RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CEACAM1 (Homo sapiens)

Ensembl gene IDs: ENSG00000079385

Ensembl transcript IDs: ENST00000161559.11, ENST00000344391.9, ENST00000352591.9, ENST00000358394.7, ENST00000377806.7, ENST00000403444.7, ENST00000465051.1, ENST00000488639.6

Found 285 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GCTGTAAACAATGCCACCAGCATGAGTGATAGTGTCCCTGTAGGGTaGTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAG +
Preference number: 1 (lower is better)
Translates to: AVNNATSMSDSVPVG*SHFSRTKYTLAEAK
Trigger: CTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTACAGGGACACTATCACTCATGCTGGTGGCATTGTTTACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR GCA 90 bp GGGAAGGGAGGGGAAGTTCTGGTCCCTCTTTCCCAAAGTCAGCTTTaGCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCC +
Preference number: 1 (lower is better)
Translates to: GKGGEVLVPLSQSQL*QISMTRRLGFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAAAGAGGGACCAGAACTTCCCCTCCCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CCA 90 bp AAAAATCTTGAGAGGCTCCTGACCAAGGGACCTGAGGGATTTCGGTaGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAG +
Preference number: 1 (lower is better)
Translates to: KNLERLLTKGPEGFR*FLSPKAIGLADIAK
Trigger: CTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTTGGTCAGGAGCCTCTCAAGATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR TCA 90 bp CACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTaGCAAAGTGAATGGGGGCAAACAGAAAATGCACAGGTGCAAACA +
Preference number: 1 (lower is better)
Translates to: HFSRTKYTLAEAKVS*QSEWGQTENAQVQT
Trigger: TGTTTGCACCTGTGCATTTTCTGTTTGCCCCCATTCACTTTGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR TCA 90 bp AAGTTCTGGTCCCTCTTTCCCAAAGTCAGCTTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCAT +
Preference number: 1 (lower is better)
Translates to: KFWSLFPKVSFAKFQ*QEGWVSYRLPMYFH
Trigger: ATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAAAGAGGGACCAGAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAATCTTGAGAGGCTCCTaGCCAAGGGACCTGAGGGAT +
Preference number: 2 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTILRGS*PRDLRD
Trigger: ATCCCTCAGGTCCCTTGGTCAGGAGCCTCTCAAGAT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATACCTGACCAAGGGACCTaGGGGATTTCGGTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIPDQGT*GISVVS
Trigger: AGAAACCACCGAAATCCCTCAGGTCCCTTGGTCAGG...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAATCTTGAGAGGCTCCTaGCCAAGGGACCTGAGGGAT +
Preference number: 2 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLILRGS*PRDLRD
Trigger: ATCCCTCAGGTCCCTTGGTCAGGAGCCTCTCAAGAT...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAGAGGCCAAGGTTTCCTaGCAAAGTGAATGGGGGCAA +
Preference number: 2 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTEAKVS*QSEWGQ
Trigger: TTGCCCCCATTCACTTTGTCAGGAAACCTTGGCCTC...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGCAGGCAGCCTGGAGATaGCTATTAGGAAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLQAAWR*LLGRKS
Trigger: ACTCTTCCTTCCTAATAGGCATCTCCAGGCTGCCTG...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACCAGGCAGCCTGGAGATaGCTATTAGGAAGGAAGAGT +
Preference number: 2 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADQAAWR*LLGRKS
Trigger: ACTCTTCCTTCCTAATAGGCATCTCCAGGCTGCCTG...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCACAGGTAGACAACCCTaGCAGTGGACAAAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSTGRQP*QWTKVW
Trigger: CCACACCTTTGTCCACTGTCAGGGTTGTCTACCTGT...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAACAGGTAGACAACCCTaGCAGTGGACAAAGGTGTGG +
Preference number: 2 (lower is better)
Translates to: PEGFRWFLSPKAIGLADITGRQP*QWTKVW
Trigger: CCACACCTTTGTCCACTGTCAGGGTTGTCTACCTGT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTCTCTCAGCACTGCCTTaGACAGAGCCCATAAAGATA +
Preference number: 2 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVLSALP*TEPIKI
Trigger: TATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAG...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTGAAATACATCAGCACTaGAGTGAGCAGGACAGGTTT +
Preference number: 2 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVEIHQH*SEQDRF
Trigger: AAACCTGTCCTGCTCACTGCAGTGCTGATGTATTTC...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCGAAATACATCAGCACTaGAGTGAGCAGGACAGGTTT +
Preference number: 2 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFEIHQH*SEQDRF
Trigger: AAACCTGTCCTGCTCACTGCAGTGCTGATGTATTTC...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGGTGGGAAGGAATGAGTaGTCTGAACAGGCAAGTTTA +
Preference number: 2 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLVGRNE*SEQASL
Trigger: TAAACTTGCCTGTTCAGAGCACTCATTCCTTCCCAC...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCGGGGCAAACAGAAAATaGACAGGTGCAAACATGGAA +
Preference number: 2 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFGANRK*TGANME
Trigger: TTCCATGTTTGCACCTGTGCATTTTCTGTTTGCCCC...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CAA 90 bp ACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTaGAAATACATCAGCACTGCAGTGAGCAGGACAGGTTTCATTACT +
Preference number: 2 (lower is better)
Translates to: TPTGERNLLVMRVRD*KYISTAVSRTGFIT
Trigger: AGTAATGAAACCTGTCCTGCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403444.7
3UTR-3UTR GCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGAGGAGAAGGCATTACTaGCTTTACTTTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLRRRHY*LYFLSL
Trigger: GAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCT...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACAGGAGAAGGCATTACTaGCTTTACTTTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADRRRHY*LYFLSL
Trigger: GAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCT...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATACCTGAGGGATTTCGGTaGTTTCTTTCACCTAAGGCA +
Preference number: 2 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIPEGFR*FLSPKA
Trigger: TGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTATGGTAGTTGATGATTaGTCTGAGGTGCCTAGAAAC +
Preference number: 2 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVMVVDD*SEVPRN
Trigger: GTTTCTAGGCACCTCAGACCAATCATCAACTACCAT...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATACTGAAGTTGGTTGTGTaGGTTGCTGGGCTTCAAAGT +
Preference number: 2 (lower is better)
Translates to: PEGFRWFLSPKAIGLADILKLVV*VAGLQS
Trigger: ACTTTGAAGCCCAGCAACCCACACAACCAACTTCAG...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403444.7
3UTR-3UTR TCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCTTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFFAKFQ*QEGWVS
Trigger: GGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAA...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTCTCTCAGCACTGCCTTaGACAGAGCCCATAAAGATA +
Preference number: 2 (lower is better)
Translates to: DSICVEDWVRSTFACLPPLSALP*TEPIKI
Trigger: TATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAG...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAAAAGCTGGTTCCCTCCTaGAGCTATAACCCCTCCCTC +
Preference number: 2 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKKLVPS*SYNPSL
Trigger: GAGGGAGGGGTTATAGCTTCAGGAGGGAACCAGCTT...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGATAACCTCAAGGCTATaGCAAATCCGAATTAGAGTG +
Preference number: 2 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLITSRL*QIRIRV
Trigger: CACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTCTCTCTCTTGTTTCCTaGCACATGTACTTAATGGAA +
Preference number: 2 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVLSLVS*HMYLME
Trigger: TTCCATTAAGTACATGTGCCAGGAAACAAGAGAGAG...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTCCTGACCAAGGGACCTaGGGGATTTCGGTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: RCLETELNLALAMNEENLPDQGT*GISVVS
Trigger: AGAAACCACCGAAATCCCTCAGGTCCCTTGGTCAGG...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAAGGGTTAGAAAACCCTaGAAGAGGTACCTGAGTATA +
Preference number: 2 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLRVRKP*KRYLSI
Trigger: TATACTCAGGTACCTCTTTCAGGGTTTTCTAACCCT...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAAAGTGACCAGGCAGCCTaGAGATGCCTATTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKSDQAA*RCLLGR
Trigger: CCTTCCTAATAGGCATCTCCAGGCTGCCTGGTCACT...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCAGTGACCAGGCAGCCTaGAGATGCCTATTAGGAAGG +
Preference number: 2 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFSDQAA*RCLLGR
Trigger: CCTTCCTAATAGGCATCTCCAGGCTGCCTGGTCACT...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTATAACCTCAAGGCTATaGCAAATCCGAATTAGAGTG +
Preference number: 2 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAITSRL*QIRIRV
Trigger: CACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTCAGTGGACAAAGGTGTaGCATTTCACTATTGGTTAT +
Preference number: 2 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAQWTKV*HFTIGY
Trigger: ATAACCAATAGTGAAATGCCACACCTTTGTCCACTG...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCATCAGGAATTGCCTTaGATTTTGGCAAGTGATTTT +
Preference number: 2 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFHQELP*ILASDF
Trigger: AAAATCACTTGCCAAAATCCAAGGCAATTCCTGATG...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGGGTTGTGTGGGTTGCTaGGCTTCAAAGTTCAGGGTA +
Preference number: 2 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTEGCVGC*ASKFRV
Trigger: TACCCTGAACTTTGAAGCCCAGCAACCCACACAACC...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403444.7
3UTR-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTACTCTTAGGCCTAACATaGGATCAGGTAAGCAATATA +
Preference number: 2 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLLLGLT*DQVSNI
Trigger: TATATTGCTTACCTGATCTCATGTTAGGCCTAAGAG...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGAATAAATTATTTCTGTaGCTGTTAGGGATGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGNKLFL*LLGMGR
Trigger: CCTCCCCATCCCTAACAGCCACAGAAATAATTTATT...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403444.7
3UTR-3UTR TCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAACTCTCAGCACTGCCTTaGACAGAGCCCATAAAGATA +
Preference number: 2 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKLSALP*TEPIKI
Trigger: TATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAG...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTGAAATACATCAGCACTaGAGTGAGCAGGACAGGTTT +
Preference number: 2 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSEIHQH*SEQDRF
Trigger: AAACCTGTCCTGCTCACTGCAGTGCTGATGTATTTC...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CAA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATaGGCTGACATAGCTAAGCTAAGTAAAAATAACCCTTTTCACATA +
Preference number: 2 (lower is better)
Translates to: GPEGFRWFLSPKAIG*ADIAKLSKNNPFHI
Trigger: TATGTGAAAAGGGTTATTTTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CAA 90 bp CCTCTTTCCCAAAGTCAGCTTTGCCAAATTTCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACT +
Preference number: 2 (lower is better)
Translates to: PLSQSQLCQISMTRR*GFLQTPNVLSSIDT
Trigger: AGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAAAGAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCTTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFFAKFQ*QEGWVS
Trigger: GGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAA...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR TCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAATTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCC +
Preference number: 2 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKFAKFQ*QEGWVS
Trigger: GGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAA...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAAGTGGGAAGGAATGAGTaGTCTGAACAGGCAAGTTTA +
Preference number: 2 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEVGRNE*SEQASL
Trigger: TAAACTTGCCTGTTCAGAGCACTCATTCCTTCCCAC...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR GCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTAGGAGAAGGCATTACTaGCTTTACTTTCTCTCTCTC +
Preference number: 2 (lower is better)
Translates to: RCLETELNLALAMNEENLRRRHY*LYFLSL
Trigger: GAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCT...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTGTGTTTATCAGAAGCTaGTTCCCTCCTGAAGCTATA +
Preference number: 2 (lower is better)
Translates to: RCLETELNLALAMNEENLVFIRS*FPPEAI
Trigger: TATAGCTTCAGGAGGGAACCAGCTTCTGATAAACAC...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CCA 72 bp GAGAGGCTCCTGACCAAGGGACCTGAGGGATTTCGGTaGTTTCTTTCACCTAAGGCAATCGGATTGGCTGAC +
Preference number: 3 (lower is better)
Translates to: ERLLTKGPEGFR*FLSPKAIGLAD
Trigger: GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTTGGTCAGGAGCCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCTCTCTGAAGACAGGCTaGCCAGAAGGATTAGGTGGT +
Preference number: 3 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFSLKTG*PEGLGG
Trigger: ACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGA...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACATCTCTGAAGACAGGCTaGCCAGAAGGATTAGGTGGT +
Preference number: 3 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTSLKTG*PEGLGG
Trigger: ACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGA...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCCTAAGGCAATCGGATaGGCTGACATAGCTAAGCTA +
Preference number: 3 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFPKAIG*ADIAKL
Trigger: TAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGG...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR GCA 72 bp AATGCCACCAGCATGAGTGATAGTGTCCCTGTAGGGTaGTCCCACTTCTCAAGGACCAAATACACCTTAGCA +
Preference number: 3 (lower is better)
Translates to: NATSMSDSVPVG*SHFSRTKYTLA
Trigger: TGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTACAGGGACACTATCACTCATGCTGGTGGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGATGTACTTTCATCTATaGACACTGAGAGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLMYFHL*TLREGQ
Trigger: CTGCCCCTCTCTCAGTGTCAATAGATGAAAGTACAT...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAAGTTGGTTGTGTGGGTaGCTGGGCTTCAAAGTTCAG +
Preference number: 3 (lower is better)
Translates to: PEGFRWFLSPKAIGLADISWLCG*LGFKVQ
Trigger: CTGAACTTTGAAGCCCAGCAACCCACACAACCAACT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403444.7
3UTR-3UTR CAA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTATGGGGAGGCTGAAGTaGGTTGTGTGGGTTGCTGGG +
Preference number: 3 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSMGRLK*VVWVAG
Trigger: CCCAGCAACCCACACAACCAACTTCAGCCTCCCCAT...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403444.7
3UTR TCA 72 bp AGGTGCTTAGACCCTGATCCTACAGGTAGACAACCCTaGCAGTGGACAAAGGTGTGGCATTTCACTATTGGT +
Preference number: 3 (lower is better)
Translates to: RCLDPDPTGRQP*QWTKVWHFTIG
Trigger: ACCAATAGTGAAATGCCACACCTTTGTCCACTGTCAGGGTTGTCTACCTGTAGGATCAGGGTCTAAGCACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGTCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCC +
Preference number: 3 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGSMTRR*GFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGA...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCC +
Preference number: 3 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSSMTRR*GFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGA...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTACTTTCTCTCTCTCTaGTTTCCTGGCACATGTACT +
Preference number: 3 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVYFLSL*FPGTCT
Trigger: AGTACATGTGCCAGGAAACAAGAGAGAGAGAAAGTA...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTCCTCTCAGCACTGCCTaGAACAGAGCCCATAAAGAT +
Preference number: 3 (lower is better)
Translates to: DSICVEDWVRSTFACLPPPLSTA*NRAHKD
Trigger: ATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAGG...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACACAAGTTCCTAGCAGATaGTGTTTATCAGAAGCTGGT +
Preference number: 3 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTQVPSR*CLSEAG
Trigger: ACCAGCTTCTGATAAACACAATCTGCTAGGAACTTG...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR TCA 72 bp AGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTaGCAAAGTGAATGGGGGCAAACAGAAAATGCACAG +
Preference number: 3 (lower is better)
Translates to: RTKYTLAEAKVS*QSEWGQTENAQ
Trigger: CTGTGCATTTTCTGTTTGCCCCCATTCACTTTGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTACTTTCTCTCTCTCTaGTTTCCTGGCACATGTACT +
Preference number: 3 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSYFLSL*FPGTCT
Trigger: AGTACATGTGCCAGGAAACAAGAGAGAGAGAAAGTA...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp ACACAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCC +
Preference number: 3 (lower is better)
Translates to: TQGFGEIGEGITAFTFSLSMTRR*GFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGA...GAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGTTCCCAAAGTCAGCTTaGCCAAATTTCAATGACAAG +
Preference number: 3 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKFPKSA*PNFNDK
Trigger: CTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAA...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR TCA 72 bp AAAGTATGCACAGTCCGTGTCAGGGTTAGAAAACCCTaGAAGAGGTACCTGAGTATAGAGAACTCCAAGCTA +
Preference number: 3 (lower is better)
Translates to: KVCTVRVRVRKP*KRYLSIENSKL
Trigger: TAGCTTGGAGTTCTCTATACTCAGGTACCTCTTTCAGGGTTTTCTAACCCTGACACGGACTGTGCATACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTATGTACTTTCATCTATaGACACTGAGAGAGGGGCAG +
Preference number: 3 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSMYFHL*TLREGQ
Trigger: CTGCCCCTCTCTCAGTGTCAATAGATGAAAGTACAT...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CCA 72 bp ATGTACTTAATGGAAAAGGACATAACCTCAAGGCTATaGCAAATCCGAATTAGAGTGATAGGACAGGACTGG +
Preference number: 3 (lower is better)
Translates to: MYLMEKDITSRL*QIRIRVIGQDW
Trigger: CCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTATGTCCTTTTCCATTAAGTACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTTTCCCAAAGTCAGCTTaGCCAAATTTCAATGACAAG +
Preference number: 3 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSFPKSA*PNFNDK
Trigger: CTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAA...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAATACTTTCTCTCTCTCTaGTTTCCTGGCACATGTACT +
Preference number: 3 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEYFLSL*FPGTCT
Trigger: AGTACATGTGCCAGGAAACAAGAGAGAGAGAAAGTA...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR-3UTR CAA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAATTCCCAAAGTCAGCTTaGCCAAATTTCAATGACAAG +
Preference number: 3 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEFPKSA*PNFNDK
Trigger: CTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAA...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGGGTACACGCACTCTGTaGAGTGGGGCTGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLGTRTL*SGAERC
Trigger: GCACCTCTCAGCCCCACTTCACAGAGTGCGTGTACC...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCGTGAGCAGAAGCCCCTaGCAGGGTACACGCACTCTG +
Preference number: 4 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFVSRSP*QGTRTL
Trigger: CAGAGTGCGTGTACCCTGGCAGGGGCTTCTGCTCAC...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACTCTGTGAGATCACGCTaGTCGCTTGCCCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADSVRSR*SLALPV
Trigger: GACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGA...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR TCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAGGTACACGCACTCTGTaGAGTGGGGCTGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTGTRTL*SGAERC
Trigger: GCACCTCTCAGCCCCACTTCACAGAGTGCGTGTACC...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGTTAGAAGTGAGGCTGTaGGCAGAAGCCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLLEVRL*AEAPAR
Trigger: CCTGGCAGGGGCTTCTGCTCACAGCCTCACTTCTAA...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTCATGGTGTCTCCTGCTaGCCCTGTCTTCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVHGVSC*PCLHLW
Trigger: CCACAGGTGAAGACAGGGCCAGCAGGAGACACCATG...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTAGCAATGGCCCCAGGTaGGAGGCCATTTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVSNGPR*EAIFLW
Trigger: CCACAAGAAAATGGCCTCTCACCTGGGGCCATTGCT...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTAAGCTGGTTCCCTCCTaGAGCTATAACCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVKLVPS*SYNPSL
Trigger: GAGGGAGGGGTTATAGCTTCAGGAGGGAACCAGCTT...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAGTGAGCAGAAGCCCCTaGCAGGGTACACGCACTCTG +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKVSRSP*QGTRTL
Trigger: CAGAGTGCGTGTACCCTGGCAGGGGCTTCTGCTCAC...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTATTAGAAGTGAGGCTGTaGGCAGAAGCCCCTGCCAGG +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLLEVRL*AEAPAR
Trigger: CCTGGCAGGGGCTTCTGCTCACAGCCTCACTTCTAA...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTAGGGTTTGTGCTCTGTaGGATCACGCTGGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLARVCAL*DHAGRL
Trigger: CAAGCGACCAGCGTGATCTCACAGAGCACAAACCCT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR TCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTCCTGACCAAGGGACCTaGGGGATTTCGGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAPDQGT*GISVVS
Trigger: AGAAACCACCGAAATCCCTCAGGTCCCTTGGTCAGG...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACGAGGCCAAGGTTTCCTaGCAAAGTGAATGGGGGCAA +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADEAKVS*QSEWGQ
Trigger: TTGCCCCCATTCACTTTGTCAGGAAACCTTGGCCTC...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTCTACTCCAATCACAATaGCAGCAATGGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVLLQSQ*QQWPQV
Trigger: CACCTGGGGCCATTGCTGGCATTGTGATTGGAGTAG...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAAGTGTCCCTGTAGGGTaGTCCCACTTCTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTSVPVG*SHFSRT
Trigger: GGTCCTTGAGAAGTGGGAGCACCCTACAGGGACACT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTACATGGTGTCTCCTGCTaGCCCTGTCTTCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLHGVSC*PCLHLW
Trigger: CCACAGGTGAAGACAGGGCCAGCAGGAGACACCATG...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGAGGGTGGTGTTGCCCTaGGACAGCTTCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKRVVLP*DSFILS
Trigger: GGAGAGGATGAAGCTGTCCCAGGGCAACACCACCCT...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCAGGGTGGTGTTGCCCTaGGACAGCTTCATCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSRVVLP*DSFILS
Trigger: GGAGAGGATGAAGCTGTCCCAGGGCAACACCACCCT...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTTCTGTGAGATCACGCTaGTCGCTTGCCCTGCCGGTC +
Preference number: 4 (lower is better)
Translates to: DSICVEDWVRSTFACLPPSVRSR*SLALPV
Trigger: GACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGA...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAGTTGCAGCCAGTGACTaGGTTATTGGCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLVAASD*VIGVAG
Trigger: ACCTGCCACGCCAATAACTCAGTCACTGGCTGCAAC...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAGTTGCAGCCAGTGACTaGGTTATTGGCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKVAASD*VIGVAG
Trigger: ACCTGCCACGCCAATAACTCAGTCACTGGCTGCAAC...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCGTTGCAGCCAGTGACTaGGTTATTGGCGTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSVAASD*VIGVAG
Trigger: ACCTGCCACGCCAATAACTCAGTCACTGGCTGCAAC...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACAGTCCTTATCTCCTGTaGCTGTGGTCTTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADSPYLL*LWSCWL
Trigger: AAGCCAGCAAGACCACAGTCACAGGAGATAAGGACT...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAAGCAATGGCCCCAGGTaGGAGGCCATTTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: PEGFRWFLSPKAIGLADISNGPR*EAIFLW
Trigger: CCACAAGAAAATGGCCTCTCACCTGGGGCCATTGCT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGAGGGTTTGTGCTCTGTaGGATCACGCTGGTCGCTTG +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKRVCAL*DHAGRL
Trigger: CAAGCGACCAGCGTGATCTCACAGAGCACAAACCCT...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR TCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCAAGCTGGTTCCCTCCTaGAGCTATAACCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSKLVPS*SYNPSL
Trigger: GAGGGAGGGGTTATAGCTTCAGGAGGGAACCAGCTT...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGATCTTGAGAGGCTCCTaGCCAAGGGACCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKILRGS*PRDLRD
Trigger: ATCCCTCAGGTCCCTTGGTCAGGAGCCTCTCAAGAT...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAATCTTGAGAGGCTCCTaGCCAAGGGACCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIILRGS*PRDLRD
Trigger: ATCCCTCAGGTCCCTTGGTCAGGAGCCTCTCAAGAT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTACAGCACAGCATGGATaGGGGAAAGTATGCACAGTC +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVTAQHG*GKVCTV
Trigger: GACTGTGCATACTTTCCCTCATCCATGCTGTGCTGT...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCACAGCACAGCATGGATaGGGGAAAGTATGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFTAQHG*GKVCTV
Trigger: GACTGTGCATACTTTCCCTCATCCATGCTGTGCTGT...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCCGCTTCGAGCACGGCTaGTCTGTCACCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSRFEHG*SVTSAV
Trigger: AACAGCAGAGGTGACAGAGCAGCCGTGCTCGAAGCG...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR GCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTCCGGTCTTCCCGAAATaGAGAAAACATGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAPVFPK*RKHARA
Trigger: AGCCCTGGCATGTTTTCTGCATTTCGGGAAGACCGG...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCTGGTCTTGCTGGCTTTaGTTTGGGGCTTTGCTACTA +
Preference number: 4 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFWSCWL*FGALLL
Trigger: TAGTAGCAAAGCCCCAAATCAAAGCCAGCAAGACCA...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTGGAGACTCTGGTTTTTaGAGAACCAACGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVGDSGF*RTNGWR
Trigger: TCTCCATCCGTTGGTTCTTCAAAAACCAGAGTCTCC...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGCAATGGCCCCAGGTaGGAGGCCATTTTCTTGTGG +
Preference number: 4 (lower is better)
Translates to: GKESPSDEGERLEIHQHCSNGPR*EAIFLW
Trigger: CCACAAGAAAATGGCCTCTCACCTGGGGCCATTGCT...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAAGTGTGGTTGGAGACTaGGGGTTTGTGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLSVVGD*GFVLCE
Trigger: CTCACAGAGCACAAACCCTCAGTCTCCAACCACACT...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR TCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACACATCAGCACTGCAGTaGGCAGGACAGGTTTCATTA +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADTSALQ*AGQVSL
Trigger: TAATGAAACCTGTCCTGCTCACTGCAGTGCTGATGT...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAACAGGTAGACAACCCTaGCAGTGGACAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLTGRQP*QWTKVW
Trigger: CCACACCTTTGTCCACTGTCAGGGTTGTCTACCTGT...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCCTACTCCAATCACAATaGCAGCAATGGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSLLQSQ*QQWPQV
Trigger: CACCTGGGGCCATTGCTGGCATTGTGATTGGAGTAG...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGCTACTCCAATCACAATaGCAGCAATGGCCCCAGGTG +
Preference number: 4 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGLLQSQ*QQWPQV
Trigger: CACCTGGGGCCATTGCTGGCATTGTGATTGGAGTAG...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGCCGGTCTTCCCGAAATaGAGAAAACATGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKPVFPK*RKHARA
Trigger: AGCCCTGGCATGTTTTCTGCATTTCGGGAAGACCGG...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCGAGACTGAGGGTTTGTaGTCTGTGAGATCACGCTGG +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSETEGL*SVRSRW
Trigger: CCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTC...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR GCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTCAGGCAGCCTGGAGATaGCTATTAGGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAQAAWR*LLGRKS
Trigger: ACTCTTCCTTCCTAATAGGCATCTCCAGGCTGCCTG...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACGGTGAGAAGTACATTTaGCTGTCTTCCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADGEKYI*LSSSCP
Trigger: AGGACAGGAGGAAGACAGGCAAATGTACTTCTCACC...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGGTTGTGTGGGTTGCTaGGCTTCAAAGTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAGCVGC*ASKFRV
Trigger: TACCCTGAACTTTGAAGCCCAGCAACCCACACAACC...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGCTGAAGTTGGTTGTGTaGGTTGCTGGGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLLKLVV*VAGLQS
Trigger: ACTTTGAAGCCCAGCAACCCACACAACCAACTTCAG...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAAGTGACCAGGCAGCCTaGAGATGCCTATTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PEGFRWFLSPKAIGLADISDQAA*RCLLGR
Trigger: CCTTCCTAATAGGCATCTCCAGGCTGCCTGGTCACT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGAGTGACCAGGCAGCCTaGAGATGCCTATTAGGAAGG +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKSDQAA*RCLLGR
Trigger: CCTTCCTAATAGGCATCTCCAGGCTGCCTGGTCACT...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCGGTACACGCACTCTGTaGAGTGGGGCTGAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFGTRTL*SGAERC
Trigger: GCACCTCTCAGCCCCACTTCACAGAGTGCGTGTACC...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTACATCAGCACTGCAGTaGGCAGGACAGGTTTCATTA +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLATSALQ*AGQVSL
Trigger: TAATGAAACCTGTCCTGCTCACTGCAGTGCTGATGT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGCGCTTCGAGCACGGCTaGTCTGTCACCTCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTERFEHG*SVTSAV
Trigger: AACAGCAGAGGTGACAGAGCAGCCGTGCTCGAAGCG...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR GCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCGTGAGCAGAAGCCCCTaGCAGGGTACACGCACTCTG +
Preference number: 4 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFVSRSP*QGTRTL
Trigger: CAGAGTGCGTGTACCCTGGCAGGGGCTTCTGCTCAC...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACGAAATGCAGAAAACATaGCAGGGCTACTGCTATCAG +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADEMQKT*QGYCYQ
Trigger: CTGATAGCAGTAGCCCTGGCATGTTTTCTGCATTTC...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCGAGACTGAGGGTTTGTaGTCTGTGAGATCACGCTGG +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSETEGL*SVRSRW
Trigger: CCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTC...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR GCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACGGGGCAAACAGAAAATaGACAGGTGCAAACATGGAA +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADGANRK*TGANME
Trigger: TTCCATGTTTGCACCTGTGCATTTTCTGTTTGCCCC...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTGGGGCAAACAGAAAATaGACAGGTGCAAACATGGAA +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVGANRK*TGANME
Trigger: TTCCATGTTTGCACCTGTGCATTTTCTGTTTGCCCC...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAGGTGAGAAGTACATTTaGCTGTCTTCCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTGEKYI*LSSSCP
Trigger: AGGACAGGAGGAAGACAGGCAAATGTACTTCTCACC...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGGAGGACGGGAGACTCTaGTTTTTGAAGAACCAACGG +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKEDGRL*FLKNQR
Trigger: CCGTTGGTTCTTCAAAAACCAGAGTCTCCCGTCCTC...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp GGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATGATGGGGTCGCTTTaGTTCTTACTGATTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GPEGFRWFLSPKAIGLADMMGSL*FLLIGL
Trigger: CAACCCAATCAGTAAGAACCAAAGCGACCCCATCAT...GTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCATTCATCTTGTTAGGTaGGTCATTGGAGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFIHLVR*VIGVVL
Trigger: CAGGACCACTCCAATGACCCACCTAACAAGATGAAT...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCGGTTGTGTGGGTTGCTaGGCTTCAAAGTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSGCVGC*ASKFRV
Trigger: TACCCTGAACTTTGAAGCCCAGCAACCCACACAACC...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCGGAGACTCTGGTTTTTaGAGAACCAACGGATGGAGA +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSGDSGF*RTNGWR
Trigger: TCTCCATCCGTTGGTTCTTCAAAAACCAGAGTCTCC...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGAGTTTACGTTCAGCATaGTGGGGTCGCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKSLRSA*WGRFGS
Trigger: AGAACCAAAGCGACCCCATCATGCTGAACGTAAACT...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTACTCTCAGCACTGCCTTaGACAGAGCCCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLLSALP*TEPIKI
Trigger: TATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAG...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTAAGCTGGTTCCCTCCTaGAGCTATAACCCCTCCCTC +
Preference number: 4 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSKLVPS*SYNPSL
Trigger: GAGGGAGGGGTTATAGCTTCAGGAGGGAACCAGCTT...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTATCTTGAGAGGCTCCTaGCCAAGGGACCTGAGGGAT +
Preference number: 4 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSILRGS*PRDLRD
Trigger: ATCCCTCAGGTCCCTTGGTCAGGAGCCTCTCAAGAT...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAGAAATGCAGAAAACATaGCAGGGCTACTGCTATCAG +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTEMQKT*QGYCYQ
Trigger: CTGATAGCAGTAGCCCTGGCATGTTTTCTGCATTTC...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp ACACAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCAGTGTCCCTGTAGGGTaGTCCCACTTCTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: TQGFGEIGEGITAFTFSLSVPVG*SHFSRT
Trigger: GGTCCTTGAGAAGTGGGAGCACCCTACAGGGACACT...GAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGGGTGAGAAGTACATTTaGCTGTCTTCCTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGGEKYI*LSSSCP
Trigger: AGGACAGGAGGAAGACAGGCAAATGTACTTCTCACC...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCGAGGACGGGAGACTCTaGTTTTTGAAGAACCAACGG +
Preference number: 4 (lower is better)
Translates to: GKESPSDEGERLEIHQHCEDGRL*FLKNQR
Trigger: CCGTTGGTTCTTCAAAAACCAGAGTCTCCCGTCCTC...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAATGATGGGGTCGCTTTaGTTCTTACTGATTGGGTTG +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTMMGSL*FLLIGL
Trigger: CAACCCAATCAGTAAGAACCAAAGCGACCCCATCAT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTATTCATCTTGTTAGGTaGGTCATTGGAGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLAIHLVR*VIGVVL
Trigger: CAGGACCACTCCAATGACCCACCTAACAAGATGAAT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCGGTTGTGTGGGTTGCTaGGCTTCAAAGTTCAGGGTA +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSGCVGC*ASKFRV
Trigger: TACCCTGAACTTTGAAGCCCAGCAACCCACACAACC...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGCCTGAGGGATTTCGGTaGTTTCTTTCACCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGPEGFR*FLSPKA
Trigger: TGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp ACACAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCACAGGTAGACAACCCTaGCAGTGGACAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: TQGFGEIGEGITAFTFSLTGRQP*QWTKVW
Trigger: CCACACCTTTGTCCACTGTCAGGGTTGTCTACCTGT...GAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAAGGGTTAGAAAACCCTaGAAGAGGTACCTGAGTATA +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTRVRKP*KRYLSI
Trigger: TATACTCAGGTACCTCTTTCAGGGTTTTCTAACCCT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAGAAATGCAGAAAACATaGCAGGGCTACTGCTATCAG +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKEMQKT*QGYCYQ
Trigger: CTGATAGCAGTAGCCCTGGCATGTTTTCTGCATTTC...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGGTGGGAAGGAATGAGTaGTCTGAACAGGCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKVGRNE*SEQASL
Trigger: TAAACTTGCCTGTTCAGAGCACTCATTCCTTCCCAC...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTCATGGTGTCTCCTGCTaGCCCTGTCTTCACCTGTGG +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLHGVSC*PCLHLW
Trigger: CCACAGGTGAAGACAGGGCCAGCAGGAGACACCATG...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTTGCTGGCTTTGATTTaGGGCTTTGCTACTACTGGA +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSLLALI*GFATTG
Trigger: TCCAGTAGTAGCAAAGCCCCAAATCAAAGCCAGCAA...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCTTCCAGTGTCATTTGTaGAGCAGGTCAGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSFQCHL*SRSGSQ
Trigger: CTGTGAACCTGACCTGCTCCACAAATGACACTGGAA...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCCTGAAGTTGGTTGTGTaGGTTGCTGGGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: GKESPSDEGERLEIHQHCLKLVV*VAGLQS
Trigger: ACTTTGAAGCCCAGCAACCCACACAACCAACTTCAG...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTAATAAATTATTTCTGTaGCTGTTAGGGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVNKLFL*LLGMGR
Trigger: CCTCCCCATCCCTAACAGCCACAGAAATAATTTATT...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCGCACAGGTGCAAACATaGAATAGAATGGTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFAQVQT*NRMVVD
Trigger: ATCAACTACCATTCTATTCCATGTTTGCACCTGTGC...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTGCACAGGTGCAAACATaGAATAGAATGGTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVAQVQT*NRMVVD
Trigger: ATCAACTACCATTCTATTCCATGTTTGCACCTGTGC...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAAAGTGTGGTTGGAGACTaGGGGTTTGTGCTCTGTGAG +
Preference number: 4 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKSVVGD*GFVLCE
Trigger: CTCACAGAGCACAAACCCTCAGTCTCCAACCACACT...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR TCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAAGGGTTAGAAAACCCTaGAAGAGGTACCTGAGTATA +
Preference number: 4 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIRVRKP*KRYLSI
Trigger: TATACTCAGGTACCTCTTTCAGGGTTTTCTAACCCT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGACAGCACAGCATGGATaGGGGAAAGTATGCACAGTC +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTETAQHG*GKVCTV
Trigger: GACTGTGCATACTTTCCCTCATCCATGCTGTGCTGT...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCCCGGTCTTCCCGAAATaGAGAAAACATGCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFPVFPK*RKHARA
Trigger: AGCCCTGGCATGTTTTCTGCATTTCGGGAAGACCGG...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGCAGGCAGCCTGGAGATaGCTATTAGGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTEQAAWR*LLGRKS
Trigger: ACTCTTCCTTCCTAATAGGCATCTCCAGGCTGCCTG...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCAGGAGAAGGCATTACTaGCTTTACTTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSRRRHY*LYFLSL
Trigger: GAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCT...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCTTGCTGGCTTTGATTTaGGGCTTTGCTACTACTGGA +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSLLALI*GFATTG
Trigger: TCCAGTAGTAGCAAAGCCCCAAATCAAAGCCAGCAA...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATTGGTTCTTACTGATTaGGTTGAAGACCTCACACCA +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKLVLTD*VEDLTP
Trigger: TGGTGTGAGGTCTTCAACCCAATCAGTAAGAACCAA...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTTGGTTCTTACTGATTaGGTTGAAGACCTCACACCA +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSLVLTD*VEDLTP
Trigger: TGGTGTGAGGTCTTCAACCCAATCAGTAAGAACCAA...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAAGGTCCTGAGTGTGGTTaGAGACTGAGGGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKGPECG*RLRVCA
Trigger: AGCACAAACCCTCAGTCTCCAACCACACTCAGGACC...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR CCA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTAATAAATTATTTCTGTaGCTGTTAGGGATGGGGAGG +
Preference number: 4 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLANKLFL*LLGMGR
Trigger: CCTCCCCATCCCTAACAGCCACAGAAATAATTTATT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAATAACCTCAAGGCTATaGCAAATCCGAATTAGAGTG +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTITSRL*QIRIRV
Trigger: CACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAGTGTTTATCAGAAGCTaGTTCCCTCCTGAAGCTATA +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKVFIRS*FPPEAI
Trigger: TATAGCTTCAGGAGGGAACCAGCTTCTGATAAACAC...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGTGTTTATCAGAAGCTaGTTCCCTCCTGAAGCTATA +
Preference number: 4 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIVFIRS*FPPEAI
Trigger: TATAGCTTCAGGAGGGAACCAGCTTCTGATAAACAC...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAATGGTAGTTGATGATTaGTCTGAGGTGCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLMVVDD*SEVPRN
Trigger: GTTTCTAGGCACCTCAGACCAATCATCAACTACCAT...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAATCTGTGTAGAAGACTaGGTGAGAAGTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIICVED*VRSTFA
Trigger: GGCAAATGTACTTCTCACCCAGTCTTCTACACAGAT...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
3UTR CAA 72 bp AGGGGAAGTTCTGGTCCCTCTTTCCCAAAGTCAGCTTaGCCAAATTTCAATGACAAGAAGGTTGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: RGSSGPSFPKSA*PNFNDKKVGFP
Trigger: AGGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAAAGAGGGACCAGAACTTCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCAGTCCTTATCTCCTGTaGCTGTGGTCTTGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFSPYLL*LWSCWL
Trigger: AAGCCAGCAAGACCACAGTCACAGGAGATAAGGACT...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGTTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGFAKFQ*QEGWVS
Trigger: GGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAA...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKFAKFQ*QEGWVS
Trigger: GGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAA...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTACAGGTAGACAACCCTaGCAGTGGACAAAGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLTGRQP*QWTKVW
Trigger: CCACACCTTTGTCCACTGTCAGGGTTGTCTACCTGT...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAACCTGACCAAGGGACCTaGGGGATTTCGGTGGTTTCT +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEPDQGT*GISVVS
Trigger: AGAAACCACCGAAATCCCTCAGGTCCCTTGGTCAGG...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGCTCTTAGGCCTAACATaGGATCAGGTAAGCAATATA +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKLLGLT*DQVSNI
Trigger: TATATTGCTTACCTGATCTCATGTTAGGCCTAAGAG...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAATGATTGGTCTGAGGTaGCTAGAAACTGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTMIGLR*LETELN
Trigger: ATTTAACTCAGTTTCTAGGCACCTCAGACCAATCAT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAAAGTGTCCCTGTAGGGTaGTCCCACTTCTCAAGGACC +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGESVPVG*SHFSRT
Trigger: GGTCCTTGAGAAGTGGGAGCACCCTACAGGGACACT...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTGGTCCTGAGTGTGGTTaGAGACTGAGGGTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLGPECG*RLRVCA
Trigger: AGCACAAACCCTCAGTCTCCAACCACACTCAGGACC...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR CCA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGCTCTCTCTTGTTTCCTaGCACATGTACTTAATGGAA +
Preference number: 4 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGLSLVS*HMYLME
Trigger: TTCCATTAAGTACATGTGCCAGGAAACAAGAGAGAG...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAGCACAGGTGCAAACATaGAATAGAATGGTAGTTGAT +
Preference number: 4 (lower is better)
Translates to: STPTGERNLLVMRVRDLKAQVQT*NRMVVD
Trigger: ATCAACTACCATTCTATTCCATGTTTGCACCTGTGC...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCATCTGTGTAGAAGACTaGGTGAGAAGTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSICVED*VRSTFA
Trigger: GGCAAATGTACTTCTCACCCAGTCTTCTACACAGAT...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAATGGTCTTGCTGGCTTTaGTTTGGGGCTTTGCTACTA +
Preference number: 4 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKWSCWL*FGALLL
Trigger: TAGTAGCAAAGCCCCAAATCAAAGCCAGCAAGACCA...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAAACATCAGCACTGCAGTaGGCAGGACAGGTTTCATTA +
Preference number: 4 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKTSALQ*AGQVSL
Trigger: TAATGAAACCTGTCCTGCTCACTGCAGTGCTGATGT...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCCTCTTAGGCCTAACATaGGATCAGGTAAGCAATATA +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSLLGLT*DQVSNI
Trigger: TATATTGCTTACCTGATCTCATGTTAGGCCTAAGAG...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTGTGGGAAGGAATGAGTaGTCTGAACAGGCAAGTTTA +
Preference number: 4 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSVGRNE*SEQASL
Trigger: TAAACTTGCCTGTTCAGAGCACTCATTCCTTCCCAC...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGATGATTGGTCTGAGGTaGCTAGAAACTGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKMIGLR*LETELN
Trigger: ATTTAACTCAGTTTCTAGGCACCTCAGACCAATCAT...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCTCTTGTGTGCTTTGCTaGAATGTTCCATTGATAAGC +
Preference number: 4 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSSCVLC*NVPLIS
Trigger: GCTTATCAATGGAACATTCCAGCAAAGCACACAAGA...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCATAACCTCAAGGCTATaGCAAATCCGAATTAGAGTG +
Preference number: 4 (lower is better)
Translates to: GKESPSDEGERLEIHQHCITSRL*QIRIRV
Trigger: CACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCCTCTCTCTTGTTTCCTaGCACATGTACTTAATGGAA +
Preference number: 4 (lower is better)
Translates to: GKESPSDEGERLEIHQHCLSLVS*HMYLME
Trigger: TTCCATTAAGTACATGTGCCAGGAAACAAGAGAGAG...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTCAGTGGACAAAGGTGTaGCATTTCACTATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: DSICVEDWVRSTFACLPPQWTKV*HFTIGY
Trigger: ATAACCAATAGTGAAATGCCACACCTTTGTCCACTG...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCCATCAGGAATTGCCTTaGATTTTGGCAAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSHQELP*ILASDF
Trigger: AAAATCACTTGCCAAAATCCAAGGCAATTCCTGATG...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGAGGGTTAGAAAACCCTaGAAGAGGTACCTGAGTATA +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTERVRKP*KRYLSI
Trigger: TATACTCAGGTACCTCTTTCAGGGTTTTCTAACCCT...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAACAGGCAGCCTGGAGATaGCTATTAGGAAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEQAAWR*LLGRKS
Trigger: ACTCTTCCTTCCTAATAGGCATCTCCAGGCTGCCTG...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTATGATTGGTCTGAGGTaGCTAGAAACTGAGTTAAAT +
Preference number: 4 (lower is better)
Translates to: DSICVEDWVRSTFACLPPMIGLR*LETELN
Trigger: ATTTAACTCAGTTTCTAGGCACCTCAGACCAATCAT...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTTTCCAGTGTCATTTGTaGAGCAGGTCAGGTTCACAG +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLFQCHL*SRSGSQ
Trigger: CTGTGAACCTGACCTGCTCCACAAATGACACTGGAA...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTCTGAAGTTGGTTGTGTaGGTTGCTGGGCTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLLKLVV*VAGLQS
Trigger: ACTTTGAAGCCCAGCAACCCACACAACCAACTTCAG...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGGTGTTTATCAGAAGCTaGTTCCCTCCTGAAGCTATA +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTEVFIRS*FPPEAI
Trigger: TATAGCTTCAGGAGGGAACCAGCTTCTGATAAACAC...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTCCTGAGGGATTTCGGTaGTTTCTTTCACCTAAGGCA +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLPEGFR*FLSPKA
Trigger: TGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp ACACAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCATGGTAGTTGATGATTaGTCTGAGGTGCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: TQGFGEIGEGITAFTFSLMVVDD*SEVPRN
Trigger: GTTTCTAGGCACCTCAGACCAATCATCAACTACCAT...GAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGATCTGTGTAGAAGACTaGGTGAGAAGTACATTTGCC +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTEICVED*VRSTFA
Trigger: GGCAAATGTACTTCTCACCCAGTCTTCTACACAGAT...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAAAGTTTACGTTCAGCATaGTGGGGTCGCTTTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGESLRSA*WGRFGS
Trigger: AGAACCAAAGCGACCCCATCATGCTGAACGTAAACT...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR TCA 90 bp ACACAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTTTGCCAAATTTCAATaGCAAGAAGGTTGGGTTTCC +
Preference number: 4 (lower is better)
Translates to: TQGFGEIGEGITAFTFSLFAKFQ*QEGWVS
Trigger: GGAAACCCAACCTTCTTGTCATTGAAATTTGGCAAA...GAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTGTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAACTCTCAGCACTGCCTTaGACAGAGCCCATAAAGATA +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGELSALP*TEPIKI
Trigger: TATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAG...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTGGGGCAAACAGAAAATaGACAGGTGCAAACATGGAA +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLGANRK*TGANME
Trigger: TTCCATGTTTGCACCTGTGCATTTTCTGTTTGCCCC...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTTCTTGTGTGCTTTGCTaGAATGTTCCATTGATAAGC +
Preference number: 4 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSSCVLC*NVPLIS
Trigger: GCTTATCAATGGAACATTCCAGCAAAGCACACAAGA...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTATTCATCTTGTTAGGTaGGTCATTGGAGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: RCLETELNLALAMNEENLIHLVR*VIGVVL
Trigger: CAGGACCACTCCAATGACCCACCTAACAAGATGAAT...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTCAGTGGACAAAGGTGTaGCATTTCACTATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSQWTKV*HFTIGY
Trigger: ATAACCAATAGTGAAATGCCACACCTTTGTCCACTG...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR TCA 90 bp CCAAATTTCAATGACAAGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCCTCTTAGGCCTAACATaGGATCAGGTAAGCAATATA +
Preference number: 4 (lower is better)
Translates to: PNFNDKKVGFPTDSQCTFLLGLT*DQVSNI
Trigger: TATATTGCTTACCTGATCTCATGTTAGGCCTAAGAG...GAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGAAATTTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAAGAAATACATCAGCACTaGAGTGAGCAGGACAGGTTT +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEEIHQH*SEQDRF
Trigger: AAACCTGTCCTGCTCACTGCAGTGCTGATGTATTTC...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAACTCTCTCTTGTTTCCTaGCACATGTACTTAATGGAA +
Preference number: 4 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKLSLVS*HMYLME
Trigger: TTCCATTAAGTACATGTGCCAGGAAACAAGAGAGAG...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTCATCAGGAATTGCCTTaGATTTTGGCAAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSHQELP*ILASDF
Trigger: AAAATCACTTGCCAAAATCCAAGGCAATTCCTGATG...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGCATCAGGAATTGCCTTaGATTTTGGCAAGTGATTTT +
Preference number: 4 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTEHQELP*ILASDF
Trigger: AAAATCACTTGCCAAAATCCAAGGCAATTCCTGATG...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR GCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAAAGGAGAAGGCATTACTaGCTTTACTTTCTCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGERRRHY*LYFLSL
Trigger: GAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCT...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAAATGGTAGTTGATGATTaGTCTGAGGTGCCTAGAAAC +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEMVVDD*SEVPRN
Trigger: GTTTCTAGGCACCTCAGACCAATCATCAACTACCAT...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CCA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAACAGTGGACAAAGGTGTaGCATTTCACTATTGGTTAT +
Preference number: 4 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGEQWTKV*HFTIGY
Trigger: ATAACCAATAGTGAAATGCCACACCTTTGTCCACTG...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS GCA 90 bp GTGTCTCAGGGGACTCCTGTGGTGTGGTTGGAGACTGAGGGTTTGTaGTCTGTGAGATCACGCTGGTCGCTTGCCCTGCCGGTCTTCCCG +
Preference number: 5 (lower is better)
Translates to: VSQGTPVVWLETEGL*SVRSRWSLALPVFP
Trigger: CGGGAAGACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACCACAGGAGTCCCCTGAGACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488639.6
CDS TCA 90 bp AGGGGACTCCTGTGGTGTGGTTGGAGACTGAGGGTTTGTGCTCTGTaGGATCACGCTGGTCGCTTGCCCTGCCGGTCTTCCCGAAATGCA +
Preference number: 5 (lower is better)
Translates to: RGLLWCGWRLRVCAL*DHAGRLPCRSSRNA
Trigger: TGCATTTCGGGAAGACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACCACAGGAGTCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488639.6
CDS TCA 90 bp TGGAGTGGTCCTGAGTGTGGTTGGAGACTGAGGGTTTGTGCTCTGTaGGATCACGCTGGTCGCTTGCCCTGCCGGTCTTCCCGAAATGCA +
Preference number: 5 (lower is better)
Translates to: WSGPECGWRLRVCAL*DHAGRLPCRSSRNA
Trigger: TGCATTTCGGGAAGACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACTCAGGACCACTCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000358394.7
CDS-3UTR CAA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAGATCACGCTGGTCGCTaGCCCTGCCGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTDHAGR*PCRSSR
Trigger: TCGGGAAGACCGGCAGGGCAAGCGACCAGCGTGATC...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR CAA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTATGCTGAGGGTGGTGTaGCCCTGGGACAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVMLRVV*PWDSFI
Trigger: GATGAAGCTGTCCCAGGGCAACACCACCCTCAGCAT...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGATGGGGAGGCTGAAGTaGGTTGTGTGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLMGRLK*VVWVAG
Trigger: CCCAGCAACCCACACAACCAACTTCAGCCTCCCCAT...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTCCTGTGACTGTGGTCTaGCTGGCTTTGATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVPVTVV*LALIWG
Trigger: GCCCCAAATCAAAGCCAGCAAGACCACAGTCACAGG...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTGATCACGCTGGTCGCTaGCCCTGCCGGTCTTCCCGA +
Preference number: 5 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSDHAGR*PCRSSR
Trigger: TCGGGAAGACCGGCAGGGCAAGCGACCAGCGTGATC...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCTTGGAGACTGAGGGTTaGTGCTCTGTGAGATCACGC +
Preference number: 5 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFLETEG*CSVRSR
Trigger: GCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAA...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR CAA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCATGGGGAGGCTGAAGTaGGTTGTGTGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSMGRLK*VVWVAG
Trigger: CCCAGCAACCCACACAACCAACTTCAGCCTCCCCAT...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTTGCTGGCTTTGATTaGGGGCTTTGCTACTACTGG +
Preference number: 5 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFLAGFD*GLCYYW
Trigger: CCAGTAGTAGCAAAGCCCCAAATCAAAGCCAGCAAG...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCAGTTGGTTGTGTGGGTaGCTGGGCTTCAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFSWLCG*LGFKVQ
Trigger: CTGAACTTTGAAGCCCAGCAACCCACACAACCAACT...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCATGGGGAGGCTGAAGTaGGTTGTGTGGGTTGCTGGG +
Preference number: 5 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSMGRLK*VVWVAG
Trigger: CCCAGCAACCCACACAACCAACTTCAGCCTCCCCAT...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGTCTCTGAAGACAGGCTaGCCAGAAGGATTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: RDLRDFGGFFHLRQSDWLSLKTG*PEGLGG
Trigger: ACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGA...CAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GTAGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTCCTCTCAGCACTGCCTaGAACAGAGCCCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: VGCSHFSRTKYTLAEAKVPLSTA*NRAHKD
Trigger: ATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAGG...AACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTAGTTGGTTGTGTGGGTaGCTGGGCTTCAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLASWLCG*LGFKVQ
Trigger: CTGAACTTTGAAGCCCAGCAACCCACACAACCAACT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCTCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCC +
Preference number: 5 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFSMTRR*GFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGA...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AAGGGACCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTAGATTCCAGTGTCATTaGTGGAGCAGGTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: KGPEGFRWFLSPKAIGLARFQCH*WSRSGS
Trigger: TGAACCTGACCTGCTCCACAAATGACACTGGAATCT...AGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGGTCCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTAGGGAGACTCTGGTTTTaGAAGAACCAACGGATGGAG +
Preference number: 5 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLGRLWF*KNQRME
Trigger: CTCCATCCGTTGGTTCTTCAAAAACCAGAGTCTCCC...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp CAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCTCTATGCTGAGGGTGGTGTaGCCCTGGGACAGCTTCATC +
Preference number: 5 (lower is better)
Translates to: QGFGEIGEGITAFTFSLSMLRVV*PWDSFI
Trigger: GATGAAGCTGTCCCAGGGCAACACCACCCTCAGCAT...AGAGAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCTTGGAGACTGAGGGTTaGTGCTCTGTGAGATCACGC +
Preference number: 5 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSLETEG*CSVRSR
Trigger: GCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAA...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000352591.9
CDS-3UTR CAA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTCTCTGAAGACAGGCTaGCCAGAAGGATTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSSLKTG*PEGLGG
Trigger: ACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGA...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCCTTGCTGGCTTTGATTaGGGGCTTTGCTACTACTGG +
Preference number: 5 (lower is better)
Translates to: GKESPSDEGERLEIHQHCLAGFD*GLCYYW
Trigger: CCAGTAGTAGCAAAGCCCCAAATCAAAGCCAGCAAG...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCGTGGTCTTGCTGGCTTaGATTTGGGGCTTTGCTACT +
Preference number: 5 (lower is better)
Translates to: GKESPSDEGERLEIHQHCVVLLA*IWGFAT
Trigger: AGTAGCAAAGCCCCAAATCAAAGCCAGCAAGACCAC...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTGGGAGACTCTGGTTTTaGAAGAACCAACGGATGGAG +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPGRLWF*KNQRME
Trigger: CTCCATCCGTTGGTTCTTCAAAAACCAGAGTCTCCC...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp GTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTAAGCATGATGGGGTCGCTTaGGTTCTTACTGATTGGGTT +
Preference number: 5 (lower is better)
Translates to: VGSLKTGLPEGLGGILAKHDGVA*VLTDWV
Trigger: AACCCAATCAGTAAGAACCAAAGCGACCCCATCATG...CTTAGCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCGTAACTTCATTCATCTaGTTAGGTGGGTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFVTSFI*LGGSLE
Trigger: CTCCAATGACCCACCTAACAAGATGAATGAAGTTAC...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTTGGTTGTGTGGGTaGCTGGGCTTCAAAGTTCAG +
Preference number: 5 (lower is better)
Translates to: GKESPSDEGERLEIHQHCSWLCG*LGFKVQ
Trigger: CTGAACTTTGAAGCCCAGCAACCCACACAACCAACT...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp CTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCCTGACAATGTACTTTCATCTATaGACACTGAGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: LPLLKDQIHLSRGQGFLTMYFHL*TLREGQ
Trigger: CTGCCCCTCTCTCAGTGTCAATAGATGAAAGTACAT...TGTCAGGAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGGTGCTCCCACTTCTCAAGGACCAAATACACCTTAGCAGAGGCCAAGGTTTCTACTTTCTCTCTCTCTaGTTTCCTGGCACATGTACT +
Preference number: 5 (lower is better)
Translates to: RVLPLLKDQIHLSRGQGFYFLSL*FPGTCT
Trigger: AGTACATGTGCCAGGAAACAAGAGAGAGAGAAAGTA...GAAACCTTGGCCTCTGCTAAGGTGTATTTGGTCCTTGAGAAGTGGGAGCACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTTCTCTGAAGACAGGCTaGCCAGAAGGATTAGGTGGT +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPSLKTG*PEGLGG
Trigger: ACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGA...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCCCTCTCAGCACTGCCTaGAACAGAGCCCATAAAGAT +
Preference number: 5 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSPLSTA*NRAHKD
Trigger: ATCTTTATGGGCTCTGTTCAAGGCAGTGCTGAGAGG...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp ATAACACAGCACAGCATGGATGAGGGAAAGTATGCACAGTCCGTGTCAGGGTTACCTAAGGCAATCGGATaGGCTGACATAGCTAAGCTA +
Preference number: 5 (lower is better)
Translates to: ITQHSMDEGKYAQSVSGLPKAIG*ADIAKL
Trigger: TAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGG...TAACCCTGACACGGACTGTGCATACTTTCCCTCATCCATGCTGTGCTGTGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATACCTAAGGCAATCGGATaGGCTGACATAGCTAAGCTA +
Preference number: 5 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIPKAIG*ADIAKL
Trigger: TAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGG...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATGCTGGAATGTTCCATaGATAAGCCAGGAGTACTGT +
Preference number: 5 (lower is better)
Translates to: STPTGERNLLVMRVRDLKCWNVP*ISQEYC
Trigger: ACAGTACTCCTGGCTTATCAATGGAACATTCCAGCA...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TCTAGTGGGTTCTCTGAAGACAGGCTTGCCAGAAGGATTAGGTGGTATTCTAGCTGCTGGAATGTTCCATaGATAAGCCAGGAGTACTGT +
Preference number: 5 (lower is better)
Translates to: SSGFSEDRLARRIRWYSSCWNVP*ISQEYC
Trigger: ACAGTACTCCTGGCTTATCAATGGAACATTCCAGCA...GCTAGAATACCACCTAATCCTTCTGGCAAGCCTGTCTTCAGAGAACCCACTAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTTCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCC +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPSMTRR*GFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGA...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCCCTAAGGCAATCGGATaGGCTGACATAGCTAAGCTA +
Preference number: 5 (lower is better)
Translates to: GKESPSDEGERLEIHQHCPKAIG*ADIAKL
Trigger: TAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGG...GCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTTGCTGGAATGTTCCATaGATAAGCCAGGAGTACTGT +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPCWNVP*ISQEYC
Trigger: ACAGTACTCCTGGCTTATCAATGGAACATTCCAGCA...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp ACACAAGGCTTTGGAGAAATAGGAGAAGGCATTACTGCCTTTACTTTCTCTCTCGTGGTCTTGCTGGCTTaGATTTGGGGCTTTGCTACT +
Preference number: 5 (lower is better)
Translates to: TQGFGEIGEGITAFTFSLVVLLA*IWGFAT
Trigger: AGTAGCAAAGCCCCAAATCAAAGCCAGCAAGACCAC...GAGAGAGAAAGTAAAGGCAGTAATGCCTTCTCCTATTTCTCCAAAGCCTTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTCCTGTGACTGTGGTCTaGCTGGCTTTGATTTGGGGC +
Preference number: 5 (lower is better)
Translates to: RCLETELNLALAMNEENLPVTVV*LALIWG
Trigger: GCCCCAAATCAAAGCCAGCAAGACCACAGTCACAGG...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp ATAACCTCAAGGCTATGGCAAATCCGAATTAGAGTGATAGGACAGGACTGGGGGTTCTTACTGATTGGGTaGAAGACCTCACACCAATAC +
Preference number: 5 (lower is better)
Translates to: ITSRLWQIRIRVIGQDWGFLLIG*KTSHQY
Trigger: GTATTGGTGTGAGGTCTTCAACCCAATCAGTAAGAA...CCCCCAGTCCTGTCCTATCACTCTAATTCGGATTTGCCATAGCCTTGAGGTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGTAACTTCATTCATCTaGTTAGGTGGGTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIVTSFI*LGGSLE
Trigger: CTCCAATGACCCACCTAACAAGATGAATGAAGTTAC...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAGTAACTTCATTCATCTaGTTAGGTGGGTCATTGGAG +
Preference number: 5 (lower is better)
Translates to: STPTGERNLLVMRVRDLKVTSFI*LGGSLE
Trigger: CTCCAATGACCCACCTAACAAGATGAATGAAGTTAC...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCATGTACTTTCATCTATaGACACTGAGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSMYFHL*TLREGQ
Trigger: CTGCCCCTCTCTCAGTGTCAATAGATGAAAGTACAT...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTATGTACTTTCATCTATaGACACTGAGAGAGGGGCAG +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPMYFHL*TLREGQ
Trigger: CTGCCCCTCTCTCAGTGTCAATAGATGAAAGTACAT...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACTTTCTCTCTCTCTaGTTTCCTGGCACATGTACT +
Preference number: 5 (lower is better)
Translates to: STPTGERNLLVMRVRDLKYFLSL*FPGTCT
Trigger: AGTACATGTGCCAGGAAACAAGAGAGAGAGAAAGTA...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCTTCTTACTGATTGGGTaGAAGACCTCACACCAATAC +
Preference number: 5 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSFLLIG*KTSHQY
Trigger: GTATTGGTGTGAGGTCTTCAACCCAATCAGTAAGAA...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp AGAAGGTTGGGTTTCCTACAGACTCCCAATGTACTTTCATCTATTGACACTGAGCATGATGGGGTCGCTTaGGTTCTTACTGATTGGGTT +
Preference number: 5 (lower is better)
Translates to: RRLGFLQTPNVLSSIDTEHDGVA*VLTDWV
Trigger: AACCCAATCAGTAAGAACCAAAGCGACCCCATCATG...CTCAGTGTCAATAGATGAAAGTACATTGGGAGTCTGTAGGAAACCCAACCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp CCTGAGGGATTTCGGTGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATATTCCCAAAGTCAGCTTaGCCAAATTTCAATGACAAG +
Preference number: 5 (lower is better)
Translates to: PEGFRWFLSPKAIGLADIFPKSA*PNFNDK
Trigger: CTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAA...TATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCACCGAAATCCCTCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAATTCCCAAAGTCAGCTTaGCCAAATTTCAATGACAAG +
Preference number: 5 (lower is better)
Translates to: STPTGERNLLVMRVRDLKFPKSA*PNFNDK
Trigger: CTTGTCATTGAAATTTGGCAAAGCTGACTTTGGGAA...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TCTACCCCTACAGGGGAAAGGAATCTCCTAGTGATGAGGGTGAGAGACTTGAAAATTTTCCATCAGGAATaGCCTTGGATTTTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: STPTGERNLLVMRVRDLKIFHQE*PWILAS
Trigger: ACTTGCCAAAATCCAAGGCAATTCCTGATGGAAAAT...TTTCAAGTCTCTCACCCTCATCACTAGGAGATTCCTTTCCCCTGTAGGGGTAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AATCTCCTAGTGATGAGGGTGAGAGACTTGAAATACATCAGCACTGCAGTGAGCCAAGTTCCTAGCAGATaGTGTTTATCAGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: NLLVMRVRDLKYISTAVSQVPSR*CLSEAG
Trigger: ACCAGCTTCTGATAAACACAATCTGCTAGGAACTTG...GCTCACTGCAGTGCTGATGTATTTCAAGTCTCTCACCCTCATCACTAGGAGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTCAAGTTCCTAGCAGATaGTGTTTATCAGAAGCTGGT +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPQVPSR*CLSEAG
Trigger: ACCAGCTTCTGATAAACACAATCTGCTAGGAACTTG...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp GATTCCATCTGTGTAGAAGACTGGGTGAGAAGTACATTTGCCTGTCTTCCTCCTATTTTCCATCAGGAATaGCCTTGGATTTTGGCAAGT +
Preference number: 5 (lower is better)
Translates to: DSICVEDWVRSTFACLPPIFHQE*PWILAS
Trigger: ACTTGCCAAAATCCAAGGCAATTCCTGATGGAAAAT...AGGAGGAAGACAGGCAAATGTACTTCTCACCCAGTCTTCTACACAGATGGAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp AGGTGCCTAGAAACTGAGTTAAATCTAGCTCTAGCCATGAATGAAGAAAACCTTAGATTCCAGTGTCATTaGTGGAGCAGGTCAGGTTCA +
Preference number: 5 (lower is better)
Translates to: RCLETELNLALAMNEENLRFQCH*WSRSGS
Trigger: TGAACCTGACCTGCTCCACAAATGACACTGGAATCT...AAGGTTTTCTTCATTCATGGCTAGAGCTAGATTTAACTCAGTTTCTAGGCACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000161559.11
ENST00000403444.7
CDS-3UTR CAA 90 bp TTTGATTTTCTTGTGTTTGGTGAGTTCACACAAGGCTTTGGAGAAATAGGAGAATCAATGACAAGAAGGTaGGGTTTCCTACAGACTCCC +
Preference number: 5 (lower is better)
Translates to: FDFLVFGEFTQGFGEIGESMTRR*GFLQTP
Trigger: GGGAGTCTGTAGGAAACCCAACCTTCTTGTCATTGA...TTCTCCTATTTCTCCAAAGCCTTGTGTGAACTCACCAAACACAAGAAAATCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS-3UTR CAA 90 bp TGGTTTCTTTCACCTAAGGCAATCGGATTGGCTGACATAGCTAAGCTAAGTAAATACTTTCTCTCTCTCTaGTTTCCTGGCACATGTACT +
Preference number: 5 (lower is better)
Translates to: WFLSPKAIGLADIAKLSKYFLSL*FPGTCT
Trigger: AGTACATGTGCCAGGAAACAAGAGAGAGAGAAAGTA...TTTACTTAGCTTAGCTATGTCAGCCAATCCGATTGCCTTAGGTGAAAGAAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000403444.7
CDS GCA 72 bp GGGACTCCTGTGGTGTGGTTGGAGACTGAGGGTTTGTaGTCTGTGAGATCACGCTGGTCGCTTGCCCTGCCG +
Preference number: 6 (lower is better)
Translates to: GTPVVWLETEGL*SVRSRWSLALP
Trigger: CGGCAGGGCAAGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACCACAGGAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488639.6
CDS TCA 72 bp CCTGAGTGTGGTTGGAGACTGAGGGTTTGTGCTCTGTaGGATCACGCTGGTCGCTTGCCCTGCCGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: PECGWRLRVCAL*DHAGRLPCRSS
Trigger: GGAAGACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACTCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000358394.7
CDS TCA 72 bp CTGTGGTGTGGTTGGAGACTGAGGGTTTGTGCTCTGTaGGATCACGCTGGTCGCTTGCCCTGCCGGTCTTCC +
Preference number: 6 (lower is better)
Translates to: LWCGWRLRVCAL*DHAGRLPCRSS
Trigger: GGAAGACCGGCAGGGCAAGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACCACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488639.6
CDS TCA 72 bp TGTGTCTCAGGGGACTCCTGTGGTGTGGTTGGAGACTaGGGGTTTGTGCTCTGTGAGATCACGCTGGTCGCT +
Preference number: 6 (lower is better)
Translates to: CVSGDSCGVVGD*GFVLCEITLVA
Trigger: AGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACCACAGGAGTCCCCTGAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488639.6
CDS TCA 72 bp TGGGTCATTGGAGTGGTCCTGAGTGTGGTTGGAGACTaGGGGTTTGTGCTCTGTGAGATCACGCTGGTCGCT +
Preference number: 6 (lower is better)
Translates to: WVIGVVLSVVGD*GFVLCEITLVA
Trigger: AGCGACCAGCGTGATCTCACAGAGCACAAACCCTCAGTCTCCAACCACACTCAGGACCACTCCAATGACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000161559.11
ENST00000352591.9
ENST00000358394.7
CDS TCA 72 bp CATGGAAATGCAAAGCTGACTTCAGGTGATTCTAGCTaGAGGAGGTGGCAGTTGGAGGGTGGGGAGTTTAAG +
Preference number: 6 (lower is better)
Translates to: HGNAKLTSGDSS*RRWQLEGGEFK
Trigger: CTTAAACTCCCCACCCTCCAACTGCCACCTCCTTCAGCTAGAATCACCTGAAGTCAGCTTTGCATTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465051.1
CDS TCA 72 bp CTGCCTCCTGTGAGTTTTATCCATTTTGCACACCATTaGCAGAGTAATCCTAGAGGGACATATAGGAAGGGG +
Preference number: 6 (lower is better)
Translates to: LPPVSFIHFAHH*QSNPRGTYRKG
Trigger: CCCCTTCCTATATGTCCCTCTAGGATTACTCTGTCAATGGTGTGCAAAATGGATAAAACTCACAGGAGGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000344391.9
ENST00000377806.7