGTATGACACGCTaGGTGTGGGCCCCGCATACC +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEAPGMTR*VWAPHT
Trigger: GGTATGCGGGGCCCACACTCAGCGTGTCATACCTGG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGGCTGGCCACCAGGTATaGCACGCTGAGTGTGGGCCC +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQAGHQV*HAECGP
Trigger: GGGCCCACACTCAGCGTGTCATACCTGGTGGCCAGC...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGCTGACGGCAGCTGGCTaGGCAGCCGGTTGGGCTCGG +
Preference number: 4 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWLTAAG*AAGWAR
Trigger: CCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAG...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGCCTGGATGTCCAGGCTaGCATCGGGGCGCACAGCCT +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQPGCPG*HRGAQP
Trigger: AGGCTGTGCGCCCCGATGGCAGCCTGGACATCCAGG...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCTCCTCCCGGCGGATaGCATGCCTGGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSPPPGG*HAWPAP
Trigger: GGGTGCTGGCCAGGCATGGCATCCGCCGGGAGGAGG...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGACCTCCCGGCCTGTGTaGGCGGGGCCTGCAATCCAG +
Preference number: 4 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTTSRPV*AGPAIQ
Trigger: CTGGATTGCAGGCCCCGCGCACACAGGCCGGGAGGT...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCATCCCCCGAAAGCCCATaGACGACCAGCGTGACGTTG +
Preference number: 4 (lower is better)
Translates to: QPGILAVGEWFPLRGRGPSPESP*TTSVTL
Trigger: CAACGTCACGCTGGTCGTCCATGGGCTTTCGGGGGA...TGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGGCCAAGACTGTGGGCTaGGCCAGGATCTCATGGACC +
Preference number: 4 (lower is better)
Translates to: AGPQPGILAVGEWFPLRGAKTVG*ARISWT
Trigger: GGTCCATGAGATCCTGGCCCAGCCCACAGTCTTGGC...CCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCAGCGGACCTCGGCGGTaGGGCTGGGGCTGCTGCACA +
Preference number: 4 (lower is better)
Translates to: SEGEDQRMVRRALLSGRLSGPRR*GWGCCT
Trigger: TGTGCAGCAGCCCCAGCCCCACCGCCGAGGTCCGCT...GAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGACGGGTGGTGGAATCCTaGAGGATGGCCACACGCTCT +
Preference number: 4 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRRVVES*RMATRS
Trigger: AGAGCGTGTGGCCATCCTCCAGGATTCCACCACCCG...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACTGCAGCCTGTGCGGGTaGTGGAATCCTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDCSLCG*WNPGGW
Trigger: CCATCCTCCAGGATTCCACCACCCGCACAGGCTGCA...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGACACATACTCGGGCTCTaGGCAGGACCTGGACACGCA +
Preference number: 4 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRHILGL*AGPGHA
Trigger: TGCGTGTCCAGGTCCTGCCCAGAGCCCGAGTATGTG...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAGTGTACGTCCCCTCCTaGGCGGCTGTCATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRVYVPS*AAVMLL
Trigger: CAGCAGCATGACAGCCGCCCAGGAGGGGACGTACAC...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGCCTCCGTTGGCTTGGTaGGCACGGGCACGATCATCG +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGPPLAW*ARARSS
Trigger: CGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGG...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACAGACCAGCAGGTCCTTaGGGTAGCCCTGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDRPAGP*GSPARS
Trigger: TGACCGTGCAGGGCTACCCCAAGGACCTGCTGGTCT...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGCCAACAGCGAGCAGTTaGGGAAGCCCACCTCCCGGC +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQPTASS*GSPPPG
Trigger: GCCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGG...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACTCGCTGTGGGGGAGTaGTTCCCACTCAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEALAVGE*FPLRGR
Trigger: TCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCTGGCATCCTCGCTGTaGGGGAGTGGTTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDLASSL*GSGSHS
Trigger: TGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAG...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCAAGCAGGACCACAGCCTaGCATCCTCGCTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEASRTTA*HPRCGG
Trigger: TCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCT...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCAAGCTCAGCGAGGGAGTaGGGCCCTGTGGCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEASSARE*GPVALA
Trigger: AGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCT...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp TCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCGCAGGGCCCCACCGTTaGAGAACCAGCGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: SEGEDQRMVRRALLSGRLAGPHR*RTSGPR
Trigger: CCGAGGTCCGCTGGTTCTTCAACGGTGGGGCCCTGC...GAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp AGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGGCAGGGCCCCACCGTTaGAGAACCAGCGGACCTCGG +
Preference number: 4 (lower is better)
Translates to: RTRGWCEELFSLDVSRVTAGPHR*RTSGPR
Trigger: CCGAGGTCCGCTGGTTCTTCAACGGTGGGGCCCTGC...CGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGTTAGGGCCTGCCCGTTaGAGGTCCACACATACTCGG +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPELGPAR*RSTHTR
Trigger: CCGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAA...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACTTAGGGCCTGCCCGTTaGAGGTCCACACATACTCGG +
Preference number: 4 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDLGPAR*RSTHTR
Trigger: CCGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAA...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGTCTGCAGGATGTAGGTaGCTGAGTGCCGGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMSAGCR*LSAGAG
Trigger: TCCTGCCCCGGCACTCAGGCACCTACATCCTGCAGA...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp AGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGGTTCCACCAGCGCTGTaGTGTTGGCCAAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SLASSLWGSGSHSEGEDQVPPAL*CWPRLW
Trigger: CCACAGTCTTGGCCAACAGCACAGCGCTGGTGGAAC...CTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTACCTCCCGGCCTGTGTaGGCGGGGCCTGCAATCCAG +
Preference number: 4 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSTSRPV*AGPAIQ
Trigger: CTGGATTGCAGGCCCCGCGCACACAGGCCGGGAGGT...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCCCCTTCGCTCGGCTaGGCAGGCTCCAGGGTGATA +
Preference number: 4 (lower is better)
Translates to: GRGPEDGAKSSSLWTSPGSPSLG*AGSRVI
Trigger: TATCACCCTGGAGCCTGCCCAGCCGAGCGAAGGGGA...CCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAGCCAAGACTGTGGGCTaGGCCAGGATCTCATGGACC +
Preference number: 4 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRAKTVG*ARISWT
Trigger: GGTCCATGAGATCCTGGCCCAGCCCACAGTCTTGGC...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGATGGCCACACGCTCTaGGCCAAAGTACACGGTCAG +
Preference number: 4 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRDGHTL*AKVHGQ
Trigger: CTGACCGTGTACTTTGGCCCAGAGCGTGTGGCCATC...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGTGGAATCCTGGAGGATaGCCACACGCTCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPEWNPGG*PHALGQ
Trigger: TTGGCCCAGAGCGTGTGGCCATCCTCCAGGATTCCA...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGTGCAGCCTGTGCGGGTaGTGGAATCCTGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGCSLCG*WNPGGW
Trigger: CCATCCTCCAGGATTCCACCACCCGCACAGGCTGCA...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCGGGCACGATCATCGTaGCAACTGCTGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDRARSS*QLLQQR
Trigger: TCTCTGCTGCAGCAGTTGCCACGATGATCGTGCCCG...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGGTCCTGGCCCTCCGTTaGCTTGGTGGGCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWVLALR*LGGHGH
Trigger: GTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGAC...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCATTAACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTCCTGGCCCTCCGTTaGCTTGGTGGGCACGGGCAC +
Preference number: 4 (lower is better)
Translates to: ALTRTFMASVAPQQLSEGVLALR*LGGHGH
Trigger: GTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGAC...TCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGTTAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS-3UTR TCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACTGCAGCAGAGAGCTTaGCCACGACTGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEALQQRA*PRLRQI
Trigger: GATCTGCCTCAGTCGTGGTCAAGCTCTCTGCTGCAG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGCTGCAGCAGAGAGCTTaGCCACGACTGAGGCAGATC +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMLQQRA*PRLRQI
Trigger: GATCTGCCTCAGTCGTGGTCAAGCTCTCTGCTGCAG...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GGCAGGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCGCGTTGAAGTCCCAGTaGTCGGACTCCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRRTAGPQPGILAVGEWFALKSQ*SDSLPG
Trigger: ACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGC...GAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGAGAGTCTCATCGCCTGTaGTCACGATGTAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PQPGILAVGEWFPLRGRGESHRL*SRCSWP
Trigger: TGGCCAGCTACATCGTGAGCACAGGCGATGAGACTC...TCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGAGTCTCATCGCCTGTaGTCACGATGTAGCTGGCCA +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPEESHRL*SRCSWP
Trigger: TGGCCAGCTACATCGTGAGCACAGGCGATGAGACTC...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGACCGTTCTTTAGGGCCTaGCCGTTGAAGGTCCACACA +
Preference number: 4 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRPFFRA*PLKVHT
Trigger: TGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGG...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGCCGTTCTTTAGGGCCTaGCCGTTGAAGGTCCACACA +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPEPFFRA*PLKVHT
Trigger: TGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGG...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGTGTTGGCCAAGACTGTaGGCTGGGCCAGGATCTCAT +
Preference number: 4 (lower is better)
Translates to: PGILAVGEWFPLRGRGPECWPRL*AGPGSH
Trigger: ATGAGATCCTGGCCCAGCCCACAGTCTTGGCCAACA...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGGATGGCCACACGCTCTaGGCCAAAGTACACGGTCAG +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGDGHTL*AKVHGQ
Trigger: CTGACCGTGTACTTTGGCCCAGAGCGTGTGGCCATC...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGTGGAATCCTGGAGGATaGCCACACGCTCTGGGCCAA +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMWNPGG*PHALGQ
Trigger: TTGGCCCAGAGCGTGTGGCCATCCTCCAGGATTCCA...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAAGCCTGTGCGGGTGGTaGAATCCTGGAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: LWGSGSHSEGEDQRMVRRSLCGW*NPGGWP
Trigger: TGGCCATCCTCCAGGATTCCACCACCCGCACAGGCT...TCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGAGCCTGTGCGGGTGGTaGAATCCTGGAGGATGGCCA +
Preference number: 4 (lower is better)
Translates to: GRGPEDGAKSSSLWTSPGSLCGW*NPGGWP
Trigger: TGGCCATCCTCCAGGATTCCACCACCCGCACAGGCT...CCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGCACATACTCGGGCTCTaGGCAGGACCTGGACACGCA +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQHILGL*AGPGHA
Trigger: TGCGTGTCCAGGTCCTGCCCAGAGCCCGAGTATGTG...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGGTCAGTGTTACGTCCTaGCCCTCCGTTGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGVSVTS*PSVGLV
Trigger: CACCAAGCCAACGGAGGGCCAGGACGTAACACTGAC...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTGTTCCTGACGGCAGCTaGCTGAGCAGCCGGTTGGGC +
Preference number: 4 (lower is better)
Translates to: DQRMVRRALLSGRLQGHAVPDGS*LSSRLG
Trigger: GCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAAC...AGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGCGAGGACCAGAGGATaGTGCGAAGAGCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRARTRG*CEELFS
Trigger: AGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGC...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CAACAGCTCAGCGAGGGAGTGGGGCCCTGTGGCTCTAGCTCTAGGGTGGAGGCACCGCAGGACCACGACTaGCGCAGAGTAAATGCTCAG +
Preference number: 4 (lower is better)
Translates to: QQLSEGVGPCGSSSRVEAPQDHD*RRVNAQ
Trigger: CTGAGCATTTACTCTGCGCCAGTCGTGGTCCTGCGG...TGCCTCCACCCTAGAGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCTGTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS-3UTR TCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGTCAGGAATGTGGCACTaGGGAGCAGCCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQSGMWH*GAASCT
Trigger: GGTACAGCTGGCTGCTCCTCAGTGCCACATTCCTGA...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp AGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCATGGACGACCAGCGTaGCGTTGTCCCCTTCGCTCG +
Preference number: 4 (lower is better)
Translates to: RTRGWCEELFSLDVSRVTHGRPA*RCPLRS
Trigger: CGAGCGAAGGGGACAACGTCACGCTGGTCGTCCATG...CGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAAGCGGCCAGTGTCTGTaGGGTTCAGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: LWGSGSHSEGEDQRMVRRSGQCL*GSASAP
Trigger: TGGTGCAGAAGCTGAACCTCACAGACACTGGCCGCT...TCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGGCGTTGAAGTCCCAGTaGTCGGACTCCCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GRGPEDGAKSSSLWTSPGALKSQ*SDSLPG
Trigger: ACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGC...CCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGCATCGTGGCAACTGCTaGAGCAGAGAGCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMHRGNC*SRELDH
Trigger: GTGGTCAAGCTCTCTGCTGCAGCAGTTGCCACGATG...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGCATCGTGGCAACTGCTaGAGCAGAGAGCTTGACCAC +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGHRGNC*SRELDH
Trigger: GTGGTCAAGCTCTCTGCTGCAGCAGTTGCCACGATG...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGTGAGGTTCAGCTTCTaGACCAACAGCGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: QPGILAVGEWFPLRGRGPVRFSF*TNSEQL
Trigger: CAACTGCTCGCTGTTGGTGCAGAAGCTGAACCTCAC...TGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGCGGGTGGTGGAATCCTaGAGGATGGCCACACGCTCT +
Preference number: 4 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTRVVES*RMATRS
Trigger: AGAGCGTGTGGCCATCCTCCAGGATTCCACCACCCG...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTCCTCCGTTGGCTTGGTaGGCACGGGCACGATCATCG +
Preference number: 4 (lower is better)
Translates to: DQRMVRRALLSGRLQGHAPPLAW*ARARSS
Trigger: CGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGG...AGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGTCAGTGTTACGTCCTaGCCCTCCGTTGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LWGSGSHSEGEDQRMVRRVSVTS*PSVGLV
Trigger: CACCAAGCCAACGGAGGGCCAGGACGTAACACTGAC...TCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTAGACCAGCAGGTCCTTaGGGTAGCCCTGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: GEDQRMVRRALLSGRLQGRPAGP*GSPARS
Trigger: TGACCGTGCAGGGCTACCCCAAGGACCTGCTGGTCT...ACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp ACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGGGGAAGAGCTCTTCTCTCTaGACGTCTCCAGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: TRTFMASVAPQQLSEGVGKSSSL*TSPGSR
Trigger: GCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTT...CCCCACTCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTCTCGCTGTGGGGGAGTaGTTCCCACTCAGAGGGCGA +
Preference number: 4 (lower is better)
Translates to: DQRMVRRALLSGRLQGHALAVGE*FPLRGR
Trigger: TCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAG...AGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTAGCAGGACCACAGCCTaGCATCCTCGCTGTGGGGGA +
Preference number: 4 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSSRTTA*HPRCGG
Trigger: TCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCT...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGAGCTCAGCGAGGGAGTaGGGCCCTGTGGCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: VPTQRARTRGWCEELFSLSSARE*GPVALA
Trigger: AGCTAGAGCCACAGGGCCCCACTCCCTCGCTGAGCT...CAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGTCTGCAACTGCCTGTTaGAGGTCTGCAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMSATAC*RSAGCR
Trigger: CCTACATCCTGCAGACCTTCAACAGGCAGTTGCAGA...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGACCTCGGTCTGCAACTaGCTGTTGAAGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GRGPEDGAKSSSLWTSPGTSVCN*LLKVCR
Trigger: CCTGCAGACCTTCAACAGGCAGTTGCAGACCGAGGT...CCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGGTTCCACCAGCGCTGTaGTGTTGGCCAAGACTGTGG +
Preference number: 4 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTVPPAL*CWPRLW
Trigger: CCACAGTCTTGGCCAACAGCACAGCGCTGGTGGAAC...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGAGGTTCAGCTTCTaGACCAACAGCGAGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMVRFSF*TNSEQL
Trigger: CAACTGCTCGCTGTTGGTGCAGAAGCTGAACCTCAC...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGTCTCAGTCTTGCCCTaGACTGTGACAGTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: QPGILAVGEWFPLRGRGPVSVLP*TVTVLS
Trigger: ACTCAAGACTGTCACAGTGCAGGGCAAGACTGAGAC...TGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTCTGGCATCCTCGCTGTaGGGGAGTGGTTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: DQRMVRRALLSGRLQGHALASSL*GSGSHS
Trigger: TGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAG...AGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTTGGAGATGGTGGCGTTaGAGTCCCAGTGCTCGGACT +
Preference number: 4 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSWRWWR*SPSART
Trigger: AGTCCGAGCACTGGGACTTCAACGCCACCATCTCCA...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp GTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGTCAGGAATGTGGCACTaGGGAGCAGCCAGCTGTACC +
Preference number: 4 (lower is better)
Translates to: VPTQRARTRGWCEELFSLSGMWH*GAASCT
Trigger: GGTACAGCTGGCTGCTCCTCAGTGCCACATTCCTGA...CAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGTCTGCAACTGCCTGTTaGAGGTCTGCAGGATGTAGG +
Preference number: 4 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQSATAC*RSAGCR
Trigger: CCTACATCCTGCAGACCTTCAACAGGCAGTTGCAGA...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp TCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCAGCGGCCAGTGTCTGTaGGGTTCAGCTTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SEGEDQRMVRRALLSGRLSGQCL*GSASAP
Trigger: TGGTGCAGAAGCTGAACCTCACAGACACTGGCCGCT...GAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGACCTCGGTCTGCAACTaGCTGTTGAAGGTCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTTSVCN*LLKVCR
Trigger: CCTGCAGACCTTCAACAGGCAGTTGCAGACCGAGGT...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp CTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGATCATCGTGGCAACTaGTGCAGCAGAGAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: LWGSGSHSEGEDQRMVRRDHRGN*CSRELD
Trigger: GTCAAGCTCTCTGCTGCAGCAGTTGCCACGATGATC...TCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp GGCAGGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCGTCTCAGTCTTGCCCTaGACTGTGACAGTCTTGAGT +
Preference number: 4 (lower is better)
Translates to: GRRTAGPQPGILAVGEWFVSVLP*TVTVLS
Trigger: ACTCAAGACTGTCACAGTGCAGGGCAAGACTGAGAC...GAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCATTAACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGACGGGCACGATCATCGTaGCAACTGCTGCAGCAGAGA +
Preference number: 4 (lower is better)
Translates to: ALTRTFMASVAPQQLSEGRARSS*QLLQQR
Trigger: TCTCTGCTGCAGCAGTTGCCACGATGATCGTGCCCG...TCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGTTAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS-3UTR CCA 90 bp GGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTGCGAGGACCAGAGGATaGTGCGAAGAGCTCTTCTCT +
Preference number: 4 (lower is better)
Translates to: GEDQRMVRRALLSGRLQGARTRG*CEELFS
Trigger: AGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGC...ACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTTGCTCACGATGTAGCTaGCCACCAGGTATGACACGC +
Preference number: 4 (lower is better)
Translates to: DQRMVRRALLSGRLQGHACSRCS*PPGMTR
Trigger: GCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCA...AGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCTGCTCACGATGTAGCTaGCCACCAGGTATGACACGC +
Preference number: 4 (lower is better)
Translates to: SEGEDQRMVRRALLSGRLCSRCS*PPGMTR
Trigger: GCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCA...GAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGATAGCAGGGTCTTaGTGTTCTTCGCAATACATG +
Preference number: 4 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDQIAGS*CSSQYM
Trigger: CATGTATTGCGAAGAACACCAAGACCCTGCTATCTG...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTAAGAGCTCTTCTCTCTaGACGTCTCCAGGGTCACGC +
Preference number: 4 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSKSSSL*TSPGSR
Trigger: GCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTT...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR GCA 90 bp AGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGGATCATCGTGGCAACTaGTGCAGCAGAGAGCTTGAC +
Preference number: 4 (lower is better)
Translates to: RTRGWCEELFSLDVSRVTDHRGN*CSRELD
Trigger: GTCAAGCTCTCTGCTGCAGCAGTTGCCACGATGATC...CGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGATGTTGAGGTGGTCTTaGCCGTTCTTTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VPTQRARTRGWCEELFSLMLRWS*PFFRAC
Trigger: GCAGGCCCTAAAGAACGGCCAAGACCACCTCAACAT...CAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp TCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCATGTTGAGGTGGTCTTaGCCGTTCTTTAGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SEGEDQRMVRRALLSGRLMLRWS*PFFRAC
Trigger: GCAGGCCCTAAAGAACGGCCAAGACCACCTCAACAT...GAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCTGCTGATGTTGAGGTaGTCTTGGCCGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GEDQRMVRRALLSGRLQGLLMLR*SWPFFR
Trigger: CCTAAAGAACGGCCAAGACCACCTCAACATCAGCAG...ACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGCAGATAGCAGGGTCTTaGTGTTCTTCGCAATACATG +
Preference number: 4 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMQIAGS*CSSQYM
Trigger: CATGTATTGCGAAGAACACCAAGACCCTGCTATCTG...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CCA 90 bp GTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGCTGCTGATGTTGAGGTaGTCTTGGCCGTTCTTTAGG +
Preference number: 4 (lower is better)
Translates to: VPTQRARTRGWCEELFSLLLMLR*SWPFFR
Trigger: CCTAAAGAACGGCCAAGACCACCTCAACATCAGCAG...CAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR TCA 90 bp GTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGTGGACAAATACTGAATaGGCACCTATTGTTTGCCAG +
Preference number: 4 (lower is better)
Translates to: VPTQRARTRGWCEELFSLWTNTE*APIVCQ
Trigger: CTGGCAAACAATAGGTGCTCATTCAGTATTTGTCCA...CAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS TCA 90 bp GCCCACCTCCCGGCCTGTGTGCGCGGGGCCTGCAATCCAGGTTCCTaGCGGCAGCTGGCTGAGCAGCCGGTTGGGCTCGGAGGCAGGCCC +
Preference number: 5 (lower is better)
Translates to: AHLPACVRGACNPGS*RQLAEQPVGLGGRP
Trigger: GGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCACACAGGCCGGGAGGTGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp CGGCCTGTGTGCGCGGGGCCTGCAATCCAGGTTCCTGACGGCAGCTaGCTGAGCAGCCGGTTGGGCTCGGAGGCAGGCCCGCGGTACCAG +
Preference number: 5 (lower is better)
Translates to: RPVCAGPAIQVPDGS*LSSRLGSEAGPRYQ
Trigger: CTGGTACCGCGGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCACACAGGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 90 bp CTGTGTGCGCGGGGCCTGCAATCCAGGTTCCTGACGGCAGCTGGCTaGGCAGCCGGTTGGGCTCGGAGGCAGGCCCGCGGTACCAGGCGT +
Preference number: 5 (lower is better)
Translates to: LCARGLQSRFLTAAG*AAGWARRQARGTRR
Trigger: ACGCCTGGTACCGCGGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCACACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGATGGCTGAGCAGCCGGTaGGGCTCGGAGGCAGGCCCG +
Preference number: 5 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRWLSSR*GSEAGP
Trigger: CGGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCA...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 90 bp TGCACCAACAGCGAGCAGTTGGGGAAGCCCACCTCCCGGCCTGTGTaGGCGGGGCCTGCAATCCAGGTTCCTGACGGCAGCTGGCTGAGC +
Preference number: 5 (lower is better)
Translates to: CTNSEQLGKPTSRPV*AGPAIQVPDGSWLS
Trigger: GCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCACACAGGCCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGGTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp GCTCGGAGGCAGGCCCGCGGTACCAGGCGTAGACCAGCAGGTCCTTaGGGTAGCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTTG +
Preference number: 5 (lower is better)
Translates to: ARRQARGTRRRPAGP*GSPARSVLRPGPPL
Trigger: CAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGCTACCCCAAGGACCTGCTGGTCTACGCCTGGTACCGCGGGCCTGCCTCCGAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACGGACTCCCTTCCTGGTaGGGGCTCGGCTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDGLPSW*GLGSVC
Trigger: GCAGACGGAGCCGAGCCCCAACCAGGAAGGGAGTCC...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GGCAGGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCTGGCCCTCCGTTGGCTaGGTGGGCACGGGCACGATC +
Preference number: 5 (lower is better)
Translates to: GRRTAGPQPGILAVGEWFWPSVG*VGTGTI
Trigger: GATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCA...GAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGCGTCCTGGCCCTCCGTaGGCTTGGTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQRPGPP*AWWARA
Trigger: TGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACG...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGCGTCCTGGCCCTCCGTaGGCTTGGTGGGCACGGGCA +
Preference number: 5 (lower is better)
Translates to: GRGPEDGAKSSSLWTSPGRPGPP*AWWARA
Trigger: TGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACG...CCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTGGCTGAGCAGCCGGTaGGGCTCGGAGGCAGGCCCG +
Preference number: 5 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTWLSSR*GSEAGP
Trigger: CGGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCA...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp CTTGGAGATGGTGGCGTTGAAGTCCCAGTGCTCGGACTCCCTTCCTaGTTGGGGCTCGGCTCCGTCTGCCGCAGGACCACGACTGGCGCA +
Preference number: 5 (lower is better)
Translates to: LGDGGVEVPVLGLPS*LGLGSVCRRTTTGA
Trigger: TGCGCCAGTCGTGGTCCTGCGGCAGACGGAGCCGAGCCCCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS-3UTR CAA 90 bp CTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGATGGCCCTCCGTTGGCTaGGTGGGCACGGGCACGATC +
Preference number: 5 (lower is better)
Translates to: LWGSGSHSEGEDQRMVRRWPSVG*VGTGTI
Trigger: GATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCA...TCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGACCAACAGCGAGCAGTaGGGGAAGCCCACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: ASSLWGSGSHSEGEDQRMTNSEQ*GKPTSR
Trigger: CCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGGT...CATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp CTTGGGGTAGCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTTaGCTTGGTGGGCACGGGCACGATCATCGTGGCAACTGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: LGVALHGQCYVLALR*LGGHGHDHRGNCCS
Trigger: GCTGCAGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGCTACCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGGGCAGGGCCCCACCGTaGAAGAACCAGCGGACCTCG +
Preference number: 5 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTGRAPP*KNQRTS
Trigger: CGAGGTCCGCTGGTTCTTCAACGGTGGGGCCCTGCC...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACAAGTACACGGTCAGGTaGATGGGCTCGCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: HSLASSLWGSGSHSEGEDKYTVR*MGSLRL
Trigger: CAGCCGCAGCGAGCCCATCAACCTGACCGTGTACTT...GTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 90 bp CATCGCCTGTGCTCACGATGTAGCTGGCCACCAGGTATGACACGCTaGGTGTGGGCCCCGCATACCAGCTGTAGGCGAGCAGTTCCCCCG +
Preference number: 5 (lower is better)
Translates to: HRLCSRCSWPPGMTR*VWAPHTSCRRAVPP
Trigger: CGGGGGAACTGCTCGCCTACAGCTGGTATGCGGGGCCCACACTCAGCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCACAGGCGATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 90 bp CTCGGTCTGCAACTGCCTGTTGAAGGTCTGCAGGATGTAGGTGCCTaGGTGCCGGGGCAGGATGCCCTGGATGTCCAGGCTGCCATCGGG +
Preference number: 5 (lower is better)
Translates to: LGLQLPVEGLQDVGA*VPGQDALDVQAAIG
Trigger: CCCGATGGCAGCCTGGACATCCAGGGCATCCTGCCCCGGCACTCAGGCACCTACATCCTGCAGACCTTCAACAGGCAGTTGCAGACCGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 90 bp GGACCTGCACGTGTCCGTAGCCCACCTCGGTCTGCAACTGCCTGTTaGAGGTCTGCAGGATGTAGGTGCCTGAGTGCCGGGGCAGGATGC +
Preference number: 5 (lower is better)
Translates to: GPARVRSPPRSATAC*RSAGCRCLSAGAGC
Trigger: GCATCCTGCCCCGGCACTCAGGCACCTACATCCTGCAGACCTTCAACAGGCAGTTGCAGACCGAGGTGGGCTACGGACACGTGCAGGTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp GAAAGCCCATGGACGACCAGCGTGACGTTGTCCCCTTCGCTCGGCTaGGCAGGCTCCAGGGTGATAGAGATCTCGGCCCCCACATTCAGG +
Preference number: 5 (lower is better)
Translates to: ESPWTTSVTLSPSLG*AGSRVIEISAPTFR
Trigger: CCTGAATGTGGGGGCCGAGATCTCTATCACCCTGGAGCCTGCCCAGCCGAGCGAAGGGGACAACGTCACGCTGGTCGTCCATGGGCTTTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp AGCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTTGGCTTGGTaGGCACGGGCACGATCATCGTGGCAACTGCTGCAGCAGAGAGCT +
Preference number: 5 (lower is better)
Translates to: SPARSVLRPGPPLAW*ARARSSWQLLQQRA
Trigger: AGCTCTCTGCTGCAGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp GGTAGCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTTGGCTTaGTGGGCACGGGCACGATCATCGTGGCAACTGCTGCAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: GSPARSVLRPGPPLA*WARARSSWQLLQQR
Trigger: TCTCTGCTGCAGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGCTACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGGGACTCCCTTCCTGGTaGGGGCTCGGCTCCGTCTGC +
Preference number: 5 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWGLPSW*GLGSVC
Trigger: GCAGACGGAGCCGAGCCCCAACCAGGAAGGGAGTCC...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTGGCAGGGCCCCACCGTaGAAGAACCAGCGGACCTCG +
Preference number: 5 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSGRAPP*KNQRTS
Trigger: CGAGGTCCGCTGGTTCTTCAACGGTGGGGCCCTGCC...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAAGTACACGGTCAGGTaGATGGGCTCGCTGCGGCTG +
Preference number: 5 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRKYTVR*MGSLRL
Trigger: CAGCCGCAGCGAGCCCATCAACCTGACCGTGTACTT...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 90 bp TTCACCCCAAACCGAGTCTTGGAGATGGTGGCGTTGAAGTCCCAGTaGTCGGACTCCCTTCCTGGTTGGGGCTCGGCTCCGTCTGCCGCA +
Preference number: 5 (lower is better)
Translates to: FTPNRVLEMVALKSQ*SDSLPGWGSAPSAA
Trigger: TGCGGCAGACGGAGCCGAGCCCCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGTGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAACCCCAAACCGAGTCTaGGAGATGGTGGCGTTGAAG +
Preference number: 5 (lower is better)
Translates to: AWHPRCGGVVPTQRARTRTPNRV*EMVALK
Trigger: CTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGT...TCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGACCAGCGTGACGTaGTCCCCTTCGCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWTTSVT*SPSLGW
Trigger: CCAGCCGAGCGAAGGGGACAACGTCACGCTGGTCGT...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTACGACCAGCGTGACGTaGTCCCCTTCGCTCGGCTGG +
Preference number: 5 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSTTSVT*SPSLGW
Trigger: CCAGCCGAGCGAAGGGGACAACGTCACGCTGGTCGT...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGTCATGCTGCTGATGTaGAGGTGGTCTTGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: PGILAVGEWFPLRGRGPEVMLLM*RWSWPF
Trigger: GAACGGCCAAGACCACCTCAACATCAGCAGCATGAC...CTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACCAACAGCGAGCAGTaGGGGAAGCCCACCTCCCGG +
Preference number: 5 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWTNSEQ*GKPTSR
Trigger: CCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGGT...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 90 bp CAGCGCCATCTTTCACCCCAAACCGAGTCTTGGAGATGGTGGCGTTaGAGTCCCAGTGCTCGGACTCCCTTCCTGGTTGGGGCTCGGCTC +
Preference number: 5 (lower is better)
Translates to: QRHLSPQTESWRWWR*SPSARTPFLVGARL
Trigger: GAGCCGAGCCCCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGTGAAAGATGGCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 90 bp AGGAGTCTCATCGCCTGTGCTCACGATGTAGCTGGCCACCAGGTATaGCACGCTGAGTGTGGGCCCCGCATACCAGCTGTAGGCGAGCAG +
Preference number: 5 (lower is better)
Translates to: RSLIACAHDVAGHQV*HAECGPRIPAVGEQ
Trigger: CTGCTCGCCTACAGCTGGTATGCGGGGCCCACACTCAGCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCACAGGCGATGAGACTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGGTGTTGAAGTCAACTTaGATGGTGCAGCCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: AGPQPGILAVGEWFPLRGVLKST*MVQPVR
Trigger: CCGCACAGGCTGCACCATCAAAGTTGACTTCAACAC...CCCTCTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGATTTAGGGCCTGCCCGTaGAAGGTCCACACATACTCG +
Preference number: 5 (lower is better)
Translates to: SLWGSGSHSEGEDQRMVRFRACP*KVHTYS
Trigger: CGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAAA...TCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACAGCGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GGCAGGAGAACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCTCCAGTGTCTCAGTCTaGCCCTGCACTGTGACAGTC +
Preference number: 5 (lower is better)
Translates to: GRRTAGPQPGILAVGEWFSSVSV*PCTVTV
Trigger: GACTGTCACAGTGCAGGGCAAGACTGAGACACTGGA...GAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTTCTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 90 bp TGTGGGGGAGTGGTTCCCACTCAGAGGGCGAGGACCAGAGGATGGTaGGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGCTGTTA +
Preference number: 5 (lower is better)
Translates to: CGGVVPTQRARTRGW*EELFSLDVSRVTLL
Trigger: TAACAGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAACCACTCCCCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp GTCCCCTCCTGGGCGGCTGTCATGCTGCTGATGTTGAGGTGGTCTTaGCCGTTCTTTAGGGCCTGCCCGTTGAAGGTCCACACATACTCG +
Preference number: 5 (lower is better)
Translates to: VPSWAAVMLLMLRWS*PFFRACPLKVHTYS
Trigger: CGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAACATCAGCAGCATGACAGCCGCCCAGGAGGGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp GTGTACGTCCCCTCCTGGGCGGCTGTCATGCTGCTGATGTTGAGGTaGTCTTGGCCGTTCTTTAGGGCCTGCCCGTTGAAGGTCCACACA +
Preference number: 5 (lower is better)
Translates to: VYVPSWAAVMLLMLR*SWPFFRACPLKVHT
Trigger: TGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAACATCAGCAGCATGACAGCCGCCCAGGAGGGGACGTACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTTGGAGATGGTGGCGTaGAAGTCCCAGTGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: PLRGRGPEDGAKSSSLWTLEMVA*KSQCSD
Trigger: GTCCGAGCACTGGGACTTCAACGCCACCATCTCCAA...CGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 90 bp GTCATGCTGCTGATGTTGAGGTGGTCTTGGCCGTTCTTTAGGGCCTaGCCGTTGAAGGTCCACACATACTCGGGCTCTGGGCAGGACCTG +
Preference number: 5 (lower is better)
Translates to: VMLLMLRWSWPFFRA*PLKVHTYSGSGQDL
Trigger: CAGGTCCTGCCCAGAGCCCGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAACATCAGCAGCATGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp AGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGTTGGAGATGGTGGCGTaGAAGTCCCAGTGCTCGGAC +
Preference number: 5 (lower is better)
Translates to: RTRGWCEELFSLDVSRVTLEMVA*KSQCSD
Trigger: GTCCGAGCACTGGGACTTCAACGCCACCATCTCCAA...CGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp AACAGCAGGACCACAGCCTGGCATCCTCGCTGTGGGGGAGTGGTTCCCACTCAGAGGGTGAGGGACGTGTaGAAGTCAACTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: NSRTTAWHPRCGGVVPTQRVRDV*KSTLMV
Trigger: CACCATCAAAGTTGACTTCAACACGTCCCTCACCCT...CTGAGTGGGAACCACTCCCCCACAGCGAGGATGCCAGGCTGTGGTCCTGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGTTTAGGGCCTGCCCGTaGAAGGTCCACACATACTCG +
Preference number: 5 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWFRACP*KVHTYS
Trigger: CGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAAA...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp AGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCCAGGGTCACGGTCATGCTGCTGATGTaGAGGTGGTCTTGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: RTRGWCEELFSLDVSRVTVMLLM*RWSWPF
Trigger: GAACGGCCAAGACCACCTCAACATCAGCAGCATGAC...CGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp TTCCCACTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGTCCAGTGTCTCAGTCTaGCCCTGCACTGTGACAGTC +
Preference number: 5 (lower is better)
Translates to: FPLRGRGPEDGAKSSSLWSSVSV*PCTVTV
Trigger: GACTGTCACAGTGCAGGGCAAGACTGAGACACTGGA...CCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAGTGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp TTGAAGTCAACTTTGATGGTGCAGCCTGTGCGGGTGGTGGAATCCTaGAGGATGGCCACACGCTCTGGGCCAAAGTACACGGTCAGGTTG +
Preference number: 5 (lower is better)
Translates to: LKSTLMVQPVRVVES*RMATRSGPKYTVRL
Trigger: CAACCTGACCGTGTACTTTGGCCCAGAGCGTGTGGCCATCCTCCAGGATTCCACCACCCGCACAGGCTGCACCATCAAAGTTGACTTCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 90 bp AGCAGGGTCTTGGTGTTCTTCGCAATACATGTGTACGTCCCCTCCTaGGCGGCTGTCATGCTGCTGATGTTGAGGTGGTCTTGGCCGTTC +
Preference number: 5 (lower is better)
Translates to: SRVLVFFAIHVYVPS*AAVMLLMLRWSWPF
Trigger: GAACGGCCAAGACCACCTCAACATCAGCAGCATGACAGCCGCCCAGGAGGGGACGTACACATGTATTGCGAAGAACACCAAGACCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp GCATTAACCAGGACGTTTATGGCCTCGGTGGCTCCCCAACAGCTCAGCGAGGGAGTGTTGAAGTCAACTTaGATGGTGCAGCCTGTGCGG +
Preference number: 5 (lower is better)
Translates to: ALTRTFMASVAPQQLSEGVLKST*MVQPVR
Trigger: CCGCACAGGCTGCACCATCAAAGTTGACTTCAACAC...TCCCTCGCTGAGCTGTTGGGGAGCCACCGAGGCCATAAACGTCCTGGTTAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS-3UTR CAA 90 bp TCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTCAGGGTGAGGGACGTGTaGAAGTCAACTTTGATGGTG +
Preference number: 5 (lower is better)
Translates to: SEGEDQRMVRRALLSGRLRVRDV*KSTLMV
Trigger: CACCATCAAAGTTGACTTCAACACGTCCCTCACCCT...GAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS-3UTR CAA 90 bp CTCAGAGGGCGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTGGACGTCTATGAGCACCTATTGTTaGCCAGGTGCTGTTCTAGGC +
Preference number: 5 (lower is better)
Translates to: LRGRGPEDGAKSSSLWTSMSTYC*PGAVLG
Trigger: GCCTAGAACAGCACCTGGCAAACAATAGGTGCTCAT...AGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCGCCCTCTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS CAA 72 bp AGGCCCAGGCGGAGAGCGACGGGCAGGGCCCCACCGTaGAAGAACCAGCGGACCTCGGCGGTGGGGCTGGGG +
Preference number: 6 (lower is better)
Translates to: RPRRRATGRAPP*KNQRTSAVGLG
Trigger: CCCCAGCCCCACCGCCGAGGTCCGCTGGTTCTTCAACGGTGGGGCCCTGCCCGTCGCTCTCCGCCTGGGCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp AGGCTGCCATCGGGGCGCACAGCCTCCCGCCCCGTGTaGGCCGGGCCAGGAGTCTCATCGCCTGTGCTCACG +
Preference number: 6 (lower is better)
Translates to: RLPSGRTASRPV*AGPGVSSPVLT
Trigger: CGTGAGCACAGGCGATGAGACTCCTGGCCCGGCCCACACGGGGCGGGAGGCTGTGCGCCCCGATGGCAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 72 bp CGGGGCCTGCAATCCAGGTTCCTGACGGCAGCTGGCTaGGCAGCCGGTTGGGCTCGGAGGCAGGCCCGCGGT +
Preference number: 6 (lower is better)
Translates to: RGLQSRFLTAAG*AAGWARRQARG
Trigger: ACCGCGGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 72 bp CCTCACACTGATAGGCGCCGGCCTCCTCCCGGCGGATaGCATGCCTGGCCAGCACCCGGCCGTCAGGGGACA +
Preference number: 6 (lower is better)
Translates to: PHTDRRRPPPGG*HAWPAPGRQGT
Trigger: TGTCCCCTGACGGCCGGGTGCTGGCCAGGCATGGCATCCGCCGGGAGGAGGCCGGCGCCTATCAGTGTGAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp TGCGCGGGGCCTGCAATCCAGGTTCCTGACGGCAGCTaGCTGAGCAGCCGGTTGGGCTCGGAGGCAGGCCCG +
Preference number: 6 (lower is better)
Translates to: CAGPAIQVPDGS*LSSRLGSEAGP
Trigger: CGGGCCTGCCTCCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 72 bp CCGGCCTGTGTGCGCGGGGCCTGCAATCCAGGTTCCTaGCGGCAGCTGGCTGAGCAGCCGGTTGGGCTCGGA +
Preference number: 6 (lower is better)
Translates to: PACVRGACNPGS*RQLAEQPVGLG
Trigger: TCCGAGCCCAACCGGCTGCTCAGCCAGCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCACACAGGCCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 72 bp AGCGAGCAGTTGGGGAAGCCCACCTCCCGGCCTGTGTaGGCGGGGCCTGCAATCCAGGTTCCTGACGGCAGC +
Preference number: 6 (lower is better)
Translates to: SEQLGKPTSRPV*AGPAIQVPDGS
Trigger: GCTGCCGTCAGGAACCTGGATTGCAGGCCCCGCGCACACAGGCCGGGAGGTGGGCTTCCCCAACTGCTCGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp GGTGGCGTTGAAGTCCCAGTGCTCGGACTCCCTTCCTaGTTGGGGCTCGGCTCCGTCTGCCGCAGGACCACG +
Preference number: 6 (lower is better)
Translates to: GGVEVPVLGLPS*LGLGSVCRRTT
Trigger: CGTGGTCCTGCGGCAGACGGAGCCGAGCCCCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587331.7
CDS TCA 72 bp CGAGCAGTTCCCCCGAAAGCCCATGGACGACCAGCGTaGCGTTGTCCCCTTCGCTCGGCTGGGCAGGCTCCA +
Preference number: 6 (lower is better)
Translates to: RAVPPKAHGRPA*RCPLRSAGQAP
Trigger: TGGAGCCTGCCCAGCCGAGCGAAGGGGACAACGTCACGCTGGTCGTCCATGGGCTTTCGGGGGAACTGCTCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 72 bp GCCCCGTGTGGGCCGGGCCAGGAGTCTCATCGCCTGTaGTCACGATGTAGCTGGCCACCAGGTATGACACGC +
Preference number: 6 (lower is better)
Translates to: APCGPGQESHRL*SRCSWPPGMTR
Trigger: GCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCACAGGCGATGAGACTCCTGGCCCGGCCCACACGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 72 bp TCTGCAGGATGTAGGTGCCTGAGTGCCGGGGCAGGATaGCCTGGATGTCCAGGCTGCCATCGGGGCGCACAG +
Preference number: 6 (lower is better)
Translates to: SAGCRCLSAGAG*PGCPGCHRGAQ
Trigger: CTGTGCGCCCCGATGGCAGCCTGGACATCCAGGGCATCCTGCCCCGGCACTCAGGCACCTACATCCTGCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp TGGACGACCAGCGTGACGTTGTCCCCTTCGCTCGGCTaGGCAGGCTCCAGGGTGATAGAGATCTCGGCCCCC +
Preference number: 6 (lower is better)
Translates to: WTTSVTLSPSLG*AGSRVIEISAP
Trigger: GGGGGCCGAGATCTCTATCACCCTGGAGCCTGCCCAGCCGAGCGAAGGGGACAACGTCACGCTGGTCGTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp CAGGCCCGCGGTACCAGGCGTAGACCAGCAGGTCCTTaGGGTAGCCCTGCACGGTCAGTGTTACGTCCTGGC +
Preference number: 6 (lower is better)
Translates to: QARGTRRRPAGP*GSPARSVLRPG
Trigger: GCCAGGACGTAACACTGACCGTGCAGGGCTACCCCAAGGACCTGCTGGTCTACGCCTGGTACCGCGGGCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp AGTTCCCCCGAAAGCCCATGGACGACCAGCGTGACGTaGTCCCCTTCGCTCGGCTGGGCAGGCTCCAGGGTG +
Preference number: 6 (lower is better)
Translates to: SSPESPWTTSVT*SPSLGWAGSRV
Trigger: CACCCTGGAGCCTGCCCAGCCGAGCGAAGGGGACAACGTCACGCTGGTCGTCCATGGGCTTTCGGGGGAACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp CGGCCAGTGTCTGTGAGGTTCAGCTTCTGCACCAACAGCGAGCAGTaGGGGAAGCCCACCTCCCGGCCTGTGTGCGCGGGGCCTGCAATC +
Preference number: 6 (lower is better)
Translates to: RPVSVRFSFCTNSEQ*GKPTSRPVCAGPAI
Trigger: GATTGCAGGCCCCGCGCACACAGGCCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGGTGCAGAAGCTGAACCTCACAGACACTGGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp GGCCTGCCCGTTGAAGGTCCACACATACTCGGGCTCTaGGCAGGACCTGGACACGCACCACAGGGTGAGGGA +
Preference number: 6 (lower is better)
Translates to: GLPVEGPHILGL*AGPGHAPQGEG
Trigger: TCCCTCACCCTGTGGTGCGTGTCCAGGTCCTGCCCAGAGCCCGAGTATGTGTGGACCTTCAACGGGCAGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp GCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTTaGCTTGGTGGGCACGGGCACGATCATCGTGGCAAC +
Preference number: 6 (lower is better)
Translates to: ALHGQCYVLALR*LGGHGHDHRGN
Trigger: GTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp TCTGTGAGGTTCAGCTTCTGCACCAACAGCGAGCAGTaGGGGAAGCCCACCTCCCGGCCTGTGTGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: SVRFSFCTNSEQ*GKPTSRPVCAG
Trigger: CCCCGCGCACACAGGCCGGGAGGTGGGCTTCCCCAACTGCTCGCTGTTGGTGCAGAAGCTGAACCTCACAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp CCTTGGGGTAGCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTaGGCTTGGTGGGCACGGGCACGATCATCGTGGCAACTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: PWGSPARSVLRPGPP*AWWARARSSWQLLQ
Trigger: CTGCAGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGCTACCCCAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp CGGTCAGTGTTACGTCCTGGCCCTCCGTTGGCTTGGTaGGCACGGGCACGATCATCGTGGCAACTGCTGCAG +
Preference number: 6 (lower is better)
Translates to: RSVLRPGPPLAW*ARARSSWQLLQ
Trigger: CTGCAGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp GCACGGTCAGTGTTACGTCCTGGCCCTCCGTTGGCTTaGTGGGCACGGGCACGATCATCGTGGCAACTGCTG +
Preference number: 6 (lower is better)
Translates to: ARSVLRPGPPLA*WARARSSWQLL
Trigger: CAGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp AGCCCTGCACGGTCAGTGTTACGTCCTGGCCCTCCGTaGGCTTGGTGGGCACGGGCACGATCATCGTGGCAA +
Preference number: 6 (lower is better)
Translates to: SPARSVLRPGPP*AWWARARSSWQ
Trigger: TTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp CACATAAGGCGCAGGGTGTCTCGACGTTCCACCAGCGCTGTGCTGTaGGCCAAGACTGTGGGCTGGGCCAGGATCTCATGGACCTGCACG +
Preference number: 6 (lower is better)
Translates to: HIRRRVSRRSTSAVL*AKTVGWARISWTCT
Trigger: CGTGCAGGTCCATGAGATCCTGGCCCAGCCCACAGTCTTGGCCAACAGCACAGCGCTGGTGGAACGTCGAGACACCCTGCGCCTTATGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 72 bp CGTGTCCGTAGCCCACCTCGGTCTGCAACTGCCTGTTaGAGGTCTGCAGGATGTAGGTGCCTGAGTGCCGGG +
Preference number: 6 (lower is better)
Translates to: RVRSPPRSATAC*RSAGCRCLSAG
Trigger: CCCGGCACTCAGGCACCTACATCCTGCAGACCTTCAACAGGCAGTTGCAGACCGAGGTGGGCTACGGACACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS GCA 72 bp AACCGAGTCTTGGAGATGGTGGCGTTGAAGTCCCAGTaGTCGGACTCCCTTCCTGGTTGGGGCTCGGCTCCG +
Preference number: 6 (lower is better)
Translates to: NRVLEMVALKSQ*SDSLPGWGSAP
Trigger: CGGAGCCGAGCCCCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp GACGTTCCACCAGCGCTGTGCTGTTGGCCAAGACTGTaGGCTGGGCCAGGATCTCATGGACCTGCACGTGTC +
Preference number: 6 (lower is better)
Translates to: DVPPALCCWPRL*AGPGSHGPARV
Trigger: GACACGTGCAGGTCCATGAGATCCTGGCCCAGCCCACAGTCTTGGCCAACAGCACAGCGCTGGTGGAACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp GCAGGGTGTCTCGACGTTCCACCAGCGCTGTGCTGTTaGCCAAGACTGTGGGCTGGGCCAGGATCTCATGGA +
Preference number: 6 (lower is better)
Translates to: AGCLDVPPALCC*PRLWAGPGSHG
Trigger: TCCATGAGATCCTGGCCCAGCCCACAGTCTTGGCCAACAGCACAGCGCTGGTGGAACGTCGAGACACCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp CGAGGACCAGAGGATGGTGCGAAGAGCTCTTCTCTCTaGACGTCTCCAGGGTCACGCTGTTACCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: RGPEDGAKSSSL*TSPGSRCYPRG
Trigger: CCCCCTGGGGTAACAGCGTGACCCTGGAGACGTCCAGAGAGAAGAGCTCTTCGCACCATCCTCTGGTCCTCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp TGCACGGTCAGTGTTACGTCCTGGCCCTCCGTTGGCTaGGTGGGCACGGGCACGATCATCGTGGCAACTGCT +
Preference number: 6 (lower is better)
Translates to: CTVSVTSWPSVG*VGTGTIIVATA
Trigger: AGCAGTTGCCACGATGATCGTGCCCGTGCCCACCAAGCCAACGGAGGGCCAGGACGTAACACTGACCGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp GGCTCTGGGCAGGACCTGGACACGCACCACAGGGTGAGGGACGTGTaGAAGTCAACTTTGATGGTGCAGCCTGTGCGGGTGGTGGAATCC +
Preference number: 6 (lower is better)
Translates to: GSGQDLDTHHRVRDV*KSTLMVQPVRVVES
Trigger: GGATTCCACCACCCGCACAGGCTGCACCATCAAAGTTGACTTCAACACGTCCCTCACCCTGTGGTGCGTGTCCAGGTCCTGCCCAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 72 bp TGCTCACGATGTAGCTGGCCACCAGGTATGACACGCTaGGTGTGGGCCCCGCATACCAGCTGTAGGCGAGCA +
Preference number: 6 (lower is better)
Translates to: CSRCSWPPGMTR*VWAPHTSCRRA
Trigger: TGCTCGCCTACAGCTGGTATGCGGGGCCCACACTCAGCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 72 bp CAACTGCCTGTTGAAGGTCTGCAGGATGTAGGTGCCTaGGTGCCGGGGCAGGATGCCCTGGATGTCCAGGCT +
Preference number: 6 (lower is better)
Translates to: QLPVEGLQDVGA*VPGQDALDVQA
Trigger: AGCCTGGACATCCAGGGCATCCTGCCCCGGCACTCAGGCACCTACATCCTGCAGACCTTCAACAGGCAGTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp TCAGCGCCATCTTTCACCCCAAACCGAGTCTTGGAGATGGTGGCGTaGAAGTCCCAGTGCTCGGACTCCCTTCCTGGTTGGGGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: SAPSFTPNRVLEMVA*KSQCSDSLPGWGSA
Trigger: AGCCGAGCCCCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGTGAAAGATGGCGCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp CTGCTGATGTTGAGGTGGTCTTGGCCGTTCTTTAGGGCCTGCCCGTaGAAGGTCCACACATACTCGGGCTCTGGGCAGGACCTGGACACG +
Preference number: 6 (lower is better)
Translates to: LLMLRWSWPFFRACP*KVHTYSGSGQDLDT
Trigger: CGTGTCCAGGTCCTGCCCAGAGCCCGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAACATCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS TCA 72 bp ATCGCCTGTGCTCACGATGTAGCTGGCCACCAGGTATaGCACGCTGAGTGTGGGCCCCGCATACCAGCTGTA +
Preference number: 6 (lower is better)
Translates to: IACAHDVAGHQV*HAECGPRIPAV
Trigger: TACAGCTGGTATGCGGGGCCCACACTCAGCGTGTCATACCTGGTGGCCAGCTACATCGTGAGCACAGGCGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp ACTTTGATGGTGCAGCCTGTGCGGGTGGTGGAATCCTaGAGGATGGCCACACGCTCTGGGCCAAAGTACACG +
Preference number: 6 (lower is better)
Translates to: TLMVQPVRVVES*RMATRSGPKYT
Trigger: CGTGTACTTTGGCCCAGAGCGTGTGGCCATCCTCCAGGATTCCACCACCCGCACAGGCTGCACCATCAAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp TGGGCGGCTGTCATGCTGCTGATGTTGAGGTGGTCTTaGCCGTTCTTTAGGGCCTGCCCGTTGAAGGTCCAC +
Preference number: 6 (lower is better)
Translates to: WAAVMLLMLRWS*PFFRACPLKVH
Trigger: GTGGACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAACATCAGCAGCATGACAGCCGCCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp CAGGACCTGGACACGCACCACAGGGTGAGGGACGTGTaGAAGTCAACTTTGATGGTGCAGCCTGTGCGGGTG +
Preference number: 6 (lower is better)
Translates to: QDLDTHHRVRDV*KSTLMVQPVRV
Trigger: CACCCGCACAGGCTGCACCATCAAAGTTGACTTCAACACGTCCCTCACCCTGTGGTGCGTGTCCAGGTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp TTGAGGTGGTCTTGGCCGTTCTTTAGGGCCTGCCCGTaGAAGGTCCACACATACTCGGGCTCTGGGCAGGAC +
Preference number: 6 (lower is better)
Translates to: LRWSWPFFRACP*KVHTYSGSGQD
Trigger: GTCCTGCCCAGAGCCCGAGTATGTGTGGACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp GCCAGCTGTACCCAGTCAGCGCCATCTTTCACCCCAAACCGAGTCTaGGAGATGGTGGCGTTGAAGTCCCAGTGCTCGGACTCCCTTCCT +
Preference number: 6 (lower is better)
Translates to: ASCTQSAPSFTPNRV*EMVALKSQCSDSLP
Trigger: AGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGTGAAAGATGGCGCTGACTGGGTACAGCTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp ATACATGTGTACGTCCCCTCCTGGGCGGCTGTCATGCTGCTGATGTaGAGGTGGTCTTGGCCGTTCTTTAGGGCCTGCCCGTTGAAGGTC +
Preference number: 6 (lower is better)
Translates to: IHVYVPSWAAVMLLM*RWSWPFFRACPLKV
Trigger: GACCTTCAACGGGCAGGCCCTAAAGAACGGCCAAGACCACCTCAACATCAGCAGCATGACAGCCGCCCAGGAGGGGACGTACACATGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp ACCCAGTCAGCGCCATCTTTCACCCCAAACCGAGTCTaGGAGATGGTGGCGTTGAAGTCCCAGTGCTCGGAC +
Preference number: 6 (lower is better)
Translates to: TQSAPSFTPNRV*EMVALKSQCSD
Trigger: GTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGTGAAAGATGGCGCTGACTGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 90 bp GCAGAGAGCTTGACCACGACTGAGGCAGATCCAGATAGCAGGGTCTaGGTGTTCTTCGCAATACATGTGTACGTCCCCTCCTGGGCGGCT +
Preference number: 6 (lower is better)
Translates to: AESLTTTEADPDSRV*VFFAIHVYVPSWAA
Trigger: AGCCGCCCAGGAGGGGACGTACACATGTATTGCGAAGAACACCAAGACCCTGCTATCTGGATCTGCCTCAGTCGTGGTCAAGCTCTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CAA 72 bp TCTTTCACCCCAAACCGAGTCTTGGAGATGGTGGCGTaGAAGTCCCAGTGCTCGGACTCCCTTCCTGGTTGG +
Preference number: 6 (lower is better)
Translates to: SFTPNRVLEMVA*KSQCSDSLPGW
Trigger: CCAACCAGGAAGGGAGTCCGAGCACTGGGACTTCAACGCCACCATCTCCAAGACTCGGTTTGGGGTGAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7
CDS CCA 72 bp TTGGTGTTCTTCGCAATACATGTGTACGTCCCCTCCTaGGCGGCTGTCATGCTGCTGATGTTGAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: LVFFAIHVYVPS*AAVMLLMLRWS
Trigger: AGACCACCTCAACATCAGCAGCATGACAGCCGCCCAGGAGGGGACGTACACATGTATTGCGAAGAACACCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000405314.2
ENST00000587331.7