RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDYL2 (Homo sapiens)

Ensembl gene IDs: ENSG00000166446

Ensembl transcript IDs: ENST00000561616.2, ENST00000562753.1, ENST00000562812.5, ENST00000563890.5, ENST00000566173.3, ENST00000567924.1, ENST00000570137.7

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGAAGGGCAGGGAGGTGGGGGAGGCCA +
Preference number: 1 (lower is better)
Translates to: GKDSGAWRSPGKIQP*TALWPGRAGRWGRP
Trigger: TGGCCTCCCCCACCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 90 bp GGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTaGCCAGGAAGGGCAGGGAGGTGGGGGAGGCCAAGTATGCTGCGT +
Preference number: 1 (lower is better)
Translates to: GAWRSPGKIQPWTAL*PGRAGRWGRPSMLR
Trigger: ACGCAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAGGGCAGG +
Preference number: 1 (lower is better)
Translates to: AFQQVGKGQRCLAEP*EDTALDSSLARKGR
Trigger: CCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR GCA 90 bp CTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTaGTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTG +
Preference number: 1 (lower is better)
Translates to: LDRHGAFQQVGKGQR*LAEPWEDTALDSSL
Trigger: CAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 90 bp ACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTaGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCA +
Preference number: 1 (lower is better)
Translates to: TVMVHFSKWGKDSGA*RSPGKIQPWTALWP
Trigger: TGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 90 bp AAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTaGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAG +
Preference number: 1 (lower is better)
Translates to: KWSSPSWTVMVHFSK*GKDSGAWRSPGKIQ
Trigger: CTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR GCA 90 bp TCAGAAGAATGTGAAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTaGATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCC +
Preference number: 1 (lower is better)
Translates to: SEECESGLPLPGPSW*ISASGERTAVLGGA
Trigger: GGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTTCACATTCTTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 90 bp GAGTCAGAAGAATGTGAAAGTGGTCTTCCCCTTCCTGGACCGTCATaGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGA +
Preference number: 1 (lower is better)
Translates to: ESEECESGLPLPGPS*CISASGERTAVLGG
Trigger: TCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTTCACATTCTTCTGACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 90 bp TCTCAGGTAGGGCCTATCCCCACTCCTGCCCAACATCACGCAATTTaGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTT +
Preference number: 1 (lower is better)
Translates to: SQVGPIPTPAQHHAI*DWVCFRIIQAKRAL
Trigger: AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTTGGGCAGGAGTGGGGATAGGCCCTACCTGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 90 bp GACCTCCAGACAGCTCAGCAGAGTGGGAACTCTTCCCCATCCCCCTaGCCAATACCAGAAATCACTGATCACATGGAAGCAACAGACTGC +
Preference number: 1 (lower is better)
Translates to: DLQTAQQSGNSSPSP*PIPEITDHMEATDC
Trigger: GCAGTCTGTTGCTTCCATGTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTGCTGAGCTGTCTGGAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 90 bp ATGGACAAAGGGGAGGGTGCACAGGACTTTAATTCCATCCTCCTCTaGCTGAAGGAGAGGTTTCCCCTCCTTCCTGACCCTCATGAACTC +
Preference number: 1 (lower is better)
Translates to: MDKGEGAQDFNSILL*LKERFPLLPDPHEL
Trigger: GAGTTCATGAGGGTCAGGAAGGAGGGGAAACCTCTCCTTCAGCCAGAGGAGGATGGAATTAAAGTCCTGTGCACCCTCCCCTTTGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp AGGACACGAGGAAATGGACACAACCCTACGTATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGGCAGACACTGTGCTCTGGTTTCCGA +
Preference number: 1 (lower is better)
Translates to: RTRGNGHNPTYKETP*QTPWPGQTLCSGFR
Trigger: TCGGAAACCAGAGCACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATACGTAGGGTTGTGTCCATTTCCTCGTGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR TCA 90 bp AGCTCAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTaGTTGCCAGGAAAAGATAAAGGACCACAGAGAGTTAGAGAACTG +
Preference number: 1 (lower is better)
Translates to: SSGPRIHSTCPAQCT*LPGKDKGPQRVREL
Trigger: CAGTTCTCTAACTCTCTGTGGTCCTTTATCTTTTCCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTGAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp CAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTaGCAGGAAAAGATAAAGGACCACAGAGAGTTAGAGAACTGTCAC +
Preference number: 1 (lower is better)
Translates to: QGHEYIPPALPSAPD*QEKIKDHRELENCH
Trigger: GTGACAGTTCTCTAACTCTCTGTGGTCCTTTATCTTTTCCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp CCCACAGCTATTCTTTCAAACCCAAAGGTAATTGCAGGACGGGGCTaGCAAAATGAGCCGCAATTCCTCAAAGACCTGCCCAGGCTCTTG +
Preference number: 1 (lower is better)
Translates to: PTAILSNPKVIAGRG*QNEPQFLKDLPRLL
Trigger: CAAGAGCCTGGGCAGGTCTTTGAGGAATTGCGGCTCATTTTGGCAGCCCCGTCCTGCAATTACCTTTGGGTTTGAAAGAATAGCTGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp TCGACAAGGAATCTGGGGCCAACTGCCAGGGTCAGGAGCAGGAAATaGCATTTGTTCAGAACAAATGATGGACCAGCAGCCTTCCCTATG +
Preference number: 1 (lower is better)
Translates to: STRNLGPTARVRSRK*HLFRTNDGPAAFPM
Trigger: CATAGGGAAGGCTGCTGGTCCATCATTTGTTCTGAACAAATGGCATTTCCTGCTCCTGACCCTGGCAGTTGGCCCCAGATTCCTTGTCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp TATTCTTTCAAACCCAAAGGTAATTGCAGGACGGGGCTGCCAAAATaGGCCGCAATTCCTCAAAGACCTGCCCAGGCTCTTGGGAGTGAC +
Preference number: 1 (lower is better)
Translates to: YSFKPKGNCRTGLPK*AAIPQRPAQALGSD
Trigger: GTCACTCCCAAGAGCCTGGGCAGGTCTTTGAGGAATTGCGGCTCATTTTGGCAGCCCCGTCCTGCAATTACCTTTGGGTTTGAAAGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp TCACCAGAACTCTCTCTTCTAAGCCTGCCTCACCTCCATAAGCTGTaGCCACTTCTTGCTGCCTTATTCCACTCTCTTCAAAGAAGGGCC +
Preference number: 1 (lower is better)
Translates to: SPELSLLSLPHLHKL*PLLAALFHSLQRRA
Trigger: GGCCCTTCTTTGAAGAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGCTTATGGAGGTGAGGCAGGCTTAGAAGAGAGAGTTCTGGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp GAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTaGTCACATGGAAGCAACAGACTGCAGGATCCAAGTTCAGTCATT +
Preference number: 1 (lower is better)
Translates to: EWELFPIPLANTRNH*SHGSNRLQDPSSVI
Trigger: AATGACTGAACTTGGATCCTGCAGTCTGTTGCTTCCATGTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp ATTCTAGACAGTATGCTATTCTCAGGTAGGGCCTATCCCCACTCCTaGCCAACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCAT +
Preference number: 1 (lower is better)
Translates to: ILDSMLFSGRAYPHS*PTSRNLGLGLFQDH
Trigger: ATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTTGGGCAGGAGTGGGGATAGGCCCTACCTGAGAATAGCATACTGTCTAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp AAGGACCATGTCTCTAGATCTGGTGTAGACTATCAACGTGTTCTTTaGAACTCAAAGCTCAGGGCCACGAATACATTCCACCTGCCCTGC +
Preference number: 1 (lower is better)
Translates to: KDHVSRSGVDYQRVL*NSKLRATNTFHLPC
Trigger: GCAGGGCAGGTGGAATGTATTCGTGGCCCTGAGCTTTGAGTTTCAAAGAACACGTTGATAGTCTACACCAGATCTAGAGACATGGTCCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp ATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCACAATCATTTTaGTCATTGGTCTGGAAATTCCCTAAGATTGGTCGTCCTCTGACA +
Preference number: 1 (lower is better)
Translates to: ICVGKETEARCAQSF*SLVWKFPKIGRPLT
Trigger: TGTCAGAGGACGACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAATGATTGTGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 90 bp CAGTATGAAGGTGTCTCTGGAAAACCTATCCTTGGTCTATTCTTATaGCCAAAGACAATCACCAAGGTGTCTATCTGGTCCCTGCCGCCA +
Preference number: 1 (lower is better)
Translates to: QYEGVSGKPILGLFL*PKTITKVSIWSLPP
Trigger: TGGCGGCAGGGACCAGATAGACACCTTGGTGATTGTCTTTGGCCATAAGAATAGACCAAGGATAGGTTTTCCAGAGACACCTTCATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp AGACCAAGCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTaGGGCCAGGTGTGCACAATCATTTTGCTCATTGGTCTGGAAATT +
Preference number: 1 (lower is better)
Translates to: RPSPNSHTDLRRKGD*GQVCTIILLIGLEI
Trigger: AATTTCCAGACCAATGAGCAAAATGATTGTGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGCTTGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 90 bp AAGGAGACTGAGGCCAGGTGTGCACAATCATTTTGCTCATTGGTCTaGAAATTCCCTAAGATTGGTCGTCCTCTGACACCCGATCTAAAT +
Preference number: 1 (lower is better)
Translates to: KETEARCAQSFCSLV*KFPKIGRPLTPDLN
Trigger: ATTTAGATCGGGTGTCAGAGGACGACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAATGATTGTGCACACCTGGCCTCAGTCTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp CACATTTGCTTTCTCAAAGGAGGAGATAAGATCCAGATAGAGCTGTaGCAACAGGCATTTGGGCAAAAGCAGGTGTCTCCCTATAGTAAC +
Preference number: 1 (lower is better)
Translates to: HICFLKGGDKIQIEL*QQAFGQKQVSPYSN
Trigger: GTTACTATAGGGAGACACCTGCTTTTGCCCAAATGCCTGTTGTCACAGCTCTATCTGGATCTTATCTCCTCCTTTGAGAAAGCAAATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp AACCAAAATACAGACTTTCACCACCCCCGTTACACCCAGGACCTGTaGCTTAACAGCAAGATTTCCACCTTAGAAATGGTTTCACATTCC +
Preference number: 1 (lower is better)
Translates to: NQNTDFHHPRYTQDL*LNSKISTLEMVSHS
Trigger: GGAATGTGAAACCATTTCTAAGGTGGAAATCTTGCTGTTAAGTCACAGGTCCTGGGTGTAACGGGGGTGGTGAAAGTCTGTATTTTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp AATGCCATTTGTTCAGAACAAATGATGGACCAGCAGCCTTCCCTATaGCCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAA +
Preference number: 1 (lower is better)
Translates to: NAICSEQMMDQQPSL*PCLNHVYSMKVSLE
Trigger: TTCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGCTGCTGGTCCATCATTTGTTCTGAACAAATGGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp TATTCTTATGGCCAAAGACAATCACCAAGGTGTCTATCTGGTCCCTaGCGCCATCAACTCAATCAAACTCTTCGGATTAGCCATGAATTA +
Preference number: 1 (lower is better)
Translates to: YSYGQRQSPRCLSGP*RHQLNQTLRISHEL
Trigger: TAATTCATGGCTAATCCGAAGAGTTTGATTGAGTTGATGGCGGCAGGGACCAGATAGACACCTTGGTGATTGTCTTTGGCCATAAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 90 bp TCTCCTAAGGACAAACCTAAGGAACTAGTATTCTATTATTACAGCTaGGAACCGTTTTACACAGAGGTGCAGCGCTATTCCTTTTGTCCA +
Preference number: 1 (lower is better)
Translates to: SPKDKPKELVFYYYS*EPFYTEVQRYSFCP
Trigger: TGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAATAATAGAATACTAGTTCCTTAGGTTTGTCCTTAGGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 90 bp TCATTCTTAGTGATTTTGATGGCTGTTACCCAGACATTATTTCTATaGCGGAAGGGGCACATTAAGTACATCAGCATTAGGCTGTGTCTT +
Preference number: 1 (lower is better)
Translates to: SFLVILMAVTQTLFL*RKGHIKYISIRLCL
Trigger: AAGACACAGCCTAATGCTGATGTACTTAATGTGCCCCTTCCGGCATAGAAATAATGTCTGGGTAACAGCCATCAAAATCACTAAGAATGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGGAAGGGCAGGGAGGTaGGGGAGGCCAAGTATGCTG +
Preference number: 2 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDGRAGR*GRPSML
Trigger: CAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CAA 90 bp GACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTaGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCC +
Preference number: 2 (lower is better)
Translates to: DRHGAFQQVGKGQRC*AEPWEDTALDSSLA
Trigger: GGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 2 (lower is better)
Translates to: ISASGERTAVLGGALGRYNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGAGGAAGGGCAGGGAGGTaGGGGAGGCCAAGTATGCTG +
Preference number: 2 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGGRAGR*GRPSML
Trigger: CAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCC...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGAAGGGCAGGGAGGTaGGGGAGGCCAAGTATGCTG +
Preference number: 2 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSGRAGR*GRPSML
Trigger: CAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCC...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGGGAAAGGACAGCGGTaGTTGGCGGAGCCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: RESHDGQVSKSEALCRHSGKGQR*LAEPWE
Trigger: TTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PGPSWCISASGERTAVLGGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR TCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTTATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: ASGERTAVLGGALGRYSLYKETP*QTPWPG
Trigger: CCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATA...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTCCGGGGCAGACACTGTaGTCTGGTTTCCGAAACACA +
Preference number: 2 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAPGQTL*SGFRNT
Trigger: TGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCGG...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGTGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGAC +
Preference number: 2 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQCLAEP*EDTALD
Trigger: GTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCA...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCGGAGGCCAAGTATGCTaGGTTTTCCATCCATTACAC +
Preference number: 2 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPGGQVC*VFHPLH
Trigger: GTGTAATGGATGGAAAACGCAGCATACTTGGCCTCC...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGAGGCCAAGTATGCTaGGTTTTCCATCCATTACAC +
Preference number: 2 (lower is better)
Translates to: ASGERTAVLGGALGRYSLGGQVC*VFHPLH
Trigger: GTGTAATGGATGGAAAACGCAGCATACTTGGCCTCC...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGGGGGAGGCCAAGTATaGTGCGTTTTCCATCCATTA +
Preference number: 2 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRGGGQV*CVFHPL
Trigger: TAATGGATGGAAAACGCAGCATACTTGGCCTCCCCC...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACGCAGACACTGTGCTCTaGTTTCCGAAACACAGGGCA +
Preference number: 2 (lower is better)
Translates to: ISASGERTAVLGGALGRYADTVL*FPKHRA
Trigger: TGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGC...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 2 (lower is better)
Translates to: RESHDGQVSKSEALCRHSGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CCA 90 bp CCTTACCCAGAATGGACGTTTCCAAGTCATCGACAAGGAATCTGGGGCCAACTGGACAGCTCAGCAGAGTaGGAACTCTTCCCCATCCCC +
Preference number: 2 (lower is better)
Translates to: PYPEWTFPSHRQGIWGQLDSSAE*ELFPIP
Trigger: GGGGATGGGGAAGAGTTCCCACTCTGCTGAGCTGTC...CAGTTGGCCCCAGATTCCTTGTCGATGACTTGGAAACGTCCATTCTGGGTAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 90 bp AGGAATCTGGGGCCAACTGCCAGGGTCAGGAGCAGGAAATGCCATTaGTTCAGAACAAATGATGGACCAGCAGCCTTCCCTATGACCGTG +
Preference number: 2 (lower is better)
Translates to: RNLGPTARVRSRKCH*FRTNDGPAAFPMTV
Trigger: CACGGTCATAGGGAAGGCTGCTGGTCCATCATTTGTTCTGAACAAATGGCATTTCCTGCTCCTGACCCTGGCAGTTGGCCCCAGATTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR TCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSYKETP*QTPWPG
Trigger: CCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATA...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR TCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGATATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGG +
Preference number: 2 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGYKETP*QTPWPG
Trigger: CCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATA...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCACCTGGACCGTCATGGTaGATTTCAGCAAGTGGGGAA +
Preference number: 2 (lower is better)
Translates to: ALIVTQICVGKETEARCAPGPSW*ISASGE
Trigger: TTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGTGCATTTCAGCAAGTaGGGAAAGGACAGCGGTGCT +
Preference number: 2 (lower is better)
Translates to: RESHDGQVSKSEALCRHSVHFSK*GKDSGA
Trigger: AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCAC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CAA 90 bp GAAGGAGAGTTCCACTGCATGGCTAACAGGATGGGAGGGAGTGGATaGCTAGAAAGGTCCCTGACTAAAGAGGTGTCCTCAATTGCCCAC +
Preference number: 2 (lower is better)
Translates to: EGEFHCMANRMGGSG*LERSLTKEVSSIAH
Trigger: GTGGGCAATTGAGGACACCTCTTTAGTCAGGGACCTTTCTAGCAATCCACTCCCTCCCATCCTGTTAGCCATGCAGTGGAACTCTCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR TCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTAACCAGAGAGAGCCATaGTGGCCAAGTCTCCAAGTC +
Preference number: 2 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALNQREP*WPSLQV
Trigger: GACTTGGAGACTTGGCCATCATGGCTCTCTCTGGTT...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR GCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGGGGAGGCCAAGTATaGTGCGTTTTCCATCCATTA +
Preference number: 2 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKGGGQV*CVFHPL
Trigger: TAATGGATGGAAAACGCAGCATACTTGGCCTCCCCC...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CAA 90 bp GTCGGAAAGGAGACTGAGGCCAGGTGTGCACAATCATTTTGCTCATaGGTCTGGAAATTCCCTAAGATTGGTCGTCCTCTGACACCCGAT +
Preference number: 2 (lower is better)
Translates to: VGKETEARCAQSFCS*VWKFPKIGRPLTPD
Trigger: ATCGGGTGTCAGAGGACGACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAATGATTGTGCACACCTGGCCTCAGTCTCCTTTCCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR GCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATCCGGGGCAGACACTGTaGTCTGGTTTCCGAAACACA +
Preference number: 2 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDPGQTL*SGFRNT
Trigger: TGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCGG...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR GCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTGGAGGCCAAGTATGCTaGGTTTTCCATCCATTACAC +
Preference number: 2 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALGGQVC*VFHPLH
Trigger: GTGTAATGGATGGAAAACGCAGCATACTTGGCCTCC...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR GCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTAACATTCCACCTGCCCTaGCCAGTGCACCTGATTGCC +
Preference number: 2 (lower is better)
Translates to: LFTNSINCHTVRIYGEILTFHLP*PVHLIA
Trigger: GGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGT...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CCA 90 bp CTCCATAAGCTGTGCCCACTTCTTGCTGCCTTATTCCACTCTCTTCAAAGAAGGTGGTCTTCCCCTTCCTaGACCGTCATGGTGCATTTC +
Preference number: 2 (lower is better)
Translates to: LHKLCPLLAALFHSLQRRWSSPS*TVMVHF
Trigger: GAAATGCACCATGACGGTCCAGGAAGGGGAAGACCA...CCTTCTTTGAAGAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGCTTATGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR TCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAACGGGGCTGCCAAAATaGGCCGCAATTCCTCAAAGA +
Preference number: 2 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGTGLPK*AAIPQR
Trigger: TCTTTGAGGAATTGCGGCTCATTTTGGCAGCCCCGT...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR GCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTATAGTCACACAGATTTaGGTCGGAAAGGAGACTGAG +
Preference number: 2 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALIVTQI*VGKETE
Trigger: CTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTAT...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTATTACAGGATCCTACATaGACAAAGGGGAGGGTGCAC +
Preference number: 2 (lower is better)
Translates to: LFTNSINCHTVRIYGEILLQDPT*TKGRVH
Trigger: GTGCACCCTCCCCTTTGTCCATGTAGGATCCTGTAA...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR TCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAAAAAATCCCTCCATCCTaGGAATCTGAGAATCTAGCT +
Preference number: 2 (lower is better)
Translates to: HELLKETRFPGREPRSSEKIPPS*ESENLA
Trigger: AGCTAGATTCTCAGATTCTCAGGATGGAGGGATTTT...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CCA 90 bp CCTTACCCAGAATGGACGTTTCCAAGTCATCGACAAGGAATCTGGGGCCAACTGGTGGAACTGACTGTATaGAAACAACCAAAATACAGA +
Preference number: 2 (lower is better)
Translates to: PYPEWTFPSHRQGIWGQLVELTV*KQPKYR
Trigger: TCTGTATTTTGGTTGTTTCCATACAGTCAGTTCCAC...CAGTTGGCCCCAGATTCCTTGTCGATGACTTGGAAACGTCCATTCTGGGTAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR TCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTAGTGGAAGATCAAAAATaGAAGTCTGAGCTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: LFTNSINCHTVRIYGEILVEDQK*KSELCL
Trigger: GAGACAGAGCTCAGACTTTCATTTTTGATCTTCCAC...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 90 bp CTGATCACATGGAAGCAACAGACTGCAGGATCCAAGTTCAGTCATTaGCCCCAAAGAAAGAAGTCTTATTCTAGACAGTATGCTATTCTC +
Preference number: 2 (lower is better)
Translates to: LITWKQQTAGSKFSH*PQRKKSYSRQYAIL
Trigger: GAGAATAGCATACTGTCTAGAATAAGACTTCTTTCTTTGGGGCAAATGACTGAACTTGGATCCTGCAGTCTGTTGCTTCCATGTGATCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 90 bp TTCAGTCCACCCTGCAGCAAAAAGATTTCACCTGCTTTCACCCAATaGGTGGAACTGACTGTATGGAAACAACCAAAATACAGACTTTCA +
Preference number: 2 (lower is better)
Translates to: FSPPCSKKISPAFTQ*VELTVWKQPKYRLS
Trigger: TGAAAGTCTGTATTTTGGTTGTTTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGAAATCTTTTTGCTGCAGGGTGGACTGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR GCA 90 bp CTCCATAAGCTGTGCCCACTTCTTGCTGCCTTATTCCACTCTCTTCAAAGAAGGTACAATATCTGGGTTTaGAAATCACTCAATTGGGTT +
Preference number: 2 (lower is better)
Translates to: LHKLCPLLAALFHSLQRRYNIWV*KSLNWV
Trigger: AACCCAATTGAGTGATTTGCAAACCCAGATATTGTA...CCTTCTTTGAAGAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGCTTATGGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 90 bp TCTCTACTACTTTCTCATAGCTATCCAATGTCATTCTTAGTGATTTaGATGGCTGTTACCCAGACATTATTTCTATGCCGGAAGGGGCAC +
Preference number: 2 (lower is better)
Translates to: SLLLSHSYPMSFLVI*MAVTQTLFLCRKGH
Trigger: GTGCCCCTTCCGGCATAGAAATAATGTCTGGGTAACAGCCATCAAAATCACTAAGAATGACATTGGATAGCTATGAGAAAGTAGTAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATAGGAGATCTCATTCCTaGTCATTGCTCCCTATGTAC +
Preference number: 2 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHRRSHS*SLLPMY
Trigger: GTACATAGGGAGCAATGACCAGGAATGAGATCTCCT...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 90 bp CTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAAAACCTATCCTaGGTCTATTCTTATGGCCAAAGACAATCACCAAGGTGTCTATCT +
Preference number: 2 (lower is better)
Translates to: LNHVYSMKVSLENLS*VYSYGQRQSPRCLS
Trigger: AGATAGACACCTTGGTGATTGTCTTTGGCCATAAGAATAGACCAAGGATAGGTTTTCCAGAGACACCTTCATACTGTAAACATGGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR GCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTAGGAAAAACATTTTCATaGTTCAGAGAGAACATTTCC +
Preference number: 2 (lower is better)
Translates to: LFTNSINCHTVRIYGEILGKTFS*FRENIS
Trigger: GGAAATGTTCTCTCTGAAGCATGAAAATGTTTTTCC...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR TCA 90 bp ACAACCAGAGGTCTGGTATTTTCCATCCCAAATCTATTTGCTGTAAGTTACCTGAAACTAGAAAACAGATaGGTCATTTCAGCTTCTGGA +
Preference number: 2 (lower is better)
Translates to: TTRGLVFSIPNLFAVSYLKLENR*VISASG
Trigger: TCCAGAAGCTGAAATGACTCATCTGTTTTCTAGTTT...CAGGTAACTTACAGCAAATAGATTTGGGATGGAAAATACCAGACCTCTGGTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp AGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGAAGGGCAGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: SGAWRSPGKIQP*TALWPGRAGRW
Trigger: CCACCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 72 bp CAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGG +
Preference number: 3 (lower is better)
Translates to: QVGKGQRCLAEP*EDTALDSSLAR
Trigger: CCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 72 bp TCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTaGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: SPSWTVMVHFSK*GKDSGAWRSPG
Trigger: CCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CAA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 3 (lower is better)
Translates to: ASGERTAVLGGALGRYSLTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CAA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 3 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR CCA 72 bp GTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTaGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCT +
Preference number: 3 (lower is better)
Translates to: VHFSKWGKDSGA*RSPGKIQPWTA
Trigger: AGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR-3UTR CAA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 3 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR GCA 72 bp TTCCACTCTCTTCAAAGAAGGGCCAAGAAAGGCTGGTaGCCAACAGGAAAGGGGAAGAAGGGGAGGGCCAAG +
Preference number: 3 (lower is better)
Translates to: FHSLQRRAKKGW*PTGKGKKGRAK
Trigger: CTTGGCCCTCCCCTTCTTCCCCTTTCCTGTTGGGCACCAGCCTTTCTTGGCCCTTCTTTGAAGAGAGTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp CCAGAATGGACGTTTCCAAGTCATCGACAAGGAATCTaGGGCCAACTGCCAGGGTCAGGAGCAGGAAATGCC +
Preference number: 3 (lower is better)
Translates to: PEWTFPSHRQGI*GQLPGSGAGNA
Trigger: GGCATTTCCTGCTCCTGACCCTGGCAGTTGGCCCCAGATTCCTTGTCGATGACTTGGAAACGTCCATTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp GAATGTGAAAGTGGTCTTCCCCTTCCTGGACCGTCATaGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTG +
Preference number: 3 (lower is better)
Translates to: ECESGLPLPGPS*CISASGERTAV
Trigger: CACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTTCACATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR TCA 72 bp AAACCCAAAGGTAATTGCAGGACGGGGCTGCCAAAATaGGCCGCAATTCCTCAAAGACCTGCCCAGGCTCTT +
Preference number: 3 (lower is better)
Translates to: KPKGNCRTGLPK*AAIPQRPAQAL
Trigger: AAGAGCCTGGGCAGGTCTTTGAGGAATTGCGGCTCATTTTGGCAGCCCCGTCCTGCAATTACCTTTGGGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp AATCTGGGGCCAACTGCCAGGGTCAGGAGCAGGAAATaGCATTTGTTCAGAACAAATGATGGACCAGCAGCC +
Preference number: 3 (lower is better)
Translates to: NLGPTARVRSRK*HLFRTNDGPAA
Trigger: GGCTGCTGGTCCATCATTTGTTCTGAACAAATGGCATTTCCTGCTCCTGACCCTGGCAGTTGGCCCCAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp ACAGCTCAGCAGAGTGGGAACTCTTCCCCATCCCCCTaGCCAATACCAGAAATCACTGATCACATGGAAGCA +
Preference number: 3 (lower is better)
Translates to: TAQQSGNSSPSP*PIPEITDHMEA
Trigger: TGCTTCCATGTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTGCTGAGCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp GGAAATGGACACAACCCTACGTATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGGCAGACACTGTGCTCT +
Preference number: 3 (lower is better)
Translates to: GNGHNPTYKETP*QTPWPGQTLCS
Trigger: AGAGCACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATACGTAGGGTTGTGTCCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
3UTR GCA 72 bp AGTATGCTATTCTCAGGTAGGGCCTATCCCCACTCCTaGCCAACATCACGCAATTTGGGACTGGGTCTGTTT +
Preference number: 3 (lower is better)
Translates to: SMLFSGRAYPHS*PTSRNLGLGLF
Trigger: AAACAGACCCAGTCCCAAATTGCGTGATGTTGGGCAGGAGTGGGGATAGGCCCTACCTGAGAATAGCATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp GAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTaGCAGGAAAAGATAAAGGACCACAGAGAGTTAGAG +
Preference number: 3 (lower is better)
Translates to: EYIPPALPSAPD*QEKIKDHRELE
Trigger: CTCTAACTCTCTGTGGTCCTTTATCTTTTCCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp ATTCTTTCAAACCCAAAGGTAATTGCAGGACGGGGCTaGCAAAATGAGCCGCAATTCCTCAAAGACCTGCCC +
Preference number: 3 (lower is better)
Translates to: ILSNPKVIAGRG*QNEPQFLKDLP
Trigger: GGGCAGGTCTTTGAGGAATTGCGGCTCATTTTGGCAGCCCCGTCCTGCAATTACCTTTGGGTTTGAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp GGCCAAAGACAATCACCAAGGTGTCTATCTGGTCCCTaGCGCCATCAACTCAATCAAACTCTTCGGATTAGC +
Preference number: 3 (lower is better)
Translates to: GQRQSPRCLSGP*RHQLNQTLRIS
Trigger: GCTAATCCGAAGAGTTTGATTGAGTTGATGGCGGCAGGGACCAGATAGACACCTTGGTGATTGTCTTTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp GAGGCCAGGTGTGCACAATCATTTTGCTCATTGGTCTaGAAATTCCCTAAGATTGGTCGTCCTCTGACACCC +
Preference number: 3 (lower is better)
Translates to: EARCAQSFCSLV*KFPKIGRPLTP
Trigger: GGGTGTCAGAGGACGACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAATGATTGTGCACACCTGGCCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CAA 90 bp CCTACATGGACAAAGGGGAGGGTGCACAGGACTTTAATTCCATCCTCCTCTGGCCAATCATTTTGCTCATaGGTCTGGAAATTCCCTAAG +
Preference number: 3 (lower is better)
Translates to: PTWTKGRVHRTLIPSSSGQSFCS*VWKFPK
Trigger: CTTAGGGAATTTCCAGACCAATGAGCAAAATGATTG...GCCAGAGGAGGATGGAATTAAAGTCCTGTGCACCCTCCCCTTTGTCCATGTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CAA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGAACCTTGTGTGGGATTaGGTCCAGGGTAGTATGAAA +
Preference number: 3 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGNLVWD*VQGSMK
Trigger: TTTCATACTACCCTGGACCAAATCCCACACAAGGTT...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp CCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTaGGGCCAGGTGTGCACAATCATTTTGCTCATTGGT +
Preference number: 3 (lower is better)
Translates to: PNSHTDLRRKGD*GQVCTIILLIG
Trigger: ACCAATGAGCAAAATGATTGTGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp TTTCTCAAAGGAGGAGATAAGATCCAGATAGAGCTGTaGCAACAGGCATTTGGGCAAAAGCAGGTGTCTCCC +
Preference number: 3 (lower is better)
Translates to: FLKGGDKIQIEL*QQAFGQKQVSP
Trigger: GGGAGACACCTGCTTTTGCCCAAATGCCTGTTGTCACAGCTCTATCTGGATCTTATCTCCTCCTTTGAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp ACAGACTTTCACCACCCCCGTTACACCCAGGACCTGTaGCTTAACAGCAAGATTTCCACCTTAGAAATGGTT +
Preference number: 3 (lower is better)
Translates to: TDFHHPRYTQDL*LNSKISTLEMV
Trigger: AACCATTTCTAAGGTGGAAATCTTGCTGTTAAGTCACAGGTCCTGGGTGTAACGGGGGTGGTGAAAGTCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp TCACCTGCTTTCACCCAATTGGTGGAACTGACTGTATaGAAACAACCAAAATACAGACTTTCACCACCCCCG +
Preference number: 3 (lower is better)
Translates to: SPAFTQLVELTV*KQPKYRLSPPP
Trigger: CGGGGGTGGTGAAAGTCTGTATTTTGGTTGTTTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp TTCTTATGGCCAAAGACAATCACCAAGGTGTCTATCTaGTCCCTGCCGCCATCAACTCAATCAAACTCTTCG +
Preference number: 3 (lower is better)
Translates to: FLWPKTITKVSI*SLPPSTQSNSS
Trigger: CGAAGAGTTTGATTGAGTTGATGGCGGCAGGGACCAGATAGACACCTTGGTGATTGTCTTTGGCCATAAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp AGCCATGAATTACAGACTGCATTCAGTCCATCAGCATaGCTTACGTTGCATGGAGGAAACAACCCGTATTAC +
Preference number: 3 (lower is better)
Translates to: SHELQTAFSPSA*LTLHGGNNPYY
Trigger: GTAATACGGGTTGTTTCCTCCATGCAACGTAAGCCATGCTGATGGACTGAATGCAGTCTGTAATTCATGGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp GTCTCTAGATCTGGTGTAGACTATCAACGTGTTCTTTaGAACTCAAAGCTCAGGGCCACGAATACATTCCAC +
Preference number: 3 (lower is better)
Translates to: VSRSGVDYQRVL*NSKLRATNTFH
Trigger: GTGGAATGTATTCGTGGCCCTGAGCTTTGAGTTTCAAAGAACACGTTGATAGTCTACACCAGATCTAGAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp TGTTCAGAACAAATGATGGACCAGCAGCCTTCCCTATaGCCGTGTCTAAACCATGTTTACAGTATGAAGGTG +
Preference number: 3 (lower is better)
Translates to: CSEQMMDQQPSL*PCLNHVYSMKV
Trigger: CACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGCTGCTGGTCCATCATTTGTTCTGAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CAA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATCCAACATCACGCAATTaGGGACTGGGTCTGTTTCAG +
Preference number: 3 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHPTSRN*GLGLFQ
Trigger: CTGAAACAGACCCAGTCCCAAATTGCGTGATGTTGG...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp AAAATTCAGTCCACCCTGCAGCAAAAAGATTTCACCTaGTTTCACCCAATTGGTGGAACTGACTGTATGGAA +
Preference number: 3 (lower is better)
Translates to: KIQSTLQQKDFT*FHPIGGTDCME
Trigger: TTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGAAATCTTTTTGCTGCAGGGTGGACTGAATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp GTGATTTTGATGGCTGTTACCCAGACATTATTTCTATaGCGGAAGGGGCACATTAAGTACATCAGCATTAGG +
Preference number: 3 (lower is better)
Translates to: VILMAVTQTLFL*RKGHIKYISIR
Trigger: CCTAATGCTGATGTACTTAATGTGCCCCTTCCGGCATAGAAATAATGTCTGGGTAACAGCCATCAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp AACAAGCTTAAGGCTCTGTTCACAAACTCCATCAACTaGCACACAGTGAGAATTTACGGGGAGATCTTAAAC +
Preference number: 3 (lower is better)
Translates to: NKLKALFTNSIN*HTVRIYGEILN
Trigger: GTTTAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAGAGCCTTAAGCTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR TCA 72 bp GACAAACCTAAGGAACTAGTATTCTATTATTACAGCTaGGAACCGTTTTACACAGAGGTGCAGCGCTATTCC +
Preference number: 3 (lower is better)
Translates to: DKPKELVFYYYS*EPFYTEVQRYS
Trigger: GGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAATAATAGAATACTAGTTCCTTAGGTTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp TCTATTATTACAGCTGAGAACCGTTTTACACAGAGGTaGAGCGCTATTCCTTTTGTCCACAGAAATCCTTCT +
Preference number: 3 (lower is better)
Translates to: SIITAENRFTQR*SAIPFVHRNPS
Trigger: AGAAGGATTTCTGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAATAATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR GCA 72 bp AACCAGAGGTCTGGTATTTTCCATCCCAAATCTATTTaGTGTAAGTTACCTGGAATTCGCCTACACATGATC +
Preference number: 3 (lower is better)
Translates to: NQRSGIFHPKSI*CKLPGIRLHMI
Trigger: GATCATGTGTAGGCGAATTCCAGGTAACTTACAGCAAATAGATTTGGGATGGAAAATACCAGACCTCTGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CCA 72 bp GACTGCATTCAGTCCATCAGCATGGCTTACGTTGCATaGAGGAAACAACCCGTATTACCCTTTTTAAATTTT +
Preference number: 3 (lower is better)
Translates to: DCIQSISMAYVA*RKQPVLPFLNF
Trigger: AAAATTTAAAAAGGGTAATACGGGTTGTTTCCTCCATGCAACGTAAGCCATGCTGATGGACTGAATGCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR-3UTR CAA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTAAGAGATACAGTTGCATaGTTCAAAGTCTACTGTGAT +
Preference number: 3 (lower is better)
Translates to: LFTNSINCHTVRIYGEILRDTVA*FKVYCD
Trigger: ATCACAGTAGACTTTGAACAATGCAACTGTATCTCT...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGAGCAGCCAGCAGGCGTaGGGCGGATGGTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQSSQQA*GGWWRR
Trigger: CCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCT...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGCCGGTGTGCGCGTCTaGTCGCTCGCGCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLAGVRV*SLAPSV
Trigger: CACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGC...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCGCCGGTGTGCGCGTCTaGTCGCTCGCGCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCAGVRV*SLAPSV
Trigger: CACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGC...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGCCGGTGTGCGCGTCTaGTCGCTCGCGCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARAGVRV*SLAPSV
Trigger: CACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGC...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGCGACACCAGCCCCCTaGTGCAGGCCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRATPAP*CRPPGR
Trigger: CCGCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGC...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGCGACACCAGCCCCCTaGTGCAGGCCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDATPAP*CRPPGR
Trigger: CCGCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTAGCAGCCAGCAGGCGTaGGGCGGATGGTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLSSQQA*GGWWRR
Trigger: CCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCT...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCTTGGCTCGCCGGTGTaGGCGTCTGCTCGCTCGCGC +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWLGSPV*ASARSR
Trigger: GCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGGTCCCCAGAAGCCATaGCAGGCTGCGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQGPQKP*QAAELG
Trigger: GCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACC...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGGGAAAGGACAGCGGTaGTTGGCGGAGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQGKGQR*LAEPWE
Trigger: TTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCC...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTCCAGGCTGCGGAACTTaGCTCGCCGGTGTGCGCGTC +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLPGCGT*LAGVRV
Trigger: GACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGG...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGGAAGGGCAGGGAGGTaGGGGAGGCCAAGTATGCTG +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQGRAGR*GRPSML
Trigger: CAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCC...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCAGCAGCCAGCAGGCGTaGGGCGGATGGTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGSSQQA*GGWWRR
Trigger: CCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCT...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGCCGGTGTGCGCGTCTaGTCGCTCGCGCCCTCCGTG +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSAGVRV*SLAPSV
Trigger: CACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGC...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAGCTGTCGTCTGTGGCTaGGTTGCAGAGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEAVVCG*VAERSP
Trigger: CGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGC...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGGCGACACCAGCCCCCTaGTGCAGGCCTCCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQATPAP*CRPPGR
Trigger: CCGCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGC...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGTGGGCCAGAAGACCTaGGACACCAGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLVGQKT*DTSPLL
Trigger: CAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCAC...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCGTGGGCCAGAAGACCTaGGACACCAGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPVGQKT*DTSPLL
Trigger: CAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCAC...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGACAGGCTTGGGGGCTaGCTATGCGCAGAATCAGAG +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPDRLGG*LCAESE
Trigger: CTCTGATTCTGCGCATAGGCAGCCCCCAAGCCTGTC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCCAGGCTGCGGAACTTaGCTCGCCGGTGTGCGCGTC +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWPGCGT*LAGVRV
Trigger: GACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATCCAGGCTGCGGAACTTaGCTCGCCGGTGTGCGCGTC +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDPGCGT*LAGVRV
Trigger: GACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGG...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCCTGCTGCAGGCCTCCTaGGCGGTGAGCTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGLLQAS*AVSFRP
Trigger: TGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAG...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATCTGCTGCAGGCCTCCTaGGCGGTGAGCTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDLLQAS*AVSFRP
Trigger: TGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAG...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCTGCTGCAGGCCTCCTaGGCGGTGAGCTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGLLQAS*AVSFRP
Trigger: TGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCTGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPCLAEP*EDTALD
Trigger: GTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCA...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCTCCGCCAGTGTAGCGTaGTTCACGTCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPSASVA*FTSHSP
Trigger: GGGTGAATGTGACGTGAATCACGCTACACTGGCGGA...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGGCCTCCTGGGCGGTaGGCTTCCGCCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRRPPGR*ASAHRT
Trigger: TGTTCTGTGGGCGGAAGCTCACCGCCCAGGAGGCCT...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGTCCCCAGAAGCCATaGCAGGCTGCGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLGPQKP*QAAELG
Trigger: GCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACC...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCGTCTGTGGCTGCGTTaGAGAGCGCTCGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPRLWLR*RALAGL
Trigger: AAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGTGGGCCAGAAGACCTaGGACACCAGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARVGQKT*DTSPLL
Trigger: CAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCAC...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCCCGGGGCAGACACTGTaGTCTGGTTTCCGAAACACA +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPPGQTL*SGFRNT
Trigger: TGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCGG...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAGGGAAAGGACAGCGGTaGTTGGCGGAGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEGKGQR*LAEPWE
Trigger: TTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCC...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CAGAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTGATCACGCGCGGGGTCCGGTGTaGGCGTGTGTGTGCGCGCGT +
Preference number: 4 (lower is better)
Translates to: QSGNSSPSPWPIPEITDHARGPV*ACVCAR
Trigger: ACGCGCGCACACACACGCGCACACCGGACCCCGCGC...GTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCAAGACACCGTCTTGGTaGCCCTGTCACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPKTPSW*PCHLLK
Trigger: CTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTT...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCGCAGCATGACCTCCTaGCTGAACGTGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPRSMTS*LNVVGQ
Trigger: CTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGGGAGTCAAGGCCTTTaGAGGAGCTCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQGSQGL*RSSRAA
Trigger: AGCAGCTCTGGAGCTCCTCCAAAGGCCTTGACTCCC...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGAAGGACAGCGGTGCTTaGCGGAGCCCTGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQKDSGA*RSPGKI
Trigger: TATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTT...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTAGGCCTCCTGGGCGGTaGGCTTCCGCCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGARPPGR*ASAHRT
Trigger: TGTTCTGTGGGCGGAAGCTCACCGCCCAGGAGGCCT...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGCACGTCTTCCAGCACTaGTTTCAGGAAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQHVFQH*FQEAPH
Trigger: GTGCGGAGCTTCCTGAAATCAGTGCTGGAAGACGTG...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGAAGCCATGCCAGGCTaGGGAACTTGGCTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWREAMPG*GTWLAG
Trigger: ACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTC...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAAGCCATGCCAGGCTaGGGAACTTGGCTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGAREAMPG*GTWLAG
Trigger: ACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTC...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGTCCCCAGAAGCCATaGCAGGCTGCGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGGPQKP*QAAELG
Trigger: GCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACC...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCCTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPLFTGL*RFNPPL
Trigger: CAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAG...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCCTGGACAGCAGGATGTaGGTGAACCCTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPLDSRM*VNPSSF
Trigger: GAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAG...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCGTCTGTGGCTGCGTTaGAGAGCGCTCGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGRLWLR*RALAGL
Trigger: AAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCGTCTGTGGCTGCGTTaGAGAGCGCTCGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWRLWLR*RALAGL
Trigger: AAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGAATAATCCAGGCCGCTaGAGAACACGCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQNNPGR*RTRSPL
Trigger: CAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATT...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTGTGGGCCAGAAGACCTaGGACACCAGCCCCCTGCTG +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAVGQKT*DTSPLL
Trigger: CAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCAC...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGGAAAGGACAGCGGTaGTTGGCGGAGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGGKGQR*LAEPWE
Trigger: TTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCC...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCCAGGCTGCGGAACTTaGCTCGCCGGTGTGCGCGTC +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSPGCGT*LAGVRV
Trigger: GACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCGCAGCATGACCTCCTaGCTGAACGTGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWRSMTS*LNVVGQ
Trigger: CTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGCAGACACTGTGCTCTaGTTTCCGAAACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPADTVL*FPKHRA
Trigger: TGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCCCTTGGACAGCTCTCTaGCCAGGAAGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCPWTAL*PGRAGR
Trigger: CCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGG...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGTGCATTTCAGCAAGTaGGGAAAGGACAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPVHFSK*GKDSGA
Trigger: AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCAC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGCATCGACAAGGAATCTaGGGCCAACTGCCAGGGTCA +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQHRQGI*GQLPGS
Trigger: TGACCCTGGCAGTTGGCCCCAGATTCCTTGTCGATG...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCACTGCTTCCCTGACTTaGTCCTCTTGTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPTASLT*SSCPWT
Trigger: TGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGT...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGTTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQLLSEV*LDSRMC
Trigger: GCACATCCTGCTGTCCAGTCAGACCTCGGATAACAA...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAAGCAGCCAGCAGGCGTaGGGCGGATGGTGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTSSQQA*GGWWRR
Trigger: CCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCT...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGAGGCCTCCTGGGCGGTaGGCTTCCGCCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQRPPGR*ASAHRT
Trigger: TGTTCTGTGGGCGGAAGCTCACCGCCCAGGAGGCCT...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATCCCACGTGTCCTCGGTaGTCCCGTAGCCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDPTCPR*SRSLSI
Trigger: GATGGAAAGGCTACGGGAGCACCGAGGACACGTGGG...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGCTGTCGTCTGTGGCTaGGTTGCAGAGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSAVVCG*VAERSP
Trigger: CGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGC...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGGCTGTCGTCTGTGGCTaGGTTGCAGAGCGCTCGCCG +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQAVVCG*VAERSP
Trigger: CGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGC...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCTTCTGCAATCCGAGTaGTCTCCTTTCGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPLLQSE*SPFAGR
Trigger: GCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGGGGGAGGCCAAGTATaGTGCGTTTTCCATCCATTA +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPGGGQV*CVFHPL
Trigger: TAATGGATGGAAAACGCAGCATACTTGGCCTCCCCC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCACATTCCACCTGCCCTaGCCAGTGCACCTGATTGCC +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPTFHLP*PVHLIA
Trigger: GGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGT...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCGGTTCAATCCCCCGTTaGTCAGAGCAGAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPGSIPR*SEQSHR
Trigger: TCGGTGGCTCTGCTCTGACCAACGGGGGATTGAACC...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS-3UTR CCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGTTTGCTGTCGTCTGTaGCTGCGTTGCAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLVCCRL*LRCRAL
Trigger: GAGCGCTCTGCAACGCAGCCACAGACGACAGCAAAC...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCGTTTGCTGTCGTCTGTaGCTGCGTTGCAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPVCCRL*LRCRAL
Trigger: GAGCGCTCTGCAACGCAGCCACAGACGACAGCAAAC...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGGCATGAACCTTGTGTaGGATTTGGTCCAGGGTAGT +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPGMNLV*DLVQGS
Trigger: ACTACCCTGGACCAAATCCCACACAAGGTTCATGCC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTCCGCCAGTGTAGCGTaGTTCACGTCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPSASVA*FTSHSP
Trigger: GGGTGAATGTGACGTGAATCACGCTACACTGGCGGA...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGCTCCCCACTGCGCTaGGGAGCAGCAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQRSPLR*GAAVCC
Trigger: ACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCG...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCGCTCCCCACTGCGCTaGGGAGCAGCAGTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSRSPLR*GAAVCC
Trigger: ACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAAGGCCTCCTGGGCGGTaGGCTTCCGCCCACAGAACA +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTRPPGR*ASAHRT
Trigger: TGTTCTGTGGGCGGAAGCTCACCGCCCAGGAGGCCT...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCCGTCGGAAAGGAGACTaGGGCCAGGTGTGCACAATC +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCRRKGD*GQVCTI
Trigger: GATTGTGCACACCTGGCCTCAGTCTCCTTTCCGACG...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGCCTGCCCAGTGCACCTaGTTGCCAGGAAAAGATAAA +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQPAQCT*LPGKDK
Trigger: TTTATCTTTTCCTGGCAATCAGGTGCACTGGGCAGG...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTCCCACGTGTCCTCGGTaGTCCCGTAGCCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAPTCPR*SRSLSI
Trigger: GATGGAAAGGCTACGGGAGCACCGAGGACACGTGGG...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAATGTCACGCAGCAGCTTaGAGGTACTGGACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQECHAAA*RYWTAS
Trigger: GGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACA...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCCAGTTGCTTTCATTCTaGCGGACACTGTATCTGAGC +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPQLLSF*RTLYLS
Trigger: GCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTG...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATCCTTTCGCCGGTCGCTaGACAACCGGCCAATTAGGT +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDPFAGR*TTGQLG
Trigger: ACCTAATTGGCCGGTTGTCCAGCGACCGGCGAAAGG...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCCTTTCGCCGGTCGCTaGACAACCGGCCAATTAGGT +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGPFAGR*TTGQLG
Trigger: ACCTAATTGGCCGGTTGTCCAGCGACCGGCGAAAGG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCCTTTCGCCGGTCGCTaGACAACCGGCCAATTAGGT +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWPFAGR*TTGQLG
Trigger: ACCTAATTGGCCGGTTGTCCAGCGACCGGCGAAAGG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACTGCTGCAGGCCTCCTaGGCGGTGAGCTTCCGCCCA +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKLLQAS*AVSFRP
Trigger: TGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGGAGTCAAGGCCTTTaGAGGAGCTCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGGSQGL*RSSRAA
Trigger: AGCAGCTCTGGAGCTCCTCCAAAGGCCTTGACTCCC...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGGGAGTCAAGGCCTTTaGAGGAGCTCCAGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDGSQGL*RSSRAA
Trigger: AGCAGCTCTGGAGCTCCTCCAAAGGCCTTGACTCCC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGTGGGGGCCCGTGAGCTaGGGCCCCTCAGACTTCATA +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQWGPVS*GPSDFI
Trigger: TATGAAGTCTGAGGGGCCCCAGCTCACGGGCCCCCA...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCCTTGGACAGCTCTCTaGCCAGGAAGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSPWTAL*PGRAGR
Trigger: CCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCAAGGACAGCGGTGCTTaGCGGAGCCCTGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCKDSGA*RSPGKI
Trigger: TATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTT...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGACAGCTCAGCAGAGTaGGAACTCTTCCCCATCCCC +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRDSSAE*ELFPIP
Trigger: GGGGATGGGGAAGAGTTCCCACTCTGCTGAGCTGTC...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTTCCGCCAGTGTAGCGTaGTTCACGTCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARSASVA*FTSHSP
Trigger: GGGTGAATGTGACGTGAATCACGCTACACTGGCGGA...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPLLSEV*LDSRMC
Trigger: GCACATCCTGCTGTCCAGTCAGACCTCGGATAACAA...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGCCGGACTTCTTTCATaGTCTCAGGTGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLAGLLS*SQVSGH
Trigger: ATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGC...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTCACGTCTTCCAGCACTaGTTTCAGGAAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARHVFQH*FQEAPH
Trigger: GTGCGGAGCTTCCTGAAATCAGTGCTGGAAGACGTG...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCACGTCTTCCAGCACTaGTTTCAGGAAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGHVFQH*FQEAPH
Trigger: GTGCGGAGCTTCCTGAAATCAGTGCTGGAAGACGTG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGTCTCTCAGGGAGTGCTaGCCTTACCCAGAATGGACG +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRSLREC*PYPEWT
Trigger: CGTCCATTCTGGGTAAGGTCAGCACTCCCTGAGAGA...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGAAGCCATGCCAGGCTaGGGAACTTGGCTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSEAMPG*GTWLAG
Trigger: ACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGGTCCCCAGAAGCCATaGCAGGCTGCGGAACTTGGC +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSGPQKP*QAAELG
Trigger: GCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCATAAACTCCTCACAGTaGAAGAGGTGGTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPINSSQ*KRWCSG
Trigger: GCCGGAGCACCACCTCTTGCACTGTGAGGAGTTTAT...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAACTGGACAGCAGGATGTaGGTGAACCCTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQELDSRM*VNPSSF
Trigger: GAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAG...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCAATAATCCAGGCCGCTaGAGAACACGCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGNNPGR*RTRSPL
Trigger: CAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATT...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCGAGGAGCTCCAGAGCTaGTTGAGCATGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCEELQS*LSMRHS
Trigger: GGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTC...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGAGGAGCTCCAGAGCTaGTTGAGCATGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDEELQS*LSMRHS
Trigger: GGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTACATGGACAAAGGGGAGGGTGCACAGGACTTTAATTCCATCCTCCTCTGGCGGGAAAGGACAGCGGTaGTTGGCGGAGCCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PTWTKGRVHRTLIPSSSGGKGQR*LAEPWE
Trigger: TTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCC...GCCAGAGGAGGATGGAATTAAAGTCCTGTGCACCCTCCCCTTTGTCCATGTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCCTGGACCGTCATGGTaGATTTCAGCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPPGPSW*ISASGE
Trigger: TTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTCCTGGACCGTCATGGTaGATTTCAGCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLPGPSW*ISASGE
Trigger: TTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCACTTGGGGGCTGCCTATaGGCAGAATCAGAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: ALIVTQICVGKETEARCALGGCL*AESERA
Trigger: CGCCCGCTCTGATTCTGCGCATAGGCAGCCCCCAAG...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGGTTCATTGCTAGAATaGACCAAACGGCATGAACCT +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPGSLLE*TKRHEP
Trigger: AGGTTCATGCCGTTTGGTGCATTCTAGCAATGAACC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTAAGACACCGTCTTGGTaGCCCTGTCACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARKTPSW*PCHLLK
Trigger: CTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCAAGACACCGTCTTGGTaGCCCTGTCACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGKTPSW*PCHLLK
Trigger: CTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTT...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGTGTAAGACACCGTCTTaGTGGCCCTGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWCKTPS*WPCHLL
Trigger: CAGGAGGTGACAGGGCCACCAAGACGGTGTCTTACA...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATTGTAAGACACCGTCTTaGTGGCCCTGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDCKTPS*WPCHLL
Trigger: CAGGAGGTGACAGGGCCACCAAGACGGTGTCTTACA...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACGTTTGCTGTCGTCTGTaGCTGCGTTGCAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYVCCRL*LRCRAL
Trigger: GAGCGCTCTGCAACGCAGCCACAGACGACAGCAAAC...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACATGGGGGCCCGTGAGCTaGGGCCCCTCAGACTTCATA +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTWGPVS*GPSDFI
Trigger: TATGAAGTCTGAGGGGCCCCAGCTCACGGGCCCCCA...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCTGGGGGCCCGTGAGCTaGGGCCCCTCAGACTTCATA +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSWGPVS*GPSDFI
Trigger: TATGAAGTCTGAGGGGCCCCAGCTCACGGGCCCCCA...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGGAAGGGCAGGGAGGTaGGGGAGGCCAAGTATGCTG +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSGRAGR*GRPSML
Trigger: CAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGACLAEP*EDTALD
Trigger: GTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCA...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAAGGACAGCGGTGCTTaGCGGAGCCCTGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYKDSGA*RSPGKI
Trigger: TATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTT...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAGTGCATTTCAGCAAGTaGGGAAAGGACAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEVHFSK*GKDSGA
Trigger: AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCAC...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAATGGTCTTCCCCTTCCTaGACCGTCATGGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEWSSPS*TVMVHF
Trigger: GAAATGCACCATGACGGTCCAGGAAGGGGAAGACCA...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGGGTTCAATCCCCCGTTaGTCAGAGCAGAGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQGSIPR*SEQSRA
Trigger: GGCTCGGCTCTGCTCTGACCAACGGGGGATTGAACC...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAGCTCTTTCCAGGATCTaGAGGTCTGTGGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEALSRI*RSVGQF
Trigger: AAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGC...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAGGCGGACACTGTATCTaGGCCTTTTGTCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEGGHCI*AFCQRR
Trigger: ACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCC...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGTTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGLLSEV*LDSRMC
Trigger: GCACATCCTGCTGTCCAGTCAGACCTCGGATAACAA...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCGCCGGACTTCTTTCATaGTCTCAGGTGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCAGLLS*SQVSGH
Trigger: ATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGC...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCCCTTCACAAAGTCCCTaGTGGCTTCTGCAATCCGAG +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGPSQSP*WLLQSE
Trigger: CTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGG...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATCCTTCACAAAGTCCCTaGTGGCTTCTGCAATCCGAG +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDPSQSP*WLLQSE
Trigger: CTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGG...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCCTTCACAAAGTCCCTaGTGGCTTCTGCAATCCGAG +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGPSQSP*WLLQSE
Trigger: CTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTTGTCCTGCAGGTAGCTaGAAAGGGAGTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARCPAGS*KGSQGL
Trigger: AAGGCCTTGACTCCCTTTTCAGCTACCTGCAGGACA...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATTGTCCTGCAGGTAGCTaGAAAGGGAGTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDCPAGS*KGSQGL
Trigger: AAGGCCTTGACTCCCTTTTCAGCTACCTGCAGGACA...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPYKETP*QTPWPG
Trigger: CCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATA...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CTCAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTGCCAGGTATAAAGAGACACCTTaGCAAACTCCTTGGCCGGGG +
Preference number: 4 (lower is better)
Translates to: LRATNTFHLPCPVHLIARYKETP*QTPWPG
Trigger: CCCCGGCCAAGGAGTTTGTCAAGGTGTCTCTTTATA...CCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGTGTGTTTTTGCAGAATaGCAGGCTTGGGGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGCVFAE*QAWGLP
Trigger: AGGCAGCCCCCAAGCCTGTCATTCTGCAAAAACACA...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGACGGGGCTGCCAAAATaGGCCGCAATTCCTCAAAGA +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGTGLPK*AAIPQR
Trigger: TCTTTGAGGAATTGCGGCTCATTTTGGCAGCCCCGT...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGTCATTGATAAGACACTaGGGACACATGGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQSLIRH*GHMGML
Trigger: CAGCATTCCCATGTGTCCTCAGTGTCTTATCAATGA...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCCCCACGTGTCCTCGGTaGTCCCGTAGCCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSPTCPR*SRSLSI
Trigger: GATGGAAAGGCTACGGGAGCACCGAGGACACGTGGG...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGATAAACTCCTCACAGTaGAAGAGGTGGTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGINSSQ*KRWCSG
Trigger: GCCGGAGCACCACCTCTTGCACTGTGAGGAGTTTAT...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTCTCGAAACCGACAGTTaGTTTCATTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLLETDS*FHSGGH
Trigger: GTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAG...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCTGGACAGCAGGATGTaGGTGAACCCTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWLDSRM*VNPSSF
Trigger: GAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTACCCAGAATGGACGTTTCCAAGTCATCGACAAGGAATCTGGGGCCAACTGCGTCTGTGGCTGCGTTaGAGAGCGCTCGCCGGACTT +
Preference number: 4 (lower is better)
Translates to: PYPEWTFPSHRQGIWGQLRLWLR*RALAGL
Trigger: AAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACG...CAGTTGGCCCCAGATTCCTTGTCGATGACTTGGAAACGTCCATTCTGGGTAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTAATAATCCAGGCCGCTaGAGAACACGCTCCCCACTG +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGANNPGR*RTRSPL
Trigger: CAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATT...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGTCCCTGATGGCTTCTaGAATCCGAGTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDVPDGF*NPSALL
Trigger: AAGGAGAGCACTCGGATTGCAGAAGCCATCAGGGAC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTATTGCAGGACGGGGCTaGCAAAATGAGCCGCAATTC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARIAGRG*QNEPQF
Trigger: GAATTGCGGCTCATTTTGGCAGCCCCGTCCTGCAAT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CTCAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTGCCAGGGAAGGAGAGTTCCACTaGATGGCTAACAGGATGGGA +
Preference number: 4 (lower is better)
Translates to: LRATNTFHLPCPVHLIAREGEFH*MANRMG
Trigger: TCCCATCCTGTTAGCCATGCAGTGGAACTCTCCTTC...CCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGTAAGACACCGTCTTaGTGGCCCTGTCACCTCCTG +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGACKTPS*WPCHLL
Trigger: CAGGAGGTGACAGGGCCACCAAGACGGTGTCTTACA...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CTCAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTGCCAGGCAGCTTCCTCTTCACTaGACTGTGCAGGTTCAATCC +
Preference number: 4 (lower is better)
Translates to: LRATNTFHLPCPVHLIARQLPLH*TVQVQS
Trigger: GGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTG...CCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCAGACACTGTGCTCTaGTTTCCGAAACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWADTVL*FPKHRA
Trigger: TGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGC...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACCTTGGACAGCTCTCTaGCCAGGAAGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKPWTAL*PGRAGR
Trigger: CCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGAAAGGACAGCGGTGCTTaGCGGAGCCCTGGGAAGATA +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGKDSGA*RSPGKI
Trigger: TATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTT...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGCTTCCTGGACCGTCATaGTGCATTTCAGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWLPGPS*CISASG
Trigger: CCCACTTGCTGAAATGCACCATGACGGTCCAGGAAG...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTTGGTCTTCCCCTTCCTaGACCGTCATGGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARWSSPS*TVMVHF
Trigger: GAAATGCACCATGACGGTCCAGGAAGGGGAAGACCA...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTACAGAGAGGGGGCCCTaGGGTGGAAGATCAAAAATG +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARTERGP*GGRSKM
Trigger: CATTTTTGATCTTCCACCCCAGGGCCCCCTCTCTGT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTGCTTCCCTGACTTaGTCCTCTTGTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDTASLT*SSCPWT
Trigger: TGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGT...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTGGACTGCTTCCCTaGCTTGATCCTCTTGTCCTT +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDTGLLP*LDPLVL
Trigger: AAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGT...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGCTCTTTCCAGGATCTaGAGGTCTGTGGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDALSRI*RSVGQF
Trigger: AAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCAAATCCAAGCCAGGCTaGTGGGACCCATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCKSKPG*WDPFPK
Trigger: CTTTGGAAATGGGTCCCATCAGCCTGGCTTGGATTT...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGTCTTGCTCTCCAACATaGTCATTCAAATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQSCSPT*SFKSKP
Trigger: TGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGA...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCGGACACTGTATCTaGGCCTTTTGTCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGGGHCI*AFCQRR
Trigger: ACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCC...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGC +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYLLSEV*LDSRMC
Trigger: GCACATCCTGCTGTCCAGTCAGACCTCGGATAACAA...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCACGTCTTCCAGCACTaGTTTCAGGAAGCTCCGCAC +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSHVFQH*FQEAPH
Trigger: GTGCGGAGCTTCCTGAAATCAGTGCTGGAAGACGTG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTATCCAGATAGAGCTGTaGCAACAGGCATTTGGGCAA +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLIQIEL*QQAFGQ
Trigger: TTGCCCAAATGCCTGTTGTCACAGCTCTATCTGGAT...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGAGTCCAAGGAGAATCCTaGCCCCACTTCAACCGATGC +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGVQGES*PHFNRC
Trigger: GCATCGGTTGAAGTGGGGTCAGGATTCTCCTTGGAC...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCATTAGAATGGGTCAATaGAGAACAAAAGGAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GFRNTGQSWKLGARELGPIRMGQ*RTKGGR
Trigger: TCTGCCTCCTTTTGTTCTTCATTGACCCATTCTAAT...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACCCACGTGTCCTCGGTaGTCCCGTAGCCTTTCCATC +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKPTCPR*SRSLSI
Trigger: GATGGAAAGGCTACGGGAGCACCGAGGACACGTGGG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACATAAACTCCTCACAGTaGAAGAGGTGGTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYINSSQ*KRWCSG
Trigger: GCCGGAGCACCACCTCTTGCACTGTGAGGAGTTTAT...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTTATGGGAGGTCCCCTTaGTCTTTCCAGGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARYGRSP*SFQDLK
Trigger: CTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATA...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATTATGGGAGGTCCCCTTaGTCTTTCCAGGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDYGRSP*SFQDLK
Trigger: CTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATA...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTCTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGALFTGL*RFNPPL
Trigger: CAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAG...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTCTCGAAACCGACAGTTaGTTTCATTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARLETDS*FHSGGH
Trigger: GTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAG...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCCTCGAAACCGACAGTTaGTTTCATTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCLETDS*FHSGGH
Trigger: GTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAG...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCCTTCTGCAATCCGAGTaGTCTCCTTTCGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSLLQSE*SPFAGR
Trigger: GCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAG...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCGGGGCAGACACTGTaGTCTGGTTTCCGAAACACA +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQPGQTL*SGFRNT
Trigger: TGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCGG...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGGGAGGCCAAGTATaGTGCGTTTTCCATCCATTA +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGGGGQV*CVFHPL
Trigger: TAATGGATGGAAAACGCAGCATACTTGGCCTCCCCC...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGGGAGGCCAAGTATaGTGCGTTTTCCATCCATTA +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWGGGQV*CVFHPL
Trigger: TAATGGATGGAAAACGCAGCATACTTGGCCTCCCCC...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGATCTGAAGGTCTGTaGGACAGTTTCTCAACCGAC +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGGSEGL*DSFSTD
Trigger: GTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCC...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCGGATCTGAAGGTCTGTaGGACAGTTTCTCAACCGAC +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCGSEGL*DSFSTD
Trigger: GTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCC...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCAAGACACCGTCTTGGTaGCCCTGTCACCTCCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSKTPSW*PCHLLK
Trigger: CTTCAGGAGGTGACAGGGCCACCAAGACGGTGTCTT...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAACAGTTGCTTTCATTCTaGCGGACACTGTATCTGAGC +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEQLLSF*RTLYLS
Trigger: GCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTG...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGTTTGCTGTCGTCTGTaGCTGCGTTGCAGAGCGCTC +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSVCCRL*LRCRAL
Trigger: GAGCGCTCTGCAACGCAGCCACAGACGACAGCAAAC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACACCTTTCGCCGGTCGCTaGACAACCGGCCAATTAGGT +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTPFAGR*TTGQLG
Trigger: ACCTAATTGGCCGGTTGTCCAGCGACCGGCGAAAGG...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAAACACAGGGCAGAGCTaGAAGTTGGGGGCCCGTGAG +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKNTGQS*KLGARE
Trigger: CTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTT...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGGAAGATACAGCCTTaGACAGCTCTCTGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSGKIQP*TALWPG
Trigger: TCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCC...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCATGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: ALIVTQICVGKETEARCACLAEP*EDTALD
Trigger: GTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCA...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCAATTCCATCCTCCTCTaGCTGAAGGAGAGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGNSILL*LKERFP
Trigger: GGGAAACCTCTCCTTCAGCCAGAGGAGGATGGAATT...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTGAGAGTTCCACTGCATaGCTAACAGGATGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAESSTA*LTGWEG
Trigger: TCCCTCCCATCCTGTTAGCCATGCAGTGGAACTCTC...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCTCCGCCAGTGTAGCGTaGTTCACGTCACATTCACCC +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSSASVA*FTSHSP
Trigger: GGGTGAATGTGACGTGAATCACGCTACACTGGCGGA...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACGGCGGACACTGTATCTaGGCCTTTTGTCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYGGHCI*AFCQRR
Trigger: ACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCC...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAACAGCAGGATGTGCGTaGACCCTTCTTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTTAGCA*TLLPSA
Trigger: TGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGT...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACCTTCACAAAGTCCCTaGTGGCTTCTGCAATCCGAG +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGPSQSP*WLLQSE
Trigger: CTCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGG...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTGTCCTGCAGGTAGCTaGAAAGGGAGTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSCPAGS*KGSQGL
Trigger: AAGGCCTTGACTCCCTTTTCAGCTACCTGCAGGACA...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTCAACTGCCACACAGTaGGAATTTACGGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCSTATQ*EFTGRS
Trigger: AGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGA...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTCAGCAGCCTTCCCTATaGCCGTGTCTAAACCATGTT +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAQQPSL*PCLNHV
Trigger: AACATGGTTTAGACACGGTCATAGGGAAGGCTGCTG...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTTGGAGGTACTGGACTaGTTCCCTGACTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYLEVLD*FPDLIL
Trigger: GAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAA...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTCAGGGGCATTATTTaGAAACCACTGGGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCFRGII*KPLGVV
Trigger: GACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAA...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGLFTGL*RFNPPL
Trigger: CAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAG...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTCTCGAAACCGACAGTTaGTTTCATTCTGGCGGACAC +
Preference number: 4 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGALETDS*FHSGGH
Trigger: GTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAG...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCAGAGGAGCTCCAGAGCTaGTTGAGCATGAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ALIVTQICVGKETEARCAEELQS*LSMRHS
Trigger: GGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTC...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCCCGGGGCAGACACTGTaGTCTGGTTTCCGAAACACA +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSPGQTL*SGFRNT
Trigger: TGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCGG...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGAGGCCAAGTATGCTaGGTTTTCCATCCATTACAC +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGGGQVC*VFHPLH
Trigger: GTGTAATGGATGGAAAACGCAGCATACTTGGCCTCC...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGGAGGCCAAGTATGCTaGGTTTTCCATCCATTACAC +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDGGQVC*VFHPLH
Trigger: GTGTAATGGATGGAAAACGCAGCATACTTGGCCTCC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCTGGACCGTCATGGTaGATTTCAGCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQPGPSW*ISASGE
Trigger: TTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTCGTTTTACACAGAGGTaGAGCGCTATTCCTTTTGTC +
Preference number: 4 (lower is better)
Translates to: ASGERTAVLGGALGRYSLRFTQR*SAIPFV
Trigger: GACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACG...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGTGCCCACTTCTTGCTaGCTTATTCCACTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDVPTSC*LIPLSS
Trigger: TGAAGAGAGTGGAATAAGGCAGCAAGAAGTGGGCAC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCCCCAGTGCACCTGATTaGCAGGAAAAGATAAAGGAC +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCPSAPD*QEKIKD
Trigger: GTCCTTTATCTTTTCCTGGCAATCAGGTGCACTGGG...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTAGAGGTGTCCTCAATTaGCCACCCACAGCTATTCTT +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARRGVLN*PPTAIL
Trigger: AAGAATAGCTGTGGGTGGGCAATTGAGGACACCTCT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACGGATCTGAAGGTCTGTaGGACAGTTTCTCAACCGAC +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYGSEGL*DSFSTD
Trigger: GTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCC...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGATTCGCTTCCGTTTATaGGAGGTCCCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWIRFRL*EVPLLF
Trigger: AAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAAT...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGTTCAATCCCCCGTTaGTCAGAGCAGAGCCACCGA +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKGSIPR*SEQSHR
Trigger: TCGGTGGCTCTGCTCTGACCAACGGGGGATTGAACC...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS-3UTR CCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTCAGTTGCTTTCATTCTaGCGGACACTGTATCTGAGC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARQLLSF*RTLYLS
Trigger: GCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTG...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACATCCGCACGAGGCATTTaGACTCCTCTAACACCACGG +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTSARGI*TPLTPR
Trigger: CCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGA...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGGCAGACACTGTGCTCTaGTTTCCGAAACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQADTVL*FPKHRA
Trigger: TGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGC...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAATGCTTGGCGGAGCCCTaGGAAGATACAGCCTTGGAC +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKCLAEP*EDTALD
Trigger: GTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCA...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCTTCCTGGACCGTCATaGTGCATTTCAGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSLPGPS*CISASG
Trigger: CCCACTTGCTGAAATGCACCATGACGGTCCAGGAAG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACTTCCTGGACCGTCATaGTGCATTTCAGCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGLPGPS*CISASG
Trigger: CCCACTTGCTGAAATGCACCATGACGGTCCAGGAAG...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTGGTCTTCCCCTTCCTaGACCGTCATGGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSWSSPS*TVMVHF
Trigger: GAAATGCACCATGACGGTCCAGGAAGGGGAAGACCA...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGACTGCTTCCCTGACTTaGTCCTCTTGTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQTASLT*SSCPWT
Trigger: TGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGT...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGAAATCCAAGCCAGGCTaGTGGGACCCATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQKSKPG*WDPFPK
Trigger: CTTTGGAAATGGGTCCCATCAGCCTGGCTTGGATTT...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCAAATCCAAGCCAGGCTaGTGGGACCCATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSKSKPG*WDPFPK
Trigger: CTTTGGAAATGGGTCCCATCAGCCTGGCTTGGATTT...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTCTTGCTCTCCAACATaGTCATTCAAATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPSCSPT*SFKSKP
Trigger: TGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGA...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAATCTTGCTCTCCAACATaGTCATTCAAATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQESCSPT*SFKSKP
Trigger: TGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGA...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGCCGGACTTCTTTCATaGTCTCAGGTGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSAGLLS*SQVSGH
Trigger: ATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACATGTCCTGCAGGTAGCTaGAAAGGGAGTCAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTCPAGS*KGSQGL
Trigger: AAGGCCTTGACTCCCTTTTCAGCTACCTGCAGGACA...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAAACCAGAGAGAGCCATaGTGGCCAAGTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTNQREP*WPSLQV
Trigger: GACTTGGAGACTTGGCCATCATGGCTCTCTCTGGTT...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGATTGGAGGTACTGGACTaGTTCCCTGACTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGLEVLD*FPDLIL
Trigger: GAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAA...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGTATGGGAGGTCCCCTTaGTCTTTCCAGGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQYGRSP*SFQDLK
Trigger: CTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATA...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACACTGGACAGCAGGATGTaGGTGAACCCTTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTLDSRM*VNPSSF
Trigger: GAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAG...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTACATGGACAAAGGGGAGGGTGCACAGGACTTTAATTCCATCCTCCTCTGGCGTCCCTGATGGCTTCTaGAATCCGAGTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PTWTKGRVHRTLIPSSSGVPDGF*NPSALL
Trigger: AAGGAGAGCACTCGGATTGCAGAAGCCATCAGGGAC...GCCAGAGGAGGATGGAATTAAAGTCCTGTGCACCCTCCCCTTTGTCCATGTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGATAGTCACACAGATTTaGGTCGGAAAGGAGACTGAG +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRIVTQI*VGKETE
Trigger: CTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTAT...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTATGGAAGCAACAGACTaGAGGATCCAAGTTCAGTCA +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARMEATD*RIQVQS
Trigger: TGACTGAACTTGGATCCTGCAGTCTGTTGCTTCCAT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AAGATTTCACCTGCTTTCACCCAATTGGTGGAACTGACTGTATGGAAACAACCACTGCTGGAGTCCCCTTaGAGCCCAGGGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: KISPAFTQLVELTVWKQPLLESP*SPGAQG
Trigger: CCCCTGTGCCCCTGGGCTGCAAGGGGACTCCAGCAG...TGGTTGTTTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGAAATCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTTCCTCTTCACTaGACTGTGCAGGTTCAATCC +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGQLPLH*TVQVQS
Trigger: GGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTG...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATCGCAGCATGACCTCCTaGCTGAACGTGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDRSMTS*LNVVGQ
Trigger: CTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCG...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATCCTTGGACAGCTCTCTaGCCAGGAAGGGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDPWTAL*PGRAGR
Trigger: CCTCCCTGCCCTTCCTGGCCAGAGAGCTGTCCAAGG...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGTGCATTTCAGCAAGTaGGGAAAGGACAGCGGTGCT +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTVHFSK*GKDSGA
Trigger: AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCAC...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAAAAATCACTGATCACATaGAAGCAACAGACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQEKSLIT*KQQTAG
Trigger: TCCTGCAGTCTGTTGCTTCCATGTGATCAGTGATTT...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTCTTCCCCATCCCCCTaGCCAATACCAGAAATCACT +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSSSPSP*PIPEIT
Trigger: AGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGA...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCAACCAAGGTGTCTATCTaGTCCCTGCCGCCATCAACT +
Preference number: 4 (lower is better)
Translates to: ALIVTQICVGKETEARCATKVSI*SLPPST
Trigger: AGTTGATGGCGGCAGGGACCAGATAGACACCTTGGT...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 72 bp AATGAGCCGCAATTCCTCAAAGACCTGCCCAGGCTCTaGGGAGTGACTTATGGGGGAAGGTACGGGAAAATG +
Preference number: 4 (lower is better)
Translates to: NEPQFLKDLPRL*GVTYGGRYGKM
Trigger: CATTTTCCCGTACCTTCCCCCATAAGTCACTCCCAAGAGCCTGGGCAGGTCTTTGAGGAATTGCGGCTCATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCACTGCTTCCCTGACTTaGTCCTCTTGTCCTTGGACA +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSTASLT*SSCPWT
Trigger: TGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGT...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCGCTCTTTCCAGGATCTaGAGGTCTGTGGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSALSRI*RSVGQF
Trigger: AAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGC...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp CAGAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTGATCACATGCACCAAACGGCATaGACCTTGTGTGGGATTTGG +
Preference number: 4 (lower is better)
Translates to: QSGNSSPSPWPIPEITDHMHQTA*TLCGIW
Trigger: CCAAATCCCACACAAGGTTCATGCCGTTTGGTGCAT...GTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTACACCCAGGACCTGTaGCTTAACAGCAAGATTTCC +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSYTQDL*LNSKIS
Trigger: GGAAATCTTGCTGTTAAGTCACAGGTCCTGGGTGTA...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGTGGAAGATCAAAAATaGAAGTCTGAGCTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWVEDQK*KSELCL
Trigger: GAGACAGAGCTCAGACTTTCATTTTTGATCTTCCAC...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAACCAGGCTCTTGGGAGTaGCTTATGGGGGAAGGTACG +
Preference number: 4 (lower is better)
Translates to: HELLKETRFPGREPRSSEPGSWE*LMGEGT
Trigger: CGTACCTTCCCCCATAAGTCACTCCCAAGAGCCTGG...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAATAAACTCCTCACAGTaGAAGAGGTGGTGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKINSSQ*KRWCSG
Trigger: GCCGGAGCACCACCTCTTGCACTGTGAGGAGTTTAT...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTTGTCCTTGGACATGTaGAACCCATTGAATTCATCA +
Preference number: 4 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPLSLDM*NPLNSS
Trigger: TGATGAATTCAATGGGTTGCACATGTCCAAGGACAA...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAATTGTCCTTGGACATGTaGAACCCATTGAATTCATCA +
Preference number: 4 (lower is better)
Translates to: VLGGALGRYSLGQLSGQELSLDM*NPLNSS
Trigger: TGATGAATTCAATGGGTTGCACATGTCCAAGGACAA...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGATTCAGGGGCATTATTTaGAAACCACTGGGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGFRGII*KPLGVV
Trigger: GACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAA...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTG +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKLFTGL*RFNPPL
Trigger: CAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGTCCCTGATGGCTTCTaGAATCCGAGTGCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKVPDGF*NPSALL
Trigger: AAGGAGAGCACTCGGATTGCAGAAGCCATCAGGGAC...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGGGAGGCCAAGTATGCTaGGTTTTCCATCCATTACAC +
Preference number: 4 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQGGQVC*VFHPLH
Trigger: GTGTAATGGATGGAAAACGCAGCATACTTGGCCTCC...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CTCAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTGCCAGGACAAACTCCATCAACTaGCACACAGTGAGAATTTAC +
Preference number: 4 (lower is better)
Translates to: LRATNTFHLPCPVHLIARTNSIN*HTVRIY
Trigger: GTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGT...CCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGAATTCGCTTCCGTTTATaGGAGGTCCCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGIRFRL*EVPLLF
Trigger: AAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAAT...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACACAGCTTCCTCTTCACTaGACTGTGCAGGTTCAATCC +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTQLPLH*TVQVQS
Trigger: GGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTG...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTACGCAGCATGACCTCCTaGCTGAACGTGGTGGGCCAG +
Preference number: 4 (lower is better)
Translates to: LFTNSINCHTVRIYGEILRSMTS*LNVVGQ
Trigger: CTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCG...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATAGTCATTTCAGCTTCTaGAGGGAAAAGATTCAGACC +
Preference number: 4 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDSHFSF*REKIQT
Trigger: GGTCTGAATCTTTTCCCTCCAGAAGCTGAAATGACT...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTACACAACCAGAGGTCTaGTATTTTCCATCCCAAATC +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARTQPEV*YFPSQI
Trigger: GATTTGGGATGGAAAATACCAGACCTCTGGTTGTGT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGCTCTTTCCAGGATCTaGAGGTCTGTGGGACAGTTT +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKALSRI*RSVGQF
Trigger: AAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGC...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTCCATCCTGAGAATCTaGGAATCTAGCTTTTTCTGG +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYSILRI*ESSFFW
Trigger: CCAGAAAAAGCTAGATTCTCAGATTCTCAGGATGGA...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGTTGTCCTTGGACATGTaGAACCCATTGAATTCATCA +
Preference number: 4 (lower is better)
Translates to: GADTVLWFPKHRAELEVGLSLDM*NPLNSS
Trigger: TGATGAATTCAATGGGTTGCACATGTCCAAGGACAA...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTTTGTCCTTGGACATGTaGAACCCATTGAATTCATCA +
Preference number: 4 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARLSLDM*NPLNSS
Trigger: TGATGAATTCAATGGGTTGCACATGTCCAAGGACAA...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCTTCAGGGGCATTATTTaGAAACCACTGGGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSFRGII*KPLGVV
Trigger: GACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAA...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATCTTCTGCAATCCGAGTaGTCTCCTTTCGCCGGTCGC +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDLLQSE*SPFAGR
Trigger: GCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAG...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAAGCCAAGAAAGGCTGGTaGCCAACAGGAAAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: HELLKETRFPGREPRSSEAKKGW*PTGKGK
Trigger: CTTCCCCTTTCCTGTTGGGCACCAGCCTTTCTTGGC...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CCTTACCCAGAATGGACGTTTCCAAGTCATCGACAAGGAATCTGGGGCCAACTGCACCTCCATAAGCTGTaGCCACTTCTTGCTGCCTTA +
Preference number: 4 (lower is better)
Translates to: PYPEWTFPSHRQGIWGQLHLHKL*PLLAAL
Trigger: TAAGGCAGCAAGAAGTGGGCACAGCTTATGGAGGTG...CAGTTGGCCCCAGATTCCTTGTCGATGACTTGGAAACGTCCATTCTGGGTAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAAATTCAGTCCACCCTaGAGCAAAAAGATTTCACCT +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRKFSPP*SKKISP
Trigger: AGGTGAAATCTTTTTGCTGCAGGGTGGACTGAATTT...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTCAGCATGGCTTACGTTaGATGGAGGAAACAACCCGT +
Preference number: 4 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALQHGLR*MEETTR
Trigger: ACGGGTTGTTTCCTCCATGCAACGTAAGCCATGCTG...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGGTCAGGAGCAGGAAATaGCATTTGTTCAGAACAAAT +
Preference number: 4 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRVRSRK*HLFRTN
Trigger: ATTTGTTCTGAACAAATGGCATTTCCTGCTCCTGAC...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAGAATCTGGGGCCAACTaGCAGGGTCAGGAGCAGGAA +
Preference number: 4 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGESGAN*QGQEQE
Trigger: TTCCTGCTCCTGACCCTGGCAGTTGGCCCCAGATTC...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACAGCTTCCTCTTCACTaGACTGTGCAGGTTCAATCC +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKQLPLH*TVQVQS
Trigger: GGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAATCCGCACGAGGCATTTaGACTCCTCTAACACCACGG +
Preference number: 4 (lower is better)
Translates to: HELLKETRFPGREPRSSESARGI*TPLTPR
Trigger: CCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGA...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AAGATTTCACCTGCTTTCACCCAATTGGTGGAACTGACTGTATGGAAACAACCAGGAAGGGCAGGGAGGTaGGGGAGGCCAAGTATGCTG +
Preference number: 4 (lower is better)
Translates to: KISPAFTQLVELTVWKQPGRAGR*GRPSML
Trigger: CAGCATACTTGGCCTCCCCCACCTCCCTGCCCTTCC...TGGTTGTTTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGAAATCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCACGCAATTTGGGACTaGGTCTGTTTCAGGATCATT +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSHAIWD*VCFRII
Trigger: AATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAATTACAGGATCCTACATaGACAAAGGGGAGGGTGCAC +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKLQDPT*TKGRVH
Trigger: GTGCACCCTCCCCTTTGTCCATGTAGGATCCTGTAA...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTGTGACAACAGGCATTTaGGCAAAAGCAGGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALVTTGI*AKAGVS
Trigger: GGAGACACCTGCTTTTGCCCAAATGCCTGTTGTCAC...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 72 bp TTCCACTGCATGGCTAACAGGATGGGAGGGAGTGGATaGCTAGAAAGGTCCCTGACTAAAGAGGTGTCCTCA +
Preference number: 4 (lower is better)
Translates to: FHCMANRMGGSG*LERSLTKEVSS
Trigger: TGAGGACACCTCTTTAGTCAGGGACCTTTCTAGCAATCCACTCCCTCCCATCCTGTTAGCCATGCAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATACAGCAGGATGTGCGTaGACCCTTCTTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDTAGCA*TLLPSA
Trigger: TGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGT...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp AATGCACCAAACGGCATGAACCTTGTGTGGGATTTGGTCCAGGGTAGTATGAAAACAGCAGGATGTGCGTaGACCCTTCTTCCTTCCGCA +
Preference number: 4 (lower is better)
Translates to: NAPNGMNLVWDLVQGSMKTAGCA*TLLPSA
Trigger: TGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGT...TTTCATACTACCCTGGACCAAATCCCACACAAGGTTCATGCCGTTTGGTGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGAACCAGAGAGAGCCATaGTGGCCAAGTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGNQREP*WPSLQV
Trigger: GACTTGGAGACTTGGCCATCATGGCTCTCTCTGGTT...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCTCAATGATTCCATCATaGATGAGAATGGAGAGAGAA +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGSMIPS*MRMERE
Trigger: TTCTCTCTCCATTCTCATTCATGATGGAATCATTGA...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAATTCGCTTCCGTTTATaGGAGGTCCCCTTGCTCTTT +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKIRFRL*EVPLLF
Trigger: AAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAAT...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACAGTTGCTTTCATTCTaGCGGACACTGTATCTGAGC +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKQLLSF*RTLYLS
Trigger: GCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCATAGGCTTCTTAAACTaGATAAAGGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PGPSWCISASGERTAVLGIGFLN*IKAFTK
Trigger: CTTTGTGAAGGCCTTTATCCAGTTTAAGAAGCCTAT...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATTCCGCACGAGGCATTTaGACTCCTCTAACACCACGG +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDSARGI*TPLTPR
Trigger: CCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGA...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGTTTTGCTCATTGGTCTaGAAATTCCCTAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: RGRHCALVSETQGRAGSWFCSLV*KFPKIG
Trigger: ACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAA...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTTTGCTCATTGGTCTaGAAATTCCCTAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: PFLDRHGAFQQVGKGQRCFCSLV*KFPKIG
Trigger: ACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAA...GCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTTGGGTGCTTGACCCATaGTTTAAACCTCACGCAGAA +
Preference number: 4 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALWVLDP*FKPHAE
Trigger: TTCTGCGTGAGGTTTAAACCATGGGTCAAGCACCCA...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTCTTGGGAGTGACTTATaGGGGAAGGTACGGGAAAAT +
Preference number: 4 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALLGSDL*GKVREN
Trigger: ATTTTCCCGTACCTTCCCCCATAAGTCACTCCCAAG...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCAAACCCCAAAAACAGTaGATACACTGTCAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSKPQKQ*IHCQGA
Trigger: AGCTCCTTGACAGTGTATCCACTGTTTTTGGGGTTT...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CAGAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTGATCACTCTTGCTCTCCAACATaGTCATTCAAATCCAAGCCA +
Preference number: 4 (lower is better)
Translates to: QSGNSSPSPWPIPEITDHSCSPT*SFKSKP
Trigger: TGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGA...GTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATAACCAGAGAGAGCCATaGTGGCCAAGTCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDNQREP*WPSLQV
Trigger: GACTTGGAGACTTGGCCATCATGGCTCTCTCTGGTT...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR TCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTTCTATTATTACAGCTaGGAACCGTTTTACACAGAG +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYFYYYS*EPFYTE
Trigger: CTCTGTGTAAAACGGTTCTCAGCTGTAATAATAGAA...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CAGAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTGATCACAAAATCCCTCCATCCTaGGAATCTGAGAATCTAGCT +
Preference number: 4 (lower is better)
Translates to: QSGNSSPSPWPIPEITDHKIPPS*ESENLA
Trigger: AGCTAGATTCTCAGATTCTCAGGATGGAGGGATTTT...GTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGAATTCGCCTACACATaGTCAAAACAACTACCCAGA +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTEFAYT*SKQLPR
Trigger: TCTGGGTAGTTGTTTTGATCATGTGTAGGCGAATTC...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATGAAGCCATGCCAGGCTaGGGAACTTGGCTCGCCGGT +
Preference number: 4 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHEAMPG*GTWLAG
Trigger: ACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTC...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATGCCTATCCCCACTCCTaGCCAACATCACGCAATTTG +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDAYPHS*PTSRNL
Trigger: CAAATTGCGTGATGTTGGGCAGGAGTGGGGATAGGC...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATTGGGGGCCCGTGAGCTaGGGCCCCTCAGACTTCATA +
Preference number: 4 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHWGPVS*GPSDFI
Trigger: TATGAAGTCTGAGGGGCCCCAGCTCACGGGCCCCCA...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAGCAGACACTGTGCTCTaGTTTCCGAAACACAGGGCA +
Preference number: 4 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGADTVL*FPKHRA
Trigger: TGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGC...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTTTTGCTCATTGGTCTaGAAATTCCCTAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: ISASGERTAVLGGALGRYFCSLV*KFPKIG
Trigger: ACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAA...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCAGAATCTAGCTTTTTCTaGGTGCTTGACCCATGGTTT +
Preference number: 4 (lower is better)
Translates to: ALIVTQICVGKETEARCAESSFF*VLDPWF
Trigger: AAACCATGGGTCAAGCACCCAGAAAAAGCTAGATTC...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATCAGGATGGGAGGGAGTaGATTGCTAGAAAGGTCCCT +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDQDGRE*IARKVP
Trigger: AGGGACCTTTCTAGCAATCCACTCCCTCCCATCCTG...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 72 bp GAGACTGAGGCCAGGTGTGCACAATCATTTTGCTCATaGGTCTGGAAATTCCCTAAGATTGGTCGTCCTCTG +
Preference number: 4 (lower is better)
Translates to: ETEARCAQSFCS*VWKFPKIGRPL
Trigger: CAGAGGACGACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAATGATTGTGCACACCTGGCCTCAGTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATAAATCCAAGCCAGGCTaGTGGGACCCATTTCCAAAG +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDKSKPG*WDPFPK
Trigger: CTTTGGAAATGGGTCCCATCAGCCTGGCTTGGATTT...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATTTGGAGGTACTGGACTaGTTCCCTGACTTGATCCTC +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDLEVLD*FPDLIL
Trigger: GAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAA...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR GCA 90 bp AATGCACCAAACGGCATGAACCTTGTGTGGGATTTGGTCCAGGGTAGTATGAAATATGGGAGGTCCCCTTaGTCTTTCCAGGATCTGAAG +
Preference number: 4 (lower is better)
Translates to: NAPNGMNLVWDLVQGSMKYGRSP*SFQDLK
Trigger: CTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATA...TTTCATACTACCCTGGACCAAATCCCACACAAGGTTCATGCCGTTTGGTGCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGATGTGCACAATCATTTTaGTCATTGGTCTGGAAATTC +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGCAQSF*SLVWKF
Trigger: GAATTTCCAGACCAATGAGCAAAATGATTGTGCACA...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCCCAAGTTCAGTCATTTaGCCCAAAGAAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSPSSVI*PKERSL
Trigger: AAGACTTCTTTCTTTGGGGCAAATGACTGAACTTGG...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAGCTGTGCCCACTTCTTaGTGCCTTATTCCACTCTCT +
Preference number: 4 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGAVPTS*CLIPLS
Trigger: AGAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGC...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCCAAAAAGATTTCACCTaGTTTCACCCAATTGGTGGA +
Preference number: 4 (lower is better)
Translates to: RESHDGQVSKSEALCRHSQKDFT*FHPIGG
Trigger: TCCACCAATTGGGTGAAAGCAGGTGAAATCTTTTTG...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CTCCATAAGCTGTGCCCACTTCTTGCTGCCTTATTCCACTCTCTTCAAAGAAGGAAACCCAAAGGTAATTaGAGGACGGGGCTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: LHKLCPLLAALFHSLQRRKPKGN*RTGLPK
Trigger: TTTTGGCAGCCCCGTCCTGCAATTACCTTTGGGTTT...CCTTCTTTGAAGAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGCTTATGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGTGTCTATCTGGTCCCTaGCGCCATCAACTCAATCAA +
Preference number: 4 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGCLSGP*RHQLNQ
Trigger: TTGATTGAGTTGATGGCGGCAGGGACCAGATAGACA...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAGGATCTGAAGGTCTGTaGGACAGTTTCTCAACCGAC +
Preference number: 4 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGGSEGL*DSFSTD
Trigger: GTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCC...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAAGACAACCCCAAATaGTTTCCCTTAAATATCTAC +
Preference number: 4 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGQDNPK*FPLNIY
Trigger: GTAGATATTTAAGGGAAACCATTTGGGGTTGTCTTG...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAATATCAACGTGTTCTTTaGAACTCAAAGCTCAGGGCC +
Preference number: 4 (lower is better)
Translates to: HELLKETRFPGREPRSSEYQRVL*NSKLRA
Trigger: GGCCCTGAGCTTTGAGTTTCAAAGAACACGTTGATA...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp CTCCATAAGCTGTGCCCACTTCTTGCTGCCTTATTCCACTCTCTTCAAAGAAGGCCCAATTGGTGGAACTaGCTGTATGGAAACAACCAA +
Preference number: 4 (lower is better)
Translates to: LHKLCPLLAALFHSLQRRPNWWN*LYGNNQ
Trigger: TTGGTTGTTTCCATACAGTCAGTTCCACCAATTGGG...CCTTCTTTGAAGAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGCTTATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AATGCACCAAACGGCATGAACCTTGTGTGGGATTTGGTCCAGGGTAGTATGAAATTCAGGGGCATTATTTaGAAACCACTGGGGGTAGTC +
Preference number: 4 (lower is better)
Translates to: NAPNGMNLVWDLVQGSMKFRGII*KPLGVV
Trigger: GACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAA...TTTCATACTACCCTGGACCAAATCCCACACAAGGTTCATGCCGTTTGGTGCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp TTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACAGAAATCCTTCTGTTTTCACCTGGACCGTCATGGTaGATTTCAGCAAGTGGGGAA +
Preference number: 4 (lower is better)
Translates to: LHRGAALFLLSTEILLFSPGPSW*ISASGE
Trigger: TTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG...TGAAAACAGAAGGATTTCTGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAATAGGCTTCTTAAACTaGATAAAGGCCTTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTIGFLN*IKAFTK
Trigger: CTTTGTGAAGGCCTTTATCCAGTTTAAGAAGCCTAT...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CCA 90 bp TTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACAGAAATCCTTCTGTTTTCATGGTCTTCCCCTTCCTaGACCGTCATGGTGCATTTC +
Preference number: 4 (lower is better)
Translates to: LHRGAALFLLSTEILLFSWSSPS*TVMVHF
Trigger: GAAATGCACCATGACGGTCCAGGAAGGGGAAGACCA...TGAAAACAGAAGGATTTCTGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAAAGGAGATCTCATTCCTaGTCATTGCTCCCTATGTAC +
Preference number: 4 (lower is better)
Translates to: HELLKETRFPGREPRSSERRSHS*SLLPMY
Trigger: GTACATAGGGAGCAATGACCAGGAATGAGATCTCCT...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp TTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACAGAAATCCTTCTGTTTTCAGGCGGACACTGTATCTaGGCCTTTTGTCAAAGACGT +
Preference number: 4 (lower is better)
Translates to: LHRGAALFLLSTEILLFSGGHCI*AFCQRR
Trigger: ACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCC...TGAAAACAGAAGGATTTCTGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGTCAAAAATGAAAGTCTaGGCTCTGTCTCAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGSKMKV*ALSQES
Trigger: GCTTTCCTGAGACAGAGCTCAGACTTTCATTTTTGA...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTATTCAGTCCATCAGCATaGCTTACGTTGCATGGAGGA +
Preference number: 4 (lower is better)
Translates to: LFTNSINCHTVRIYGEILFSPSA*LTLHGG
Trigger: TCCTCCATGCAACGTAAGCCATGCTGATGGACTGAA...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATGCCGGACTTCTTTCATaGTCTCAGGTGTCAGGGCAT +
Preference number: 4 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHAGLLS*SQVSGH
Trigger: ATGCCCTGACACCTGAGATCATGAAAGAAGTCCGGC...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AAGATTTCACCTGCTTTCACCCAATTGGTGGAACTGACTGTATGGAAACAACCATCTTCCAAATGGTGGTaGGAAGGTATGACCACCCTA +
Preference number: 4 (lower is better)
Translates to: KISPAFTQLVELTVWKQPSSKWW*EGMTTL
Trigger: TAGGGTGGTCATACCTTCTCACCACCATTTGGAAGA...TGGTTGTTTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGAAATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAATACAATATCTGGGTTTaGAAATCACTCAATTGGGTT +
Preference number: 4 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKYNIWV*KSLNWV
Trigger: AACCCAATTGAGTGATTTGCAAACCCAGATATTGTA...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAATGGAAAGCTCACATTTaGTTTCTCAAAGGAGGAGAT +
Preference number: 4 (lower is better)
Translates to: HELLKETRFPGREPRSSEWKAHI*FLKGGD
Trigger: ATCTCCTCCTTTGAGAAAGCAAATGTGAGCTTTCCA...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGGATGCTGAATATAACTaGGCCCAATCAGAAGTTCAA +
Preference number: 4 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGDAEYN*AQSEVQ
Trigger: TTGAACTTCTGATTGGGCGCAGTTATATTCAGCATC...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp TTACAGCTGAGAACCGTTTTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACACAGACATTATTTCTATaGCGGAAGGGGCACATTAAG +
Preference number: 4 (lower is better)
Translates to: LQLRTVLHRGAALFLLSTQTLFL*RKGHIK
Trigger: CTTAATGTGCCCCTTCCGGCATAGAAATAATGTCTG...TGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATTTGCAAAGGTCTCGGTaGATTTTGGTGTATGCTACA +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDLQRSR*ILVYAT
Trigger: TGTAGCATACACCAAAATCCACCGAGACCTTTGCAA...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATGTAGAAACACCAACCTaGGATAGTGAGCTTCAATTA +
Preference number: 4 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDVETPT*DSELQL
Trigger: TAATTGAAGCTCACTATCTCAGGTTGGTGTTTCTAC...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp CTGTTCACAAACTCCATCAACTGCCACACAGTGAGAATTTACGGGGAGATCTTACTAGCTTTTTCTGGGTaGTTGACCCATGGTTTAAAC +
Preference number: 4 (lower is better)
Translates to: LFTNSINCHTVRIYGEILLAFSG*LTHGLN
Trigger: GTTTAAACCATGGGTCAAGCACCCAGAAAAAGCTAG...TAAGATCTCCCCGTAAATTCTCACTGTGTGGCAGTTGATGGAGTTTGTGAACAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp TTACAGCTGAGAACCGTTTTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACATGCACAAAGTCTTCTTaGAACAGGGTTGTTAACTCA +
Preference number: 4 (lower is better)
Translates to: LQLRTVLHRGAALFLLSTCTKSS*NRVVNS
Trigger: TGAGTTAACAACCCTGTTCCAAGAAGACTTTGTGCA...TGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
3UTR CAA 72 bp CCCTGCAGCAAAAAGATTTCACCTGCTTTCACCCAATaGGTGGAACTGACTGTATGGAAACAACCAAAATAC +
Preference number: 4 (lower is better)
Translates to: PCSKKISPAFTQ*VELTVWKQPKY
Trigger: GTATTTTGGTTGTTTCCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGGTGAAATCTTTTTGCTGCAGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAAAACTAGAAAACAGATaGGTCATTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGKLENR*VISASG
Trigger: TCCAGAAGCTGAAATGACTCATCTGTTTTCTAGTTT...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR TCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATTTTGTTCAGAACAAATaGTGGACCAGCAGCCTTCCC +
Preference number: 4 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHFVQNK*WTSSLP
Trigger: GGGAAGGCTGCTGGTCCATCATTTGTTCTGAACAAA...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AATGCACCAAACGGCATGAACCTTGTGTGGGATTTGGTCCAGGGTAGTATGAAATTTTGCTCATTGGTCTaGAAATTCCCTAAGATTGGT +
Preference number: 4 (lower is better)
Translates to: NAPNGMNLVWDLVQGSMKFCSLV*KFPKIG
Trigger: ACCAATCTTAGGGAATTTCCAGACCAATGAGCAAAA...TTTCATACTACCCTGGACCAAATCCCACACAAGGTTCATGCCGTTTGGTGCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp TTACAGCTGAGAACCGTTTTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACAGTGGAACTGACTGTATaGAAACAACCAAAATACAGA +
Preference number: 4 (lower is better)
Translates to: LQLRTVLHRGAALFLLSTVELTV*KQPKYR
Trigger: TCTGTATTTTGGTTGTTTCCATACAGTCAGTTCCAC...TGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AATGCACCAAACGGCATGAACCTTGTGTGGGATTTGGTCCAGGGTAGTATGAAAGGAAAAACATTTTCATaGTTCAGAGAGAACATTTCC +
Preference number: 4 (lower is better)
Translates to: NAPNGMNLVWDLVQGSMKGKTFS*FRENIS
Trigger: GGAAATGTTCTCTCTGAAGCATGAAAATGTTTTTCC...TTTCATACTACCCTGGACCAAATCCCACACAAGGTTCATGCCGTTTGGTGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AATGCACCAAACGGCATGAACCTTGTGTGGGATTTGGTCCAGGGTAGTATGAAAAATCATTTTGCTCATTaGTCTGGAAATTCCCTAAGA +
Preference number: 4 (lower is better)
Translates to: NAPNGMNLVWDLVQGSMKNHFAH*SGNSLR
Trigger: TCTTAGGGAATTTCCAGACCAATGAGCAAAATGATT...TTTCATACTACCCTGGACCAAATCCCACACAAGGTTCATGCCGTTTGGTGCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGACATCAGGCTAGATGTTaGATCAATGATATAAGGTTA +
Preference number: 4 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGHQARC*INDIRL
Trigger: TAACCTTATATCATTGATCCAACATCTAGCCTGATG...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR GCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATAGTAAACTGTGTTTTTaGAGAATGACAGGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHSKLCF*RMTGLG
Trigger: CCCCAAGCCTGTCATTCTGCAAAAACACAGTTTACT...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CCA 90 bp AACTCAATCAAACTCTTCGGATTAGCCATGAATTACAGACTGCATTCAGTCCATATGGCTTACGTTGCATaGAGGAAACAACCCGTATTA +
Preference number: 4 (lower is better)
Translates to: NSIKLFGLAMNYRLHSVHMAYVA*RKQPVL
Trigger: TAATACGGGTTGTTTCCTCCATGCAACGTAAGCCAT...ATGGACTGAATGCAGTCTGTAATTCATGGCTAATCCGAAGAGTTTGATTGAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CCA 90 bp TTGGGGGCTGCCTATGCGCAGAATCAGAGCGGGCGGCGGCGGGGCTaGCGTAACCGGCAGCAGCGGCGGCGGCGGCGGCGGCGGCACGAG +
Preference number: 5 (lower is better)
Translates to: LGAAYAQNQSGRRRG*RNRQQRRRRRRRHE
Trigger: CTCGTGCCGCCGCCGCCGCCGCCGCCGCTGCTGCCGGTTACGCCAGCCCCGCCGCCGCCCGCTCTGATTCTGCGCATAGGCAGCCCCCAA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS GCA 90 bp GGCTCGCCGGTGTGCGCGTCTGCTCGCTCGCGCCCTCCGTGCGTGTaGGCGCGGGGTCCGGTGTGCGCGTGTGTGTGCGCGCGTGTGTGT +
Preference number: 5 (lower is better)
Translates to: GSPVCASARSRPPCV*ARGPVCACVCARVC
Trigger: ACACACACGCGCGCACACACACGCGCACACCGGACCCCGCGCGCACACGCACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGCGAGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS GCA 90 bp GAAGCCATGCCAGGCTGCGGAACTTGGCTCGCCGGTGTGCGCGTCTaGTCGCTCGCGCCCTCCGTGCGTGTGCGCGCGGGGTCCGGTGTG +
Preference number: 5 (lower is better)
Translates to: EAMPGCGTWLAGVRV*SLAPSVRVRAGSGV
Trigger: CACACCGGACCCCGCGCGCACACGCACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 90 bp GGTCCCCAGAAGCCATGCCAGGCTGCGGAACTTGGCTCGCCGGTGTaGGCGTCTGCTCGCTCGCGCCCTCCGTGCGTGTGCGCGCGGGGT +
Preference number: 5 (lower is better)
Translates to: GPQKPCQAAELGSPV*ASARSRPPCVCARG
Trigger: ACCCCGCGCGCACACGCACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 90 bp CGCCCAGGATCTGGGGGAAGGTGTAGGAGGAGCAGCCAGCAGGCGTaGGGCGGATGGTGGCGTAGGGCGTCTGGAACCAGGCCTTCTCAC +
Preference number: 5 (lower is better)
Translates to: RPGSGGRCRRSSQQA*GGWWRRASGTRPSH
Trigger: GTGAGAAGGCCTGGTTCCAGACGCCCTACGCCACCATCCGCCTCACGCCTGCTGGCTGCTCCTCCTACACCTTCCCCCAGATCCTGGGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 90 bp GTGGGCCAGAAGACCTGCGACACCAGCCCCCTGCTGCAGGCCTCCTaGGCGGTGAGCTTCCGCCCACAGAACAGCATCTCATTGGCCAGC +
Preference number: 5 (lower is better)
Translates to: VGQKTCDTSPLLQAS*AVSFRPQNSISLAS
Trigger: GCTGGCCAATGAGATGCTGTTCTGTGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 90 bp ACGGCACTGCAGGATGCCATCTCCTTGACCCGCAGCATGACCTCCTaGCTGAACGTGGTGGGCCAGAAGACCTGCGACACCAGCCCCCTG +
Preference number: 5 (lower is better)
Translates to: TALQDAISLTRSMTS*LNVVGQKTCDTSPL
Trigger: CAGGGGGCTGGTGTCGCAGGTCTTCTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTGCAGTGCCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATGCTGCTGGAGTCCCCTaGCAGCCCAGGGGCACAGGG +
Preference number: 5 (lower is better)
Translates to: AFQQVGKGQRCLAEPWEDAAGVP*QPRGTG
Trigger: CCCTGTGCCCCTGGGCTGCAAGGGGACTCCAGCAGC...ATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACGCCAGGCTGCGGAACTaGGCTCGCCGGTGTGCGCGT +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYARLRN*ARRCAR
Trigger: ACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGC...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTGCCAGGCTGCGGAACTaGGCTCGCCGGTGTGCGCGT +
Preference number: 5 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAARLRN*ARRCAR
Trigger: ACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGC...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTTCGTCTGTGGCTGCGTaGCAGAGCGCTCGCCGGACT +
Preference number: 5 (lower is better)
Translates to: ASGERTAVLGGALGRYSLSSVAA*QSARRT
Trigger: AGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGA...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTCGTCTGTGGCTGCGTaGCAGAGCGCTCGCCGGACT +
Preference number: 5 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPSSVAA*QSARRT
Trigger: AGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGA...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCCCAGGGCCGGCCCATaGATGGCCACCACGATAGGC +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGPRAGP*MATTIG
Trigger: GCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGACCTGCCCAGGCTCTaGGGAGTGACTTATGGGGGA +
Preference number: 5 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQDLPRL*GVTYGG
Trigger: TCCCCCATAAGTCACTCCCAAGAGCCTGGGCAGGTC...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 90 bp GGTAGGAATAATCCAGGCCGCTGCAGAACACGCTCCCCACTGCGCTaGGGAGCAGCAGTTTGCTGTCGTCTGTGGCTGCGTTGCAGAGCG +
Preference number: 5 (lower is better)
Translates to: GRNNPGRCRTRSPLR*GAAVCCRLWLRCRA
Trigger: CGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATTCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCCAGGCTGCGGAACTaGGCTCGCCGGTGTGCGCGT +
Preference number: 5 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTARLRN*ARRCAR
Trigger: ACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGC...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTGAGCTGGGGCCCGACTGCTTCCCTGACTaGATCCTCTTGTCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GFRNTGQSWKLGARELGPDCFPD*ILLSLD
Trigger: GTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTC...GGGCCCCAGCTCACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAACTGAGGAGCAGCAGTTaGCTGTCGTCTGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: VLGGALGRYSLGQLSGQELRSSS*LSSVAA
Trigger: CGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAG...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCTGAGGAGCAGCAGTTaGCTGTCGTCTGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPLRSSS*LSSVAA
Trigger: CGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACCCAGGGCCGGCCCATaGATGGCCACCACGATAGGC +
Preference number: 5 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGPRAGP*MATTIG
Trigger: GCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGG...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCAGGATGCCATCTCCTaGACCCGCAGCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPQDAIS*TRSMTS
Trigger: GGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 90 bp GCTCCCCACTGCGCTGAGGAGCAGCAGTTTGCTGTCGTCTGTGGCTaGGTTGCAGAGCGCTCGCCGGACTTCTTTCATGATCTCAGGTGT +
Preference number: 5 (lower is better)
Translates to: APHCAEEQQFAVVCG*VAERSPDFFHDLRC
Trigger: ACACCTGAGATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCCACCG +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGRFNPP*VRAEPP
Trigger: CGGTGGCTCTGCTCTGACCAACGGGGGATTGAACCT...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS-3UTR CAA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGATCGTCTGTGGCTGCGTaGCAGAGCGCTCGCCGGACT +
Preference number: 5 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGSSVAA*QSARRT
Trigger: AGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGA...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGCTGAGGAGCAGCAGTTaGCTGTCGTCTGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRLRSSS*LSSVAA
Trigger: CGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAG...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCTGAGGAGCAGCAGTTaGCTGTCGTCTGTGGCTGCG +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGLRSSS*LSSVAA
Trigger: CGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCACCCAGGGCCGGCCCATaGATGGCCACCACGATAGGC +
Preference number: 5 (lower is better)
Translates to: ALIVTQICVGKETEARCAPRAGP*MATTIG
Trigger: GCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGG...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCCTCCGCACGAGGCATTaGGACTCCTCTAACACCACG +
Preference number: 5 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPLRTRH*DSSNTT
Trigger: CGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAG...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 5 (lower is better)
Translates to: RHGAFQQVGKGQRCLAEPTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...GGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CTCAGGGCCACGAATACATTCCACCTGCCCTGCCCAGTGCACCTGATTGCCAGGACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 5 (lower is better)
Translates to: LRATNTFHLPCPVHLIARTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...CCTGGCAATCAGGTGCACTGGGCAGGGCAGGTGGAATGTATTCGTGGCCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS GCA 90 bp TCTTGTCTACAATCCTTTCAACCTCGTAAAGGTCCCCAGAAGCCATaGCAGGCTGCGGAACTTGGCTCGCCGGTGTGCGCGTCTGCTCGC +
Preference number: 5 (lower is better)
Translates to: SCLQSFQPRKGPQKP*QAAELGSPVCASAR
Trigger: GCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACCTTTACGAGGTTGAAAGGATTGTAGACAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGTTATGGGAGGTCCCCTaGCTCTTTCCAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQLWEVP*LFPGSE
Trigger: TTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAA...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCCACCG +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYRFNPP*VRAEPP
Trigger: CGGTGGCTCTGCTCTGACCAACGGGGGATTGAACCT...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS-3UTR CAA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGTCTCGAAACCGACAGTaGCTTTCATTCTGGCGGACA +
Preference number: 5 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQSRNRQ*LSFWRT
Trigger: TGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGA...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACATCGTCTGTGGCTGCGTaGCAGAGCGCTCGCCGGACT +
Preference number: 5 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTSSVAA*QSARRT
Trigger: AGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGA...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAACCCAGGGCCGGCCCATaGATGGCCACCACGATAGGC +
Preference number: 5 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKPRAGP*MATTIG
Trigger: GCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGG...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGCTCCGCACGAGGCATTaGGACTCCTCTAACACCACG +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGLRTRH*DSSNTT
Trigger: CGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAG...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 5 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 90 bp ACCGACGGGCCTCGACTGTCACGCAGCAGCTTGGAGGTACTGGACTaGTTCCCTGACTTGATCCTCTTGTCCTTGGACATGTGCAACCCA +
Preference number: 5 (lower is better)
Translates to: TDGPRLSRSSLEVLD*FPDLILLSLDMCNP
Trigger: TGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACAGTCGAGGCCCGTCGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 90 bp CGTTTATGGGAGGTCCCCTTGCTCTTTCCAGGATCTGAAGGTCTGTaGGACAGTTTCTCAACCGACGGGCCTCGACTGTCACGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: RLWEVPLLFPGSEGL*DSFSTDGPRLSRSS
Trigger: GCTGCTGCGTGACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGAAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCCACCG +
Preference number: 5 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGRFNPP*VRAEPP
Trigger: CGGTGGCTCTGCTCTGACCAACGGGGGATTGAACCT...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS-3UTR CAA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCCAGGATGCCATCTCCTaGACCCGCAGCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSQDAIS*TRSMTS
Trigger: GGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTG...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCAGGATGCCATCTCCTaGACCCGCAGCATGACCTCC +
Preference number: 5 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQQDAIS*TRSMTS
Trigger: GGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTG...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACACCTTGACAAACTCCTaGGCCGGGGCAGACACTGTG +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYTLTNS*AGADTV
Trigger: CACAGTGTCTGCCCCGGCCAAGGAGTTTGTCAAGGT...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 90 bp CCATCCTCAGCTCCCTCAGGTGTCAGGGCATTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGCGTGAACCCTTCTTCCTTCCGCACA +
Preference number: 5 (lower is better)
Translates to: PSSAPSGVRALLSEV*LDSRMCVNPSSFRT
Trigger: TGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACAATGCCCTGACACCTGAGGGAGCTGAGGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS-3UTR CAA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATGCCAGGCTGCGGAACTaGGCTCGCCGGTGTGCGCGT +
Preference number: 5 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDARLRN*ARRCAR
Trigger: ACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGC...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGACTGCTTCCCTGACTaGATCCTCTTGTCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: RGRHCALVSETQGRAGSWDCFPD*ILLSLD
Trigger: GTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTC...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGACTGCTTCCCTGACTaGATCCTCTTGTCCTTGGAC +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGDCFPD*ILLSLD
Trigger: GTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTC...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTTTATGGGAGGTCCCCTaGCTCTTTCCAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: ASGERTAVLGGALGRYSLLWEVP*LFPGSE
Trigger: TTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAA...AAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGGAATCTCGAAACCGACAGTaGCTTTCATTCTGGCGGACA +
Preference number: 5 (lower is better)
Translates to: VLGGALGRYSLGQLSGQESRNRQ*LSFWRT
Trigger: TGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGA...TTCCTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CGGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGTCAGCATGGCTTACGTaGCATGGAGGAAACAACCCG +
Preference number: 5 (lower is better)
Translates to: RGRHCALVSETQGRAGSWSAWLT*HGGNNP
Trigger: CGGGTTGTTTCCTCCATGCAACGTAAGCCATGCTGA...CCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGCCTGACTTGATCCTCTaGTCCTTGGACATGTGCAAC +
Preference number: 5 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRPDLIL*SLDMCN
Trigger: GTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGG...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCCCTGACTTGATCCTCTaGTCCTTGGACATGTGCAAC +
Preference number: 5 (lower is better)
Translates to: PGPSWCISASGERTAVLGPDLIL*SLDMCN
Trigger: GTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGG...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGTTATGGGAGGTCCCCTaGCTCTTTCCAGGATCTGAA +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGLWEVP*LFPGSE
Trigger: TTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAA...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCCGAGC +
Preference number: 5 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALRFNPP*VRAEPS
Trigger: GCTCGGCTCTGCTCTGACCAACGGGGGATTGAACCT...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp GGGGCAGACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGTGTGACAACAGGCATTaGGGCAAAAGCAGGTGTCTC +
Preference number: 5 (lower is better)
Translates to: GADTVLWFPKHRAELEVGCDNRH*GKSRCL
Trigger: GAGACACCTGCTTTTGCCCAAATGCCTGTTGTCACA...CCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTATGGGAGGGAGTGGATaGCTAGAAAGGTCCCTGACT +
Preference number: 5 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAMGGSG*LERSLT
Trigger: AGTCAGGGACCTTTCTAGCAATCCACTCCCTCCCAT...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 90 bp AATTCGCTTCCGTTTATGGGAGGTCCCCTTGCTCTTTCCAGGATCTaGAGGTCTGTGGGACAGTTTCTCAACCGACGGGCCTCGACTGTC +
Preference number: 5 (lower is better)
Translates to: NSLPFMGGPLALSRI*RSVGQFLNRRASTV
Trigger: GACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 90 bp CCCAGGGCCGGCCCATTGATGGCCACCACGATAGGCTTCTTAAACTaGATAAAGGCCTTCACAAAGTCCCTGATGGCTTCTGCAATCCGA +
Preference number: 5 (lower is better)
Translates to: PRAGPLMATTIGFLN*IKAFTKSLMASAIR
Trigger: TCGGATTGCAGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAGTTTAAGAAGCCTATCGTGGTGGCCATCAATGGGCCGGCCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCTTGATCCTCTTGTCCTaGGACATGTGCAACCCATTG +
Preference number: 5 (lower is better)
Translates to: PGPSWCISASGERTAVLGLILLS*DMCNPL
Trigger: CAATGGGTTGCACATGTCCAAGGACAAGAGGATCAA...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACCCTGACTTGATCCTCTaGTCCTTGGACATGTGCAAC +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYPDLIL*SLDMCN
Trigger: GTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGG...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGTTTCAGGGGCATTATTaGCAAACCACTGGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRFQGHY*QTTGGS
Trigger: ACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAAA...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACTCTCGAAACCGACAGTaGCTTTCATTCTGGCGGACA +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYSRNRQ*LSFWRT
Trigger: TGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGA...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GCGGTGCTTGGCGGAGCCCTGGGAAGATACAGCCTTGGACAGCTCTCTGGCCAGTCATTCTTAGTGATTTaGATGGCTGTTACCCAGACA +
Preference number: 5 (lower is better)
Translates to: AVLGGALGRYSLGQLSGQSFLVI*MAVTQT
Trigger: TGTCTGGGTAACAGCCATCAAAATCACTAAGAATGA...CTGGCCAGAGAGCTGTCCAAGGCTGTATCTTCCCAGGGCTCCGCCAAGCACCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp ACACTGTGCTCTGGTTTCCGAAACACAGGGCAGAGCTGGAAGTTGGGGGCCCGTAGGTCTCGGTGGATTTaGGTGTATGCTACATCCATG +
Preference number: 5 (lower is better)
Translates to: TLCSGFRNTGQSWKLGARRSRWI*VYATSM
Trigger: CATGGATGTAGCATACACCAAAATCCACCGAGACCT...ACGGGCCCCCAACTTCCAGCTCTGCCCTGTGTTTCGGAAACCAGAGCACAGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 90 bp GCCTCGACTGTCACGCAGCAGCTTGGAGGTACTGGACTGCTTCCCTaGCTTGATCCTCTTGTCCTTGGACATGTGCAACCCATTGAATTC +
Preference number: 5 (lower is better)
Translates to: ASTVTQQLGGTGLLP*LDPLVLGHVQPIEF
Trigger: GAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACAGTCGAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 90 bp TCAGGGCATTGTTATCCGAGGTCTGACTGGACAGCAGGATGTGCGTaGACCCTTCTTCCTTCCGCACAACGATGTCTCGAAACCGACAGT +
Preference number: 5 (lower is better)
Translates to: SGHCYPRSDWTAGCA*TLLPSAQRCLETDS
Trigger: ACTGTCGGTTTCGAGACATCGTTGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACAATGCCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000567924.1
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTTGATCCTCTTGTCCTaGGACATGTGCAACCCATTG +
Preference number: 5 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGALILLS*DMCNPL
Trigger: CAATGGGTTGCACATGTCCAAGGACAAGAGGATCAA...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTTTCAGGGGCATTATTaGCAAACCACTGGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGAFQGHY*QTTGGS
Trigger: ACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAAA...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp GTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGAAAGAGGTGTCCTCAATaGCCCACCCACAGCTATTCT +
Preference number: 5 (lower is better)
Translates to: VVFPFLDRHGAFQQVGKGKRCPQ*PTHSYS
Trigger: AGAATAGCTGTGGGTGGGCAATTGAGGACACCTCTT...TCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 90 bp TCTGGGTCTGCCCCTTGGCTAAGTCTGTGTCCACGATCAGTTCAGTaGGTCCCTCTCCCCATGGTCTTCATCCATAAGATGAGAGGGTAT +
Preference number: 5 (lower is better)
Translates to: SGSAPWLSLCPRSVQ*VPLPMVFIHKMRGY
Trigger: ATACCCTCTCATCTTATGGATGAAGACCATGGGGAGAGGGACTCACTGAACTGATCGTGGACACAGACTTAGCCAAGGGGCAGACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS-3UTR CAA 90 bp TCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCTTGATCCTCTTGTCCTaGGACATGTGCAACCCATTG +
Preference number: 5 (lower is better)
Translates to: SSPSWTVMVHFSKWGKDSLILLS*DMCNPL
Trigger: CAATGGGTTGCACATGTCCAAGGACAAGAGGATCAA...GCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCTCCGCACGAGGCATTaGGACTCCTCTAACACCACG +
Preference number: 5 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGLRTRH*DSSNTT
Trigger: CGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAG...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp GCCCTAATAGTCACACAGATTTGCGTCGGAAAGGAGACTGAGGCCAGGTGTGCACCAACATCACGCAATTaGGGACTGGGTCTGTTTCAG +
Preference number: 5 (lower is better)
Translates to: ALIVTQICVGKETEARCAPTSRN*GLGLFQ
Trigger: CTGAAACAGACCCAGTCCCAAATTGCGTGATGTTGG...TGCACACCTGGCCTCAGTCTCCTTTCCGACGCAAATCTGTGTGACTATTAGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp CAGAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTGATCACCCTGCTTTCACCCAATaGGTGGAACTGACTGTATGG +
Preference number: 5 (lower is better)
Translates to: QSGNSSPSPWPIPEITDHPAFTQ*VELTVW
Trigger: CCATACAGTCAGTTCCACCAATTGGGTGAAAGCAGG...GTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 90 bp ACTTCTTTCATGATCTCAGGTGTCAGGGCATTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGCGTGAACCCTTCTTCCTTCCGCACA +
Preference number: 5 (lower is better)
Translates to: TSFMISGVRALLSEV*LDSRMCVNPSSFRT
Trigger: TGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACAATGCCCTGACACCTGAGATCATGAAAGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCTTGATCCTCTTGTCCTaGGACATGTGCAACCCATTG +
Preference number: 5 (lower is better)
Translates to: RESHDGQVSKSEALCRHSLILLS*DMCNPL
Trigger: CAATGGGTTGCACATGTCCAAGGACAAGAGGATCAA...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCTTTCAGGGGCATTATTaGCAAACCACTGGGGGTAGT +
Preference number: 5 (lower is better)
Translates to: RESHDGQVSKSEALCRHSFQGHY*QTTGGS
Trigger: ACTACCCCCAGTGGTTTGCAAATAATGCCCCTGAAA...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp TGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGACATTCACCCATATCTaGCTCTCCAACATGATCATT +
Preference number: 5 (lower is better)
Translates to: WTVMVHFSKWGKDSGAWRTFTHI*LSNMII
Trigger: AATGATCATGTTGGAGAGCAAGATATGGGTGAATGT...CCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AAAGTGGTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAATCTCGAAACCGACAGTaGCTTTCATTCTGGCGGACA +
Preference number: 5 (lower is better)
Translates to: KVVFPFLDRHGAFQQVGKSRNRQ*LSFWRT
Trigger: TGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGA...TTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGACCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATCTCCGCACGAGGCATTaGGACTCCTCTAACACCACG +
Preference number: 5 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDLRTRH*DSSNTT
Trigger: CGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAG...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGTGTGCACAATCATTTaGCTCATTGGTCTGGAAATT +
Preference number: 5 (lower is better)
Translates to: PGPSWCISASGERTAVLGVCTII*LIGLEI
Trigger: AATTTCCAGACCAATGAGCAAAATGATTGTGCACAC...GCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp GTCTTCCCCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGAACCTTGTGTGGGATTaGGTCCAGGGTAGTATGAAA +
Preference number: 5 (lower is better)
Translates to: VFPFLDRHGAFQQVGKGQNLVWD*VQGSMK
Trigger: TTTCATACTACCCTGGACCAAATCCCACACAAGGTT...CTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGGGGAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 90 bp TGTCTCGAAACCGACAGTTGCTTTCATTCTGGCGGACACTGTATCTaGGCCTTTTGTCAAAGACGTAGTCCTTCTCCGCTTCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: CLETDSCFHSGGHCI*AFCQRRSPSPLPAS
Trigger: GGAAGCTGGAAGCGGAGAAGGACTACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 90 bp AGTTTAGCTGGAAAAGCCCAAGATGTGATGTTTGGATTCTGGGTCTaGCCCTTGGCTAAGTCTGTGTCCACGATCAGTTCAGTGAGTCCC +
Preference number: 5 (lower is better)
Translates to: SLAGKAQDVMFGFWV*PLAKSVSTISSVSP
Trigger: GGGACTCACTGAACTGATCGTGGACACAGACTTAGCCAAGGGGCAGACCCAGAATCCAAACATCACATCTTGGGCTTTTCCAGCTAAACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACGACATGTGCAACCCATaGAATTCATCAATAAACTCC +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYDMCNP*NSSINS
Trigger: GGAGTTTATTGATGAATTCAATGGGTTGCACATGTC...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp CCTTCCTGGACCGTCATGGTGCATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTACATTCACCCATATCTaGCTCTCCAACATGATCATT +
Preference number: 5 (lower is better)
Translates to: PSWTVMVHFSKWGKDSGATFTHI*LSNMII
Trigger: AATGATCATGTTGGAGAGCAAGATATGGGTGAATGT...AGCACCGCTGTCCTTTCCCCACTTGCTGAAATGCACCATGACGGTCCAGGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp ATTTCAGCAAGTGGGGAAAGGACAGCGGTGCTTGGCGGAGCCCTGGGAAGATACACATTCACCCATATCTaGCTCTCCAACATGATCATT +
Preference number: 5 (lower is better)
Translates to: ISASGERTAVLGGALGRYTFTHI*LSNMII
Trigger: AATGATCATGTTGGAGAGCAAGATATGGGTGAATGT...GTATCTTCCCAGGGCTCCGCCAAGCACCGCTGTCCTTTCCCCACTTGCTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGAGCTGTGCCCACTTCTaGCTGCCTTATTCCACTCTC +
Preference number: 5 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGSCAHF*LPYSTL
Trigger: GAGAGTGGAATAAGGCAGCAAGAAGTGGGCACAGCT...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp CAGAGTGGGAACTCTTCCCCATCCCCCTGGCCAATACCAGAAATCACTGATCACCTATCAACGTGTTCTTaGAAACTCAAAGCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: QSGNSSPSPWPIPEITDHLSTCS*KLKAQG
Trigger: GCCCTGAGCTTTGAGTTTCAAAGAACACGTTGATAG...GTGATCAGTGATTTCTGGTATTGGCCAGGGGGATGGGGAAGAGTTCCCACTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp CACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCCCTTCTTCTTGGAACAGGGTaGTTAACTCAGATGGTCCCA +
Preference number: 5 (lower is better)
Translates to: HAIWDWVCFRIIQAKRALLLGTG*LTQMVP
Trigger: TGGGACCATCTGAGTTAACAACCCTGTTCCAAGAAG...AAGGGCCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCAGTGTGTGTGGTGTGTaGAGTAAACTGTGTTTTTGC +
Preference number: 5 (lower is better)
Translates to: RESHDGQVSKSEALCRHSSVCGV*SKLCFC
Trigger: GCAAAAACACAGTTTACTCAACACACCACACACACT...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp AGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAGCTTTCTACATGGTTCATaGCTAGAATGCACCAAACGG +
Preference number: 5 (lower is better)
Translates to: RESHDGQVSKSEALCRHSFLHGS*LECTKR
Trigger: CCGTTTGGTGCATTCTAGCAATGAACCATGTAGAAA...GCTGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CCA 90 bp CAACAAAGTTTAGCTGGAAAAGCCCAAGATGTGATGTTTGGATTCTaGGTCTGCCCCTTGGCTAAGTCTGTGTCCACGATCAGTTCAGTG +
Preference number: 5 (lower is better)
Translates to: QQSLAGKAQDVMFGF*VCPLAKSVSTISSV
Trigger: CACTGAACTGATCGTGGACACAGACTTAGCCAAGGGGCAGACCCAGAATCCAAACATCACATCTTGGGCTTTTCCAGCTAAACTTTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS-3UTR CAA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGACCTGACTTGATCCTCTaGTCCTTGGACATGTGCAAC +
Preference number: 5 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGPDLIL*SLDMCN
Trigger: GTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGG...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGGCAGCGCTATTCCTTTaGTCCACAGAAATCCTTCTG +
Preference number: 5 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGAALFL*STEILL
Trigger: CAGAAGGATTTCTGTGGACAAAAGGAATAGCGCTGC...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS GCA 90 bp GTACTGGACTGCTTCCCTGACTTGATCCTCTTGTCCTTGGACATGTaGAACCCATTGAATTCATCAATAAACTCCTCACAGTGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: VLDCFPDLILLSLDM*NPLNSSINSSQCKR
Trigger: CCTCTTGCACTGTGAGGAGTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 90 bp GTATGTAAAATGATGAGCAAATTGCGCGCTGCAGTCAAGTTTTTATaGACGCTAGTTACCATCCTCAGCTCCCTCAGGTGTCAGGGCATT +
Preference number: 5 (lower is better)
Translates to: VCKMMSKLRAAVKFL*TLVTILSSLRCQGI
Trigger: AATGCCCTGACACCTGAGGGAGCTGAGGATGGTAACTAGCGTGCATAAAAACTTGACTGCAGCGCGCAATTTGCTCATCATTTTACATAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS-3UTR CAA 90 bp CCAGAGAGAGCCATGATGGCCAAGTCTCCAAGTCAGAGGCACTGTGTAGACACAAGAGATACAGTTGCATaGTTCAAAGTCTACTGTGAT +
Preference number: 5 (lower is better)
Translates to: PERAMMAKSPSQRHCVDTRDTVA*FKVYCD
Trigger: ATCACAGTAGACTTTGAACAATGCAACTGTATCTCT...TGTGTCTACACAGTGCCTCTGACTTGGAGACTTGGCCATCATGGCTCTCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CCA 90 bp TCTGCGGCCAACAAATATGACATGCTGATGACAACAAAGTTTAGCTaGAAAAGCCCAAGATGTGATGTTTGGATTCTGGGTCTGCCCCTT +
Preference number: 5 (lower is better)
Translates to: SAANKYDMLMTTKFS*KSPRCDVWILGLPL
Trigger: AAGGGGCAGACCCAGAATCCAAACATCACATCTTGGGCTTTTCCAGCTAAACTTTGTTGTCATCAGCATGTCATATTTGTTGGCCGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS-3UTR CAA 90 bp CATGAACTCTTAAAGGAGACACGCTTTCCAGGGAGGGAACCAAGGTCATCAGAATTGGAAAGCTCACATTaGCTTTCTCAAAGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: HELLKETRFPGREPRSSELESSH*LSQRRR
Trigger: TCTCCTCCTTTGAGAAAGCAAATGTGAGCTTTCCAA...TTCTGATGACCTTGGTTCCCTCCCTGGAAAGCGTGTCTCCTTTAAGAGTTCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGCAATCATTTTGCTCATaGGTCTGGAAATTCCCTAAG +
Preference number: 5 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGQSFCS*VWKFPK
Trigger: CTTAGGGAATTTCCAGACCAATGAGCAAAATGATTG...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGATTGCAAATCACTCAATaGGGTTTTAAGACCAAGCCC +
Preference number: 5 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGLQITQ*GFKTKP
Trigger: GGGCTTGGTCTTAAAACCCAATTGAGTGATTTGCAA...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp TTACAGCTGAGAACCGTTTTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACAGGTCATCTAAGGGTTTaGGAAAGCTCACATTTGCTT +
Preference number: 5 (lower is better)
Translates to: LQLRTVLHRGAALFLLSTGHLRV*ESSHLL
Trigger: AAGCAAATGTGAGCTTTCCAAAACCCTTAGATGACC...TGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp AACATCACGCAATTTGGGACTGGGTCTGTTTCAGGATCATTCAGGCTAAGAGGGAGCAGGAAATGCCATTaGTTCAGAACAAATGATGGA +
Preference number: 5 (lower is better)
Translates to: NITQFGTGSVSGSFRLRGSRKCH*FRTNDG
Trigger: TCCATCATTTGTTCTGAACAAATGGCATTTCCTGCT...CCCTCTTAGCCTGAATGATCCTGAAACAGACCCAGTCCCAAATTGCGTGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp GCCTTCCCTATGACCGTGTCTAAACCATGTTTACAGTATGAAGGTGTCTCTGGAACAAGTAGCCTAATTTaGCAAAGGTCTCGGTGGATT +
Preference number: 5 (lower is better)
Translates to: AFPMTVSKPCLQYEGVSGTSSLI*QRSRWI
Trigger: AATCCACCGAGACCTTTGCAAAATTAGGCTACTTGT...TCCAGAGACACCTTCATACTGTAAACATGGTTTAGACACGGTCATAGGGAAGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp AAGATTGGTCGTCCTCTGACACCCGATCTAAATACAACCAGAGAGAGCCATGATACATTCACCCATATCTaGCTCTCCAACATGATCATT +
Preference number: 5 (lower is better)
Translates to: KIGRPLTPDLNTTRESHDTFTHI*LSNMII
Trigger: AATGATCATGTTGGAGAGCAAGATATGGGTGAATGT...ATCATGGCTCTCTCTGGTTGTATTTAGATCGGGTGTCAGAGGACGACCAATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS-3UTR CAA 90 bp TTACAGCTGAGAACCGTTTTACACAGAGGTGCAGCGCTATTCCTTTTGTCCACATCTCATTCCTGGTCATaGCTCCCTATGTACATAAAA +
Preference number: 5 (lower is better)
Translates to: LQLRTVLHRGAALFLLSTSHSWS*LPMYIK
Trigger: TTTTATGTACATAGGGAGCAATGACCAGGAATGAGA...TGTGGACAAAAGGAATAGCGCTGCACCTCTGTGTAAAACGGTTCTCAGCTGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS-3UTR CAA 90 bp ACAACCAGAGGTCTGGTATTTTCCATCCCAAATCTATTTGCTGTAAGTTACCTGGTACAATATCTGGGTTaGCAAATCACTCAATTGGGT +
Preference number: 5 (lower is better)
Translates to: TTRGLVFSIPNLFAVSYLVQYLG*QITQLG
Trigger: ACCCAATTGAGTGATTTGCAAACCCAGATATTGTAC...CAGGTAACTTACAGCAAATAGATTTGGGATGGAAAATACCAGACCTCTGGTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CCA 72 bp GCCTATGCGCAGAATCAGAGCGGGCGGCGGCGGGGCTaGCGTAACCGGCAGCAGCGGCGGCGGCGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: AYAQNQSGRRRG*RNRQQRRRRRR
Trigger: CCGCCGCCGCCGCCGCCGCTGCTGCCGGTTACGCCAGCCCCGCCGCCGCCCGCTCTGATTCTGCGCATAGGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS GCA 72 bp CCAGGCTGCGGAACTTGGCTCGCCGGTGTGCGCGTCTaGTCGCTCGCGCCCTCCGTGCGTGTGCGCGCGGGG +
Preference number: 6 (lower is better)
Translates to: PGCGTWLAGVRV*SLAPSVRVRAG
Trigger: CCCCGCGCGCACACGCACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 72 bp AAGCCATGCCAGGCTGCGGAACTTGGCTCGCCGGTGTaGGCGTCTGCTCGCTCGCGCCCTCCGTGCGTGTGC +
Preference number: 6 (lower is better)
Translates to: KPCQAAELGSPV*ASARSRPPCVC
Trigger: GCACACGCACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp GTAAAGGTCCCCAGAAGCCATGCCAGGCTGCGGAACTaGGCTCGCCGGTGTGCGCGTCTGCTCGCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: VKVPRSHARLRN*ARRCARLLARA
Trigger: GGCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACCTTTAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp TTCAACCTCGTAAAGGTCCCCAGAAGCCATGCCAGGCTGCGGAACTaGGCTCGCCGGTGTGCGCGTCTGCTCGCTCGCGCCCTCCGTGCG +
Preference number: 6 (lower is better)
Translates to: FNLVKVPRSHARLRN*ARRCARLLARALRA
Trigger: CGCACGGAGGGCGCGAGCGAGCAGACGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACCTTTACGAGGTTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp AAGACCTGCGACACCAGCCCCCTGCTGCAGGCCTCCTaGGCGGTGAGCTTCCGCCCACAGAACAGCATCTCA +
Preference number: 6 (lower is better)
Translates to: KTCDTSPLLQAS*AVSFRPQNSIS
Trigger: TGAGATGCTGTTCTGTGGGCGGAAGCTCACCGCCCAGGAGGCCTGCAGCAGGGGGCTGGTGTCGCAGGTCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp AGGCCGCTGCAGAACACGCTCCCCACTGCGCTGAGGAGCAGCAGTTaGCTGTCGTCTGTGGCTGCGTTGCAGAGCGCTCGCCGGACTTCT +
Preference number: 6 (lower is better)
Translates to: RPLQNTLPTALRSSS*LSSVAALQSARRTS
Trigger: AGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp CAGAACACGCTCCCCACTGCGCTGAGGAGCAGCAGTTaGCTGTCGTCTGTGGCTGCGTTGCAGAGCGCTCGC +
Preference number: 6 (lower is better)
Translates to: QNTLPTALRSSS*LSSVAALQSAR
Trigger: GCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 72 bp AATCCAGGCCGCTGCAGAACACGCTCCCCACTGCGCTaGGGAGCAGCAGTTTGCTGTCGTCTGTGGCTGCGT +
Preference number: 6 (lower is better)
Translates to: NPGRCRTRSPLR*GAAVCCRLWLR
Trigger: ACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp CAGGATGCCATCTCCTTGACCCGCAGCATGACCTCCTaGCTGAACGTGGTGGGCCAGAAGACCTGCGACACC +
Preference number: 6 (lower is better)
Translates to: QDAISLTRSMTS*LNVVGQKTCDT
Trigger: GGTGTCGCAGGTCTTCTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 72 bp CAATCCTTTCAACCTCGTAAAGGTCCCCAGAAGCCATaGCAGGCTGCGGAACTTGGCTCGCCGGTGTGCGCG +
Preference number: 6 (lower is better)
Translates to: QSFQPRKGPQKP*QAAELGSPVCA
Trigger: CGCGCACACCGGCGAGCCAAGTTCCGCAGCCTGGCATGGCTTCTGGGGACCTTTACGAGGTTGAAAGGATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 72 bp GGAATAATCCAGGCCGCTGCAGAACACGCTCCCCACTaGGCTGAGGAGCAGCAGTTTGCTGTCGTCTGTGGC +
Preference number: 6 (lower is better)
Translates to: GIIQAAAEHAPH*AEEQQFAVVCG
Trigger: GCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGGGAGCGTGTTCTGCAGCGGCCTGGATTATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp TCCTCTTCACTGGACTGTGCAGGTTCAATCCCCCGTTaGTCAGAGCAGAGCCACCGAGCCCGTTCTCCGCCA +
Preference number: 6 (lower is better)
Translates to: SSSLDCAGSIPR*SEQSHRARSPP
Trigger: TGGCGGAGAACGGGCTCGGTGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS CCA 72 bp TCCTCTTCACTGGACTGTGCAGGTTCAATCCCCCGTTaGTCAGAGCAGAGCCGAGCCCGTTCTCCGCCAGTG +
Preference number: 6 (lower is better)
Translates to: SSSLDCAGSIPR*SEQSRARSPPV
Trigger: CACTGGCGGAGAACGGGCTCGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CAA 72 bp TTCCTCTTCACTGGACTGTGCAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCCACCGAGCCCGTTCTCCGCC +
Preference number: 6 (lower is better)
Translates to: FLFTGLCRFNPP*VRAEPPSPFSA
Trigger: GGCGGAGAACGGGCTCGGTGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS CAA 90 bp CCCACTGCGCTGAGGAGCAGCAGTTTGCTGTCGTCTGTGGCTGCGTaGCAGAGCGCTCGCCGGACTTCTTTCATGATCTCAGGTGTCAGG +
Preference number: 6 (lower is better)
Translates to: PTALRSSSLLSSVAA*QSARRTSFMISGVR
Trigger: CCTGACACCTGAGATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp TCCTCTAACACCACGGCACTGCAGGATGCCATCTCCTaGACCCGCAGCATGACCTCCTGGCTGAACGTGGTG +
Preference number: 6 (lower is better)
Translates to: SSNTTALQDAIS*TRSMTSWLNVV
Trigger: CACCACGTTCAGCCAGGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTGCAGTGCCGTGGTGTTAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp TTCCTCTTCACTGGACTGTGCAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCCGAGCCCGTTCTCCGCCAGT +
Preference number: 6 (lower is better)
Translates to: FLFTGLCRFNPP*VRAEPSPFSAS
Trigger: ACTGGCGGAGAACGGGCTCGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CAA 90 bp CATTTGGACTCCTCTAACACCACGGCACTGCAGGATGCCATCTCCTaGACCCGCAGCATGACCTCCTGGCTGAACGTGGTGGGCCAGAAG +
Preference number: 6 (lower is better)
Translates to: HLDSSNTTALQDAIS*TRSMTSWLNVVGQK
Trigger: CTTCTGGCCCACCACGTTCAGCCAGGAGGTCATGCTGCGGGTCAAGGAGATGGCATCCTGCAGTGCCGTGGTGTTAGAGGAGTCCAAATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 72 bp TGCGCTGAGGAGCAGCAGTTTGCTGTCGTCTGTGGCTaGGTTGCAGAGCGCTCGCCGGACTTCTTTCATGAT +
Preference number: 6 (lower is better)
Translates to: CAEEQQFAVVCG*VAERSPDFFHD
Trigger: ATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAGCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 72 bp TCCTTCTCCGCTTCCAGCTTCCTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTGGTCAGAGCAGAGCCG +
Preference number: 6 (lower is better)
Translates to: SFSASSFLFTGL*RFNPPLVRAEP
Trigger: CGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTGGAAGCGGAGAAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS CAA 72 bp TTCTCAACCGACGGGCCTCGACTGTCACGCAGCAGCTaGGAGGTACTGGACTGCTTCCCTGACTTGATCCTC +
Preference number: 6 (lower is better)
Translates to: FSTDGPRLSRSS*EVLDCFPDLIL
Trigger: GAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACAGTCGAGGCCCGTCGGTTGAGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp TGGGACAGTTTCTCAACCGACGGGCCTCGACTGTCACGCAGCAGCTaGGAGGTACTGGACTGCTTCCCTGACTTGATCCTCTTGTCCTTG +
Preference number: 6 (lower is better)
Translates to: WDSFSTDGPRLSRSS*EVLDCFPDLILLSL
Trigger: CAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp TGCGCGTGTGTGTGCGCGCGTGTGTGTGCGAGTGTGTGTGGTGTGTaGAGTAAACTGTGTTTTTGCAGAATGACAGGCTTGGGGGCTGCC +
Preference number: 6 (lower is better)
Translates to: CACVCARVCASVCGV*SKLCFCRMTGLGAA
Trigger: GGCAGCCCCCAAGCCTGTCATTCTGCAAAAACACAGTTTACTCAACACACCACACACACTCGCACACACACGCGCGCACACACACGCGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS TCA 72 bp CCGTTTATGGGAGGTCCCCTTGCTCTTTCCAGGATCTaGAGGTCTGTGGGACAGTTTCTCAACCGACGGGCC +
Preference number: 6 (lower is better)
Translates to: PFMGGPLALSRI*RSVGQFLNRRA
Trigger: GGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 72 bp GCAGAGCCACCGAGCCCGTTCTCCGCCAGTGTAGCGTaGTTCACGTCACATTCACCCATATCTTGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: AEPPSPFSASVA*FTSHSPISCSP
Trigger: TGGAGAGCAAGATATGGGTGAATGTGACGTGAATCACGCTACACTGGCGGAGAACGGGCTCGGTGGCTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS TCA 72 bp GCTCCCTCAGGTGTCAGGGCATTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGCGTGAACCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: APSGVRALLSEV*LDSRMCVNPSS
Trigger: GGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACAATGCCCTGACACCTGAGGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS GCA 72 bp TCCTTCTCCGCTTCCAGCTTCCTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTGGTCAGAGCAGAGCCA +
Preference number: 6 (lower is better)
Translates to: SFSASSFLFTGL*RFNPPLVRAEP
Trigger: TGGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTGGAAGCGGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
CDS GCA 72 bp TCCTTCTCCGCTTCCAGCTTCCTCTTCACTGGACTGTaGAGGTTCAATCCCCCGTTGGTCAGAGCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: SFSASSFLFTGL*RFNPPLVRAEQ
Trigger: CTGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGAAGCTGGAAGCGGAGAAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000561616.2
CDS CCA 72 bp GAGGTCCCCTTGCTCTTTCCAGGATCTGAAGGTCTGTaGGACAGTTTCTCAACCGACGGGCCTCGACTGTCA +
Preference number: 6 (lower is better)
Translates to: EVPLLFPGSEGL*DSFSTDGPRLS
Trigger: TGACAGTCGAGGCCCGTCGGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAGGGGACCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp CCAGCACTGATTTCAGGAAGCTCCGCACGAGGCATTTaGACTCCTCTAACACCACGGCACTGCAGGATGCCA +
Preference number: 6 (lower is better)
Translates to: PALISGSSARGI*TPLTPRHCRMP
Trigger: TGGCATCCTGCAGTGCCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAGCTTCCTGAAATCAGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp CTGAGGAGCAGCAGTTTGCTGTCGTCTGTGGCTGCGTaGCAGAGCGCTCGCCGGACTTCTTTCATGATCTCA +
Preference number: 6 (lower is better)
Translates to: LRSSSLLSSVAA*QSARRTSFMIS
Trigger: TGAGATCATGAAAGAAGTCCGGCGAGCGCTCTGCAACGCAGCCACAGACGACAGCAAACTGCTGCTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp TCCAGCACTGATTTCAGGAAGCTCCGCACGAGGCATTaGGACTCCTCTAACACCACGGCACTGCAGGATGCC +
Preference number: 6 (lower is better)
Translates to: SSTDFRKLRTRH*DSSNTTALQDA
Trigger: GGCATCCTGCAGTGCCGTGGTGTTAGAGGAGTCCAAATGCCTCGTGCGGAGCTTCCTGAAATCAGTGCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 72 bp GTCACGCAGCAGCTTGGAGGTACTGGACTGCTTCCCTaGCTTGATCCTCTTGTCCTTGGACATGTGCAACCC +
Preference number: 6 (lower is better)
Translates to: VTQQLGGTGLLP*LDPLVLGHVQP
Trigger: GGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 72 bp AGAGCAGAGCCGAGCCCGTTCTCCGCCAGTGTAGCGTaGTTCACGTCACATTCACCCATATCTTGCTCTCCA +
Preference number: 6 (lower is better)
Translates to: RAEPSPFSASVA*FTSHSPISCSP
Trigger: TGGAGAGCAAGATATGGGTGAATGTGACGTGAATCACGCTACACTGGCGGAGAACGGGCTCGGCTCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000570137.7
CDS GCA 72 bp CCTCGACTGTCACGCAGCAGCTTGGAGGTACTGGACTaGTTCCCTGACTTGATCCTCTTGTCCTTGGACATG +
Preference number: 6 (lower is better)
Translates to: PRLSRSSLEVLD*FPDLILLSLDM
Trigger: CATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACAGTCGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp GGCTTGGCCAGGGGAGGGTTAATTCGCTTCCGTTTATaGGAGGTCCCCTTGCTCTTTCCAGGATCTGAAGGT +
Preference number: 6 (lower is better)
Translates to: GLARGGLIRFRL*EVPLLFPGSEG
Trigger: ACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAATTAACCCTCCCCTGGCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp CTTCTGCAATCCGAGTGCTCTCCTTTCGCCGGTCGCTaGACAACCGGCCAATTAGGTAGGAATAATCCAGGC +
Preference number: 6 (lower is better)
Translates to: LLQSECSPFAGR*TTGQLGRNNPG
Trigger: GCCTGGATTATTCCTACCTAATTGGCCGGTTGTCCAGCGACCGGCGAAAGGAGAGCACTCGGATTGCAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp CGCAGCAGCTTGGAGGTACTGGACTGCTTCCCTGACTaGATCCTCTTGTCCTTGGACATGTGCAACCCATTG +
Preference number: 6 (lower is better)
Translates to: RSSLEVLDCFPD*ILLSLDMCNPL
Trigger: CAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp TTGGCCAGGGGAGGGTTAATTCGCTTCCGTTTATGGGAGGTCCCCTaGCTCTTTCCAGGATCTGAAGGTCTGTGGGACAGTTTCTCAACC +
Preference number: 6 (lower is better)
Translates to: LARGGLIRFRLWEVP*LFPGSEGLWDSFST
Trigger: GGTTGAGAAACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAATTAACCCTCCCCTGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp GCTGGAAAAGCCCAAGATGTGATGTTTGGATTCTGGGTCTGCCCCTaGGCTAAGTCTGTGTCCACGATCAGTTCAGTGAGTCCCTCTCCC +
Preference number: 6 (lower is better)
Translates to: AGKAQDVMFGFWVCP*AKSVSTISSVSPSP
Trigger: GGGAGAGGGACTCACTGAACTGATCGTGGACACAGACTTAGCCAAGGGGCAGACCCAGAATCCAAACATCACATCTTGGGCTTTTCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS TCA 72 bp TGTTATCCGAGGTCTGACTGGACAGCAGGATGTGCGTaGACCCTTCTTCCTTCCGCACAACGATGTCTCGAA +
Preference number: 6 (lower is better)
Translates to: CYPRSDWTAGCA*TLLPSAQRCLE
Trigger: TTCGAGACATCGTTGTGCGGAAGGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000567924.1
ENST00000570137.7
CDS TCA 72 bp ATGATCTCAGGTGTCAGGGCATTGTTATCCGAGGTCTaGCTGGACAGCAGGATGTGCGTGAACCCTTCTTCC +
Preference number: 6 (lower is better)
Translates to: MISGVRALLSEV*LDSRMCVNPSS
Trigger: GGAAGAAGGGTTCACGCACATCCTGCTGTCCAGTCAGACCTCGGATAACAATGCCCTGACACCTGAGATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 72 bp CATGAGGCATTCCTTCTCGTTCACGTCTTCCAGCACTaGTTTCAGGAAGCTCCGCACGAGGCATTTGGACTC +
Preference number: 6 (lower is better)
Translates to: HEAFLLVHVFQH*FQEAPHEAFGL
Trigger: GAGTCCAAATGCCTCGTGCGGAGCTTCCTGAAATCAGTGCTGGAAGACGTGAACGAGAAGGAATGCCTCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS TCA 72 bp GCCCCTTGGCTAAGTCTGTGTCCACGATCAGTTCAGTaGGTCCCTCTCCCCATGGTCTTCATCCATAAGATG +
Preference number: 6 (lower is better)
Translates to: APWLSLCPRSVQ*VPLPMVFIHKM
Trigger: CATCTTATGGATGAAGACCATGGGGAGAGGGACTCACTGAACTGATCGTGGACACAGACTTAGCCAAGGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS GCA 72 bp AAAAGGGAGTCAAGGCCTTTGGAGGAGCTCCAGAGCTaGTTGAGCATGAGGCATTCCTTCTCGTTCACGTCT +
Preference number: 6 (lower is better)
Translates to: KRESRPLEELQS*LSMRHSFSFTS
Trigger: AGACGTGAACGAGAAGGAATGCCTCATGCTCAAGCAGCTCTGGAGCTCCTCCAAAGGCCTTGACTCCCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp GGAGGGTTAATTCGCTTCCGTTTATGGGAGGTCCCCTaGCTCTTTCCAGGATCTGAAGGTCTGTGGGACAGT +
Preference number: 6 (lower is better)
Translates to: GGLIRFRLWEVP*LFPGSEGLWDS
Trigger: ACTGTCCCACAGACCTTCAGATCCTGGAAAGAGCAAGGGGACCTCCCATAAACGGAAGCGAATTAACCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp TTCCTCTTCACTGGACTGTGCAGGTTCAATCCCCCGTaGGTCAGAGCAGAGCAGGACCCGGTTTTAACTTCA +
Preference number: 6 (lower is better)
Translates to: FLFTGLCRFNPP*VRAEQDPVLTS
Trigger: TGAAGTTAAAACCGGGTCCTGCTCTGCTCTGACCAACGGGGGATTGAACCTGCACAGTCCAGTGAAGAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000561616.2
CDS CAA 90 bp CGACTGTCACGCAGCAGCTTGGAGGTACTGGACTGCTTCCCTGACTaGATCCTCTTGTCCTTGGACATGTGCAACCCATTGAATTCATCA +
Preference number: 6 (lower is better)
Translates to: RLSRSSLEVLDCFPD*ILLSLDMCNPLNSS
Trigger: TGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCGTGACAGTCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp GCCCAAGATGTGATGTTTGGATTCTGGGTCTGCCCCTaGGCTAAGTCTGTGTCCACGATCAGTTCAGTGAGT +
Preference number: 6 (lower is better)
Translates to: AQDVMFGFWVCP*AKSVSTISSVS
Trigger: ACTCACTGAACTGATCGTGGACACAGACTTAGCCAAGGGGCAGACCCAGAATCCAAACATCACATCTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS TCA 72 bp CCCCTCAGACTTCATAAATTTTGTCCTGCAGGTAGCTaGAAAGGGAGTCAAGGCCTTTGGAGGAGCTCCAGA +
Preference number: 6 (lower is better)
Translates to: PLRLHKFCPAGS*KGSQGLWRSSR
Trigger: TCTGGAGCTCCTCCAAAGGCCTTGACTCCCTTTTCAGCTACCTGCAGGACAAAATTTATGAAGTCTGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS GCA 72 bp GGAAAAGCCCAAGATGTGATGTTTGGATTCTGGGTCTaGCCCTTGGCTAAGTCTGTGTCCACGATCAGTTCA +
Preference number: 6 (lower is better)
Translates to: GKAQDVMFGFWV*PLAKSVSTISS
Trigger: TGAACTGATCGTGGACACAGACTTAGCCAAGGGGCAGACCCAGAATCCAAACATCACATCTTGGGCTTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS CCA 72 bp GGCCCATTGATGGCCACCACGATAGGCTTCTTAAACTaGATAAAGGCCTTCACAAAGTCCCTGATGGCTTCT +
Preference number: 6 (lower is better)
Translates to: GPLMATTIGFLN*IKAFTKSLMAS
Trigger: AGAAGCCATCAGGGACTTTGTGAAGGCCTTTATCCAGTTTAAGAAGCCTATCGTGGTGGCCATCAATGGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp TCTTCCTTCCGCACAACGATGTCTCGAAACCGACAGTaGCTTTCATTCTGGCGGACACTGTATCTGAGCCTT +
Preference number: 6 (lower is better)
Translates to: SSFRTTMSRNRQ*LSFWRTLYLSL
Trigger: AAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGACATCGTTGTGCGGAAGGAAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000567924.1
ENST00000570137.7
CDS CAA 90 bp CGCAGCAGCTTGGAGGTACTGGACTGCTTCCCTGACTTGATCCTCTaGTCCTTGGACATGTGCAACCCATTGAATTCATCAATAAACTCC +
Preference number: 6 (lower is better)
Translates to: RSSLEVLDCFPDLIL*SLDMCNPLNSSINS
Trigger: GGAGTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCTGCTGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp GTTCTCCGCCAGTGTAGCGTGATTCACGTCACATTCACCCATATCTaGCTCTCCAACATGATCATTCAAATCCAAGCCAGGCTGATGGGA +
Preference number: 6 (lower is better)
Translates to: VLRQCSVIHVTFTHI*LSNMIIQIQARLMG
Trigger: TCCCATCAGCCTGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGATATGGGTGAATGTGACGTGAATCACGCTACACTGGCGGAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 90 bp GTGAACCCTTCTTCCTTCCGCACAACGATGTCTCGAAACCGACAGTaGCTTTCATTCTGGCGGACACTGTATCTGAGCCTTTTGTCAAAG +
Preference number: 6 (lower is better)
Translates to: VNPSSFRTTMSRNRQ*LSFWRTLYLSLLSK
Trigger: CTTTGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGACATCGTTGTGCGGAAGGAAGAAGGGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000567924.1
ENST00000570137.7
CDS TCA 72 bp ACCGACAGTTGCTTTCATTCTGGCGGACACTGTATCTaGGCCTTTTGTCAAAGACGTAGTCCTTCTCCGCTT +
Preference number: 6 (lower is better)
Translates to: TDSCFHSGGHCI*AFCQRRSPSPL
Trigger: AAGCGGAGAAGGACTACGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTGTCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000567924.1
ENST00000570137.7
CDS GCA 72 bp ATGATGAGCAAATTGCGCGCTGCAGTCAAGTTTTTATaGACGCTAGTTACCATCCTCAGCTCCCTCAGGTGT +
Preference number: 6 (lower is better)
Translates to: MMSKLRAAVKFL*TLVTILSSLRC
Trigger: ACACCTGAGGGAGCTGAGGATGGTAACTAGCGTGCATAAAAACTTGACTGCAGCGCGCAATTTGCTCATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567924.1
CDS CAA 90 bp AGCTTGGAGGTACTGGACTGCTTCCCTGACTTGATCCTCTTGTCCTaGGACATGTGCAACCCATTGAATTCATCAATAAACTCCTCACAG +
Preference number: 6 (lower is better)
Translates to: SLEVLDCFPDLILLS*DMCNPLNSSINSSQ
Trigger: CTGTGAGGAGTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CCA 72 bp ACAACGATGTCTCGAAACCGACAGTTGCTTTCATTCTaGCGGACACTGTATCTGAGCCTTTTGTCAAAGACG +
Preference number: 6 (lower is better)
Translates to: TTMSRNRQLLSF*RTLYLSLLSKT
Trigger: CGTCTTTGACAAAAGGCTCAGATACAGTGTCCGCCAGAATGAAAGCAACTGTCGGTTTCGAGACATCGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000561616.2
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000567924.1
ENST00000570137.7
CDS CAA 72 bp TTGGAGGTACTGGACTGCTTCCCTGACTTGATCCTCTaGTCCTTGGACATGTGCAACCCATTGAATTCATCA +
Preference number: 6 (lower is better)
Translates to: LEVLDCFPDLIL*SLDMCNPLNSS
Trigger: TGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTACCTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp CAGTGTAGCGTGATTCACGTCACATTCACCCATATCTaGCTCTCCAACATGATCATTCAAATCCAAGCCAGG +
Preference number: 6 (lower is better)
Translates to: QCSVIHVTFTHI*LSNMIIQIQAR
Trigger: CCTGGCTTGGATTTGAATGATCATGTTGGAGAGCAAGATATGGGTGAATGTGACGTGAATCACGCTACACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp GACTTGATCCTCTTGTCCTTGGACATGTGCAACCCATaGAATTCATCAATAAACTCCTCACAGTGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: DLILLSLDMCNP*NSSINSSQCKR
Trigger: CCTCTTGCACTGTGAGGAGTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7
CDS CAA 72 bp GTACTGGACTGCTTCCCTGACTTGATCCTCTTGTCCTaGGACATGTGCAACCCATTGAATTCATCAATAAAC +
Preference number: 6 (lower is better)
Translates to: VLDCFPDLILLS*DMCNPLNSSIN
Trigger: GTTTATTGATGAATTCAATGGGTTGCACATGTCCAAGGACAAGAGGATCAAGTCAGGGAAGCAGTCCAGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000562753.1
ENST00000562812.5
ENST00000563890.5
ENST00000566173.3
ENST00000570137.7