Pregenerated sensors for CDX2 (Homo sapiens)
Ensembl gene IDs: ENSG00000165556Ensembl transcript IDs: ENST00000381020.8, ENST00000548877.1
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAGAGGTGCTGCAGAGGGTCTATACCTCTTGCTGTTTCCCGGCTCTaGTCATCTTCCCCAACTGCCCTTAAGGCGCCTCCGTGGGCGCGC | + |
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Preference number: 1 (lower is better) Translates to: ERCCRGSIPLAVSRL*SSSPTALKAPPWAR Trigger: GCGCGCCCACGGAGGCGCCTTAAGGGCAGTTGGGGAAGATGAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR GCA 90 bp | CCCTTGAGTCCCTCTCTCCCCTCGGCTCTAGCCAGAGGTGCAGCCTaGAGATCTAGGAAGAGAAGAGCTGGGGAGGAGGATGAAGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: PLSPSLPSALARGAA*RSRKRRAGEEDEGL Trigger: CAGGCCTTCATCCTCCTCCCCAGCTCTTCTCTTCCTAGATCTGCAGGCTGCACCTCTGGCTAGAGCCGAGGGGAGAGAGGGACTCAAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR GCA 90 bp | CTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTaGTGCAGAGGGTCTATACCTCTTGCTGTTTCCCGGCTCTGCTCA | + |
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Preference number: 1 (lower is better) Translates to: LELYTPPGRAAELER*CRGSIPLAVSRLCS Trigger: TGAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CCA 90 bp | TCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTaGAGAGGTGCTGCAGAGGGTCTATACCTCTTGCTGTTTCCCGGC | + |
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Preference number: 1 (lower is better) Translates to: SQSWSCIRHPEGPRN*RGAAEGLYLLLFPG Trigger: GCCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR TCA 90 bp | TGCTCATCTTCCCCAACTGCCCTTAAGGCGCCTCCGTGGGCGCGCTaGTTAGGCTCTCGGATGTTGGTGGGAAGATCGAAACGAAGGGCT | + |
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Preference number: 1 (lower is better) Translates to: CSSSPTALKAPPWAR*LGSRMLVGRSKRRA Trigger: AGCCCTTCGTTTCGATCTTCCCACCAACATCCGAGAGCCTAATCAGCGCGCCCACGGAGGCGCCTTAAGGGCAGTTGGGGAAGATGAGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR GCA 90 bp | GAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTGCTaGAGAGGGTCTATACCTCTTGCTGTTTCCCGGCTCTGCTCATCT | + |
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Preference number: 1 (lower is better) Translates to: ELYTPPGRAAELERC*RGSIPLAVSRLCSS Trigger: AGATGAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CCA 90 bp | AGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTaGTCAGGCCTGGAGTCCAATAACCACCCCCTCATACCACACCCT | + |
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Preference number: 1 (lower is better) Translates to: SSGDRLSKQVPVRAP*SGLESNNHPLIPHP Trigger: AGGGTGTGGTATGAGGGGGTGGTTATTGGACTCCAGGCCTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CCA 90 bp | ACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGGCCTaGAGTCCAATAACCACCCCCTCATACCACACCCTGTGCATACAC | + |
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Preference number: 1 (lower is better) Translates to: TGSLNKSLFGPPGQA*SPITTPSYHTLCIH Trigger: GTGTATGCACAGGGTGTGGTATGAGGGGGTGGTTATTGGACTCCAGGCCTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR TCA 90 bp | CTGGTTGGTGTGGTCAGTCCAGGCAATGCTTCTGCCAGTCCGGAATaGAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: LVGVVSPGNASASPE*SPAEAFCLLSGRKS Trigger: GCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCATTCCGGACTGGCAGAAGCATTGCCTGGACTGACCACACCAACCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR GCA 90 bp | CTGGGGGTTCTGCAGTCTTTGGTCAGTCCAGCTTTCTATCTTAGCTaGCTTTGGCTTCCGCAGTGTAAACCTTGCCTGCCCGGAGGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LGVLQSLVSPAFYLS*LWLPQCKPCLPGGR Trigger: CCTGCCTCCGGGCAGGCAAGGTTTACACTGCGGAAGCCAAAGGCAGCTAAGATAGAAAGCTGGACTGACCAAAGACTGCAGAACCCCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR GCA 90 bp | GGTCAGGCCTGGAGTCCAATAACCACCCCCTCATACCACACCCTGTaGATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: GQAWSPITTPSYHTL*IHQPSLSWSGKGRE Trigger: TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTGGTATGAGGGGGTGGTTATTGGACTCCAGGCCTGACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CCA 90 bp | GTTCTGCAGTCTTTGGTCAGTCCAGCTTTCTATCTTAGCTGCCTTTaGCTTCCGCAGTGTAAACCTTGCCTGCCCGGAGGCAGGAGGCCC | + |
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Preference number: 1 (lower is better) Translates to: VLQSLVSPAFYLSCL*LPQCKPCLPGGRRP Trigger: GGGCCTCCTGCCTCCGGGCAGGCAAGGTTTACACTGCGGAAGCCAAAGGCAGCTAAGATAGAAAGCTGGACTGACCAAAGACTGCAGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAGGCAGGAGGCCCAGCTaGACCTCCGAGGGCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIGRRPS*TSEGHE Trigger: CTCATGGCCCTCGGAGGTCCAGCTGGGCCTCCTGCC...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAGGCTCAGCCTGGAATTaGTCTGCCGCTGCAGAACCC | + |
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Preference number: 2 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIGSAWN*SAAAEP Trigger: GGGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCC...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAGCCACCTGGGGGTTCTaGAGTCTTTGGTCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIATWGF*SLWSVQ Trigger: CTGGACTGACCAAAGACTGCAGAACCCCCAGGTGGC...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAAGTCCACGCTCCTCATaGCTCAGCCTGGAATTGCTC | + |
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Preference number: 2 (lower is better) Translates to: RRPRAGPPEPLSQSWSCISPRSS*LSLELL Trigger: GAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACT...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAGCGGAATTGGAGAGGTaGTGCAGAGGGTCTATACCT | + |
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Preference number: 2 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIAELER*CRGSIP Trigger: AGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGC...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAAAGGCCTGGTTGGTGTaGTCAGTCCAGGCAATGCTT | + |
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Preference number: 2 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIKAWLV*SVQAML Trigger: AAGCATTGCCTGGACTGACCACACCAACCAGGCCTT...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGCCTCCGTGGGCGCGCTaGTTAGGCTCTCGGATGTTG | + |
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Preference number: 2 (lower is better) Translates to: FPILELYTPPGRAAELERPPWAR*LGSRML Trigger: CAACATCCGAGAGCCTAATCAGCGCGCCCACGGAGG...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGCCTGTTCGGGCCCCCTaGTCAGGCCTGGAGTCCAAT | + |
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Preference number: 2 (lower is better) Translates to: FPILELYTPPGRAAELERPVRAP*SGLESN Trigger: ATTGGACTCCAGGCCTGACCAGGGGGCCCGAACAGG...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGGCTGTTTCCCGGCTCTaGTCATCTTCCCCAACTGCC | + |
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Preference number: 2 (lower is better) Translates to: FPILELYTPPGRAAELERAVSRL*SSSPTA Trigger: GGCAGTTGGGGAAGATGAGCAGAGCCGGGAAACAGC...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CAA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATaGGAGAGGTGCTGCAGAGGGTCTATACCTCTTGCTGTTTCCCGG | + |
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Preference number: 2 (lower is better) Translates to: FPILELYTPPGRAAE*ERCCRGSIPLAVSR Trigger: CCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAACCGCAGTGTAAACCTTaGCTGCCCGGAGGCAGGAGG | + |
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Preference number: 2 (lower is better) Translates to: HTLCIHQPSLSWSGKGREPQCKP*LPGGRR Trigger: CCTCCTGCCTCCGGGCAGGCAAGGTTTACACTGCGG...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCGTAGGTCTATGGCTGTaGGTGGGAGGGGAGGGGTCT | + |
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Preference number: 2 (lower is better) Translates to: AIQMCILPKGTPRRATHSVGLWL*VGGEGS Trigger: AGACCCCTCCCCTCCCACCCACAGCCATAGACCTAC...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CAA 90 bp | GAAGGGCCGCGGAATTGGAGAGGTGCTGCAGAGGGTCTATACCTCTaGCTGTTTCCCGGCTCTGCTCATCTTCCCCAACTGCCCTTAAGG | + |
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Preference number: 2 (lower is better) Translates to: EGPRNWRGAAEGLYL*LFPGSAHLPQLPLR Trigger: CCTTAAGGGCAGTTGGGGAAGATGAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR TCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGGACCTCCGAGGGCCATaGGCAGGCAGCAGCCATCTT | + |
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Preference number: 2 (lower is better) Translates to: LSKQGLLTGVSRQRIATPDLRGP*AGSSHL Trigger: AAGATGGCTGCTGCCTGCTCATGGCCCTCGGAGGTC...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR TCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGTCTCCACTCCCTCTCTaGATTTTCCAAATCAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGSPLPL*IFQISL Trigger: CAAGCTGATTTGGAAAATTCAGAGAGGGAGTGGAGA...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGGGTCAGTCCAGGCAATaGTTCTGCCAGTCCGGAATG | + |
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Preference number: 2 (lower is better) Translates to: EALVTGSLNKSLFGPPGQGQSRQ*FCQSGM Trigger: CATTCCGGACTGGCAGAAGCATTGCCTGGACTGACC...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCAGTGTAAACCTTGCCTaGCCGGAGGCAGGAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: AKSLHVDLVRCYEGALSPSVNLA*PEAGGP Trigger: TGGGCCTCCTGCCTCCGGGCAGGCAAGGTTTACACT...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTTAGGAGGGAGTCACTaGAGAAGGGAACTGCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: FPILELYTPPGRAAELERLGGSH*RRELPA Trigger: AGCAGGCAGTTCCCTTCTGCAGTGACTCCCTCCTAA...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGAGGCAGCAGCCATCTTaGCCTCAAGCTTGCCTTTCC | + |
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Preference number: 2 (lower is better) Translates to: EALVTGSLNKSLFGPPGQRQQPS*PQACLS Trigger: GGAAAGGCAAGCTTGAGGCCAAGATGGCTGCTGCCT...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGAAGACGCAGGCCACCTaGGGGTTCTGCAGTCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRKTQAT*GFCSLW Trigger: CCAAAGACTGCAGAACCCCCAGGTGGCCTGCGTCTT...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCAGCCAAGCCTTTCCTaGTCTGGGAAGGGAAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: EALVTGSLNKSLFGPPGQQPSLS*SGKGRE Trigger: TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAAAGGAGGATGAAGGCCTaGTTGGTGTGGTCAGTCCAG | + |
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Preference number: 2 (lower is better) Translates to: HTLCIHQPSLSWSGKGRERRMKA*LVWSVQ Trigger: CTGGACTGACCACACCAACCAGGCCTTCATCCTCCT...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCAGCCTGGAATTGCTCTaGCGCTGCAGAACCCGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PIISDCWEAPGHSDVHFASLELL*RCRTRW Trigger: CCACCGGGTTCTGCAGCGGCAGAGCAATTCCAGGCT...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGTCTTGGCCTCAAGCTTaGCTTTCCCTTGAGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: LSKQGLLTGVSRQRIATPSWPQA*LSLESL Trigger: GAGGGACTCAAGGGAAAGGCAAGCTTGAGGCCAAGA...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCTCATACCACACCCTGTaGATACACCAGCCAAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: AKSLHVDLVRCYEGALSPSYHTL*IHQPSL Trigger: AAGGCTTGGCTGGTGTATGCACAGGGTGTGGTATGA...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCCCTCATGGCTCAGCCTaGAATTGCTCTGCCGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PIISDCWEAPGHSDVHFAPHGSA*NCSAAA Trigger: TGCAGCGGCAGAGCAATTCCAGGCTGAGCCATGAGG...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGAGGCTTCTGATGCTCTaGGGTAAAATGAGGCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRRLLML*GKMRLS Trigger: GGACAGCCTCATTTTACCCCAGAGCATCAGAAGCCT...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR TCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAAGGAGAGTATATTTCTTaGGGCCCCAAATCCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: HTLCIHQPSLSWSGKGREGEYIS*GPKSHL Trigger: CAAGTGGGATTTGGGGCCTCAAGAAATATACTCTCC...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCTATCTTAGCTGCCTTTaGCTTCCGCAGTGTAAACCT | + |
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Preference number: 2 (lower is better) Translates to: AIQMCILPKGTPRRATHSYLSCL*LPQCKP Trigger: AGGTTTACACTGCGGAAGCCAAAGGCAGCTAAGATA...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGCCAGAGGTGCAGCCTaGAGATCTAGGAAGAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PIISDCWEAPGHSDVHFAARGAA*RSRKRR Trigger: TCTTCTCTTCCTAGATCTGCAGGCTGCACCTCTGGC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR GCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGGCTTTCTATCTTAGCTaGCTTTGGCTTCCGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: LSKQGLLTGVSRQRIATPAFYLS*LWLPQC Trigger: ACACTGCGGAAGCCAAAGGCAGCTAAGATAGAAAGC...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR TCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCTGCTCTGGGGTAAAATaGGGCTGTCCAGATAATCTC | + |
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Preference number: 2 (lower is better) Translates to: PIISDCWEAPGHSDVHFACSGVK*GCPDNL Trigger: GAGATTATCTGGACAGCCTCATTTTACCCCAGAGCA...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGGGTTCTGCAGTCTTTaGTCAGTCCAGCTTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: PIISDCWEAPGHSDVHFAGFCSL*SVQLSI Trigger: GATAGAAAGCTGGACTGACCAAAGACTGCAGAACCC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CAA 90 bp | CTTCTTCATCAGCCCCAAGATTGTGAAAATGACAGGAAGTCCAGGTaGGCTCTGGCATTTATAGCACTGACATACATTCAGCCCAGAGAA | + |
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Preference number: 2 (lower is better) Translates to: LLHQPQDCENDRKSR*ALAFIALTYIQPRE Trigger: TTCTCTGGGCTGAATGTATGTCAGTGCTATAAATGCCAGAGCCAACCTGGACTTCCTGTCATTTTCACAATCTTGGGGCTGATGAAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| 3UTR CCA 72 bp | CCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTaGAGCTGTATACGCCACCCGGAAGGGCCGCGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PRAGPPEPLSQS*SCIRHPEGPRN Trigger: ATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGCAGGCAGCAGCCATCTaGGCCTCAAGCTTGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGQAAAI*ASSLPF Trigger: GAAAGGCAAGCTTGAGGCCAAGATGGCTGCTGCCTG...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | GCCATGAGCAGGCAGCAGCCATCTTGGCCTCAAGCTTaGCTTTCCCTTGAGTCCCTCTCTCCCCTCGGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: AMSRQQPSWPQA*LSLESLSPLGS Trigger: AGAGCCGAGGGGAGAGAGGGACTCAAGGGAAAGGCAAGCTTGAGGCCAAGATGGCTGCTGCCTGCTCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGGACAGGAAGTCCAGGTaGGCTCTGGCATTTATAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGDRKSR*ALAFIA Trigger: TGCTATAAATGCCAGAGCCAACCTGGACTTCCTGTC...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR TCA 72 bp | GTGGTCAGTCCAGGCAATGCTTCTGCCAGTCCGGAATaGAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: VVSPGNASASPE*SPAEAFCLLSG Trigger: GCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCATTCCGGACTGGCAGAAGCATTGCCTGGACTGACCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR TCA 72 bp | TCCCCAACTGCCCTTAAGGCGCCTCCGTGGGCGCGCTaGTTAGGCTCTCGGATGTTGGTGGGAAGATCGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SPTALKAPPWAR*LGSRMLVGRSK Trigger: TTTCGATCTTCCCACCAACATCCGAGAGCCTAATCAGCGCGCCCACGGAGGCGCCTTAAGGGCAGTTGGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | AGGCCTGGTTGGTGTGGTCAGTCCAGGCAATGCTTCTaGCAGTCCGGAATGAAGCCCAGCGGAGGCTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: RPGWCGQSRQCF*QSGMKPSGGFL Trigger: CAGAAAGCCTCCGCTGGGCTTCATTCCGGACTGGCAGAAGCATTGCCTGGACTGACCACACCAACCAGGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | TATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTaGTGCAGAGGGTCTATACCTCTTGCTGTTTCCCGG | + |
|
Preference number: 3 (lower is better) Translates to: YTPPGRAAELER*CRGSIPLAVSR Trigger: CCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR CCA 72 bp | CTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGGCCTaGAGTCCAATAACCACCCCCTCATACCACACCCTG | + |
|
Preference number: 3 (lower is better) Translates to: LNKSLFGPPGQA*SPITTPSYHTL Trigger: CAGGGTGTGGTATGAGGGGGTGGTTATTGGACTCCAGGCCTGACCAGGGGGCCCGAACAGGGACTTGTTTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR CCA 72 bp | TGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTaGAGAGGTGCTGCAGAGGGTCTATACCTCTTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WSCIRHPEGPRN*RGAAEGLYLLL Trigger: CAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAATGGCTCAGCCTGGAATaGCTCTGCCGCTGCAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: HTLCIHQPSLSWSGKGREWLSLE*LCRCRT Trigger: GGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCCA...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAGGATGAAGGCCTGGTaGGTGTGGTCAGTCCAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AIQMCILPKGTPRRATHSRMKAW*VWSVQA Trigger: TGCCTGGACTGACCACACCAACCAGGCCTTCATCCT...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | TGCAGAGGGTCTATACCTCTTGCTGTTTCCCGGCTCTaGTCATCTTCCCCAACTGCCCTTAAGGCGCCTCCG | + |
|
Preference number: 3 (lower is better) Translates to: CRGSIPLAVSRL*SSSPTALKAPP Trigger: CGGAGGCGCCTTAAGGGCAGTTGGGGAAGATGAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR CCA 72 bp | GACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTaGTCAGGCCTGGAGTCCAATAACCACCCCCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: DRLSKQVPVRAP*SGLESNNHPLI Trigger: TATGAGGGGGTGGTTATTGGACTCCAGGCCTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGGGCCCCAAATCCCACTaGTCTTACTCCTGGCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRGPKSH*SYSWLP Trigger: TGGGAGCCAGGAGTAAGACAAGTGGGATTTGGGGCC...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | TTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTaGATTTTGCCCAAAGGCACCCCCAGGAGAGCCACG | + |
|
Preference number: 3 (lower is better) Translates to: FLTAGKHLAIQM*ILPKGTPRRAT Trigger: CGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGGGGAGAGTATATTTCTaGAGGCCCCAAATCCCACTT | + |
|
Preference number: 3 (lower is better) Translates to: FPILELYTPPGRAAELERGRVYF*RPQIPL Trigger: AAGTGGGATTTGGGGCCTCAAGAAATATACTCTCCC...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | TGGAGTCCAATAACCACCCCCTCATACCACACCCTGTaGATACACCAGCCAAGCCTTTCCTGGTCTGGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: WSPITTPSYHTL*IHQPSLSWSGK Trigger: CTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTGGTATGAGGGGGTGGTTATTGGACTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR GCA 72 bp | GGAATTGGAGAGGTGCTGCAGAGGGTCTATACCTCTTaGTGTTTCCCGGCTCTGCTCATCTTCCCCAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: GIGEVLQRVYTS*CFPALLIFPNC Trigger: GCAGTTGGGGAAGATGAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGGAGGGTCTATACCTCTaGCTGTTTCCCGGCTCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LSKQGLLTGVSRQRIATPEGLYL*LFPGSA Trigger: AGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTC...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR CCA 72 bp | TCTTTGGTCAGTCCAGCTTTCTATCTTAGCTGCCTTTaGCTTCCGCAGTGTAAACCTTGCCTGCCCGGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLVSPAFYLSCL*LPQCKPCLPGG Trigger: GCCTCCGGGCAGGCAAGGTTTACACTGCGGAAGCCAAAGGCAGCTAAGATAGAAAGCTGGACTGACCAAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGGGGTTCTGCAGTCTTaGGTCAGTCCAGCTTTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: PIISDCWEAPGHSDVHFAGVLQS*VSPAFY Trigger: ATAGAAAGCTGGACTGACCAAAGACTGCAGAACCCC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCTTTAAAAACTCTGGCTaGGATGTTACACAGACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: AKSLHVDLVRCYEGALSPFKNSG*DVTQTN Trigger: GTTGGTCTGTGTAACATCCAAGCCAGAGTTTTTAAA...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAAGTGTAAACCTTGCCTaGCCGGAGGCAGGAGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPRAGPPEPLSQSWSCISVNLA*PEAGGP Trigger: TGGGCCTCCTGCCTCCGGGCAGGCAAGGTTTACACT...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGCCTCCGTGGGCGCGCTaGTTAGGCTCTCGGATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGPPWAR*LGSRML Trigger: CAACATCCGAGAGCCTAATCAGCGCGCCCACGGAGG...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGGGCTCAGACCGGCCCTaGCCCAGGACCCCTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERGSDRP*PRTPDP Trigger: TGGGTCAGGGGTCCTGGGTCAGGGCCGGTCTGAGCC...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGTCTGCGGCGCCAGGTTaGGGCCGCCAGAGTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQSAAPG*GRQSGA Trigger: TGCGCCACTCTGGCGGCCTCAACCTGGCGCCGCAGA...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTGCTCTCCACCGTTGAGGCCGTaGGCCACGGCGTTGGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: PEESSRVHAPHGSAWNCSPPLRP*ATALAA Trigger: CGCCGCCAACGCCGTGGCTCACGGCCTCAACGGTGG...AGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGCAAGTTCGCTGCCGCTaGAGCTGCGGCCGCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERQVRCR*SCGRHV Trigger: CACGTGGCGGCCGCAGCTGCAGCGGCAGCGAACTTG...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTGGCTGCCGAGGGACTaGTGCGCCGGCTTCCGCATC | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERWLPRD*CAGFRI Trigger: GATGCGGAAGCCGGCGCAGCAGTCCCTCGGCAGCCA...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGAGCTCACGTACATGGTaGCGAGGGTCCGGGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGSSRTW*RGSGSR Trigger: TCTGCTCCCGGACCCTCGCCACCATGTACGTGAGCT...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAACCGGGGAGCCACCGTTaGGGCCGTGAGCCACGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGREPGSHR*GREPRR Trigger: ACGCCGTGGCTCACGGCCTCAACGGTGGCTCCCCGG...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGGATGGCCCCGGGGACTaGGCGCTGTCCAAGTTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERDGPGD*ALSKFA Trigger: AGCGAACTTGGACAGCGCGCAGTCCCCGGGGCCATC...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAATGGGGCGCCATACGCTaGCGGCCAGGATGGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGREWGAIR*RPGWPR Trigger: CCGGGGCCATCCTGGCCGGCAGCGTATGGCGCCCCA...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAGTGGATTTGGTGAGATaGTATGAGGGGGCCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIVDLVR*YEGALS Trigger: TGAGAGGGCCCCCTCATAGCATCTCACCAAATCCAC...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGAGACCCGCCACAGGCTaGCGTGCGGAGCCCCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRRPATG*RAEPQA Trigger: GGCCTGGGGCTCCGCACGCCAGCCTGTGGCGGGTCT...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGCTGGGGAGGCTGTGGTaGCGGCGGAGGCGGCTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGLGRLW*RRRRLW Trigger: CCACAGCCGCCTCCGCCGCCACCACAGCCTCCCCAG...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGCCTCATGGCTCAGCCTaGAATTGCTCTGCCGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGPHGSA*NCSAAA Trigger: TGCAGCGGCAGAGCAATTCCAGGCTGAGCCATGAGG...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | CCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTGCTCTCAGGAGGGCCGGGGTTaGGCGTTTGCAGCAGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PEESSRVHAPHGSAWNCSQEGRG*AFAAAQ Trigger: CTGGGCTGCTGCAAACGCTCAACCCCGGCCCTCCTG...AGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGGACCTCCGAGGGCCATaGGCAGGCAGCAGCCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERDLRGP*AGSSHL Trigger: AAGATGGCTGCTGCCTGCTCATGGCCCTCGGAGGTC...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCCTGACCCAGGACCCCTaGCCCAGGACCCCTCGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPLTQDP*PRTPRP Trigger: TGGGCGAGGGGTCCTGGGTCAGGGGTCCTGGGTCAG...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGGGTAGTCTGCGGGGCTaGTGTAGCCCATGGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQGSLRG*CSPWLR Trigger: CCGCAGCCATGGGCTACAGCAGCCCCGCAGACTACC...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATACTGGCCATTCAGATGTaGATTTTGCCCAAAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: RRPRAGPPEPLSQSWSCILAIQM*ILPKGT Trigger: GGTGCCTTTGGGCAAAATGCACATCTGAATGGCCAG...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCCCCGCGGTGCTCCGCTaGCTCCTCGCGGCTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPPAVLR*LLAALL Trigger: CAGAAGAGCCGCGAGGAGCCAGCGGAGCACCGCGGG...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCCTCACCATGCTGCCTaGGGACCGACGCTGGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQPHHAA*GPTLEA Trigger: AGCCTCCAGCGTCGGTCCCCAGGCAGCATGGTGAGG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCCCAGTCCTCCCGGAGTaGGGCGCCATACGCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPPVLPE*GAIRCR Trigger: CCGGCAGCGTATGGCGCCCCACTCCGGGAGGACTGG...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGGGCTGCTGTAGCCCATaGCTGCGGCCGGGGAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRGCCSP*LRPGSH Trigger: GTGGCTCCCCGGCCGCAGCCATGGGCTACAGCAGCC...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCACAGGTTCCGCCGCTaGCCGCCGGGAGACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRHRFRR*PPGDSC Trigger: GCAGCTGTCTCCCGGCGGCCAGCGGCGGAACCTGTG...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCCGCACTCCTCCCTCTaGCTTCGAGGCCAGGCGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRPHSSL*LRGQAP Trigger: GGGCGCCTGGCCTCGAAGCCAGAGGGAGGAGTGCGG...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR TCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTCTGCCAGTCCGGAATaGAGCCCAGCGGAGGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERSASPE*SPAEAF Trigger: GAAAGCCTCCGCTGGGCTTCATTCCGGACTGGCAGA...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCAGACCTCACCATGCTaGCTGGGGACCGACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQQTSPC*LGTDAG Trigger: TCCAGCGTCGGTCCCCAGGCAGCATGGTGAGGTCTG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTGCTCTGGGCTGACGAAGTTCTaGGGCGCCAGGTTGAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: PEESSRVHAPHGSAWNCSGLTKF*GARLRP Trigger: CGGCCTCAACCTGGCGCCGCAGAACTTCGTCAGCCC...AGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGGCTGTCCAAGTTCGCTaGCGCTGCAGCTGCGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRAVQVR*RCSCGR Trigger: GCGGCCGCAGCTGCAGCGGCAGCGAACTTGGACAGC...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGGCTGTAGCCCATGGCTaGGGCCGGGGAGCCACCGTT | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRAVAHG*GRGATV Trigger: AACGGTGGCTCCCCGGCCGCAGCCATGGGCTACAGC...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAACTGCCGAGGGACTGCTaGGCCGGCTTCCGCATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGRELPRDC*AGFRIH Trigger: GTGGATGCGGAAGCCGGCGCAGCAGTCCCTCGGCAG...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGAGCCTGGAATTGCTCTaGCGCTGCAGAACCCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERSLELL*RCRTRW Trigger: CCACCGGGTTCTGCAGCGGCAGAGCAATTCCAGGCT...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGTCTTGGCCTCAAGCTTaGCTTTCCCTTGAGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGSWPQA*LSLESL Trigger: GAGGGACTCAAGGGAAAGGCAAGCTTGAGGCCAAGA...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCCAGGCACTGAGGCTTaGAGGGAAGACACCGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQPGTEA*REDTGL Trigger: GAGTCCGGTGTCTTCCCTGCAAGCCTCAGTGCCTGG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGCCCTCGCCCGGGTCCTaGCGGAAAGTTCAGCTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSKQGLLTGVSRQRIATPPSPGS*RKVQLG Trigger: GCCGAGCTGAACTTTCCGGCAGGACCCGGGCGAGGG...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCTTGAGGCCGCCAGAGTaGCGCACGGAGCTAGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AIQMCILPKGTPRRATHSLRPPE*RTELGY Trigger: GTACCCTAGCTCCGTGCGCCACTCTGGCGGCCTCAA...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGGTAGGTCTATGGCTGTaGGTGGGAGGGGAGGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQVGLWL*VGGEGS Trigger: AGACCCCTCCCCTCCCACCCACAGCCATAGACCTAC...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGGGCTGGGCTCAGGCTTaGGGGCAGGGAAGGTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGGWAQA*GQGRSQ Trigger: CTGAGACCTTCCCTGCCCCCAAGCCTGAGCCCAGCC...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAATAATTTCTGACTGCTaGGAAGCACCTGGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIIISDC*EAPGHS Trigger: TGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTAT...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCCGCTGCCGCTGCAGCTaGGGCCGCCACGTGGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFARCRCS*GRHVVT Trigger: GGTTACCACGTGGCGGCCGCAGCTGCAGCGGCAGCG...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGCCGGGGTTGAGCGTTTaGAGCAGCCCAGAAGCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGPGLSV*SSPEAQ Trigger: CTGCGCTTCTGGGCTGCTGCAAACGCTCAACCCCGG...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGGAATTGCTCTGCCGCTaGAGAACCCGGTGGGTCACT | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQELLCR*RTRWVT Trigger: AGTGACCCACCGGGTTCTGCAGCGGCAGAGCAATTC...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGCCGCAGTGTAAACCTTaGCTGCCCGGAGGCAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGPQCKP*LPGGRR Trigger: CCTCCTGCCTCCGGGCAGGCAAGGTTTACACTGCGG...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGGAATTGGAGAGGTGCTaGAGAGGGTCTATACCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGELERC*RGSIPL Trigger: AAGAGGTATAGACCCTCTGCAGCACCTCTCCAATTC...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTGCTCTACTTCTCAGAGGACCTaGCTGAGGCTGGGGAGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PEESSRVHAPHGSAWNCSTSQRT*LRLGRL Trigger: CAGCCTCCCCAGCCTCAGCCAGGTCCTCTGAGAAGT...AGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCCCCCCTGGTCAGGCCTaGAGTCCAATAACCACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPPPGQA*SPITTP Trigger: GGGGGTGGTTATTGGACTCCAGGCCTGACCAGGGGG...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 59% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCCTGTTCGGGCCCCCTaGTCAGGCCTGGAGTCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRPVRAP*SGLESN Trigger: ATTGGACTCCAGGCCTGACCAGGGGGCCCGAACAGG...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAACACGCATTCCAAGGCTaGGCTCAGGCTTGGGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGREHAFQG*AQAWGQ Trigger: CTGCCCCCAAGCCTGAGCCCAGCCTTGGAATGCGTG...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGTCCTTCCCACTAGGCTaGAGAGGCGGGGAAGACCCG | + |
|
Preference number: 4 (lower is better) Translates to: LSKQGLLTGVSRQRIATPSFPLG*RGGEDP Trigger: CGGGTCTTCCCCGCCTCTGCAGCCTAGTGGGAAGGA...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCTCCTCGCGGCTCTTCTaGCTCCGAGGCGGTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFASSRLF*LRGGPS Trigger: GGAGGGACCGCCTCGGAGGCAGAAGAGCCGCGAGGA...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAATGGTTTTCACTTGGCTaGCGAGGGACTGCTGCGCCG | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGREWFSLG*RGTAAP Trigger: CGGCGCAGCAGTCCCTCGGCAGCCAAGTGAAAACCA...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGGGCTCAGCCTGGAATTaGTCTGCCGCTGCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGGSAWN*SAAAEP Trigger: GGGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCC...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGTCCAGGCAATGCTTCTaGCAGTCCGGAATGAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQSRQCF*QSGMKP Trigger: GGGCTTCATTCCGGACTGGCAGAAGCATTGCCTGGA...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCGTCCTGGTTTTCACTTaGCTGCCGAGGGACTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AIQMCILPKGTPRRATHSVLVFT*LPRDCC Trigger: GCAGCAGTCCCTCGGCAGCCAAGTGAAAACCAGGAC...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGATTTGTCTTTCGTCCTaGTTTTCACTTGGCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGICLSS*FSLGCR Trigger: TCGGCAGCCAAGTGAAAACCAGGACGAAAGACAAAT...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGAACCCGGTGGGTCACTaGGTGACGGTGGGGTTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRNPVGH*VTVGFS Trigger: GCTAAACCCCACCGTCACCCAGTGACCCACCGGGTT...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGAGGAGGATGAAGGCCTaGTTGGTGTGGTCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQRRMKA*LVWSVQ Trigger: CTGGACTGACCACACCAACCAGGCCTTCATCCTCCT...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGGCAGGAGGCCCAGCTaGACCTCCGAGGGCCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFAGRRPS*TSEGHE Trigger: CTCATGGCCCTCGGAGGTCCAGCTGGGCCTCCTGCC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGGCCACCTGGGGGTTCTaGAGTCTTTGGTCAGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGATWGF*SLWSVQ Trigger: CTGGACTGACCAAAGACTGCAGAACCCCCAGGTGGC...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAAGCTGTTTCCCGGCTCTaGTCATCTTCCCCAACTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGREAVSRL*SSSPTA Trigger: GGCAGTTGGGGAAGATGAGCAGAGCCGGGAAACAGC...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGAGCTCCAGCCGCTGGTaGTCCGTGTACACCACTCGA | + |
|
Preference number: 4 (lower is better) Translates to: LSKQGLLTGVSRQRIATPSSSRW*SVYTTR Trigger: TCGAGTGGTGTACACGGACCACCAGCGGCTGGAGCT...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGAAGACGCAGGCCACCTaGGGGTTCTGCAGTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGKTQAT*GFCSLW Trigger: CCAAAGACTGCAGAACCCCCAGGTGGCCTGCGTCTT...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGAGGCTTCTGATGCTCTaGGGTAAAATGAGGCTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERRLLML*GKMRLS Trigger: GGACAGCCTCATTTTACCCCAGAGCATCAGAAGCCT...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCCCCCTTTCCCAATCCTaGAGCTGTATACGCCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPPLSQS*SCIRHP Trigger: CGGGTGGCGTATACAGCTCCAGGATTGGGAAAGGGG...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR TCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCTCCATGTGGATTTGGTaGGATGCTATGAGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPSMWIW*DAMRGP Trigger: GGGCCCCCTCATAGCATCTCACCAAATCCACATGGA...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGAGCAGACCTCACCATaGTGCCTGGGGACCGACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFAEQTSP*CLGTDA Trigger: AGCGTCGGTCCCCAGGCAGCATGGTGAGGTCTGCTC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGGTAGCTCACGTACATaGTGGCGAGGGTCCGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFAGSSRT*WRGSGS Trigger: GCTCCCGGACCCTCGCCACCATGTACGTGAGCTACC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGAGTCCACGCTCCTCATaGCTCAGCCTGGAATTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGSPRSS*LSLELL Trigger: GAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACT...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGGGGTTCTGCAGTCTTTaGTCAGTCCAGCTTTCTATC | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERGFCSL*SVQLSI Trigger: GATAGAAAGCTGGACTGACCAAAGACTGCAGAACCC...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR TCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGTGCTCTGGGGTAAAATaGGGCTGTCCAGATAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQCSGVK*GCPDNL Trigger: GAGATTATCTGGACAGCCTCATTTTACCCCAGAGCA...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGGGCTGCTGCTGCTGTTaGTGCTGCAACTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGGCCCC*CCNFFL Trigger: CAAGAAGAAGTTGCAGCAGCAACAGCAGCAGCAGCC...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGGCCAGAGGTGCAGCCTaGAGATCTAGGAAGAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGARGAA*RSRKRR Trigger: TCTTCTCTTCCTAGATCTGCAGGCTGCACCTCTGGC...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CACACCCTGTGCATACACCAGCCAAGCCTTTCCTGGTCTGGGAAGGGAAGAGAATTAGGAGGGAGTCACTaGAGAAGGGAACTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HTLCIHQPSLSWSGKGRELGGSH*RRELPA Trigger: AGCAGGCAGTTCCCTTCTGCAGTGACTCCCTCCTAA...TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTGGTGTATGCACAGGGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTATCTTAGCTGCCTTTaGCTTCCGCAGTGTAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERYLSCL*LPQCKP Trigger: AGGTTTACACTGCGGAAGCCAAAGGCAGCTAAGATA...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCCAGCCAAGCCTTTCCTaGTCTGGGAAGGGAAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPQPSLS*SGKGRE Trigger: TTCTCTTCCCTTCCCAGACCAGGAAAGGCTTGGCTG...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGTTAAAAACTCTGGCTTaGATGTTACACAGACCAACA | + |
|
Preference number: 4 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGLKTLA*MLHRPT Trigger: TGTTGGTCTGTGTAACATCCAAGCCAGAGTTTTTAA...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR TCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGCTTTCCTCCGGATGGTaGTGTAGCGACTGTAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGLSSGW*CSDCSE Trigger: TTCACTACAGTCGCTACATCACCATCCGGAGGAAAG...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR TCA 90 bp | CCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTGCTCTGGAGAGTATATTTCTTaGGGCCCCAAATCCCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: PEESSRVHAPHGSAWNCSGEYIS*GPKSHL Trigger: CAAGTGGGATTTGGGGCCTCAAGAAATATACTCTCC...AGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGAACCAGATTTTAACCTaGCTCTCAGAGAGCCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRNQILT*LSESPS Trigger: GCTGGGGCTCTCTGAGAGGCAGGTTAAAATCTGGTT...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGTCATACCACACCCTGTaGATACACCAGCCAAGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGSYHTL*IHQPSL Trigger: AAGGCTTGGCTGGTGTATGCACAGGGTGTGGTATGA...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGCAGAAGGGAACTGCCTaGTGTTTGCAAAAAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGQKGTA*CLQKAS Trigger: GGAGGCTTTTTGCAAACAGCAGGCAGTTCCCTTCTG...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGAAGGGCTCACGGAAATaGCCAGTGATTTACAGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQKGSRK*PVIYRR Trigger: TCTTCTGTAAATCACTGGGCATTTCCGTGAGCCCTT...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGAGGGTCTATACCTCTTaGTGTTTCCCGGCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKQGLLTGVSRQRIATPRVYTS*CFPALL Trigger: GAGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCT...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCCGGACTCAAGGGCTCTaGGACACTTCTCAGAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFARTQGL*DTSQRT Trigger: GGTCCTCTGAGAAGTGTCCCAGAGCCCTTGAGTCCG...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCCAGCCCGGTCCCCAGTaGATCGGCCAGATAACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFAQPGPQ*IGQITR Trigger: TCTTGTTATCTGGCCGATCCACTGGGGACCGGGCTG...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCTGTGGTGGCTGCTGCTaGTGTTGCTGCTGCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFACGGCC*CCCCNF Trigger: GAAGTTGCAGCAGCAACAGCAGCAGCAGCCACCACA...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCGCTTTCTATCTTAGCTaGCTTTGGCTTCCGCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPAFYLS*LWLPQC Trigger: ACACTGCGGAAGCCAAAGGCAGCTAAGATAGAAAGC...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCTTTCTGTCTCCTCAGTaGCAGAAAAAGCCAGATGGG | + |
|
Preference number: 4 (lower is better) Translates to: AKSLHVDLVRCYEGALSPFLSPQ*QKKPDG Trigger: CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAA...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGTGCTGCTGCTGTTGCTaGTGCAACTTCTTCTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKQGLLTGVSRQRIATPCCCCC*CNFFLL Trigger: CAACAAGAAGAAGTTGCAGCAGCAACAGCAGCAGCA...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCTAAATTCATGGAAATaGTGTCTTGGGAAACTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EALVTGSLNKSLFGPPGQLNSWK*CLGKLG Trigger: CCCTAGTTTCCCAAGACAGCATTTCCATGAATTTAG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCGCTCTCGGATGTTGGTaGGAAGATCGAAACGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFAALGCW*EDRNEG Trigger: CCCTTCGTTTCGATCTTCCCACCAACATCCGAGAGC...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR TCA 90 bp | CTGTCCAAACAGGGTTTATTGACAGGCGTTTCACGGCAACGCATAGCAACCCCGTCTCCACTCCCTCTCTaGATTTTCCAAATCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSKQGLLTGVSRQRIATPSPLPL*IFQISL Trigger: CAAGCTGATTTGGAAAATTCAGAGAGGGAGTGGAGA...CGGGGTTGCTATGCGTTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTTTTCCAAATCAGCTTaGAAGCAGAGAAGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPILELYTPPGRAAELERFSKSA*KQRRYF Trigger: GAAATATCTTCTCTGCTTGCAAGCTGATTTGGAAAA...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCCCCATAATTTCTGACTaGTGGGAAGCACCTGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFAPIISD*WEAPGH Trigger: ATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CCA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGATGGAAATGCTGTCTTaGGAAACTAGGGGGATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGMEMLS*ETRGIF Trigger: AAAAATCCCCCTAGTTTCCCAAGACAGCATTTCCAT...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR GCA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCTGCTGCTGTTGCTGCTaGAACTTCTTCTTGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: PIISDCWEAPGHSDVHFACCCCC*NFFLLI Trigger: AATCAACAAGAAGAAGTTGCAGCAGCAACAGCAGCA...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 90 bp | GGCCGCGGCGCCTCCGGGCGCGTAGCCATTCCAGTCCTCCCGGAGTaGGGCGCCATACGCTGCCGGCCAGGATGGCCCCGGGGACTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GRGASGRVAIPVLPE*GAIRCRPGWPRGLR Trigger: GCGCAGTCCCCGGGGCCATCCTGGCCGGCAGCGTATGGCGCCCCACTCCGGGAGGACTGGAATGGCTACGCGCCCGGAGGCGCCGCGGCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 90 bp | TGGCCCCGGGGACTGCGCGCTGTCCAAGTTCGCTGCCGCTGCAGCTaGGGCCGCCACGTGGTAACCGCCGTAGTCCGGGTACTGCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WPRGLRAVQVRCRCS*GRHVVTAVVRVLRG Trigger: CCCCCGCAGTACCCGGACTACGGCGGTTACCACGTGGCGGCCGCAGCTGCAGCGGCAGCGAACTTGGACAGCGCGCAGTCCCCGGGGCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 90 bp | TGCCGGCCAGGATGGCCCCGGGGACTGCGCGCTGTCCAAGTTCGCTaGCGCTGCAGCTGCGGCCGCCACGTGGTAACCGCCGTAGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: CRPGWPRGLRAVQVR*RCSCGRHVVTAVVR Trigger: CCGGACTACGGCGGTTACCACGTGGCGGCCGCAGCTGCAGCGGCAGCGAACTTGGACAGCGCGCAGTCCCCGGGGCCATCCTGGCCGGCA 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 90 bp | CCAGGATGGCCCCGGGGACTGCGCGCTGTCCAAGTTCGCTGCCGCTaGAGCTGCGGCCGCCACGTGGTAACCGCCGTAGTCCGGGTACTG | + |
|
Preference number: 5 (lower is better) Translates to: PGWPRGLRAVQVRCR*SCGRHVVTAVVRVL Trigger: CAGTACCCGGACTACGGCGGTTACCACGTGGCGGCCGCAGCTGCAGCGGCAGCGAACTTGGACAGCGCGCAGTCCCCGGGGCCATCCTGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 90 bp | GTGGTGGTGCGGATGGTAGTCTGCGGGGCTGCTGTAGCCCATGGCTaGGGCCGGGGAGCCACCGTTGAGGCCGTGAGCCACGGCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VVVRMVVCGAAVAHG*GRGATVEAVSHGVG Trigger: GCCAACGCCGTGGCTCACGGCCTCAACGGTGGCTCCCCGGCCGCAGCCATGGGCTACAGCAGCCCCGCAGACTACCATCCGCACCACCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 90 bp | TGGGACACTTCTCAGAGGACCTGGCTGAGGCTGGGGAGGCTGTGGTaGCGGCGGAGGCGGCTGTGGTGGCTGCTGCTGCTGTTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WDTSQRTWLRLGRLW*RRRRLWWLLLLLLL Trigger: CAGCAGCAACAGCAGCAGCAGCCACCACAGCCGCCTCCGCCGCCACCACAGCCTCCCCAGCCTCAGCCAGGTCCTCTGAGAAGTGTCCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381020.8 ENST00000548877.1 |
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| CDS CCA 90 bp | CTCTGGGACACTTCTCAGAGGACCTGGCTGAGGCTGGGGAGGCTGTaGTGGCGGCGGAGGCGGCTGTGGTGGCTGCTGCTGCTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LWDTSQRTWLRLGRL*WRRRRLWWLLLLLL Trigger: CAGCAACAGCAGCAGCAGCCACCACAGCCGCCTCCGCCGCCACCACAGCCTCCCCAGCCTCAGCCAGGTCCTCTGAGAAGTGTCCCAGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000381020.8 ENST00000548877.1 |
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| CDS GCA 90 bp | CTCCTCGCGGCTCTTCTGCCTCCGAGGCGGTCCCTCCCTCTGGCCTaGCTCCTCCCTCCCTCCCTTTCTTCCTTCTTTCCTCCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLAALLPPRRSLPLA*LLPPSLSSFFPPTS Trigger: GGAGGTGGGAGGAAAGAAGGAAGAAAGGGAGGGAGGGAGGAGGCAGGCCAGAGGGAGGGACCGCCTCGGAGGCAGAAGAGCCGCGAGGAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATACAGGCAGCAGCCATCTaGGCCTCAAGCTTGCCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIQAAAI*ASSLPF Trigger: GAAAGGCAAGCTTGAGGCCAAGATGGCTGCTGCCTG...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 90 bp | GAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTaGTCTGCCGCTGCAGAACCCGGTGGGTCACTGGGTGACGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: EESSRVHAPHGSAWN*SAAAEPGGSLGDGG Trigger: CCCACCGTCACCCAGTGACCCACCGGGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381020.8 ENST00000548877.1 |
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| CDS-3UTR CAA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCCAGGAGGGCCGGGGTaGAGCGTTTGCAGCAGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: EALVTGSLNKSLFGPPGQPGGPG*SVCSSP Trigger: TGGGCTGCTGCAAACGCTCAACCCCGGCCCTCCTGG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAAGCCTCCATGTGGATTaGGTGAGATGCTATGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRPRAGPPEPLSQSWSCISLHVD*VRCYEG Trigger: CCCCTCATAGCATCTCACCAAATCCACATGGAGGCT...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGTTCTGCGGCGCCAGGTaGAGGCCGCCAGAGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRFCGAR*RPPEWR Trigger: GCGCCACTCTGGCGGCCTCAACCTGGCGCCGCAGAA...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | AGGCGCCCGCGGGCCGGGCCACCGGAGCCCCTTTCCCAATCCTGGAGCTGTATAGACAGGAAGTCCAGGTaGGCTCTGGCATTTATAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RRPRAGPPEPLSQSWSCIDRKSR*ALAFIA Trigger: TGCTATAAATGCCAGAGCCAACCTGGACTTCCTGTC...TATACAGCTCCAGGATTGGGAAAGGGGCTCCGGTGGCCCGGCCCGCGGGCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 90 bp | TCTCCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTaGAATTGCTCTGCCGCTGCAGAACCCGGTGGGTCACTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPEESSRVHAPHGSA*NCSAAAEPGGSLGD Trigger: GTCACCCAGTGACCCACCGGGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381020.8 ENST00000548877.1 |
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| CDS-3UTR CAA 90 bp | CCTGAGGAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTGCTCTGCCGGGGTTGAGCGTTaGCAGCAGCCCAGAAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: PEESSRVHAPHGSAWNCSAGVER*QQPRSA Trigger: TGCGCTTCTGGGCTGCTGCAAACGCTCAACCCCGGC...AGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTCCTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCAATCCTGGAGCTGTATACGCCACCCGGAAGGGCCGCGGAATTGGAGAGGTGGCTCAGCCTGGAATaGCTCTGCCGCTGCAGAACC | + |
|
Preference number: 5 (lower is better) Translates to: FPILELYTPPGRAAELERWLSLE*LCRCRT Trigger: GGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCCA...CCTCTCCAATTCCGCGGCCCTTCCGGGTGGCGTATACAGCTCCAGGATTGGGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | GAAGCTCTGGTGACAGGCTCTCTAAACAAGTCCCTGTTCGGGCCCCCTGGTCAGCGTCCTGGTTTTCACTaGGCTGCCGAGGGACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EALVTGSLNKSLFGPPGQRPGFH*AAEGLL Trigger: CAGCAGTCCCTCGGCAGCCAAGTGAAAACCAGGACG...CTGACCAGGGGGCCCGAACAGGGACTTGTTTAGAGAGCCTGTCACCAGAGCTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | CCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGCTGGGCTCAGGCTTGGGGTCCAAACAGGGTTTATaGACAGGCGTTTCACGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PKAPPGEPRIPRLGSGLGSKQGL*TGVSRQ Trigger: TTGCCGTGAAACGCCTGTCAATAAACCCTGTTTGGA...CCCCAAGCCTGAGCCCAGCCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCGGCCCCAAATCCCACTaGTCTTACTCCTGGCTCCCA | + |
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Preference number: 5 (lower is better) Translates to: AIQMCILPKGTPRRATHSGPKSH*SYSWLP Trigger: TGGGAGCCAGGAGTAAGACAAGTGGGATTTGGGGCC...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCAGGATGAAGGCCTGGTaGGTGTGGTCAGTCCAGGCA | + |
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Preference number: 5 (lower is better) Translates to: AKSLHVDLVRCYEGALSPRMKAW*VWSVQA Trigger: TGCCTGGACTGACCACACCAACCAGGCCTTCATCCT...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | GCCATTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCGAGGGTCTATACCTCTaGCTGTTTCCCGGCTCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AIQMCILPKGTPRRATHSEGLYL*LFPGSA Trigger: AGCAGAGCCGGGAAACAGCAAGAGGTATAGACCCTC...GGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | GCAAAAAGCCTCCATGTGGATTTGGTGAGATGCTATGAGGGGGCCCTCTCACCCTGGCTGCTGCTGCTGTaGCTGCTGCAACTTCTTCTT | + |
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Preference number: 5 (lower is better) Translates to: AKSLHVDLVRCYEGALSPWLLLL*LLQLLL Trigger: AAGAAGAAGTTGCAGCAGCAACAGCAGCAGCAGCCA...GGGTGAGAGGGCCCCCTCATAGCATCTCACCAAATCCACATGGAGGCTTTTTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | ATGAAGCCCAGCGGAGGCTTTCTGTCTCCTCAGTGGCAGAAAAAGCCAGATGGGGGGGTTCTGCAGTCTTaGGTCAGTCCAGCTTTCTAT | + |
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Preference number: 5 (lower is better) Translates to: MKPSGGFLSPQWQKKPDGGVLQS*VSPAFY Trigger: ATAGAAAGCTGGACTGACCAAAGACTGCAGAACCCC...CCCATCTGGCTTTTTCTGCCACTGAGGAGACAGAAAGCCTCCGCTGGGCTTCAT 53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | TTCAGATGTGCATTTTGCCCAAAGGCACCCCCAGGAGAGCCACGCATTCCAAGGTTAGGCTCTCGGATGTaGGTGGGAAGATCGAAACGA | + |
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Preference number: 5 (lower is better) Translates to: FRCAFCPKAPPGEPRIPRLGSRM*VGRSKR Trigger: TCGTTTCGATCTTCCCACCAACATCCGAGAGCCTAA...CCTTGGAATGCGTGGCTCTCCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCATTCAGATGTGCATTTaGCCCAAAGGCACCCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PIISDCWEAPGHSDVHFAIQMCI*PKGTPR Trigger: CCTGGGGGTGCCTTTGGGCAAAATGCACATCTGAAT...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCTACACCACTCGATATTaGTCTTTCGTCCTGGTTTTC | + |
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Preference number: 5 (lower is better) Translates to: PIISDCWEAPGHSDVHFAYTTRY*SFVLVF Trigger: GAAAACCAGGACGAAAGACAAATATCGAGTGGTGTA...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS-3UTR CAA 90 bp | CCCATAATTTCTGACTGCTGGGAAGCACCTGGCCATTCAGATGTGCATTTTGCCTTTAAAAACTCTGGCTaGGATGTTACACAGACCAAC | + |
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Preference number: 5 (lower is better) Translates to: PIISDCWEAPGHSDVHFAFKNSG*DVTQTN Trigger: GTTGGTCTGTGTAACATCCAAGCCAGAGTTTTTAAA...GGCAAAATGCACATCTGAATGGCCAGGTGCTTCCCAGCAGTCAGAAATTATGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS TCA 72 bp | TGCTGTAGCCCATGGCTGCGGCCGGGGAGCCACCGTTaGGGCCGTGAGCCACGGCGTTGGCGGCGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: CCSPWLRPGSHR*GREPRRWRRPR Trigger: CCGCGGCCGCCGCCAACGCCGTGGCTCACGGCCTCAACGGTGGCTCCCCGGCCGCAGCCATGGGCTACAGCA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 72 bp | GCCTCCGGGCGCGTAGCCATTCCAGTCCTCCCGGAGTaGGGCGCCATACGCTGCCGGCCAGGATGGCCCCGG | + |
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Preference number: 6 (lower is better) Translates to: ASGRVAIPVLPE*GAIRCRPGWPR Trigger: CCGGGGCCATCCTGGCCGGCAGCGTATGGCGCCCCACTCCGGGAGGACTGGAATGGCTACGCGCCCGGAGGC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 72 bp | GCCGGCTTCCGCATCCACTCGCACAGGTTCCGCCGCTaGCCGCCGGGAGACAGCTGCTCGGCGGCAGCGGTG | + |
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Preference number: 6 (lower is better) Translates to: AGFRIHSHRFRR*PPGDSCSAAAV Trigger: CACCGCTGCCGCCGAGCAGCTGTCTCCCGGCGGCCAGCGGCGGAACCTGTGCGAGTGGATGCGGAAGCCGGC 75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | GCGCCATACGCTGCCGGCCAGGATGGCCCCGGGGACTaGGCGCTGTCCAAGTTCGCTGCCGCTGCAGCTGCG | + |
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Preference number: 6 (lower is better) Translates to: APYAAGQDGPGD*ALSKFAAAAAA Trigger: CGCAGCTGCAGCGGCAGCGAACTTGGACAGCGCGCAGTCCCCGGGGCCATCCTGGCCGGCAGCGTATGGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | CCCCGGGGACTGCGCGCTGTCCAAGTTCGCTGCCGCTaGAGCTGCGGCCGCCACGTGGTAACCGCCGTAGTC | + |
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Preference number: 6 (lower is better) Translates to: PRGLRAVQVRCR*SCGRHVVTAVV Trigger: GACTACGGCGGTTACCACGTGGCGGCCGCAGCTGCAGCGGCAGCGAACTTGGACAGCGCGCAGTCCCCGGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | CGGATGGTAGTCTGCGGGGCTGCTGTAGCCCATGGCTaGGGCCGGGGAGCCACCGTTGAGGCCGTGAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RMVVCGAAVAHG*GRGATVEAVSH Trigger: GTGGCTCACGGCCTCAACGGTGGCTCCCCGGCCGCAGCCATGGGCTACAGCAGCCCCGCAGACTACCATCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | GGACTGCGCGCTGTCCAAGTTCGCTGCCGCTGCAGCTaGGGCCGCCACGTGGTAACCGCCGTAGTCCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: GLRAVQVRCRCS*GRHVVTAVVRV Trigger: TACCCGGACTACGGCGGTTACCACGTGGCGGCCGCAGCTGCAGCGGCAGCGAACTTGGACAGCGCGCAGTCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | GCTCTTCTGCCTCCGAGGCGGTCCCTCCCTCTGGCCTaGCTCCTCCCTCCCTCCCTTTCTTCCTTCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: ALLPPRRSLPLA*LLPPSLSSFFP Trigger: AGGAAAGAAGGAAGAAAGGGAGGGAGGGAGGAGGCAGGCCAGAGGGAGGGACCGCCTCGGAGGCAGAAGAGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | TTCGTCCTGGTTTTCACTTGGCTGCCGAGGGACTGCTaGGCCGGCTTCCGCATCCACTCGCACAGGTTCCGC | + |
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Preference number: 6 (lower is better) Translates to: FVLVFTWLPRDC*AGFRIHSHRFR Trigger: GCGGAACCTGTGCGAGTGGATGCGGAAGCCGGCGCAGCAGTCCCTCGGCAGCCAAGTGAAAACCAGGACGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 72 bp | ACGAAGTTCTGCGGCGCCAGGTTGAGGCCGCCAGAGTaGCGCACGGAGCTAGGGTACATGCTCACGTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: TKFCGARLRPPE*RTELGYMLTSL Trigger: CAAGGACGTGAGCATGTACCCTAGCTCCGTGCGCCACTCTGGCGGCCTCAACCTGGCGCCGCAGAACTTCGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS GCA 72 bp | AGCAGAGTCCACGCTCCTCATGGCTCAGCCTGGAATTaGTCTGCCGCTGCAGAACCCGGTGGGTCACTGGGT | + |
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Preference number: 6 (lower is better) Translates to: SRVHAPHGSAWN*SAAAEPGGSLG Trigger: ACCCAGTGACCCACCGGGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381020.8 ENST00000548877.1 |
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| CDS GCA 72 bp | TCTTTCGTCCTGGTTTTCACTTGGCTGCCGAGGGACTaGTGCGCCGGCTTCCGCATCCACTCGCACAGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SFVLVFTWLPRD*CAGFRIHSHRF Trigger: GAACCTGTGCGAGTGGATGCGGAAGCCGGCGCAGCAGTCCCTCGGCAGCCAAGTGAAAACCAGGACGAAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000381020.8 |
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| CDS CCA 72 bp | GAGTCTAGCAGAGTCCACGCTCCTCATGGCTCAGCCTaGAATTGCTCTGCCGCTGCAGAACCCGGTGGGTCA | + |
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Preference number: 6 (lower is better) Translates to: ESSRVHAPHGSA*NCSAAAEPGGS Trigger: TGACCCACCGGGTTCTGCAGCGGCAGAGCAATTCCAGGCTGAGCCATGAGGAGCGTGGACTCTGCTAGACTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000381020.8 ENST00000548877.1 |
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| CDS CCA 72 bp | TTGTCTTTCGTCCTGGTTTTCACCGAGGCTGATCTGTaGCCTTCTCCCCGGTCGGCGGCATTCCCACCAGGA | + |
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Preference number: 6 (lower is better) Translates to: LSFVLVFTEADL*PSPRSAAFPPG Trigger: TCCTGGTGGGAATGCCGCCGACCGGGGAGAAGGCCACAGATCAGCCTCGGTGAAAACCAGGACGAAAGACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000548877.1 |
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