Pregenerated sensors for CDV3 (Homo sapiens)
Ensembl gene IDs: ENSG00000091527Ensembl transcript IDs: ENST00000264993.8, ENST00000420115.6, ENST00000431519.6, ENST00000504867.5, ENST00000511392.5, ENST00000515421.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCAGAGGAGCAAGTCCACGTGGAGGTTTAAATTCAAGCCAGCTGTaGTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAAAGCCAC | + |
|
Preference number: 1 (lower is better) Translates to: SRGASPRGGLNSSQL*SQSGEKAGIYSKSH Trigger: GTGGCTTTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000420115.6 ENST00000431519.6 |
||
| 3UTR GCA 72 bp | GCAAGTCCACGTGGAGGTTTAAATTCAAGCCAGCTGTaGTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCT | + |
|
Preference number: 3 (lower is better) Translates to: ASPRGGLNSSQL*SQSGEKAGIYS Trigger: AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAAACCTCCACGTGGACTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420115.6 ENST00000431519.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGAGGAGCAAGTCCACGTGGAGGTTTAAATTCAAGCCAGCTGTGCTCTCAAAACGCTGCTCTGTGCTaGGCACTGCGGCCCCAGACC | + |
|
Preference number: 4 (lower is better) Translates to: SRGASPRGGLNSSQLCSQNAALC*ALRPQT Trigger: GGTCTGGGGCCGCAGTGCCCAGCACAGAGCAGCGTT...TTGAGAGCACAGCTGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCTCTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTATCTTCTACTGAACAGTATTAACTGTGACCCTATTTCAGGACAAACTCTCTGTGCTGGGCACTaGGGCCCCAGACCTAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSYLLLNSINCDPISGQTLCAGH*GPRPSA Trigger: GGCACTAGGTCTGGGGCCGCAGTGCCCAGCACAGAG...AGTTTGTCCTGAAATAGGGTCACAGTTAATACTGTTCAGTAGAAGATAGGACCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR GCA 90 bp | TTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTCACTCGCCGCCCGGTTaGTCCGCTCCTTCTTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSSQLCSQSGEKAGIYSHSPPG*SAPSSS Trigger: AGAAGAAGAAGGAGCGGAGCAACCGGGCGGCGAGTG...AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431519.6 |
||
| CDS-3UTR GCA 90 bp | ATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAAAATAAACGCTGCTCTGTaGTGGGCACTGCGGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: IQASCALKVVKRLGFILKINAAL*WALRPQ Trigger: CTGGGGCCGCAGTGCCCAGCACAGAGCAGCGTTTAT...TTTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR GCA 90 bp | GGGTCCTATCTTCTACTGAACAGTATTAACTGTGACCCTATTTCAGGACAAACTCGTCCCGATAAACGCTaGTCTGTGCTGGGCACTGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSYLLLNSINCDPISGQTRPDKR*SVLGTA Trigger: CGCAGTGCCCAGCACAGAGCAGCGTTTATCGGGACG...AGTTTGTCCTGAAATAGGGTCACAGTTAATACTGTTCAGTAGAAGATAGGACCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR GCA 90 bp | TTTAAGACAGAGCAGAGGAGCAAGTCCACGTGGAGGTTTAAATTCAAGCCAGCTAGTGTGGTGAATCACTaGCCTCCCAAGGTCCCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FKTEQRSKSTWRFKFKPASVVNH*PPKVPY Trigger: GTAAGGGACCTTGGGAGGGCAGTGATTCACCACACT...AGCTGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCTCTGCTCTGTCTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR TCA 90 bp | GGGTCCTATCTTCTACTGAACAGTATTAACTGTGACCCTATTTCAGGACAAACTGAAACTCGAGTGTGGTaGATCACTGCCCTCCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSYLLLNSINCDPISGQTETRVW*ITALPR Trigger: CCTTGGGAGGGCAGTGATTCACCACACTCGAGTTTC...AGTTTGTCCTGAAATAGGGTCACAGTTAATACTGTTCAGTAGAAGATAGGACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR GCA 90 bp | TTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTTCAACATTGCCCAGATaGGAGTGGCAGGTCCCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LNSSQLCSQSGEKAGIYSSTLPR*EWQVPS Trigger: TGACGGGACCTGCCACTCGCATCTGGGCAATGTTGA...AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAAACCCTTAGAAGAATCCTaGGGAGGGGTAGGAGTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: IQASCALKVVKRLGFILKPLEES*GGVGVE Trigger: CTCCACTCCTACCCCTCCCCAGGATTCTTCTAAGGG...TTTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR CCA 90 bp | TTTAAGACAGAGCAGAGGAGCAAGTCCACGTGGAGGTTTAAATTCAAGCCAGCTAGGAGCAAGTCCACGTaGAGGTTTAAATTCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FKTEQRSKSTWRFKFKPARSKST*RFKFKP Trigger: TGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCT...AGCTGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCTCTGCTCTGTCTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000420115.6 ENST00000431519.6 |
||
| CDS-3UTR CCA 90 bp | AGTCCACGTGGAGGTTTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGAGGAGCAAGTCCACGTaGAGGTTTAAATTCAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SPRGGLNSSQLCSQSGEKRSKST*RFKFKP Trigger: TGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCT...CTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAAACCTCCACGTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000420115.6 ENST00000431519.6 |
||
| CDS-3UTR GCA 90 bp | AATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAACTCAAATGTCAACATTaGCCAGATGCGAGTGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSSQLCSQSGEKAGIYSKLKCQH*PDASGR Trigger: CCTGCCACTCGCATCTGGGCAATGTTGACATTTGAG...TTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR TCA 90 bp | TTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTCACAGAACGCTGTATTaGAGCTCTAGGGTCCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: LNSSQLCSQSGEKAGIYSHRTLY*SSRVLS Trigger: AGATAGGACCCTAGAGCTTCAATACAGCGTTCTGTG...AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR CCA 90 bp | ATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAAATCTTCTTGTCCCTCTTaGCAAAGAAGTTGTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IQASCALKVVKRLGFILKSSCPS*QRSCPG Trigger: GCCTGGACAACTTCTTTGCCAAGAGGGACAAGAAGA...TTTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000431519.6 |
||
| CDS-3UTR TCA 90 bp | ATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAAATTAGTCCTGATTAGATaGGGCATTATAGCAGCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IQASCALKVVKRLGFILKLVLIR*GIIAAP Trigger: AGGTGCTGCTATAATGCCTCATCTAATCAGGACTAA...TTTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR TCA 90 bp | TTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTGAACAGCCAATACCTTaGAAAACTAGGCACAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LNSSQLCSQSGEKAGIYSEQPIP*KTRHKY Trigger: GTACTTGTGCCTAGTTTTTCAAGGTATTGGCTGTTC...AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR TCA 90 bp | TTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTGGTCCTATCTTCTACTaGACAGTATTAACTGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LNSSQLCSQSGEKAGIYSGPIFY*TVLTVT Trigger: GGTCACAGTTAATACTGTTCAGTAGAAGATAGGACC...AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR GCA 90 bp | AGTCCACGTGGAGGTTTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGACATCTCTCTCTTTATaGACAAGGGTAACAATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SPRGGLNSSQLCSQSGEKTSLSL*TRVTIF Trigger: GAAAATTGTTACCCTTGTGCATAAAGAGAGAGATGT...CTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAAACCTCCACGTGGACT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS-3UTR TCA 90 bp | AATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTAAACTACTCATTAGTCAATaGTTTCTCCTCACATCGATT | + |
|
Preference number: 4 (lower is better) Translates to: NSSQLCSQSGEKAGIYSKLLISQ*FLLTSI Trigger: AATCGATGTGAGGAGAAATCATTGACTAATGAGTAG...TTTAGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS GCA 90 bp | GGCTCGCGCGCCGCCGCTGTCGCCCGAGGCTGCCGGGGCTGCCGCTaGTGCTGCGACGGCGGAGCAGGATTCCGCTCTCCCCACAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSRAAAVARGCRGCR*CCDGGAGFRSPHNL Trigger: CAGGTTGTGGGGAGAGCGGAATCCTGCTCCGCCGTCGCAGCAGCAGCGGCAGCCCCGGCAGCCTCGGGCGACAGCGGCGGCGCGCGAGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264993.8 |
||
| CDS-3UTR CAA 90 bp | TTAAATTCAAGCCAGCTGTGCTCTCAAAGTGGTGAAAAGGCTGGGATTTATTCTGCACTCGCCGCCCGGTaGCTCCGCTCCTTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LNSSQLCSQSGEKAGIYSALAAR*LRSFFF Trigger: GAAGAAGAAGGAGCGGAGCAACCGGGCGGCGAGTGC...AGAATAAATCCCAGCCTTTTCACCACTTTGAGAGCACAGCTGGCTTGAATTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000431519.6 |
||
| CDS-3UTR CAA 90 bp | AGCAGAGGAGCAAGTCCACGTGGAGGTTTAAATTCAAGCCAGCTGTGCTCTCAACCTCAAATGTCAACATaGCCCAGATGCGAGTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRGASPRGGLNSSQLCSQPQMST*PRCEWQ Trigger: CTGCCACTCGCATCTGGGCAATGTTGACATTTGAGG...TTGAGAGCACAGCTGGCTTGAATTTAAACCTCCACGTGGACTTGCTCCTCTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420115.6 |
||
| CDS TCA 90 bp | TTAGAGACTAAGTCATCACAAAAGAGCTGCTACAAATGCGGCTGCTaGAAGCGAAAATTCAGCTCAAACTACTGGGCTGAGGTCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: LETKSSQKSCYKCGC*KRKFSSNYWAEVST Trigger: TGTGCTGACCTCAGCCCAGTAGTTTGAGCTGAATTTTCGCTTTCAGCAGCCGCATTTGTAGCAGCTCTTTTGTGATGACTTAGTCTCTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504867.5 |
||
| CDS GCA 72 bp | GCCGCTGTCGCCCGAGGCTGCCGGGGCTGCCGCTGCTaGTGCGACGGCGGAGCAGGATTCCGCTCTCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: AAVARGCRGCRC*CDGGAGFRSPH Trigger: GTGGGGAGAGCGGAATCCTGCTCCGCCGTCGCAGCAGCAGCGGCAGCCCCGGCAGCCTCGGGCGACAGCGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264993.8 |
||
| CDS GCA 72 bp | GCTGTCGCCCGAGGCTGCCGGGGCTGCCGCTGCTGCTaGGACGGCGGAGCAGGATTCCGCTCTCCCCACAAC | + |
|
Preference number: 6 (lower is better) Translates to: AVARGCRGCRCC*DGGAGFRSPHN Trigger: GTTGTGGGGAGAGCGGAATCCTGCTCCGCCGTCGCAGCAGCAGCGGCAGCCCCGGCAGCCTCGGGCGACAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000264993.8 |
||
| CDS TCA 72 bp | CTGCTGAAAGCGAAAATTCAGCTCAAACTACTGGGCTaGGGTCAGCACACGGAATTACTCAGCCTAGACGTC | + |
|
Preference number: 6 (lower is better) Translates to: LLKAKIQLKLLG*GQHTELLSLDV Trigger: GACGTCTAGGCTGAGTAATTCCGTGTGCTGACCTCAGCCCAGTAGTTTGAGCTGAATTTTCGCTTTCAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000504867.5 |
||
| CDS TCA 72 bp | AAGTCATCACAAAAGAGCTGCTACAAATGCGGCTGCTaGAAGCGAAAATTCAGCTCAAACTACTGGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: KSSQKSCYKCGC*KRKFSSNYWAE Trigger: CTCAGCCCAGTAGTTTGAGCTGAATTTTCGCTTTCAGCAGCCGCATTTGTAGCAGCTCTTTTGTGATGACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000504867.5 |
||
| CDS CAA 72 bp | TTCTTTCCATTCATCTTCGTCATTTCTACTTCAACCTaGCCACCGAGAGTTTTCTTTTTCTTTCACGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: FFPFIFVISTST*PPRVFFFFHGL Trigger: AAGCCCGTGAAAGAAAAAGAAAACTCTCGGTGGCAAGGTTGAAGTAGAAATGACGAAGATGAATGGAAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000511392.5 ENST00000515421.1 |
||