RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for CDS2 (Homo sapiens)

Ensembl gene IDs: ENSG00000101290

Ensembl transcript IDs: ENST00000379070.3, ENST00000450570.1, ENST00000460006.6, ENST00000467923.5, ENST00000468817.5, ENST00000486875.1

Found 509 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAGGGCAGACACGGCTGACCTCTGGGAGGCACAGACACTGGCAGTaGTGGGTCCCATGGGATGCCTGGCACTCCCAGCACAGACAGCTC +
Preference number: 1 (lower is better)
Translates to: PGQTRLTSGRHRHWQ*WVPWDAWHSQHRQL
Trigger: GAGCTGTCTGTGCTGGGAGTGCCAGGCATCCCATGGGACCCATCACTGCCAGTGTCTGTGCCTCCCAGAGGTCAGCCGTGTCTGCCCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp AGAGCGGGAAGTGGGGTCCAGAGCGAGTCACAGACAGGCCCTCCCTaGCCAGAGTGGAGGTACCACCAGACAGGAGGAGATGGCCTTCCC +
Preference number: 1 (lower is better)
Translates to: RAGSGVQSESQTGPP*PEWRYHQTGGDGLP
Trigger: GGGAAGGCCATCTCCTCCTGTCTGGTGGTACCTCCACTCTGGGCAGGGAGGGCCTGTCTGTGACTCGCTCTGGACCCCACTTCCCGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp CTAGGCCCTGCCCAATGCCCGGGAGACCACTGCAAAGGCATTCTCTaGTTGATTTCCAGAGGGCCCTTACCACAACCCCCTCCCCGGCCC +
Preference number: 1 (lower is better)
Translates to: LGPAQCPGDHCKGIL*LISRGPLPQPPPRP
Trigger: GGGCCGGGGAGGGGGTTGTGGTAAGGGCCCTCTGGAAATCAAGCAGAGAATGCCTTTGCAGTGGTCTCCCGGGCATTGGGCAGGGCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp GACCTCTGGGAGGCACAGACACTGGCAGTGATGGGTCCCATGGGATaGCTGGCACTCCCAGCACAGACAGCTCCCCAAAGCAGGTGGGGA +
Preference number: 1 (lower is better)
Translates to: DLWEAQTLAVMGPMG*LALPAQTAPQSRWG
Trigger: TCCCCACCTGCTTTGGGGAGCTGTCTGTGCTGGGAGTGCCAGGCATCCCATGGGACCCATCACTGCCAGTGTCTGTGCCTCCCAGAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp AGGCCCTCCCTGCCCAGAGTGGAGGTACCACCAGACAGGAGGAGATaGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGC +
Preference number: 1 (lower is better)
Translates to: RPSLPRVEVPPDRRR*PSHKQSRLWAEEVS
Trigger: GCTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTGTCTGGTGGTACCTCCACTCTGGGCAGGGAGGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp CCCTGTCACAGAGGAGACAGAGCCAGGGCAGACACGGCTGACCTCTaGGAGGCACAGACACTGGCAGTGATGGGTCCCATGGGATGCCTG +
Preference number: 1 (lower is better)
Translates to: PCHRGDRARADTADL*EAQTLAVMGPMGCL
Trigger: CAGGCATCCCATGGGACCCATCACTGCCAGTGTCTGTGCCTCCCAGAGGTCAGCCGTGTCTGCCCTGGCTCTGTCTCCTCTGTGACAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp CCAGCGAGCGTTCAGCTGGCATCTGTTAGAGTCTGCCCTCCACTGTaGGACTCCTGGCCCCTCCGTGGCCCTGGTATTCCTCCTGCTGCT +
Preference number: 1 (lower is better)
Translates to: PASVQLASVRVCPPL*DSWPLRGPGIPPAA
Trigger: AGCAGCAGGAGGAATACCAGGGCCACGGAGGGGCCAGGAGTCTCACAGTGGAGGGCAGACTCTAACAGATGCCAGCTGAACGCTCGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp CTGGGGGACCCTCCAGGTGTCCTGTGGGTAAAGTGCAGGATGGAGTaGGTCCTGACTCCACCACACTATCCTGGGGAAGCTCCCTGCCTG +
Preference number: 1 (lower is better)
Translates to: LGDPPGVLWVKCRME*VLTPPHYPGEAPCL
Trigger: CAGGCAGGGAGCTTCCCCAGGATAGTGTGGTGGAGTCAGGACTCACTCCATCCTGCACTTTACCCACAGGACACCTGGAGGGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp CAGGAGGGCTCGGGGGCAAGCCTGGGATTGGCCTGTCACAGCAGCTaGTTCCTAGAAACCCCCACAACCATCTTCTCCTGGTTCATGGCA +
Preference number: 1 (lower is better)
Translates to: QEGSGASLGLACHSS*FLETPTTIFSWFMA
Trigger: TGCCATGAACCAGGAGAAGATGGTTGTGGGGGTTTCTAGGAAGCAGCTGCTGTGACAGGCCAATCCCAGGCTTGCCCCCGAGCCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp GGGGGCTGCAAAAGGCTAGGCCCTGCCCAATGCCCGGGAGACCACTaGAAAGGCATTCTCTGCTTGATTTCCAGAGGGCCCTTACCACAA +
Preference number: 1 (lower is better)
Translates to: GGCKRLGPAQCPGDH*KGILCLISRGPLPQ
Trigger: TTGTGGTAAGGGCCCTCTGGAAATCAAGCAGAGAATGCCTTTGCAGTGGTCTCCCGGGCATTGGGCAGGGCCTAGCCTTTTGCAGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp CAGGCAAGGTCCTCTGGGGGCTGCAAAAGGCTAGGCCCTGCCCAATaGCCGGGAGACCACTGCAAAGGCATTCTCTGCTTGATTTCCAGA +
Preference number: 1 (lower is better)
Translates to: QARSSGGCKRLGPAQ*PGDHCKGILCLISR
Trigger: TCTGGAAATCAAGCAGAGAATGCCTTTGCAGTGGTCTCCCGGGCATTGGGCAGGGCCTAGCCTTTTGCAGCCCCCAGAGGACCTTGCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp TCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCAGTGTGGTaGCTGACAATCCCATCTCTGGCATTGCACCAACGGAGGTCAAAC +
Preference number: 1 (lower is better)
Translates to: SLGGTQTVCRVVAVW*LTIPSLALHQRRSN
Trigger: GTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGATTGTCAGCCACCACACTGCCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp TGGCACAGCAGTAGCGCACAGGCACACAGCTATCTGGGGAGGCTGTaGGGACTGTCACGTGGACTCTACACACCGAGAACTGCTTCAAGG +
Preference number: 1 (lower is better)
Translates to: WHSSSAQAHSYLGRL*GLSRGLYTPRTASR
Trigger: CCTTGAAGCAGTTCTCGGTGTGTAGAGTCCACGTGACAGTCCCCACAGCCTCCCCAGATAGCTGTGTGCCTGTGCGCTACTGCTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp CCCCCTCCCCGGCCCAGCAGTGGAGGCTTTCTATGGATACAAGGCTaGCTAGGTCTATTCAACAACACAATGAGGGAGGAAGCACCAGGC +
Preference number: 1 (lower is better)
Translates to: PPPRPSSGGFLWIQG*LGLFNNTMREEAPG
Trigger: GCCTGGTGCTTCCTCCCTCATTGTGTTGTTGAATAGACCTAGGCAGCCTTGTATCCATAGAAAGCCTCCACTGCTGGGCCGGGGAGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp GGGTGTTCAGGCAAAGGGTGCATGAACGAGAAGCCCTCTGCTCCCTaGCCGATGAGAAAGTCCCCAGAAAGGATTCAGCAGCAGCAAGTC +
Preference number: 1 (lower is better)
Translates to: GCSGKGCMNEKPSAP*PMRKSPERIQQQQV
Trigger: GACTTGCTGCTGCTGAATCCTTTCTGGGGACTTTCTCATCGGGCAGGGAGCAGAGGGCTTCTCGTTCATGCACCCTTTGCCTGAACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp ATGGCAACAGCAGCCAGGACTCTTCTGAGAATAGGGCCCACCTTCTaGAGGGATGTGGATAAGGAGAGTCCAGGCCCAAGAGAAGGTGGG +
Preference number: 1 (lower is better)
Translates to: MATAARTLLRIGPTF*RDVDKESPGPREGG
Trigger: CCCACCTTCTCTTGGGCCTGGACTCTCCTTATCCACATCCCTGCAGAAGGTGGGCCCTATTCTCAGAAGAGTCCTGGCTGCTGTTGCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp TTCTCTTCTTGGCCCCTGAGGACATCCACCCATACAGGGAACTGCTaGAGGCTCCTGAGCTATGTGCACAGAAGACAGCCCTTGGCCAGA +
Preference number: 1 (lower is better)
Translates to: FSSWPLRTSTHTGNC*RLLSYVHRRQPLAR
Trigger: TCTGGCCAAGGGCTGTCTTCTGTGCACATAGCTCAGGAGCCTGCAGCAGTTCCCTGTATGGGTGGATGTCCTCAGGGGCCAAGAAGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp ACTTTACAAAGGGGTGGGAGGCACCATGGAGAAACTGACCAGAAATaGTCTGCCCTGTCACAGAGGAGACAGAGCCAGGGCAGACACGGC +
Preference number: 1 (lower is better)
Translates to: TLQRGGRHHGETDQK*SALSQRRQSQGRHG
Trigger: GCCGTGTCTGCCCTGGCTCTGTCTCCTCTGTGACAGGGCAGAGCATTTCTGGTCAGTTTCTCCATGGTGCCTCCCACCCCTTTGTAAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp GGTAAAGTGCAGGATGGAGTGAGTCCTGACTCCACCACACTATCCTaGGGAAGCTCCCTGCCTGGTAAGGTGCTCATGACTCTCACCCGA +
Preference number: 1 (lower is better)
Translates to: GKVQDGVSPDSTTLS*GSSLPGKVLMTLTR
Trigger: TCGGGTGAGAGTCATGAGCACCTTACCAGGCAGGGAGCTTCCCCAGGATAGTGTGGTGGAGTCAGGACTCACTCCATCCTGCACTTTACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp CATGGCTTCAAATCTCCCTGGACGGGTTCTCTGAGCCCAGATTTCTaGTCCCCAACTCGTATGACATCCAGGGCCAGCGAGCGTTCAGCT +
Preference number: 1 (lower is better)
Translates to: HGFKSPWTGSLSPDF*SPTRMTSRASERSA
Trigger: AGCTGAACGCTCGCTGGCCCTGGATGTCATACGAGTTGGGGACCAGAAATCTGGGCTCAGAGAACCCGTCCAGGGAGATTTGAAGCCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp AGTTGGGAAAATGGCACAGCAGTAGCGCACAGGCACACAGCTATCTaGGGAGGCTGTGGGGACTGTCACGTGGACTCTACACACCGAGAA +
Preference number: 1 (lower is better)
Translates to: SWENGTAVAHRHTAI*GGCGDCHVDSTHRE
Trigger: TTCTCGGTGTGTAGAGTCCACGTGACAGTCCCCACAGCCTCCCCAGATAGCTGTGTGCCTGTGCGCTACTGCTGTGCCATTTTCCCAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp GCCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTaGGCTGAAACATCCCGAGGGCTCCATCCTCTGCTGGACACTCTA +
Preference number: 1 (lower is better)
Translates to: AASAPHTYGKSLKDV*AETSRGLHPLLDTL
Trigger: TAGAGTGTCCAGCAGAGGATGGAGCCCTCGGGATGTTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp AGCCAACAGCAATTTAAGCTCCAACCTGGCTCAGGCCAGGCCTCCTaGGCTAGAGGGAAGGAAAGCTGCAACACCTCGGTGTACTCACAC +
Preference number: 1 (lower is better)
Translates to: SQQQFKLQPGSGQAS*ARGKESCNTSVYSH
Trigger: GTGTGAGTACACCGAGGTGTTGCAGCTTTCCTTCCCTCTAGCTCAGGAGGCCTGGCCTGAGCCAGGTTGGAGCTTAAATTGCTGTTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp GCTACATGGGTGTTCAGGCAAAGGGTGCATGAACGAGAAGCCCTCTaGTCCCTGCCCGATGAGAAAGTCCCCAGAAAGGATTCAGCAGCA +
Preference number: 1 (lower is better)
Translates to: ATWVFRQRVHEREAL*SLPDEKVPRKDSAA
Trigger: TGCTGCTGAATCCTTTCTGGGGACTTTCTCATCGGGCAGGGAGCAGAGGGCTTCTCGTTCATGCACCCTTTGCCTGAACACCCATGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp TGCACACCCCCATGTCCTCTTGCCTCGTTAGGGTGGCCTCCTAAATaGTGTGTGAAGCACCAAGATGCTGTAGGGGATGTTAAGGTTGGC +
Preference number: 1 (lower is better)
Translates to: CTPPCPLASLGWPPK*CVKHQDAVGDVKVG
Trigger: GCCAACCTTAACATCCCCTACAGCATCTTGGTGCTTCACACACCATTTAGGAGGCCACCCTAACGAGGCAAGAGGACATGGGGGTGTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp TGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTaGATTCTCAGGCCAGCCATTCTCACTAAGAACAGAACTTCTGCA +
Preference number: 1 (lower is better)
Translates to: WPSHKQSRLWAEEVS*ILRPAILTKNRTSA
Trigger: TGCAGAAGTTCTGTTCTTAGTGAGAATGGCTGGCCTGAGAATCCAGCTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp ATCCCGAGGGCTCCATCCTCTGCTGGACACTCTAGAGACCTGGGCTaGCTGTGCACTTTCAGGGAGGCAGTGAGGCTAATTTACAAACAA +
Preference number: 1 (lower is better)
Translates to: IPRAPSSAGHSRDLG*LCTFREAVRLIYKQ
Trigger: TTGTTTGTAAATTAGCCTCACTGCCTCCCTGAAAGTGCACAGTCAGCCCAGGTCTCTAGAGTGTCCAGCAGAGGATGGAGCCCTCGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp TTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTaGAACATCCCGAGGGCTCCATCCTCTGCTGGACACTCTAGAGAC +
Preference number: 1 (lower is better)
Translates to: FSPTHIWEVTQGCVS*NIPRAPSSAGHSRD
Trigger: GTCTCTAGAGTGTCCAGCAGAGGATGGAGCCCTCGGGATGTTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp CATCTAAGCTGTGCCTCCCACCACAGGTGGGGAAGTCCCCTGATTTaGTCAGACACAGATGAATGTCTGTGTCTGACTGAGCCCAGAAAC +
Preference number: 1 (lower is better)
Translates to: HLSCASHHRWGSPLI*SDTDECLCLTEPRN
Trigger: GTTTCTGGGCTCAGTCAGACACAGACATTCATCTGTGTCTGACCAAATCAGGGGACTTCCCCACCTGTGGTGGGAGGCACAGCTTAGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp GAACAGAACTTCTGCACACCCCCATGTCCTCTTGCCTCGTTAGGGTaGCCTCCTAAATGGTGTGTGAAGCACCAAGATGCTGTAGGGGAT +
Preference number: 1 (lower is better)
Translates to: EQNFCTPPCPLASLG*PPKWCVKHQDAVGD
Trigger: ATCCCCTACAGCATCTTGGTGCTTCACACACCATTTAGGAGGCCACCCTAACGAGGCAAGAGGACATGGGGGTGTGCAGAAGTTCTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp AATATATACACAACACAGCAGCTACATGGGTGTTCAGGCAAAGGGTaGATGAACGAGAAGCCCTCTGCTCCCTGCCCGATGAGAAAGTCC +
Preference number: 1 (lower is better)
Translates to: NIYTTQQLHGCSGKG*MNEKPSAPCPMRKS
Trigger: GGACTTTCTCATCGGGCAGGGAGCAGAGGGCTTCTCGTTCATGCACCCTTTGCCTGAACACCCATGTAGCTGCTGTGTTGTGTATATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp ATGCAGGAGAAATCAGAAAATAAAACACAAGCTGACCCTCTGGCCTaGCTGCTAGCAGCTCTAGTGCGCACTCAGCTTCGGCTTCCTAGA +
Preference number: 1 (lower is better)
Translates to: MQEKSENKTQADPLA*LLAALVRTQLRLPR
Trigger: TCTAGGAAGCCGAAGCTGAGTGCGCACTAGAGCTGCTAGCAGGCAGGCCAGAGGGTCAGCTTGTGTTTTATTTTCTGATTTCTCCTGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 90 bp TCCTCACAACCACCCCAGGAAGAAGGTACTATTATCAGACCCAACTaGCTTCAAGGTAGAAGCTTAGAGCAGCCTAGAAACCTGCCCGCA +
Preference number: 1 (lower is better)
Translates to: SSQPPQEEGTIIRPN*LQGRSLEQPRNLPA
Trigger: TGCGGGCAGGTTTCTAGGCTGCTCTAAGCTTCTACCTTGAAGGCAGTTGGGTCTGATAATAGTACCTTCTTCCTGGGGTGGTTGTGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp GTATTAGCCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTaGAGTCCAGTGTTCCAAAGCACAAGTGAGAGTCCATCCGCGGCT +
Preference number: 1 (lower is better)
Translates to: VLAIIFRPEFVPPAL*SPVFQSTSESPSAA
Trigger: AGCCGCGGATGGACTCTCACTTGTGCTTTGGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGGCTAATAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp AGTGCACAGAGAGAGAGATCAGCTGCATTTAGTGAAACGCCAAGTTaGGAAAATGGCACAGCAGTAGCGCACAGGCACACAGCTATCTGG +
Preference number: 1 (lower is better)
Translates to: SAQRERSAAFSETPS*ENGTAVAHRHTAIW
Trigger: CCAGATAGCTGTGTGCCTGTGCGCTACTGCTGTGCCATTTTCCCAACTTGGCGTTTCACTAAATGCAGCTGATCTCTCTCTCTGTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp AATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAAAGAGGCCCTaGAGAGTGATGCATCCTGCCAGTGACACAGCCAATACTGAAATG +
Preference number: 1 (lower is better)
Translates to: NHRRVELGVAPKKRP*RVMHPASDTANTEM
Trigger: CATTTCAGTATTGGCTGTGTCACTGGCAGGATGCATCACTCTCCAGGGCCTCTTTTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp TGGTCCCCATACAAACAGGTGACAAGGGCTGAGCCAAGGGCTCACTaGCAGTGTGAAGATCTCAACTCAAAGATCCATTCAAATAAGGCT +
Preference number: 1 (lower is better)
Translates to: WSPYKQVTRAEPRAH*QCEDLNSKIHSNKA
Trigger: AGCCTTATTTGAATGGATCTTTGAGTTGAGATCTTCACACTGTCAGTGAGCCCTTGGCTCAGCCCTTGTCACCTGTTTGTATGGGGACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp GTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCAAAGCACAAGTaGGAGTCCATCCGCGGCTTACTGTCTTGCAATGTGTCCATAAAA +
Preference number: 1 (lower is better)
Translates to: VCSTCSLESSVPKHK*ESIRGLLSCNVSIK
Trigger: TTTTATGGACACATTGCAAGACAGTAAGCCGCGGATGGACTCTCACTTGTGCTTTGGAACACTGGACTCCAAAGAGCAGGTGGAACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp CTTACATTCTGCAGGATTTTGGTGTGGATGCATAGAAGGCTTACCTaGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTT +
Preference number: 1 (lower is better)
Translates to: LTFCRILVWMHRRLT*LVSLHSSDLQKATL
Trigger: AAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAGCCTTCTATGCATCCACACCAAAATCCTGCAGAATGTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp AACAATAAACCAAACCGCTGTCTCCTAATCCCTGACTTGTTCTCCTaGCTCCTAGTCCTTTGGTTTCATCGGCCCCTGATGTCTGTTCAA +
Preference number: 1 (lower is better)
Translates to: NNKPNRCLLIPDLFS*LLVLWFHRPLMSVQ
Trigger: TTGAACAGACATCAGGGGCCGATGAAACCAAAGGACTAGGAGTCAGGAGAACAAGTCAGGGATTAGGAGACAGCGGTTTGGTTTATTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp CACACAGTTAGGTGGACCTACAGGAGACATTGGAGCCTAGACATGTaGGAAAGGGCTCAGTTACAGTACATTCTACTGCATACACTTGAA +
Preference number: 1 (lower is better)
Translates to: HTVRWTYRRHWSLDM*ERAQLQYILLHTLE
Trigger: TTCAAGTGTATGCAGTAGAATGTACTGTAACTGAGCCCTTTCCCACATGTCTAGGCTCCAATGTCTCCTGTAGGTCCACCTAACTGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp ATATATTTGGGTGCCAAGTTCTCTCTCCCGCACTCCATCACTTGTTaGCCTGACAAAGAACTAATCTGTCTTCCCAAAGTCAATCTCACC +
Preference number: 1 (lower is better)
Translates to: IYLGAKFSLPHSITC*PDKELICLPKVNLT
Trigger: GGTGAGATTGACTTTGGGAAGACAGATTAGTTCTTTGTCAGGCCAACAAGTGATGGAGTGCGGGAGAGAGAACTTGGCACCCAAATATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp TTCTACCCGGTTACTACTTTTAGAAGGAAACATGAAGCTCCAGATTaGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGCTTTTAGTC +
Preference number: 1 (lower is better)
Translates to: FYPVTTFRRKHEAPD*LRHKDVGRTSRLLV
Trigger: GACTAAAAGCCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTTCCTTCTAAAAGTAGTAACCGGGTAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp TGTCACAGCAGCTGCTTCCTAGAAACCCCCACAACCATCTTCTCCTaGTTCATGGCATTATCATTACTTCAGCAATTCAATGAAACAGAG +
Preference number: 1 (lower is better)
Translates to: CHSSCFLETPTTIFS*FMALSLLQQFNETE
Trigger: CTCTGTTTCATTGAATTGCTGAAGTAATGATAATGCCATGAACCAGGAGAAGATGGTTGTGGGGGTTTCTAGGAAGCAGCTGCTGTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp CATCTTATAAAGCAGAGCTTACTTACATTCTGCAGGATTTTGGTGTaGATGCATAGAAGGCTTACCTGGTTAGTAAGCCTCCATTCCTCC +
Preference number: 1 (lower is better)
Translates to: HLIKQSLLTFCRILV*MHRRLTWLVSLHSS
Trigger: GGAGGAATGGAGGCTTACTAACCAGGTAAGCCTTCTATGCATCCACACCAAAATCCTGCAGAATGTAAGTAAGCTCTGCTTTATAAGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp AACTCCACCCTTTTCTTAGCACATAATCACAGTGTGCAAGAAAGGTaGGCCCAGATATGTTACTCTGGAAGACAAAAGACAATAGTGCCT +
Preference number: 1 (lower is better)
Translates to: NSTLFLAHNHSVQER*AQICYSGRQKTIVP
Trigger: AGGCACTATTGTCTTTTGTCTTCCAGAGTAACATATCTGGGCCCACCTTTCTTGCACACTGTGATTATGTGCTAAGAAAAGGGTGGAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp CTGTGCACAGAGGATTTAAAAGAAACAGCACCCAAAGGACACTCATaGAAACATGTATGCACATTCTGCCTGCTAGAAAACATTCTCAAC +
Preference number: 1 (lower is better)
Translates to: LCTEDLKETAPKGHS*KHVCTFCLLENILN
Trigger: GTTGAGAATGTTTTCTAGCAGGCAGAATGTGCATACATGTTTTCATGAGTGTCCTTTGGGTGCTGTTTCTTTTAAATCCTCTGTGCACAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 90 bp GGGACAAAAGAGACAAATGAGGAGCCCTTTCGGTATCTAGTTTGGTaGTCCAGGTTCATTCTTCAATCTGAAAACTACAGTTTCGTTATT +
Preference number: 1 (lower is better)
Translates to: GTKETNEEPFRYLVW*SRFILQSENYSFVI
Trigger: AATAACGAAACTGTAGTTTTCAGATTGAAGAATGAACCTGGATCACCAAACTAGATACCGAAAGGGCTCCTCATTTGTCTCTTTTGTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 90 bp GGTAAATGCTTTCCAACGTACAGTATATCATGTTCTTACATTGCGTaGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAGTGC +
Preference number: 1 (lower is better)
Translates to: GKCFPTYSISCSYIA*KKNLHVLFNMDHEC
Trigger: GCACTCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAACATGATATACTGTACGTTGGAAAGCATTTACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGTCAGGCCAGGCCTCCTaGGCTAGAGGGAAGGAAAGC +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWSGQAS*ARGKES
Trigger: GCTTTCCTTCCCTCTAGCTCAGGAGGCCTGGCCTGA...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCAAGGATGTGTGAGCTaGAACATCCCGAGGGCTCCA +
Preference number: 2 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEQGCVS*NIPRAP
Trigger: TGGAGCCCTCGGGATGTTTCAGCTCACACATCCTTG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGAGCTGGGCAGCTGCGTaGAGGGTGATCAAGGGAAAA +
Preference number: 2 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGESWAAA*RVIKGK
Trigger: TTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCCTTCTGCAGGGATGTaGATAAGGAGAGTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWPSAGM*IRRVQA
Trigger: GGCCTGGACTCTCCTTATCCACATCCCTGCAGAAGG...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCCCTGTGAGCGGTCATaGGCAGAGCTCCCAGGGGCT +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSPCERS*AELPGA
Trigger: AGCCCCTGGGAGCTCTGCTCATGACCGCTCACAGGG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGGACACAAGGTGGCAGTaGTCTCCTAGCTACCTGACA +
Preference number: 2 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEDTRWQ*SPSYLT
Trigger: TGTCAGGTAGCTAGGAGAGCACTGCCACCTTGTGTC...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGAGAAGGCAACCCTTCTaGAGCTCCAAGCAGGGATTT +
Preference number: 2 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGERRQPF*SSKQGF
Trigger: AAATCCCTGCTTGGAGCTGCAGAAGGGTTGCCTTCT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGTGCTTCACAGTTTTCTaGGCAAGGACACTCTGTCTC +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWCFTVF*ARTLCL
Trigger: GAGACAGAGTGTCCTTGCTCAGAAAACTGTGAAGCA...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGAAGGAGCCCACCATATaGCCACAATGGGACAAAAGA +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWKEPTI*PQWDKR
Trigger: TCTTTTGTCCCATTGTGGGCATATGGTGGGCTCCTT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGGTTAAGAGGGCAGCATaGGCACACACAAAAGGCAAA +
Preference number: 2 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEVKRAA*AHTKGK
Trigger: TTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAAC...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCACACCAGCTGGGCTTaGCTTGGAGACCTGCCCCTG +
Preference number: 2 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHHTSWA*LGDLPL
Trigger: CAGGGGCAGGTCTCCAAGGCAAGCCCAGCTGGTGTG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTGAAACTTTCAGTCTaGGATGAAGGTGAACCCATC +
Preference number: 2 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGELKLSV*DEGEPI
Trigger: GATGGGTTCACCTTCATCGCAGACTGAAAGTTTCAG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGAGAGTTTGTTCCACCTaGTCTTTGGAGTCCAGTGTT +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWRVCST*SLESSV
Trigger: AACACTGGACTCCAAAGAGCAGGTGGAACAAACTCT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACTAAGTCACACCAGCTaGGCTTGCCTTGGAGACCTG +
Preference number: 2 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPLSHTS*ACLGDL
Trigger: CAGGTCTCCAAGGCAAGCCCAGCTGGTGTGACTTAG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCTCCACCACACTATCCTaGGGAAGCTCCCTGCCTGGT +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSSTTLS*GSSLPG
Trigger: ACCAGGCAGGGAGCTTCCCCAGGATAGTGTGGTGGA...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 90 bp TGCAGGGTGGTGGCAGTGTGGTGGCTGACAATCCCATCTCTGGCATaGCACCAACGGAGGTCAAACTACCAGCTGAGCTCAACAAAAGTA +
Preference number: 2 (lower is better)
Translates to: CRVVAVWWLTIPSLA*HQRRSNYQLSSTKV
Trigger: TACTTTTGTTGAGCTCAGCTGGTAGTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGATTGTCAGCCACCACACTGCCACCACCCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGTGGTTTTACAACCCGTaGCTTCTTTCCAACTCAAAG +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWWFYNP*LLSNSK
Trigger: CTTTGAGTTGGAAAGAAGTCACGGGTTGTAAAACCA...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTCTGCTCCCTGCCCGATaGGAAAGTCCCCAGAAAGGA +
Preference number: 2 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSLLPAR*ESPQKG
Trigger: TCCTTTCTGGGGACTTTCTCATCGGGCAGGGAGCAG...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAACACCCTCGTTGGCAATaGAAACATCCACGGCACGGA +
Preference number: 2 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKHPRWQ*KHPRHG
Trigger: TCCGTGCCGTGGATGTTTTCATTGCCAACGAGGGTG...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTAGAGGCCCTGGAGAGTaGTGCATCCTGCCAGTGACA +
Preference number: 2 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSRGPGE*CILPVT
Trigger: TGTCACTGGCAGGATGCATCACTCTCCAGGGCCTCT...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAACAGGTGACAAGGGCTaGGCCAAGGGCTCACTGACA +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRTGDKG*AKGSLT
Trigger: TGTCAGTGAGCCCTTGGCTCAGCCCTTGTCACCTGT...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAACTTGCCTTGGAGACCTaGCCCTGCTCAGTTCTGTTC +
Preference number: 2 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKLALET*PCSVLF
Trigger: GAACAGAACTGAGCAGGGGCAGGTCTCCAAGGCAAG...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTCCTCCAGGTGTCCTGTaGGTAAAGTGCAGGATGGAG +
Preference number: 2 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPPPGVL*VKCRME
Trigger: CTCCATCCTGCACTTTACCCACAGGACACCTGGAGG...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 90 bp CAGTGTTCCAAAGCACAAGTGAGAGTCCATCCGCGGCTTACTGTCTaGCAATGTGTCCATAAAAGTCACCTGGACATCCTCCCCACCCTG +
Preference number: 2 (lower is better)
Translates to: QCSKAQVRVHPRLTV*QCVHKSHLDILPTL
Trigger: CAGGGTGGGGAGGATGTCCAGGTGACTTTTATGGACACATTGCAAGACAGTAAGCCGCGGATGGACTCTCACTTGTGCTTTGGAACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGAAAACATCTAAGCTGTaGCTCCCACCACAGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLKTSKL*LPPQVG
Trigger: CCCCACCTGTGGTGGGAGGCACAGCTTAGATGTTTT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATAAGCCCTCTGCTCCCTaGCCGATGAGAAAGTCCCCA +
Preference number: 2 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHKPSAP*PMRKSP
Trigger: TGGGGACTTTCTCATCGGGCAGGGAGCAGAGGGCTT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGATTATCAGACCCAACTaGCTTCAAGGTAGAAGCTTA +
Preference number: 2 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWIIRPN*LQGRSL
Trigger: TAAGCTTCTACCTTGAAGGCAGTTGGGTCTGATAAT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGCCAGACAGGAGGAGATaGCCTTCCCACAAGCAGTCC +
Preference number: 2 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRPDRRR*PSHKQS
Trigger: GGACTGCTTGTGGGAAGGCCATCTCCTCCTGTCTGG...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 90 bp TCTACCGGCATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATaGGGAGTAGCTCCGAAAAAGAGGCCCTGGAGAGTGATGCATCCT +
Preference number: 2 (lower is better)
Translates to: STGMNLLSQNHRRVE*GVAPKKRPWRVMHP
Trigger: AGGATGCATCACTCTCCAGGGCCTCTTTTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCATGCCGGTAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGGGTGGGGAAGTCCCCTaGTTTGGTCAGACACAGATG +
Preference number: 2 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRGGEVP*FGQTQM
Trigger: CATCTGTGTCTGACCAAATCAGGGGACTTCCCCACC...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATCAGGCAAAGGGTGCATaGACGAGAAGCCCTCTGCTC +
Preference number: 2 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHQAKGA*TRSPLL
Trigger: GAGCAGAGGGCTTCTCGTTCATGCACCCTTTGCCTG...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACTGGTAAGGTGCTCATaGCTCTCACCCGAGGTAAGA +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRLVRCS*LSPEVR
Trigger: TCTTACCTCGGGTGAGAGTCATGAGCACCTTACCAG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGATACGGGGCTCTGCCTaGGTATTAGCCATCATCTTC +
Preference number: 2 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLIRGSA*VLAIIF
Trigger: GAAGATGATGGCTAATACTCAGGCAGAGCCCCGTAT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGCACTGCTGGTCAACCTaGAAGGGAAGGGCGCATTCA +
Preference number: 2 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRHCWST*KGRAHS
Trigger: TGAATGCGCCCTTCCCTTTCAGGTTGACCAGCAGTG...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCAGAGGGAAGGAAAGCTaGAACACCTCGGTGTACTCA +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSRGKES*NTSVYS
Trigger: TGAGTACACCGAGGTGTTGCAGCTTTCCTTCCCTCT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAACCCATACAGGGAACTaGTGCAGGCTCCTGAGCTAT +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRTHTGN*CRLLSY
Trigger: ATAGCTCAGGAGCCTGCAGCAGTTCCCTGTATGGGT...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTTGGAGCCTAGACATGTaGGAAAGGGCTCAGTTACAG +
Preference number: 2 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPWSLDM*ERAQLQ
Trigger: CTGTAACTGAGCCCTTTCCCACATGTCTAGGCTCCA...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGGACACTCTAGAGACCTaGGCTGACTGTGCACTTTCA +
Preference number: 2 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLDTLET*ADCALS
Trigger: TGAAAGTGCACAGTCAGCCCAGGTCTCTAGAGTGTC...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGAGGGTGGTGGCAGTGTaGTGGCTGACAATCCCATCT +
Preference number: 2 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRRVVAV*WLTIPS
Trigger: AGATGGGATTGTCAGCCACCACACTGCCACCACCCT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACTTGCCTCGTTAGGGTaGCCTCCTAAATGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRLASLG*PPKWCV
Trigger: CACACACCATTTAGGAGGCCACCCTAACGAGGCAAG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACAGAAACAGTTCAATTaGTGGGGGCTGGAACCACCA +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRQKQFN*WGLEPP
Trigger: TGGTGGTTCCAGCCCCCATCAATTGAACTGTTTCTG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATTCACTCAAGGATGTGTaGGCTGAAACATCCCGAGGG +
Preference number: 2 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHSLKDV*AETSRG
Trigger: CCCTCGGGATGTTTCAGCTCACACATCCTTGAGTGA...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGAGCCAAGGGCTCACTaGCAGTGTGAAGATCTCAAC +
Preference number: 2 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHEPRAH*QCEDLN
Trigger: GTTGAGATCTTCACACTGTCAGTGAGCCCTTGGCTC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGATCCCATCTCTGGCATTaGACCAACGGAGGTCAAACT +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRSHLWH*TNGGQT
Trigger: AGTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGA...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAGGAAGTCCCCTGATTTaGTCAGACACAGATGAATGT +
Preference number: 2 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPGSPLI*SDTDEC
Trigger: ACATTCATCTGTGTCTGACCAAATCAGGGGACTTCC...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTACCTACAGGAGACATTaGAGCCTAGACATGTGGGAA +
Preference number: 2 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPTYRRH*SLDMWE
Trigger: TTCCCACATGTCTAGGCTCCAATGTCTCCTGTAGGT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCAGCCCCACACACATATaGGAAGTCACTCAAGGATGT +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSSPTHI*EVTQGC
Trigger: ACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCTATATGGACACAAGGTaGCAGTGCTCTCCTAGCTAC +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSYMDTR*QCSPSY
Trigger: GTAGCTAGGAGAGCACTGCCACCTTGTGTCCATATA...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGATGTCTGTGTCTGACTaGGCCCAGAAACAGTTCAAT +
Preference number: 2 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLMSVSD*AQKQFN
Trigger: ATTGAACTGTTTCTGGGCTCAGTCAGACACAGACAT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGATATTCAACAACACAATaGGGGAGGAAGCACCAGGCA +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRYSTTQ*GRKHQA
Trigger: TGCCTGGTGCTTCCTCCCTCATTGTGTTGTTGAATA...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATTTGGAGACCTGCCCCTaGTCAGTTCTGTTCCTGTTC +
Preference number: 2 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHLETCP*SVLFLF
Trigger: GAACAGGAACAGAACTGAGCAGGGGCAGGTCTCCAA...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATCAATTGATGGGGGCTaGAACCACCAAGAAAACACT +
Preference number: 2 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKSIDGG*NHQENT
Trigger: AGTGTTTTCTTGGTGGTTCCAGCCCCCATCAATTGA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 90 bp TCGTTGGCAATGAAAACATCCACGGCACGGAATAGTTTGATATATTaGGGTGCCAAGTTCTCTCTCCCGCACTCCATCACTTGTTGGCCT +
Preference number: 2 (lower is better)
Translates to: SLAMKTSTARNSLIY*GAKFSLPHSITCWP
Trigger: AGGCCAACAAGTGATGGAGTGCGGGAGAGAGAACTTGGCACCCAAATATATCAAACTATTCCGTGCCGTGGATGTTTTCATTGCCAACGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAGGATGGCATTGTCCCTaGAAACACACAGTTAGGTGG +
Preference number: 2 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKGWHCP*KHTVRW
Trigger: CCACCTAACTGTGTGTTTTCAGGGACAATGCCATCC...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCATCACTTGTTGGCCTaGCAAAGAACTAATCTGTCT +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSHHLLA*QRTNLS
Trigger: AGACAGATTAGTTCTTTGTCAGGCCAACAAGTGATG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACGGCACGGAATAGTTTaGTATATTTGGGTGCCAAGT +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRRHGIV*YIWVPS
Trigger: ACTTGGCACCCAAATATATCAAACTATTCCGTGCCG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTGAGAAGCCACGAGGCTaGAATGGAAATAAAAGTTCA +
Preference number: 2 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPEKPRG*NGNKSS
Trigger: TGAACTTTTATTTCCATTTCAGCCTCGTGGCTTCTC...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAGGCTCACTGACAGTGTaGAGATCTCAACTCAAAGAT +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRGSLTV*RSQLKD
Trigger: ATCTTTGAGTTGAGATCTTCACACTGTCAGTGAGCC...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCAAAAGGCTTCAGCAGTaGCATACCACATTTAGTAGG +
Preference number: 2 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSKRLQQ*HTTFSR
Trigger: CCTACTAAATGTGGTATGTCACTGCTGAAGCCTTTT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAAAACACACAGTTAGGTaGACCTACAGGAGACATTGG +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRKHTVR*TYRRHW
Trigger: CCAATGTCTCCTGTAGGTCCACCTAACTGTGTGTTT...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 90 bp ATTACACCCTCGTTGGCAATGAAAACATCCACGGCACGGAATAGTTaGATATATTTGGGTGCCAAGTTCTCTCTCCCGCACTCCATCACT +
Preference number: 2 (lower is better)
Translates to: ITPSLAMKTSTARNS*IYLGAKFSLPHSIT
Trigger: AGTGATGGAGTGCGGGAGAGAGAACTTGGCACCCAAATATATCAAACTATTCCGTGCCGTGGATGTTTTCATTGCCAACGAGGGTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAGATAAGAATCCTTCGTaGCCACTTGGTTTAAACCCT +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRDKNPS*PLGLNP
Trigger: AGGGTTTAAACCAAGTGGTCACGAAGGATTCTTATC...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGGATTTTGGTGTGGATaGATAGAAGGCTTACCTGGT +
Preference number: 2 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSGFWCG*IEGLPG
Trigger: ACCAGGTAAGCCTTCTATGCATCCACACCAAAATCC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAAGCACTAGACCAAGGTaGAGAAGCAAATCATTACAC +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRSTRPR*RSKSLH
Trigger: GTGTAATGATTTGCTTCTGCACCTTGGTCTAGTGCT...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGCATAGAAGGCTTACCTaGTTAGTAAGCCTCCATTCC +
Preference number: 2 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRHRRLT*LVSLHS
Trigger: GGAATGGAGGCTTACTAACCAGGTAAGCCTTCTATG...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCATGCAGGATTTTGGTGTaGATGCATAGAAGGCTTACC +
Preference number: 2 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSCRILV*MHRRLT
Trigger: GGTAAGCCTTCTATGCATCCACACCAAAATCCTGCA...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACACTCCATCACTTGTTaGCCTGACAAAGAACTAATC +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRHSITC*PDKELI
Trigger: GATTAGTTCTTTGTCAGGCCAACAAGTGATGGAGTG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTAAACATTGTGCTATATaGACACAAGGTGGCAGTGCT +
Preference number: 2 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSKHCAI*TQGGSA
Trigger: AGCACTGCCACCTTGTGTCCATATAGCACAATGTTT...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAACCCCATGCAGGTTGTaGCACAAGGCCCCCACCCAA +
Preference number: 2 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRTPCRL*HKAPTQ
Trigger: TTGGGTGGGGGCCTTGTGCCACAACCTGCATGGGGT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTCAAAGCAAAAGTCTCTaGATCAGGACTATGCAGTAT +
Preference number: 2 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSQSKSL*IRTMQY
Trigger: ATACTGCATAGTCCTGATTCAGAGACTTTTGCTTTG...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGTAAGAAGGCTGTTGTaGGAATGTAGGGATACAAGT +
Preference number: 2 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHVRRLL*ECRDTS
Trigger: ACTTGTATCCCTACATTCTCACAACAGCCTTCTTAC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGACAGCCCTGGTTTCTATaGCCCCCTTGTTCCACCAGG +
Preference number: 2 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRQPWFL*PPCSTR
Trigger: CCTGGTGGAACAAGGGGGTCATAGAAACCAGGGCTG...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTAAAATGCCCAGAATATaGAACAAGTTGCCTAAGAGG +
Preference number: 2 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSKMPRI*NKLPKR
Trigger: CCTCTTAGGCAACTTGTTTCATATTCTGGGCATTTT...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAAAGGGGCCTTGGACCTaGATAAGAGAAGCCACGAGG +
Preference number: 2 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRKGPWT*IREATR
Trigger: CCTCGTGGCTTCTCTTATTCAGGTCCAAGGCCCCTT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR GCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACTATTAATAGCAATGTaGTGTTGGGTCCCACTAATA +
Preference number: 2 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRLLIAM*CWVPLI
Trigger: TATTAGTGGGACCCAACAGCACATTGCTATTAATAG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATTCTACAGCACAAACATaGATGGCATTGTCCCTGAAA +
Preference number: 2 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHSTAQT*MALSLK
Trigger: TTTCAGGGACAATGCCATCCATGTTTGTGCTGTAGA...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAAACACAGCAGCTACATaGGTGTTCAGGCAAAGGGTG +
Preference number: 2 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRNTAAT*VFRQRV
Trigger: CACCCTTTGCCTGAACACCCATGTAGCTGCTGTGTT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGTCAAAGGCTGTTTTCTaGATTAAAAGGGATAACGTA +
Preference number: 2 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRSKAVF*IKRDNV
Trigger: TACGTTATCCCTTTTAATCCAGAAAACAGCCTTTGA...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 90 bp AAACAGAGGGACCATTATTTCCATACTATTAATAGCAATGTGCTGTaGGGTCCCACTAATACCCAGGAAATAATCCACAGTCAAACCAGT +
Preference number: 2 (lower is better)
Translates to: KQRDHYFHTINSNVL*GPTNTQEIIHSQTS
Trigger: ACTGGTTTGACTGTGGATTATTTCCTGGGTATTAGTGGGACCCAACAGCACATTGCTATTAATAGTATGGAAATAATGGTCCCTCTGTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGACATTCTGCAGGATTTTaGTGTGGATGCATAGAAGGC +
Preference number: 2 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRHSAGF*CGCIEG
Trigger: GCCTTCTATGCATCCACACCAAAATCCTGCAGAATG...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGAGCACCCCATGCAGGTaGTGGCACAAGGCCCCCACC +
Preference number: 3 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGESTPCR*WHKAPT
Trigger: GGTGGGGGCCTTGTGCCACAACCTGCATGGGGTGCT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp GGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTaGAGGGTGGTGGCAGTGTGGTGGCTGACAATCCCA +
Preference number: 3 (lower is better)
Translates to: GWRASLGGTQTV*RVVAVWWLTIP
Trigger: TGGGATTGTCAGCCACCACACTGCCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AGAGGAGACAGAGCCAGGGCAGACACGGCTGACCTCTaGGAGGCACAGACACTGGCAGTGATGGGTCCCATG +
Preference number: 3 (lower is better)
Translates to: RGDRARADTADL*EAQTLAVMGPM
Trigger: CATGGGACCCATCACTGCCAGTGTCTGTGCCTCCCAGAGGTCAGCCGTGTCTGCCCTGGCTCTGTCTCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp TCCTCTGGGGGCTGCAAAAGGCTAGGCCCTGCCCAATaGCCGGGAGACCACTGCAAAGGCATTCTCTGCTTG +
Preference number: 3 (lower is better)
Translates to: SSGGCKRLGPAQ*PGDHCKGILCL
Trigger: CAAGCAGAGAATGCCTTTGCAGTGGTCTCCCGGGCATTGGGCAGGGCCTAGCCTTTTGCAGCCCCCAGAGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CTGCCCAGAGTGGAGGTACCACCAGACAGGAGGAGATaGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAG +
Preference number: 3 (lower is better)
Translates to: LPRVEVPPDRRR*PSHKQSRLWAE
Trigger: CTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTGTCTGGTGGTACCTCCACTCTGGGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GTTCAGCTGGCATCTGTTAGAGTCTGCCCTCCACTGTaGGACTCCTGGCCCCTCCGTGGCCCTGGTATTCCT +
Preference number: 3 (lower is better)
Translates to: VQLASVRVCPPL*DSWPLRGPGIP
Trigger: AGGAATACCAGGGCCACGGAGGGGCCAGGAGTCTCACAGTGGAGGGCAGACTCTAACAGATGCCAGCTGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp TGGCCCCTGAGGACATCCACCCATACAGGGAACTGCTaGAGGCTCCTGAGCTATGTGCACAGAAGACAGCCC +
Preference number: 3 (lower is better)
Translates to: WPLRTSTHTGNC*RLLSYVHRRQP
Trigger: GGGCTGTCTTCTGTGCACATAGCTCAGGAGCCTGCAGCAGTTCCCTGTATGGGTGGATGTCCTCAGGGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACCAGCTGGGCTTGCCTaGGAGACCTGCCCCTGCTCA +
Preference number: 3 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPPAGLA*ETCPCS
Trigger: TGAGCAGGGGCAGGTCTCCAAGGCAAGCCCAGCTGG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGATCCCATCTCTGGCATaGCACCAACGGAGGTCAAAC +
Preference number: 3 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEIPSLA*HQRRSN
Trigger: GTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGAT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp GCCCAATGCCCGGGAGACCACTGCAAAGGCATTCTCTaGTTGATTTCCAGAGGGCCCTTACCACAACCCCCT +
Preference number: 3 (lower is better)
Translates to: AQCPGDHCKGIL*LISRGPLPQPP
Trigger: AGGGGGTTGTGGTAAGGGCCCTCTGGAAATCAAGCAGAGAATGCCTTTGCAGTGGTCTCCCGGGCATTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AGTAGCGCACAGGCACACAGCTATCTGGGGAGGCTGTaGGGACTGTCACGTGGACTCTACACACCGAGAACT +
Preference number: 3 (lower is better)
Translates to: SSAQAHSYLGRL*GLSRGLYTPRT
Trigger: AGTTCTCGGTGTGTAGAGTCCACGTGACAGTCCCCACAGCCTCCCCAGATAGCTGTGTGCCTGTGCGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AATGGCACAGCAGTAGCGCACAGGCACACAGCTATCTaGGGAGGCTGTGGGGACTGTCACGTGGACTCTACA +
Preference number: 3 (lower is better)
Translates to: NGTAVAHRHTAI*GGCGDCHVDST
Trigger: TGTAGAGTCCACGTGACAGTCCCCACAGCCTCCCCAGATAGCTGTGTGCCTGTGCGCTACTGCTGTGCCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTCACACCAGCTGGGCTaGCCTTGGAGACCTGCCCCT +
Preference number: 3 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLSHQLG*PWRPAP
Trigger: AGGGGCAGGTCTCCAAGGCAAGCCCAGCTGGTGTGA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGTCTTCAGGCCAGAGTTaGTTCCACCTGCTCTTTGGA +
Preference number: 3 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGESSGQS*FHLLFG
Trigger: TCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGA...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp CAATTTAAGCTCCAACCTGGCTCAGGCCAGGCCTCCTaGGCTAGAGGGAAGGAAAGCTGCAACACCTCGGTG +
Preference number: 3 (lower is better)
Translates to: QFKLQPGSGQAS*ARGKESCNTSV
Trigger: CACCGAGGTGTTGCAGCTTTCCTTCCCTCTAGCTCAGGAGGCCTGGCCTGAGCCAGGTTGGAGCTTAAATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp GCAGCCAGGACTCTTCTGAGAATAGGGCCCACCTTCTaGAGGGATGTGGATAAGGAGAGTCCAGGCCCAAGA +
Preference number: 3 (lower is better)
Translates to: AARTLLRIGPTF*RDVDKESPGPR
Trigger: TCTTGGGCCTGGACTCTCCTTATCCACATCCCTGCAGAAGGTGGGCCCTATTCTCAGAAGAGTCCTGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CAGGATGGAGTGAGTCCTGACTCCACCACACTATCCTaGGGAAGCTCCCTGCCTGGTAAGGTGCTCATGACT +
Preference number: 3 (lower is better)
Translates to: QDGVSPDSTTLS*GSSLPGKVLMT
Trigger: AGTCATGAGCACCTTACCAGGCAGGGAGCTTCCCCAGGATAGTGTGGTGGAGTCAGGACTCACTCCATCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AAATCTCCCTGGACGGGTTCTCTGAGCCCAGATTTCTaGTCCCCAACTCGTATGACATCCAGGGCCAGCGAG +
Preference number: 3 (lower is better)
Translates to: KSPWTGSLSPDF*SPTRMTSRASE
Trigger: CTCGCTGGCCCTGGATGTCATACGAGTTGGGGACCAGAAATCTGGGCTCAGAGAACCCGTCCAGGGAGATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGTGCACTCAAAGTGCGTaGGGAAACATGGTCCCTATA +
Preference number: 3 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGECTQSA*GNMVPI
Trigger: TATAGGGACCATGTTTCCCAACGCACTTTGAGTGCA...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GCTCCATCCTCTGCTGGACACTCTAGAGACCTGGGCTaGCTGTGCACTTTCAGGGAGGCAGTGAGGCTAATT +
Preference number: 3 (lower is better)
Translates to: APSSAGHSRDLG*LCTFREAVRLI
Trigger: AATTAGCCTCACTGCCTCCCTGAAAGTGCACAGTCAGCCCAGGTCTCTAGAGTGTCCAGCAGAGGATGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GCCCCACACACATATGGGAAGTCACTCAAGGATGTGTaGGCTGAAACATCCCGAGGGCTCCATCCTCTGCTG +
Preference number: 3 (lower is better)
Translates to: APHTYGKSLKDV*AETSRGLHPLL
Trigger: CAGCAGAGGATGGAGCCCTCGGGATGTTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp GTGTTCAGGCAAAGGGTGCATGAACGAGAAGCCCTCTaGTCCCTGCCCGATGAGAAAGTCCCCAGAAAGGAT +
Preference number: 3 (lower is better)
Translates to: VFRQRVHEREAL*SLPDEKVPRKD
Trigger: ATCCTTTCTGGGGACTTTCTCATCGGGCAGGGAGCAGAGGGCTTCTCGTTCATGCACCCTTTGCCTGAACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp GAGTTGAAGCCTCGTCATTGTCTAAGTCACACCAGCTaGGCTTGCCTTGGAGACCTGCCCCTGCTCAGTTCT +
Preference number: 3 (lower is better)
Translates to: ELKPRHCLSHTS*ACLGDLPLLSS
Trigger: AGAACTGAGCAGGGGCAGGTCTCCAAGGCAAGCCCAGCTGGTGTGACTTAGACAATGACGAGGCTTCAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CAACCCCCTCCCCGGCCCAGCAGTGGAGGCTTTCTATaGATACAAGGCTGCCTAGGTCTATTCAACAACACA +
Preference number: 3 (lower is better)
Translates to: QPPPRPSSGGFL*IQGCLGLFNNT
Trigger: TGTGTTGTTGAATAGACCTAGGCAGCCTTGTATCCATAGAAAGCCTCCACTGCTGGGCCGGGGAGGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AACTCGTATGACATCCAGGGCCAGCGAGCGTTCAGCTaGCATCTGTTAGAGTCTGCCCTCCACTGTGAGACT +
Preference number: 3 (lower is better)
Translates to: NSYDIQGQRAFS*HLLESALHCET
Trigger: AGTCTCACAGTGGAGGGCAGACTCTAACAGATGCCAGCTGAACGCTCGCTGGCCCTGGATGTCATACGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp TTCTGCACACCCCCATGTCCTCTTGCCTCGTTAGGGTaGCCTCCTAAATGGTGTGTGAAGCACCAAGATGCT +
Preference number: 3 (lower is better)
Translates to: FCTPPCPLASLG*PPKWCVKHQDA
Trigger: AGCATCTTGGTGCTTCACACACCATTTAGGAGGCCACCCTAACGAGGCAAGAGGACATGGGGGTGTGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTaGATTCTCAGGCCAGCCATTCTCACTAAGAACAGA +
Preference number: 3 (lower is better)
Translates to: HKQSRLWAEEVS*ILRPAILTKNR
Trigger: TCTGTTCTTAGTGAGAATGGCTGGCCTGAGAATCCAGCTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp CCAAACCGCTGTCTCCTAATCCCTGACTTGTTCTCCTaGCTCCTAGTCCTTTGGTTTCATCGGCCCCTGATG +
Preference number: 3 (lower is better)
Translates to: PNRCLLIPDLFS*LLVLWFHRPLM
Trigger: CATCAGGGGCCGATGAAACCAAAGGACTAGGAGTCAGGAGAACAAGTCAGGGATTAGGAGACAGCGGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp CACTTTACAAAGGGGTGGGAGGCACCATGGAGAAACTaGCCAGAAATGCTCTGCCCTGTCACAGAGGAGACA +
Preference number: 3 (lower is better)
Translates to: HFTKGWEAPWRN*PEMLCPVTEET
Trigger: TGTCTCCTCTGTGACAGGGCAGAGCATTTCTGGTCAGTTTCTCCATGGTGCCTCCCACCCCTTTGTAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CTGACTGAGCCCAGAAACAGTTCAATTGATGGGGGCTaGAACCACCAAGAAAACACTCCTGACCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: LTEPRNSSIDGG*NHQENTPDLGN
Trigger: GTTGCCCAGGTCAGGAGTGTTTTCTTGGTGGTTCCAGCCCCCATCAATTGAACTGTTTCTGGGCTCAGTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AGAGTGGAATTGGGAGTAGCTCCGAAAAAGAGGCCCTaGAGAGTGATGCATCCTGCCAGTGACACAGCCAAT +
Preference number: 3 (lower is better)
Translates to: RVELGVAPKKRP*RVMHPASDTAN
Trigger: ATTGGCTGTGTCACTGGCAGGATGCATCACTCTCCAGGGCCTCTTTTTCGGAGCTACTCCCAATTCCACTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CCATGTCCTCTTGCCTCGTTAGGGTGGCCTCCTAAATaGTGTGTGAAGCACCAAGATGCTGTAGGGGATGTT +
Preference number: 3 (lower is better)
Translates to: PCPLASLGWPPK*CVKHQDAVGDV
Trigger: AACATCCCCTACAGCATCTTGGTGCTTCACACACCATTTAGGAGGCCACCCTAACGAGGCAAGAGGACATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GTGCCCAGGACCTCACTTAATGAGCCTCTACCGGCATaGACTTGCTCAGCCAGAATCACAGAAGAGTGGAAT +
Preference number: 3 (lower is better)
Translates to: VPRTSLNEPLPA*TCSARITEEWN
Trigger: ATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCATGCCGGTAGAGGCTCATTAAGTGAGGTCCTGGGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp CGGCCCAGCAGTGGAGGCTTTCTATGGATACAAGGCTaGCTAGGTCTATTCAACAACACAATGAGGGAGGAA +
Preference number: 3 (lower is better)
Translates to: RPSSGGFLWIQG*LGLFNNTMREE
Trigger: TTCCTCCCTCATTGTGTTGTTGAATAGACCTAGGCAGCCTTGTATCCATAGAAAGCCTCCACTGCTGGGCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGACCTACAGGAGACATaGGAGCCTAGACATGTGGGA +
Preference number: 3 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSDLQET*EPRHVG
Trigger: TCCCACATGTCTAGGCTCCAATGTCTCCTGTAGGTC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp GGTGCCAAGTTCTCTCTCCCGCACTCCATCACTTGTTaGCCTGACAAAGAACTAATCTGTCTTCCCAAAGTC +
Preference number: 3 (lower is better)
Translates to: GAKFSLPHSITC*PDKELICLPKV
Trigger: GACTTTGGGAAGACAGATTAGTTCTTTGTCAGGCCAACAAGTGATGGAGTGCGGGAGAGAGAACTTGGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AGAGAGAGATCAGCTGCATTTAGTGAAACGCCAAGTTaGGAAAATGGCACAGCAGTAGCGCACAGGCACACA +
Preference number: 3 (lower is better)
Translates to: RERSAAFSETPS*ENGTAVAHRHT
Trigger: TGTGTGCCTGTGCGCTACTGCTGTGCCATTTTCCCAACTTGGCGTTTCACTAAATGCAGCTGATCTCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGTTGAAGCCTCGTCATaGTCTAAGTCACACCAGCTG +
Preference number: 3 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSVEASS*SKSHQL
Trigger: CAGCTGGTGTGACTTAGACAATGACGAGGCTTCAAC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGACATTCTGCAGGATTTaGGTGTGGATGCATAGAAGG +
Preference number: 3 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLTFCRI*VWMHRR
Trigger: CCTTCTATGCATCCACACCAAAATCCTGCAGAATGT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCACGGCACGGAATAGTTaGATATATTTGGGTGCCAAG +
Preference number: 3 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSTARNS*IYLGAK
Trigger: CTTGGCACCCAAATATATCAAACTATTCCGTGCCGT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCCTGTTCAAGTGAAATaGTCCTCCCAACTCCACCCT +
Preference number: 3 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHPVQVK*SSQLHP
Trigger: AGGGTGGAGTTGGGAGGACAATTTCACTTGAACAGG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGATCAGTAGGTAGGCATTaGATGGGAAAAGGAAGGGGA +
Preference number: 3 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRSVGRH*MGKGRG
Trigger: TCCCCTTCCTTTTCCCATCAAATGCCTACCTACTGA...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp CCACCCCAGGAAGAAGGTACTATTATCAGACCCAACTaGCTTCAAGGTAGAAGCTTAGAGCAGCCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: PPQEEGTIIRPN*LQGRSLEQPRN
Trigger: GTTTCTAGGCTGCTCTAAGCTTCTACCTTGAAGGCAGTTGGGTCTGATAATAGTACCTTCTTCCTGGGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp TGCAGGATTTTGGTGTGGATGCATAGAAGGCTTACCTaGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAG +
Preference number: 3 (lower is better)
Translates to: CRILVWMHRRLT*LVSLHSSDLQK
Trigger: CTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAGCCTTCTATGCATCCACACCAAAATCCTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp ATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTaGAGTCCAGTGTTCCAAAGCACAAGTGAGAGTCCA +
Preference number: 3 (lower is better)
Translates to: IIFRPEFVPPAL*SPVFQSTSESP
Trigger: TGGACTCTCACTTGTGCTTTGGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATATCATTACACCCTCGTaGGCAATGAAAACATCCACG +
Preference number: 3 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHIITPS*AMKTST
Trigger: CGTGGATGTTTTCATTGCCAACGAGGGTGTAATGAT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp TACAAACAGGTGACAAGGGCTGAGCCAAGGGCTCACTaGCAGTGTGAAGATCTCAACTCAAAGATCCATTCA +
Preference number: 3 (lower is better)
Translates to: YKQVTRAEPRAH*QCEDLNSKIHS
Trigger: TGAATGGATCTTTGAGTTGAGATCTTCACACTGTCAGTGAGCCCTTGGCTCAGCCCTTGTCACCTGTTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp TTTGTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTaGCTGAGTATTAGCCATCATCTTCAGGCCAGAGTT +
Preference number: 3 (lower is better)
Translates to: FVLTKSGKNTGL*LSISHHLQARV
Trigger: AACTCTGGCCTGAAGATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp GGCAAACACAGTTTCACTAGAGACAAAATCACCAGGTaGCTAACCCTTCTGAGTGCTTTATGCAGGCAAGGT +
Preference number: 3 (lower is better)
Translates to: GKHSFTRDKITR*LTLLSALCRQG
Trigger: ACCTTGCCTGCATAAAGCACTCAGAAGGGTTAGCCACCTGGTGATTTTGTCTCTAGTGAAACTGTGTTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp CAAGTTCTCTCTCCCGCACTCCATCACTTGTTGGCCTaGCAAAGAACTAATCTGTCTTCCCAAAGTCAATCT +
Preference number: 3 (lower is better)
Translates to: QVLSPALHHLLA*QRTNLSSQSQS
Trigger: AGATTGACTTTGGGAAGACAGATTAGTTCTTTGTCAGGCCAACAAGTGATGGAGTGCGGGAGAGAGAACTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GCATCCAAACTGCGAGGACAGAGGTGGCTATGTGGATaGTTATCGGCAAACACAGTTTCACTAGAGACAAAA +
Preference number: 3 (lower is better)
Translates to: ASKLRGQRWLCG*LSANTVSLETK
Trigger: TTTTGTCTCTAGTGAAACTGTGTTTGCCGATAATCATCCACATAGCCACCTCTGTCCTCGCAGTTTGGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp CTACTTTTAGAAGGAAACATGAAGCTCCAGATTGGCTaGGTCATAAGGATGTGGGCAGAACTTCTAGGCTTT +
Preference number: 3 (lower is better)
Translates to: LLLEGNMKLQIG*VIRMWAELLGF
Trigger: AAAGCCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTTCCTTCTAAAAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR GCA 72 bp AGACAGAAAAACAGTTTACTAAAGGCCAGAGCCCTGTaGACAGAGGATTTAAAAGAAACAGCACCCAAAGGA +
Preference number: 3 (lower is better)
Translates to: RQKNSLLKARAL*TEDLKETAPKG
Trigger: TCCTTTGGGTGCTGTTTCTTTTAAATCCTCTGTGCACAGGGCTCTGGCCTTTAGTAAACTGTTTTTCTGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AGCTGCTTCCTAGAAACCCCCACAACCATCTTCTCCTaGTTCATGGCATTATCATTACTTCAGCAATTCAAT +
Preference number: 3 (lower is better)
Translates to: SCFLETPTTIFS*FMALSLLQQFN
Trigger: ATTGAATTGCTGAAGTAATGATAATGCCATGAACCAGGAGAAGATGGTTGTGGGGGTTTCTAGGAAGCAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp AATATATTATCAGTATCAACTCTAGAAGATAACCCATaGCTTCAAATCTCCCTGGACGGGTTCTCTGAGCCC +
Preference number: 3 (lower is better)
Translates to: NILSVSTLEDNP*LQISLDGFSEP
Trigger: GGGCTCAGAGAACCCGTCCAGGGAGATTTGAAGCCATGGGTTATCTTCTAGAGTTGATACTGATAATATATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATAATAGTTTGATATATTaGGGTGCCAAGTTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHNSLIY*GAKFSL
Trigger: GAGAGAGAACTTGGCACCCAAATATATCAAACTATT...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR-3UTR CAA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGATGTTCCACCTGCTCTTaGGAGTCCAGTGTTCCAAAG +
Preference number: 3 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRCSTCS*ESSVPK
Trigger: CTTTGGAACACTGGACTCCAAAGAGCAGGTGGAACA...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GAGACAAATGAGGAGCCCTTTCGGTATCTAGTTTGGTaGTCCAGGTTCATTCTTCAATCTGAAAACTACAGT +
Preference number: 3 (lower is better)
Translates to: ETNEEPFRYLVW*SRFILQSENYS
Trigger: ACTGTAGTTTTCAGATTGAAGAATGAACCTGGATCACCAAACTAGATACCGAAAGGGCTCCTCATTTGTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp CTTTTCTTAGCACATAATCACAGTGTGCAAGAAAGGTaGGCCCAGATATGTTACTCTGGAAGACAAAAGACA +
Preference number: 3 (lower is better)
Translates to: LFLAHNHSVQER*AQICYSGRQKT
Trigger: TGTCTTTTGTCTTCCAGAGTAACATATCTGGGCCCACCTTTCTTGCACACTGTGATTATGTGCTAAGAAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR TCA 72 bp GAGGATTTAAAAGAAACAGCACCCAAAGGACACTCATaGAAACATGTATGCACATTCTGCCTGCTAGAAAAC +
Preference number: 3 (lower is better)
Translates to: EDLKETAPKGHS*KHVCTFCLLEN
Trigger: GTTTTCTAGCAGGCAGAATGTGCATACATGTTTTCATGAGTGTCCTTTGGGTGCTGTTTCTTTTAAATCCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CCA 72 bp TTTCCAACGTACAGTATATCATGTTCTTACATTGCGTaGAAAAAGAACCTACATGTATTGTTCAACATGGAT +
Preference number: 3 (lower is better)
Translates to: FPTYSISCSYIA*KKNLHVLFNMD
Trigger: ATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAACATGATATACTGTACGTTGGAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCTCCTTGTCCTCGGGTaGCGCAACCGGCTCATGGGC +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWLLVLG*RNRLMG
Trigger: GCCCATGAGCCGGTTGCGCCACCCGAGGACAAGGAG...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGGCTCGGGGGCAAGCCTaGGATTGGCCTGTCACAGCA +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWARGQA*DWPVTA
Trigger: TGCTGTGACAGGCCAATCCCAGGCTTGCCCCCGAGC...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCCTGGACGGGTTCTCTaGGCCCAGATTTCTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEPGRVL*AQISGP
Trigger: GGGACCAGAAATCTGGGCTCAGAGAACCCGTCCAGG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTCCGGGGTATCATCTaGAGAGACTGGCAGGGGTGC +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGELRGII*RDWQGC
Trigger: GCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTGCTCCCTGCCCGATaGGAAAGTCCCCAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGELLPAR*ESPQKG
Trigger: TCCTTTCTGGGGACTTTCTCATCGGGCAGGGAGCAG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCAGCCCTGGTTTCTATaGCCCCCTTGTTCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEQPWFL*PPCSTR
Trigger: CCTGGTGGAACAAGGGGGTCATAGAAACCAGGGCTG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAAGAGCTCCCAGGGGCTaGGGGGTGCCCATCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPRAPRG*GVPISP
Trigger: AGGGCTGATGGGCACCCCCCAGCCCCTGGGAGCTCT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGTATCTGGGGAGGCTGTaGGGACTGTCACGTGGACTC +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEYLGRL*GLSRGL
Trigger: GAGTCCACGTGACAGTCCCCACAGCCTCCCCAGATA...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGTGGAAAGGGCCCTATTaGGGACCTCCGGGGTATCAT +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEWKGPY*GPPGYH
Trigger: ATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCA...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACCCTGTGAGCGGTCATaGGCAGAGCTCCCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPPCERS*AELPGA
Trigger: AGCCCCTGGGAGCTCTGCTCATGACCGCTCACAGGG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCTTGCCTTGGAGACCTaGCCCTGCTCAGTTCTGTTC +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWLALET*PCSVLF
Trigger: GAACAGAACTGAGCAGGGGCAGGTCTCCAAGGCAAG...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGAGCTGGGCAGCTGCGTaGAGGGTGATCAAGGGAAAA +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWSWAAA*RVIKGK
Trigger: TTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGAAGGGCGCATTCAGATaGCAACAGCAGCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEKGAFR*QQQPGL
Trigger: GAGTCCTGGCTGCTGTTGCCATCTGAATGCGCCCTT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGTTGGAGACCTGCCCCTaGTCAGTTCTGTTCCTGTTC +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGELETCP*SVLFLF
Trigger: GAACAGGAACAGAACTGAGCAGGGGCAGGTCTCCAA...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACACACCAGCTGGGCTTaGCTTGGAGACCTGCCCCTG +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPHTSWA*LGDLPL
Trigger: CAGGGGCAGGTCTCCAAGGCAAGCCCAGCTGGTGTG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTTGCCTCGTTAGGGTaGCCTCCTAAATGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGELASLG*PPKWCV
Trigger: CACACACCATTTAGGAGGCCACCCTAACGAGGCAAG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTGCCCCTCCGTGGCCCTaGTATTCCTCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPAPPWP*YSSCCC
Trigger: GCAGCAGCAGGAGGAATACCAGGGCCACGGAGGGGC...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCAGAAACAGTTCAATTaGTGGGGGCTGGAACCACCA +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWQKQFN*WGLEPP
Trigger: TGGTGGTTCCAGCCCCCATCAATTGAACTGTTTCTG...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAGTCTGCCCTCCACTGTaGGACTCCTGGCCCCTCCGT +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRVCPPL*DSWPLR
Trigger: ACGGAGGGGCCAGGAGTCTCACAGTGGAGGGCAGAC...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACAGGGCAGACACGGCTaGCCTCTGGGAGGCACAGAC +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRQGRHG*PLGGTD
Trigger: GTCTGTGCCTCCCAGAGGTCAGCCGTGTCTGCCCTG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGCAGGGGTGCGGATTCTaGCCGGCTCTCACTGTCCGA +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLQGCGF*PALTVR
Trigger: TCGGACAGTGAGAGCCGGGCAGAATCCGCACCCCTG...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTAGAGACTGGCAGGGGTaGGGATTCTGCCCGGCTCTC +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPRDWQG*GFCPAL
Trigger: GAGAGCCGGGCAGAATCCGCACCCCTGCCAGTCTCT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGCAGACAGGCCCTCCCTaGCCAGAGTGGAGGTACCAC +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLQTGPP*PEWRYH
Trigger: GTGGTACCTCCACTCTGGGCAGGGAGGGCCTGTCTG...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGAAGCTCCAGATTGGCTaGGTCATAAGGATGTGGGCA +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEKLQIG*VIRMWA
Trigger: TGCCCACATCCTTATGACGCAGCCAATCTGGAGCTT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGGCGCAACCGGCTCATaGGCCACCCTCTGCCTCAGC +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSGATGS*ATLCLS
Trigger: GCTGAGGCAGAGGGTGGCCCATGAGCCGGTTGCGCC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATCAGGCCAGGCCTCCTaGGCTAGAGGGAAGGAAAGC +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKSGQAS*ARGKES
Trigger: GCTTTCCTTCCCTCTAGCTCAGGAGGCCTGGCCTGA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAAGACTCGGTACCCTGTaGGCGGTCATGAGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPRLGTL*AVMSRA
Trigger: AGCTCTGCTCATGACCGCTCACAGGGTACCGAGTCT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACCCCATACAAACAGGTaGCAAGGGCTGAGCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPPHTNR*QGLSQG
Trigger: CCCTTGGCTCAGCCCTTGTCACCTGTTTGTATGGGG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGGGATACCTCCTAAACTaGACTCAAAGTGCGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEGYLLN*TQSALG
Trigger: TCCCAACGCACTTTGAGTGCAGTTTAGGAGGTATCC...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCGGCCTCAGTCATACTaGCTCAGTTTCCTCATCTAT +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGERPQSY*LSFLIY
Trigger: ATAGATGAGGAAACTGAGGCAGTATGACTGAGGCCG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGGGACCCAGACTGTGTaGAGGGTGGTGGCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSGTQTV*RVVAVW
Trigger: CCACACTGCCACCACCCTGCACACAGTCTGGGTCCC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTACCCCCATGTCCTCTTaGCTCGTTAGGGTGGCCTCC +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPTPMSS*LVRVAS
Trigger: GGAGGCCACCCTAACGAGGCAAGAGGACATGGGGGT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGAGCCCCACACACATATaGGAAGTCACTCAAGGATGT +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWSPTHI*EVTQGC
Trigger: ACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCACCCCATGCAGGTTGTaGCACAAGGCCCCCACCCAA +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSTPCRL*HKAPTQ
Trigger: TTGGGTGGGGGCCTTGTGCCACAACCTGCATGGGGT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGATAGCAATGTGCTGTTaGGTCCCACTAATACCCAGG +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWIAMCC*VPLIPR
Trigger: CCTGGGTATTAGTGGGACCCAACAGCACATTGCTAT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTGGGCAAGCCTGGGATTaGCCTGTCACAGCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPGQAWD*PVTAAA
Trigger: AGCAGCTGCTGTGACAGGCCAATCCCAGGCTTGCCC...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCTCCTGGCCCCTCCGTaGCCCTGGTATTCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHLLAPP*PWYSSC
Trigger: GCAGGAGGAATACCAGGGCCACGGAGGGGCCAGGAG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 72 bp GTGGCAGTGTGGTGGCTGACAATCCCATCTCTGGCATaGCACCAACGGAGGTCAAACTACCAGCTGAGCTCA +
Preference number: 4 (lower is better)
Translates to: VAVWWLTIPSLA*HQRRSNYQLSS
Trigger: TGAGCTCAGCTGGTAGTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGATTGTCAGCCACCACACTGCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACCGTTTTCCAGCCAATaGCTGACTGGATCACCCCAG +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPPFSSQ*LTGSPQ
Trigger: CTGGGGTGATCCAGTCAGTCATTGGCTGGAAAACGG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGATGTCTGTGTCTGACTaGGCCCAGAAACAGTTCAAT +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEMSVSD*AQKQFN
Trigger: ATTGAACTGTTTCTGGGCTCAGTCAGACACAGACAT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGAGAGGCCCTGGAGAGTaGTGCATCCTGCCAGTGACA +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLRGPGE*CILPVT
Trigger: TGTCACTGGCAGGATGCATCACTCTCCAGGGCCTCT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAGAGCCTCTACCGGCATaGACTTGCTCAGCCAGAATC +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPEPLPA*TCSARI
Trigger: GATTCTGGCTGAGCAAGTTCATGCCGGTAGAGGCTC...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGACAGGTGACAAGGGCTaGGCCAAGGGCTCACTGACA +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLTGDKG*AKGSLT
Trigger: TGTCAGTGAGCCCTTGGCTCAGCCCTTGTCACCTGT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGAGAAACCTGTTCAAGTaGAATTGTCCTCCCAACTCC +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGERNLFK*NCPPNS
Trigger: GGAGTTGGGAGGACAATTTCACTTGAACAGGTTTCT...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGAGAGACAGCCCCAGATaGGAACAGCCTCCATCCACC +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLRDSPR*EQPPST
Trigger: GGTGGATGGAGGCTGTTCTCATCTGGGGCTGTCTCT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGGTCCCCAACTCGTATaGCATCCAGGGCCAGCGAGC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHGPQLV*HPGPAS
Trigger: GCTCGCTGGCCCTGGATGTCATACGAGTTGGGGACC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGACAAAAGGCTAGGCCCTaGCCAATGCCCGGGAGACCA +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRQKARP*PMPGRP
Trigger: TGGTCTCCCGGGCATTGGGCAGGGCCTAGCCTTTTG...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGAGGTCCTCTGGGGGCTaGAAAAGGCTAGGCCCTGCC +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRRSSGG*KRLGPA
Trigger: GGCAGGGCCTAGCCTTTTGCAGCCCCCAGAGGACCT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGTCAATTGATGGGGGCTaGAACCACCAAGAAAACACT +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWSIDGG*NHQENT
Trigger: AGTGTTTTCTTGGTGGTTCCAGCCCCCATCAATTGA...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCATCAGCTCTGTCATCCTaGGAAAATCGGCCCGACGTC +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPSALSS*ENRPDV
Trigger: GACGTCGGGCCGATTTTCCCAGGATGACAGAGCTGA...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCCAGACAGGAGGAGATaGCCTTCCCACAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSPDRRR*PSHKQS
Trigger: GGACTGCTTGTGGGAAGGCCATCTCCTCCTGTCTGG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGGCCAGAGCGGGAAGTaGGGTCCAGAGCGAGTCACA +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSGQSGK*GPERVT
Trigger: TGTGACTCGCTCTGGACCCCACTTCCCGCTCTGGCC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGGACCTAGGAATTTCATaGATCCTGTTAGCCAACACC +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWDLGIS*ILLANT
Trigger: GGTGTTGGCTAACAGGATCCATGAAATTCCTAGGTC...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCTAGAAGATAACCCATaGCTTCAAATCTCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWLEDNP*LQISLD
Trigger: GTCCAGGGAGATTTGAAGCCATGGGTTATCTTCTAG...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAGTCCCATGGGATGCCTaGCACTCCCAGCACAGACAG +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRVPWDA*HSQHRQ
Trigger: CTGTCTGTGCTGGGAGTGCCAGGCATCCCATGGGAC...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGAAAGTCAGGAACTGCTaGATCAGTTTGCTTGGGTTA +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWKVRNC*ISLLGL
Trigger: TAACCCAAGCAAACTGATTCAGCAGTTCCTGACTTT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTGGTGGGGAAGTCCCCTaGTTTGGTCAGACACAGATG +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPGGEVP*FGQTQM
Trigger: CATCTGTGTCTGACCAAATCAGGGGACTTCCCCACC...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTTCTAGAGACCTGGGCTaGCTGTGCACTTTCAGGGAG +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPSRDLG*LCTFRE
Trigger: CTCCCTGAAAGTGCACAGTCAGCCCAGGTCTCTAGA...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGCTACAGTTTCGTTATTaGTCACCTTTACTGTTCGGG +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGELQFRY*SPLLFG
Trigger: CCCGAACAGTAAAGGTGATCAATAACGAAACTGTAG...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCATGCCCGCACCTAGGGTaGTTTGATCCCAAAGTCTGT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPCPHLG*FDPKVC
Trigger: ACAGACTTTGGGATCAAATCACCCTAGGTGCGGGCA...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGACTGCTGCAGGCTCCTaGGCTATGTGCACAGAAGAC +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLTAAGS*AMCTED
Trigger: GTCTTCTGTGCACATAGCTCAGGAGCCTGCAGCAGT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGTTCTCCCTTCATTCATaGGTCACCCATTTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWFSLHS*VTHLSL
Trigger: AAGACTCAAATGGGTGACTCATGAATGAAGGGAGAA...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAGAACGAGAAGCCCTCTaGTCCCTGCCCGATGAGAAA +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKEREAL*SLPDEK
Trigger: TTTCTCATCGGGCAGGGAGCAGAGGGCTTCTCGTTC...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCTGCCCGGGAGACCACTaGAAAGGCATTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSCPGDH*KGILCL
Trigger: CAAGCAGAGAATGCCTTTGCAGTGGTCTCCCGGGCA...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACTTCTGAGTGCTTTATaGAGGCAAGGTCCTCTGGGG +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPLLSAL*RQGPLG
Trigger: CCCCAGAGGACCTTGCCTGCATAAAGCACTCAGAAG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAATGGGTCCCATGGGATaGCTGGCACTCCCAGCACAG +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSMGPMG*LALPAQ
Trigger: CTGTGCTGGGAGTGCCAGGCATCCCATGGGACCCAT...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATTCTCCTGGCCCTGGGTaGCCCCTACTCGTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHSPGPG*PLLVLC
Trigger: ACAGAGGACGAGTAGGGGCCACCCAGGGCCAGGAGA...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGCTAAGTCACACCAGCTaGGCTTGCCTTGGAGACCTG +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLLSHTS*ACLGDL
Trigger: CAGGTCTCCAAGGCAAGCCCAGCTGGTGTGACTTAG...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGATCCACCACACTATCCTaGGGAAGCTCCCTGCCTGGT +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRSTTLS*GSSLPG
Trigger: ACCAGGCAGGGAGCTTCCCCAGGATAGTGTGGTGGA...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAACCTTCTGCAGGGATGTaGATAAGGAGAGTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKPSAGM*IRRVQA
Trigger: GGCCTGGACTCTCCTTATCCACATCCCTGCAGAAGG...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGAGGGTGGTGGCAGTGTaGTGGCTGACAATCCCATCT +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLRVVAV*WLTIPS
Trigger: AGATGGGATTGTCAGCCACCACACTGCCACCACCCT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAGCAGAGGAGGTGAGCTaGATTCTCAGGCCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKAEEVS*ILRPAI
Trigger: AATGGCTGGCCTGAGAATCCAGCTCACCTCCTCTGC...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCACCTCCCTGCCCAGAGTaGAGGTACCACCAGACAGGA +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSPPCPE*RYHQTG
Trigger: TCCTGTCTGGTGGTACCTCCACTCTGGGCAGGGAGG...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTCCCCGGCCCAGCAGTaGAGGCTTTCTATGGATACA +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLSPAQQ*RLSMDT
Trigger: TGTATCCATAGAAAGCCTCCACTGCTGGGCCGGGGA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGGTGGGGACTGTCACGTaGACTCTACACACCGAGAAC +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLVGTVT*TLHTEN
Trigger: GTTCTCGGTGTGTAGAGTCCACGTGACAGTCCCCAC...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTCCAGGGCAGATCATATaGGTGGTAGACGTTGTAGCC +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPPGQII*VVDVVA
Trigger: GGCTACAACGTCTACCACTCATATGATCTGCCCTGG...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAACTCTCTGGACCAGGGTaGAGAAGTAATCCGTCACTG +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKLSGPG*RSNPSL
Trigger: CAGTGACGGATTACTTCTTCACCCTGGTCCAGAGAG...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGAGTCAAAGCGATCCATaGTGCCTCCATGGCCAGGAA +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLSQSDP*CLHGQE
Trigger: TTCCTGGCCATGGAGGCATCATGGATCGCTTTGACT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGAGACCGCAGCGTGTTaGAGATGTGGAGCTGCTGAT +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSETAAC*RCGAAD
Trigger: ATCAGCAGCTCCACATCTTCAACACGCTGCGGTCTC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCAGGCAAAGGGTGCATaGACGAGAAGCCCTCTGCTC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHQAKGA*TRSPLL
Trigger: GAGCAGAGGGCTTCTCGTTCATGCACCCTTTGCCTG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTAAGGGGCCTTGGACCTaGATAAGAGAAGCCACGAGG +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSKGPWT*IREATR
Trigger: CCTCGTGGCTTCTCTTATTCAGGTCCAAGGCCCCTT...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGCTGGTAAGGTGCTCATaGCTCTCACCCGAGGTAAGA +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLLVRCS*LSPEVR
Trigger: TCTTACCTCGGGTGAGAGTCATGAGCACCTTACCAG...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAGAGCCAAGGGCTCACTaGCAGTGTGAAGATCTCAAC +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKEPRAH*QCEDLN
Trigger: GTTGAGATCTTCACACTGTCAGTGAGCCCTTGGCTC...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCGTTCCAAAGCACAAGTaGGAGTCCATCCGCGGCTTA +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSVPKHK*ESIRGL
Trigger: TAAGCCGCGGATGGACTCTCACTTGTGCTTTGGAAC...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTCACTGCTGGTCAACCTaGAAGGGAAGGGCGCATTCA +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSHCWST*KGRAHS
Trigger: TGAATGCGCCCTTCCCTTTCAGGTTGACCAGCAGTG...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAAAAACATCTAAGCTGTaGCTCCCACCACAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKKTSKL*LPPQVG
Trigger: CCCCACCTGTGGTGGGAGGCACAGCTTAGATGTTTT...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGAAGCCCTCTGCTCCCTaGCCGATGAGAAAGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRKPSAP*PMRKSP
Trigger: TGGGGACTTTCTCATCGGGCAGGGAGCAGAGGGCTT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAACCCATACAGGGAACTaGTGCAGGCTCCTGAGCTAT +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKTHTGN*CRLLSY
Trigger: ATAGCTCAGGAGCCTGCAGCAGTTCCCTGTATGGGT...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAGACACTCTAGAGACCTaGGCTGACTGTGCACTTTCA +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPDTLET*ADCALS
Trigger: TGAAAGTGCACAGTCAGCCCAGGTCTCTAGAGTGTC...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAGTTCCACCTGCTCTTTaGAGTCCAGTGTTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPVPPAL*SPVFQS
Trigger: GCTTTGGAACACTGGACTCCAAAGAGCAGGTGGAAC...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGAAGCAGTCCAGACTGTaGGCAGAGGAGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRKQSRL*AEEVSW
Trigger: CCAGCTCACCTCCTCTGCCCACAGTCTGGACTGCTT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAGACACGGCTGACCTCTaGGAGGCACAGACACTGGCA +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKDTADL*EAQTLA
Trigger: TGCCAGTGTCTGTGCCTCCCAGAGGTCAGCCGTGTC...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATAGGCACACAGCTATCTaGGGAGGCTGTGGGGACTGT +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHRHTAI*GGCGDC
Trigger: ACAGTCCCCACAGCCTCCCCAGATAGCTGTGTGCCT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCACCCTCGTTGGCAATaGAAACATCCACGGCACGGA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHHPRWQ*KHPRHG
Trigger: TCCGTGCCGTGGATGTTTTCATTGCCAACGAGGGTG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGAAGTGCAGGATGGAGTaGGTCCTGACTCCACCACAC +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRKCRME*VLTPPH
Trigger: GTGTGGTGGAGTCAGGACTCACTCCATCCTGCACTT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGAAGGCATTCTCTGCTTaGTTTCCAGAGGGCCCTTAC +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLKAFSA*FPEGPY
Trigger: GTAAGGGCCCTCTGGAAATCAAGCAGAGAATGCCTT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAGGTTTCATCGGCCCCTaGTGTCTGTTCAACTCTTCC +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRGFIGP*CLFNSS
Trigger: GGAAGAGTTGAACAGACATCAGGGGCCGATGAAACC...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGCACCATGGAGAAACTaGCCAGAAATGCTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSAPWRN*PEMLCP
Trigger: AGGGCAGAGCATTTCTGGTCAGTTTCTCCATGGTGC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGAACATGATGAGCCTTaGCCAGTATGCTCGGCTCCC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHEHDEP*PVCSAP
Trigger: GGGAGCCGAGCATACTGGGCAAGGCTCATCATGTTC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAAACCCTAGCACCCCATaGAGGTTGTGGCACAAGGCC +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKNPSTP*RLWHKA
Trigger: GGCCTTGTGCCACAACCTGCATGGGGTGCTAGGGTT...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAATAGGGCCCACCTTCTaGAGGGATGTGGATAAGGAG +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRIGPTF*RDVDKE
Trigger: CTCCTTATCCACATCCCTGCAGAAGGTGGGCCCTAT...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCGTCTGTCTTAACCACTaGTCTCGGCCTCAGTCATAC +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSVCLNH*SRPQSY
Trigger: GTATGACTGAGGCCGAGAGCAGTGGTTAAGACAGAC...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGTCCCATCTCTGGCATTaGACCAACGGAGGTCAAACT +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLSHLWH*TNGGQT
Trigger: AGTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGA...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGCCTGTCACAGCAGCTaGTTCCTAGAAACCCCCACA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHACHSS*FLETPT
Trigger: TGTGGGGGTTTCTAGGAAGCAGCTGCTGTGACAGGC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTTGCAAAGGCATTCTCTaGTTGATTTCCAGAGGGCCC +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPCKGIL*LISRGP
Trigger: GGGCCCTCTGGAAATCAAGCAGAGAATGCCTTTGCA...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGCCTTCAAATAGGTTGTaGATAACAAGATGTGACTGT +
Preference number: 4 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWPSNRL*ITRCDC
Trigger: ACAGTCACATCTTGTTATCCACAACCTATTTGAAGG...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATGGAGCCTAGACATGTaGGAAAGGGCTCAGTTACAG +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKWSLDM*ERAQLQ
Trigger: CTGTAACTGAGCCCTTTCCCACATGTCTAGGCTCCA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTAACACAGCAGCTACATaGGTGTTCAGGCAAAGGGTG +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPNTAAT*VFRQRV
Trigger: CACCCTTTGCCTGAACACCCATGTAGCTGCTGTGTT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGAAAAACACTTCCTGTTTaGGGGGTGCCCAGGACCTCA +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRKTLPV*GVPRTS
Trigger: TGAGGTCCTGGGCACCCCCCAAACAGGAAGTGTTTT...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCCTCCAGGTGTCCTGTaGGTAAAGTGCAGGATGGAG +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHPPGVL*VKCRME
Trigger: CTCCATCCTGCACTTTACCCACAGGACACCTGGAGG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGGGGTGGCCTCCTAAATaGTGTGTGAAGCACCAAGAT +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLGWPPK*CVKHQD
Trigger: ATCTTGGTGCTTCACACACCATTTAGGAGGCCACCC...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCATCATGTGTCCTCAATaGGTCACCCACTTCTACCCG +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSIMCPQ*VTHFYP
Trigger: CGGGTAGAAGTGGGTGACCCATTGAGGACACATGAT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCACAGCGAGCGTTCAGCTaGCATCTGTTAGAGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSQRAFS*HLLESA
Trigger: GGCAGACTCTAACAGATGCCAGCTGAACGCTCGCTG...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCTGAGCCCAGATTTCTaGTCCCCAACTCGTATGACA +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSLSPDF*SPTRMT
Trigger: TGTCATACGAGTTGGGGACCAGAAATCTGGGCTCAG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGCTCACAGTCCACAGTaGAGCTGTTGGTGTCATTGT +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSAHSPQ*SCWCHC
Trigger: ACAATGACACCAACAGCTTCACTGTGGACTGTGAGC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACGGCACGGAATAGTTTaGTATATTTGGGTGCCAAGT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPRHGIV*YIWVPS
Trigger: ACTTGGCACCCAAATATATCAAACTATTCCGTGCCG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAGGATGGAGTGAGTCCTaGCTCCACCACACTATCCTG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKGWSES*LHHTIL
Trigger: CAGGATAGTGTGGTGGAGTCAGGACTCACTCCATCC...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCTGCTTCACAGTTTTCTaGGCAAGGACACTCTGTCTC +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSCFTVF*ARTLCL
Trigger: GAGACAGAGTGTCCTTGCTCAGAAAACTGTGAAGCA...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAATGGCAGTGTGGTGGCTaGCAATCCCATCTCTGGCAT +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKWQCGG*QSHLWH
Trigger: ATGCCAGAGATGGGATTGTCAGCCACCACACTGCCA...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAACCATTCCTTCAAAGTaGGGCAGCCTCCCCTTACAC +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSTIPSK*GSLPLH
Trigger: GTGTAAGGGGAGGCTGCCTCACTTTGAAGGAATGGT...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTATTCAACAACACAATaGGGGAGGAAGCACCAGGCA +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLYSTTQ*GRKHQA
Trigger: TGCCTGGTGCTTCCTCCCTCATTGTGTTGTTGAATA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGAGGGGCTTCCCATCTaGTCTTACCCTCCTGTTTCA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHEGLPI*SYPPVS
Trigger: TGAAACAGGAGGGTAAGATCAGATGGGAAGCCCCTC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGGACTCAGTACAAACATaGAGAATCCTATTAGATAGA +
Preference number: 4 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGEDSVQT*RILLDR
Trigger: TCTATCTAATAGGATTCTGCATGTTTGTACTGAGTC...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAAGGTGGAGAGAGCGATaGTGTGAATCTGGAAGGGGT +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSRWRER*CESGRG
Trigger: ACCCCTTCCAGATTCACAGCATCGCTCTCTCCACCT...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCATCGTTTGAATCCACTTaGGAAGAATCCTCCAAAGGG +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPSFEST*EESSKG
Trigger: CCCTTTGGAGGATTCTTCGCAAGTGGATTCAAACGA...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATTGGCCAAAGTCAGGATaGCTCTCACCCACCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHWPKSG*LSPTSS
Trigger: AGAACTGGTGGGTGAGAGGCATCCTGACTTTGGCCA...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGACACAAGGTGGCAGTaGTCTCCTAGCTACCTGACA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHDTRWQ*SPSYLT
Trigger: TGTCAGGTAGCTAGGAGAGCACTGCCACCTTGTGTC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATATGTTAAGGTTGGCGTaGTTCTCTCGGAGGGACCCA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHMLRLA*FSRRDP
Trigger: TGGGTCCCTCCGAGAGAAGCACGCCAACCTTAACAT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCATACAGGGAACTGCTaGAGGCTCCTGAGCTATGTG +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHHTGNC*RLLSYV
Trigger: CACATAGCTCAGGAGCCTGCAGCAGTTCCCTGTATG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGAAACTGACCAGAAATaGTCTGCCCTGTCACAGAGG +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSETDQK*SALSQR
Trigger: CCTCTGTGACAGGGCAGAGCATTTCTGGTCAGTTTC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAACCGAAAAAGAGGCCCTaGAGAGTGATGCATCCTGCC +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKPKKRP*RVMHPA
Trigger: GGCAGGATGCATCACTCTCCAGGGCCTCTTTTTCGG...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTTATATGGACACAAGGTaGCAGTGCTCTCCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPYMDTR*QCSPSY
Trigger: GTAGCTAGGAGAGCACTGCCACCTTGTGTCCATATA...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAAGTGTGCAAGAAAGGTaGGCCCAGATATGTTACTCT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPSVQER*AQICYS
Trigger: AGAGTAACATATCTGGGCCCACCTTTCTTGCACACT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCATTAAAAACTGGAAGCTaGGCAGCTGCGTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSLKTGS*AAACRV
Trigger: CACCCTGCACGCAGCTGCCCAGCTTCCAGTTTTTAA...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAACATGAAGCTCCAGATTaGCTGCGTCATAAGGATGTG +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKHEAPD*LRHKDV
Trigger: CACATCCTTATGACGCAGCCAATCTGGAGCTTCATG...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 72 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATaGGGAGTAGCTCCGAAAAAGAGGCCCTGGAGAGTG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVE*GVAPKKRPWRV
Trigger: CACTCTCCAGGGCCTCTTTTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCATTTCCAGCCAATGACTaGCTGGATCACCCCAGGAAT +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSFPAND*LDHPRN
Trigger: ATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGAAA...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAGAGAGAGCGATGCTGTaGATCTGGAAGGGGTACATC +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKERAML*IWKGYI
Trigger: GATGTACCCCTTCCAGATTCACAGCATCGCTCTCTC...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATGGCGATGTATACATTaGCAAAGGTGGCCATCAGAT +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKWRCIH*QRWPSD
Trigger: ATCTGATGGCCACCTTTGTCAATGTATACATCGCCA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAAAGATGTGGAGCTGCTaGTCTGGCCGTAAAGTCAGG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKKMWSC*SGRKVR
Trigger: CCTGACTTTACGGCCAGATCAGCAGCTCCACATCTT...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAACCTTTGTCGATCAGATaGGACCGCAGCGTGTTGAAG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKPLSIR*DRSVLK
Trigger: CTTCAACACGCTGCGGTCTCATCTGATCGACAAAGG...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTCCAGTTCTTCCATCTTaGAGACAAGTTGGAAAGGGC +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSPVLPS*RQVGKG
Trigger: GCCCTTTCCAACTTGTCTTCAAGATGGAAGAACTGG...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAACAGCTGCGTGCAGGGTaGTCAAGGGAAAAGGAAGTT +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKQLRAG*SREKEV
Trigger: AACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTG...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACATGAGTCACCCATTTaGGTCTTTGCTAACCTAGAA +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPHESPI*VFANLE
Trigger: TTCTAGGTTAGCAAAGACTCAAATGGGTGACTCATG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGAGGTGGCTATGTGGATaGTTATCGGCAAACACAGTT +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLRWLCG*LSANTV
Trigger: AACTGTGTTTGCCGATAATCATCCACATAGCCACCT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAGGAATGTTGTACTCCTaGAGGCGAAACAGGTCCGAG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKGMLYS*RRNRSE
Trigger: CTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCC...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAAGAAGGCAACCCTTCTaGAGCTCCAAGCAGGGATTT +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSRRQPF*SSKQGF
Trigger: AAATCCCTGCTTGGAGCTGCAGAAGGGTTGCCTTCT...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGCTCTCACTGTCCGATaGAGTCTCTCCATCTACCTT +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSALTVR*SLSIYL
Trigger: AAGGTAGATGGAGAGACTGCATCGGACAGTGAGAGC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAAGCACTAGACCAAGGTaGAGAAGCAAATCATTACAC +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPSTRPR*RSKSLH
Trigger: GTGTAATGATTTGCTTCTGCACCTTGGTCTAGTGCT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATAGAGGGAAGGAAAGCTaGAACACCTCGGTGTACTCA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHRGKES*NTSVYS
Trigger: TGAGTACACCGAGGTGTTGCAGCTTTCCTTCCCTCT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTAAGAATACGGGGCTCTaGCTGAGTATTAGCCATCAT +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPKNTGL*LSISHH
Trigger: ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGAAGGCCAGAGCCCTGTaGACAGAGGATTTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLKARAL*TEDLKE
Trigger: TTCTTTTAAATCCTCTGTGCACAGGGCTCTGGCCTT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATCTACACACCGAGAACTaGTTCAAGGTCGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHLHTEN*FKVACV
Trigger: GACACAGGCGACCTTGAAGCAGTTCTCGGTGTGTAG...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAAAGGAAATGAACCGGTaGTATTTACTGAGAATCCGC +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPKEMNR*YLLRIR
Trigger: GCGGATTCTCAGTAAATACCACCGGTTCATTTCCTT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCATAGAAGGCTTACCTaGTTAGTAAGCCTCCATTCC +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSHRRLT*LVSLHS
Trigger: GGAATGGAGGCTTACTAACCAGGTAAGCCTTCTATG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCAAACACACAGTTAGGTaGACCTACAGGAGACATTGG +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSKHTVR*TYRRHW
Trigger: CCAATGTCTCCTGTAGGTCCACCTAACTGTGTGTTT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGACAGAGGTGGCTATGTaGATGATTATCGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLTEVAM*MIIGKH
Trigger: GTGTTTGCCGATAATCATCCACATAGCCACCTCTGT...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATGCCAAGTTGGGAAAATaGCACAGCAGTAGCGCACAG +
Preference number: 4 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHAKLGK*HSSSAQ
Trigger: CTGTGCGCTACTGCTGTGCCATTTTCCCAACTTGGC...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTAGTGAAACGCCAAGTTaGGAAAATGGCACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPSETPS*ENGTAV
Trigger: TACTGCTGTGCCATTTTCCCAACTTGGCGTTTCACT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGGAGAAGCCACGAGGCTaGAATGGAAATAAAAGTTCA +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLEKPRG*NGNKSS
Trigger: TGAACTTTTATTTCCATTTCAGCCTCGTGGCTTCTC...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCCTGACTTGTTCTCCTaGCTCCTAGTCCTTTGGTTT +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHPDLFS*LLVLWF
Trigger: AAACCAAAGGACTAGGAGTCAGGAGAACAAGTCAGG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGGATTTTGGTGTGGATaGATAGAAGGCTTACCTGGT +
Preference number: 4 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSGFWCG*IEGLPG
Trigger: ACCAGGTAAGCCTTCTATGCATCCACACCAAAATCC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAAGCTTACTTACATTCTaGAGGATTTTGGTGTGGATG +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPSLLTF*RILVWM
Trigger: CATCCACACCAAAATCCTGCAGAATGTAAGTAAGCT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAAAGGAGCCCACCATATaGCCACAATGGGACAAAAGA +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSKEPTI*PQWDKR
Trigger: TCTTTTGTCCCATTGTGGGCATATGGTGGGCTCCTT...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCAAACCCTTAGCACTATaGCTGGCACATATTAAGCAC +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSKPLAL*LAHIKH
Trigger: GTGCTTAATATGTGCCAGGCATAGTGCTAAGGGTTT...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCACATGTATGCACATTCTaGCTGCTAGAAAACATTCTC +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPHVCTF*LLENIL
Trigger: GAGAATGTTTTCTAGCAGGCAGAATGTGCATACATG...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATAACATGGATCACGAGTaGACAGAGAGAGAGATCAGC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHNMDHE*TEREIS
Trigger: GCTGATCTCTCTCTCTGTGCACTCGTGATCCATGTT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAGGACAGCTTGATGAGTaGGGTCCGACCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSGQLDE*GPTKEK
Trigger: TTTTTCTTTGGTCGGACCCCACTCATCAAGCTGTCC...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAACAGCCAATGACTGACTaGATCACCCCAGGAATGTTG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKQPMTD*ITPGML
Trigger: CAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTG...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAGTGGCCATCAGATACTaGCAGTCAAAGCGATCCATG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKVAIRY*QSKRSM
Trigger: CATGGATCGCTTTGACTGCCAGTATCTGATGGCCAC...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCTGAATCAGTTTGCTTaGGTTAGGGCCTCTGATAAA +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSLNQFA*VRASDK
Trigger: TTTATCAGAGGCCCTAACCCAAGCAAACTGATTCAG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTAAACATTGTGCTATATaGACACAAGGTGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPKHCAI*TQGGSA
Trigger: AGCACTGCCACCTTGTGTCCATATAGCACAATGTTT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGCACTCAAAGTGCGTTaGGAAACATGGTCCCTATAC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHALKVR*ETWSLY
Trigger: GTATAGGGACCATGTTTCCCAACGCACTTTGAGTGC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAACACTTTACAAAGGGGTaGGAGGCACCATGGAGAAAC +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKHFTKG*EAPWRN
Trigger: GTTTCTCCATGGTGCCTCCCACCCCTTTGTAAAGTG...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAACCGGTGGTATTTACTaGGAATCCGCAAAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKTGGIY*ESAKAL
Trigger: AAGAGCCTTTGCGGATTCTCAGTAAATACCACCGGT...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGAAGATATGGGGACAATaGACCAGATCATTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLKIWGQ*TRSFLQ
Trigger: TTGAAGGAATGATCTGGTTCATTGTCCCCATATCTT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TCAACTCTTCCCCTTTGTAATCAGCCCCTAGCACCCAGTCAGCATGACGTAAGATGGTTTTACAACCCGTaGCTTCTTTCCAACTCAAAG +
Preference number: 4 (lower is better)
Translates to: STLPLCNQPLAPSQHDVRWFYNP*LLSNSK
Trigger: CTTTGAGTTGGAAAGAAGTCACGGGTTGTAAAACCA...TCTTACGTCATGCTGACTGGGTGCTAGGGGCTGATTACAAAGGGGAAGAGTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGACAAAAGAGACAAATaGGGAGCCCTTTCGGTATCT +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHDKRDK*GALSVS
Trigger: AGATACCGAAAGGGCTCCTCATTTGTCTCTTTTGTC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGGCTCACTGACAGTGTaGAGATCTCAACTCAAAGAT +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHGSLTV*RSQLKD
Trigger: ATCTTTGAGTTGAGATCTTCACACTGTCAGTGAGCC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAAAGCACCCAGTCAGCATaGCGTAAGACAGAAAAACAG +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKSTQSA*RKTEKQ
Trigger: CTGTTTTTCTGTCTTACGTCATGCTGACTGGGTGCT...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATAGAGTTTGTTCCACCTaGTCTTTGGAGTCCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHRVCST*SLESSV
Trigger: AACACTGGACTCCAAAGAGCAGGTGGAACAAACTCT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTATTATCAGACCCAACTaGCTTCAAGGTAGAAGCTTA +
Preference number: 4 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPIIRPN*LQGRSL
Trigger: TAAGCTTCTACCTTGAAGGCAGTTGGGTCTGATAAT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGGGAAGTCCCCTGATTTaGTCAGACACAGATGAATGT +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRGSPLI*SDTDEC
Trigger: ACATTCATCTGTGTCTGACCAAATCAGGGGACTTCC...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATGACAAAATCACCAGGTaGCTAACCCTTCTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHDKITR*LTLLSA
Trigger: AGCACTCAGAAGGGTTAGCCACCTGGTGATTTTGTC...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 72 bp TCGTTGGCAATGAAAACATCCACGGCACGGAATAGTTaGATATATTTGGGTGCCAAGTTCTCTCTCCCGCAC +
Preference number: 4 (lower is better)
Translates to: SLAMKTSTARNS*IYLGAKFSLPH
Trigger: GTGCGGGAGAGAGAACTTGGCACCCAAATATATCAAACTATTCCGTGCCGTGGATGTTTTCATTGCCAACGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGACTCCAAAGGGGCCAATaGGCGAGGCAAAGGTGGAGA +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRLQRGQ*ARQRWR
Trigger: TCTCCACCTTTGCCTCGCTCATTGGCCCCTTTGGAG...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCACATCACTTGTTGGCCTaGCAAAGAACTAATCTGTCT +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSHHLLA*QRTNLS
Trigger: AGACAGATTAGTTCTTTGTCAGGCCAACAAGTGATG...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCACGGTATCTAGTTTGGTaGTCCAGGTTCATTCTTCAA +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSRYLVW*SRFILQ
Trigger: TTGAAGAATGAACCTGGATCACCAAACTAGATACCG...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAGTATGCTCGGCTCCCTaGTCCCAAAGGCAGCCCTAT +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRVCSAP*SQRQPY
Trigger: ATAGGGCTGCCTTTGGGATCAGGGAGCCGAGCATAC...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGGATAAGAATCCTTCGTaGCCACTTGGTTTAAACCCT +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRDKNPS*PLGLNP
Trigger: AGGGTTTAAACCAAGTGGTCACGAAGGATTCTTATC...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAGAATATGAAACAAGTTaGCTAAGAGGGTTTCACTTT +
Preference number: 4 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPEYETS*LRGFHF
Trigger: AAAGTGAAACCCTCTTAGGCAACTTGTTTCATATTC...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCTATTAATAGCAATGTaGTGTTGGGTCCCACTAATA +
Preference number: 4 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSLLIAM*CWVPLI
Trigger: TATTAGTGGGACCCAACAGCACATTGCTATTAATAG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCACTATGGATACAAGGCTaGCTAGGTCTATTCAACAAC +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSLWIQG*LGLFNN
Trigger: GTTGTTGAATAGACCTAGGCAGCCTTGTATCCATAG...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATTCTACAGCACAAACATaGATGGCATTGTCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHSTAQT*MALSLK
Trigger: TTTCAGGGACAATGCCATCCATGTTTGTGCTGTAGA...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCACACTCCATCACTTGTTaGCCTGACAAAGAACTAATC +
Preference number: 4 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSHSITC*PDKELI
Trigger: GATTAGTTCTTTGTCAGGCCAACAAGTGATGGAGTG...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 72 bp ATGAAAACATCCACGGCACGGAATAGTTTGATATATTaGGGTGCCAAGTTCTCTCTCCCGCACTCCATCACT +
Preference number: 4 (lower is better)
Translates to: MKTSTARNSLIY*GAKFSLPHSIT
Trigger: AGTGATGGAGTGCGGGAGAGAGAACTTGGCACCCAAATATATCAAACTATTCCGTGCCGTGGATGTTTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATTGGAAACACTTAATCTaGACGCACATCACGATTATC +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHWKHLI*THITII
Trigger: GATAATCGTGATGTGCGTTCAGATTAAGTGTTTCCA...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGACAAGGATGTGTGAGCTaGAACATCCCGAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRQGCVS*NIPRAP
Trigger: TGGAGCCCTCGGGATGTTTCAGCTCACACATCCTTG...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTATCATCAAAACCATTaGTCCCAGGTAAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLYHQNH*SQVNDD
Trigger: ATCATCATTTACCTGGGACCAATGGTTTTGATGATA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTCAAAGGCTGTTTTCTaGATTAAAAGGGATAACGTA +
Preference number: 4 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLSKAVF*IKRDNV
Trigger: TACGTTATCCCTTTTAATCCAGAAAACAGCCTTTGA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAGTGGTGGCAGTGTGGTaGCTGACAATCCCATCTCTG +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRVVAVW*LTIPSL
Trigger: CAGAGATGGGATTGTCAGCCACCACACTGCCACCAC...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATATGTATTGTTCAACATaGATCACGAGTGCACAGAGA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHMYCST*ITSAQR
Trigger: TCTCTGTGCACTCGTGATCCATGTTGAACAATACAT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATGTTCTTACATTGCGTaGAAAAAGAACCTACATGTA +
Preference number: 4 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKCSYIA*KKNLHV
Trigger: TACATGTAGGTTCTTTTTCCACGCAATGTAAGAACA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGATCACTCAAGGATGTGTaGGCTGAAACATCCCGAGGG +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRSLKDV*AETSRG
Trigger: CCCTCGGGATGTTTCAGCTCACACATCCTTGAGTGA...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGTTGTATCCTCCCCAATaGAAGAGATTAGTTTCAAAG +
Preference number: 4 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRLYPPQ*KRLVSK
Trigger: CTTTGAAACTAATCTCTTTCATTGGGGAGGATACAA...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATGATGATGAAGAAAAATaGAATCATGGCCAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHDDEEK*NHGQSQ
Trigger: CTGACTTTGGCCATGATTGCATTTTTCTTCATCATC...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATAGAAGCATAAAACCATaGATGGAAGTGATAAACAGG +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHRSIKP*MEVINR
Trigger: CCTGTTTATCACTTCCATGCATGGTTTTATGCTTCT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGACCTACTCGTCCTCTGTaGTGGATGTCAGCATCCCTT +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRPTRPL*WMSASL
Trigger: AAGGGATGCTGACATCCACCACAGAGGACGAGTAGG...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp ATGAACTTGCTCAGCCAGAATCACAGAAGAGTGGAATTGGGAGTAGCTCCGAAATCTTCTCCTGGTTCATaGCATTATCATTACTTCAGC +
Preference number: 4 (lower is better)
Translates to: MNLLSQNHRRVELGVAPKSSPGS*HYHYFS
Trigger: GCTGAAGTAATGATAATGCCATGAACCAGGAGAAGA...TTTCGGAGCTACTCCCAATTCCACTCTTCTGTGATTCTGGCTGAGCAAGTTCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATACAACCATCTTCTCCTaGTTCATGGCATTATCATTA +
Preference number: 4 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHTTIFS*FMALSL
Trigger: TAATGATAATGCCATGAACCAGGAGAAGATGGTTGT...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR TCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAATACGGGGCTCTGCCTaGGTATTAGCCATCATCTTC +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRIRGSA*VLAIIF
Trigger: GAAGATGATGGCTAATACTCAGGCAGAGCCCCGTAT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAGCTAACCCTTCTGAGTaGTTTATGCAGGCAAGGTCC +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRANPSE*FMQARS
Trigger: GGACCTTGCCTGCATAAAGCACTCAGAAGGGTTAGC...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAACTCGTCCTCTGTGGTaGATGTCAGCATCCCTTTGT +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRTRPLW*MSASLC
Trigger: ACAAAGGGATGCTGACATCCACCACAGAGGACGAGT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAGTTAAGAGGGCAGCATaGGCACACACAAAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRVKRAA*AHTKGK
Trigger: TTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAAC...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAAAACTGCACTCAAAGTaGGTTGGGAAACATGGTCCC +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRKLHSK*VGKHGP
Trigger: GGGACCATGTTTCCCAACGCACTTTGAGTGCAGTTT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAGATGAACCTGAGCTTTaGGAAACATGGTCCCCATAC +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRDEPEL*ETWSPY
Trigger: GTATGGGGACCATGTTTCCCAAAGCTCAGGTTCATC...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGATGCAGGATTTTGGTGTaGATGCATAGAAGGCTTACC +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRCRILV*MHRRLT
Trigger: GGTAAGCCTTCTATGCATCCACACCAAAATCCTGCA...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGATGCGTCATAAGGATGTaGGCAGAACTTCTAGGCTTT +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRCVIRM*AELLGF
Trigger: AAAGCCTAGAAGTTCTGCCCACATCCTTATGACGCA...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
3UTR CAA 72 bp GACCATTATTTCCATACTATTAATAGCAATGTGCTGTaGGGTCCCACTAATACCCAGGAAATAATCCACAGT +
Preference number: 4 (lower is better)
Translates to: DHYFHTINSNVL*GPTNTQEIIHS
Trigger: ACTGTGGATTATTTCCTGGGTATTAGTGGGACCCAACAGCACATTGCTATTAATAGTATGGAAATAATGGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR GCA 90 bp TTCTTACATTGCGTGGAAAAAGAACCTACATGTATTGTTCAACATGGATCACGAAGACTTCACAAACTCTaGCCCTCTATTCTCATAAAT +
Preference number: 4 (lower is better)
Translates to: FLHCVEKEPTCIVQHGSRRLHKL*PSILIN
Trigger: ATTTATGAGAATAGAGGGGCAGAGTTTGTGAAGTCT...TCGTGATCCATGTTGAACAATACATGTAGGTTCTTTTTCCACGCAATGTAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS CCA 90 bp CCCACCAGTTCTTCCATCTTGTCCTCGGGTGGCGCAACCGGCTCATaGGCCACCCTCTGCCTCAGCTCTGTCATCCTGGGAAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: PTSSSILSSGGATGS*ATLCLSSVILGKSA
Trigger: GGCCGATTTTCCCAGGATGACAGAGCTGAGGCAGAGGGTGGCCCATGAGCCGGTTGCGCCACCCGAGGACAAGATGGAAGAACTGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000450570.1
ENST00000467923.5
CDS CCA 90 bp GCTTCTGACTCTGACTCCTTGTCCTCGGGTGGCGCAACCGGCTCATaGGCCACCCTCTGCCTCAGCTCTGTCATCCTGGGAAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: ASDSDSLSSGGATGS*ATLCLSSVILGKSA
Trigger: GGCCGATTTTCCCAGGATGACAGAGCTGAGGCAGAGGGTGGCCCATGAGCCGGTTGCGCCACCCGAGGACAAGGAGTCAGAGTCAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000460006.6
ENST00000486875.1
CDS-3UTR CAA 90 bp CAGGAGGAGATGGCCTTCCCACAAGCAGTCCAGACTGTGGGCAGAGGAGGTGAGTCACACCAGCTGGGCTaGCCTTGGAGACCTGCCCCT +
Preference number: 5 (lower is better)
Translates to: QEEMAFPQAVQTVGRGGESHQLG*PWRPAP
Trigger: AGGGGCAGGTCTCCAAGGCAAGCCCAGCTGGTGTGA...CTCACCTCCTCTGCCCACAGTCTGGACTGCTTGTGGGAAGGCCATCTCCTCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS CCA 90 bp GGAAAGGGCCCTATTGAGGACCTCCGGGGTATCATCTGCAGAGACTaGCAGGGGTGCGGATTCTGCCCGGCTCTCACTGTCCGATGCAGT +
Preference number: 5 (lower is better)
Translates to: GKGPIEDLRGIICRD*QGCGFCPALTVRCS
Trigger: ACTGCATCGGACAGTGAGAGCCGGGCAGAATCCGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS CCA 90 bp GTGGACCCTCCAATTATCTTGTCCTCGGGTGGCGCAACCGGCTCATaGGCCACCCTCTGCCTCAGCTCTGTCATCCTGGGAAAATCGGCC +
Preference number: 5 (lower is better)
Translates to: VDPPIILSSGGATGS*ATLCLSSVILGKSA
Trigger: GGCCGATTTTCCCAGGATGACAGAGCTGAGGCAGAGGGTGGCCCATGAGCCGGTTGCGCCACCCGAGGACAAGATAATTGGAGGGTCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS GCA 90 bp CCTATTGAGGACCTCCGGGGTATCATCTGCAGAGACTGGCAGGGGTaGGGATTCTGCCCGGCTCTCACTGTCCGATGCAGTCTCTCCATC +
Preference number: 5 (lower is better)
Translates to: PIEDLRGIICRDWQG*GFCPALTVRCSLSI
Trigger: GATGGAGAGACTGCATCGGACAGTGAGAGCCGGGCAGAATCCGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS TCA 90 bp CCATGGAGGCCGCTCACCCCCTGTGAGTGGCACATACCCAGCCAATaGCTGACTGGATCACCCCAGGAATGTTGTACTCCTGCAGGCGAA +
Preference number: 5 (lower is better)
Translates to: PWRPLTPCEWHIPSQ*LTGSPQECCTPAGE
Trigger: TTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGGTATGTGCCACTCACAGGGGGTGAGCGGCCTCCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS GCA 90 bp AGACAAGTTGGAAAGGGCCCTATTGAGGACCTCCGGGGTATCATCTaGAGAGACTGGCAGGGGTGCGGATTCTGCCCGGCTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: RQVGKGPIEDLRGII*RDWQGCGFCPALTV
Trigger: GACAGTGAGAGCCGGGCAGAATCCGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAACTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS-3UTR CAA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTAGCACCCCATGCAGGTaGTGGCACAAGGCCCCCACC +
Preference number: 5 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPSTPCR*WHKAPT
Trigger: GGTGGGGGCCTTGTGCCACAACCTGCATGGGGTGCT...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS TCA 90 bp CCCACCAGTTCTTCCATCTTGAAGACAAGTTGGAAAGGGCCCTATTaGGGACCTCCGGGGTATCATCTGCAGAGACTGGCAGGGGTGCGG +
Preference number: 5 (lower is better)
Translates to: PTSSSILKTSWKGPY*GPPGYHLQRLAGVR
Trigger: CCGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAACTTGTCTTCAAGATGGAAGAACTGGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS GCA 90 bp ACCCAGCCAATGACTGACTGGATCACCCCAGGAATGTTGTACTCCTaGAGGCGAAACAGGTCCGAGGGCTCACAGTCCACAGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: TQPMTDWITPGMLYS*RRNRSEGSQSTVKL
Trigger: CAGCTTCACTGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS-3UTR CAA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTGGGGCAAGCCTGGGATaGGCCTGTCACAGCAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSGASLG*ACHSSC
Trigger: GCAGCTGCTGTGACAGGCCAATCCCAGGCTTGCCCC...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS TCA 90 bp ACCGATGATCCTCAGCTCCAGCCAACCATTGAGCAGGTGACAAAGTaGTGGTGGACCCTCCAATTATCTTGTCCTCGGGTGGCGCAACCG +
Preference number: 5 (lower is better)
Translates to: TDDPQLQPTIEQVTK*WWTLQLSCPRVAQP
Trigger: CGGTTGCGCCACCCGAGGACAAGATAATTGGAGGGTCCACCATCACTTTGTCACCTGCTCAATGGTTGGCTGGAGCTGAGGATCATCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS GCA 90 bp TTCCAGCCAATGACTGACTGGATCACCCCAGGAATGTTGTACTCCTaGAGGCGAAACAGGTCCGAGGGCTCACAGTCCACAGTGAAGCTG +
Preference number: 5 (lower is better)
Translates to: FQPMTDWITPGMLYS*RRNRSEGSQSTVKL
Trigger: CAGCTTCACTGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS-3UTR CAA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGCCAGCTGGGCTTGCCTaGGAGACCTGCCCCTGCTCA +
Preference number: 5 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRPAGLA*ETCPCS
Trigger: TGAGCAGGGGCAGGTCTCCAAGGCAAGCCCAGCTGG...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGTGCACTCAAAGTGCGTaGGGAAACATGGTCCCTATA +
Preference number: 5 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWCTQSA*GNMVPI
Trigger: TATAGGGACCATGTTTCCCAACGCACTTTGAGTGCA...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS TCA 90 bp TGTACTCCTGCAGGCGAAACAGGTCCGAGGGCTCACAGTCCACAGTaGAGCTGTTGGTGTCATTGTTGTACTCCACAGGGCAGACAAAGC +
Preference number: 5 (lower is better)
Translates to: CTPAGETGPRAHSPQ*SCWCHCCTPQGRQS
Trigger: GCTTTGTCTGCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS CCA 90 bp AACAATCTGATGTTGGGGGAAAGCTGTCCTGCCCATACCCTGACCTaGCGTGAGCAATTCTCCTTCATCCTGGGGCTTACAGCTTTGGGA +
Preference number: 5 (lower is better)
Translates to: NNLMLGESCPAHTLT*REQFSFILGLTALG
Trigger: TCCCAAAGCTGTAAGCCCCAGGATGAAGGAGAATTGCTCACGCCAGGTCAGGGTATGGGCAGGACAGCTTTCCCCCAACATCAGATTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CCA 90 bp ACCCTCCAGGTGGCTACTGAGAAGTGGGAAGTCACAGATGTTCTATaGCAGAGGTTTTCTGAGAAGCCTGGACCCCCGTCAATTCCCACA +
Preference number: 5 (lower is better)
Translates to: TLQVATEKWEVTDVL*QRFSEKPGPPSIPT
Trigger: TGTGGGAATTGACGGGGGTCCAGGCTTCTCAGAAAACCTCTGCCATAGAACATCTGTGACTTCCCACTTCTCAGTAGCCACCTGGAGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486875.1
CDS-3UTR CAA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATTCTGACTCTGACTCCTaGTCCTCGGGTGGCGCAACC +
Preference number: 5 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHSDSDS*SSGGAT
Trigger: GGTTGCGCCACCCGAGGACAAGGAGTCAGAGTCAGA...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATTGGAAAGGGCCCTATaGAGGACCTCCGGGGTATCA +
Preference number: 5 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKLERAL*RTSGVS
Trigger: TGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS TCA 90 bp TGGATGTCAGCATCCCTTTGTCGATCAGATGAGACCGCAGCGTGTTaGAGATGTGGAGCTGCTGATCTGGCCGTAAAGTCAGGAACTGCT +
Preference number: 5 (lower is better)
Translates to: WMSASLCRSDETAAC*RCGAADLAVKSGTA
Trigger: AGCAGTTCCTGACTTTACGGCCAGATCAGCAGCTCCACATCTTCAACACGCTGCGGTCTCATCTGATCGACAAAGGGATGCTGACATCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS GCA 90 bp GTCTCCCTAATGTCCGTTGCGTCCAGTCATCAAAAAGTTACAGGCTaGATTAGGGGAAGCCGTGAGCCTGGTGTAAGGCAACAGGGATTG +
Preference number: 5 (lower is better)
Translates to: VSLMSVASSHQKVTG*IRGSREPGVRQQGL
Trigger: CAATCCCTGTTGCCTTACACCAGGCTCACGGCTTCCCCTAATGCAGCCTGTAACTTTTTGATGACTGGACGCAACGGACATTAGGGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS-3UTR CAA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCATTCTTCGGGGACAGCTaGATGAGTGGGGTCCGACCA +
Preference number: 5 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSFFGDS*MSGVRP
Trigger: TGGTCGGACCCCACTCATCAAGCTGTCCCCGAAGAA...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGATCACCCCAGGAATGTaGTACTCCTGCAGGCGAAAC +
Preference number: 5 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLITPGM*YSCRRN
Trigger: GTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGAT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGGACCTACAGGAGACATaGGAGCCTAGACATGTGGGA +
Preference number: 5 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLDLQET*EPRHVG
Trigger: TCCCACATGTCTAGGCTCCAATGTCTCCTGTAGGTC...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAATCCCATCTCTGGCATaGCACCAACGGAGGTCAAAC +
Preference number: 5 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKIPSLA*HQRRSN
Trigger: GTTTGACCTCCGTTGGTGCAATGCCAGAGATGGGAT...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCATCATCTTCAGGCCAGAGTTTGTTCCACCTGCTCTTTGGAGTCCAGTGTTCCCTGACTCCTAGTCCTTaGGTTTCATCGGCCCCTGAT +
Preference number: 5 (lower is better)
Translates to: PSSSGQSLFHLLFGVQCSLTPSP*VSSAPD
Trigger: ATCAGGGGCCGATGAAACCAAAGGACTAGGAGTCAG...GGAACACTGGACTCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGATGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp GTTAAGGTTGGCGTGCTTCTCTCGGAGGGACCCAGACTGTGTGCAGGGTGGTGGAAGAACCTACATGTATaGTTCAACATGGATCACGAG +
Preference number: 5 (lower is better)
Translates to: VKVGVLLSEGPRLCAGWWKNLHV*FNMDHE
Trigger: CTCGTGATCCATGTTGAACAATACATGTAGGTTCTT...CCACCACCCTGCACACAGTCTGGGTCCCTCCGAGAGAAGCACGCCAACCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAAAGCTGTTGGTGTCATaGTTGTACTCCACAGGGCAG +
Preference number: 5 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKKLLVS*LYSTGQ
Trigger: CTGCCCTGTGGAGTACAACAATGACACCAACAGCTT...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAAGTTGAAGCCTCGTCATaGTCTAAGTCACACCAGCTG +
Preference number: 5 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKVEASS*SKSHQL
Trigger: CAGCTGGTGTGACTTAGACAATGACGAGGCTTCAAC...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCATCTCTCCATCTACCTTaGCTTCTGACTCTGACTCCT +
Preference number: 5 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPSLHLP*LLTLTP
Trigger: AGGAGTCAGAGTCAGAAGCAAAGGTAGATGGAGAGA...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCCTGTTCAAGTGAAATaGTCCTCCCAACTCCACCCT +
Preference number: 5 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLPVQVK*SSQLHP
Trigger: AGGGTGGAGTTGGGAGGACAATTTCACTTGAACAGG...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTGTTCCACCTGCTCTTaGGAGTCCAGTGTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLCSTCS*ESSVPK
Trigger: CTTTGGAACACTGGACTCCAAAGAGCAGGTGGAACA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGTCTTCAGGCCAGAGTTaGTTCCACCTGCTCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLSSGQS*FHLLFG
Trigger: TCCAAAGAGCAGGTGGAACAAACTCTGGCCTGAAGA...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS GCA 90 bp CCTCCTAGTGTAACTGCTCTGTTGACATCCTGTCACCAAATCTTGTaGTTTCTTCCTTCTGGGTGTCTCCCTAATGTCCGTTGCGTCCAG +
Preference number: 5 (lower is better)
Translates to: PPSVTALLTSCHQIL*FLPSGCLPNVRCVQ
Trigger: CTGGACGCAACGGACATTAGGGAGACACCCAGAAGGAAGAAAGCACAAGATTTGGTGACAGGATGTCAACAGAGCAGTTACACTAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CCA 90 bp AACAACCAGCCTACACCAATGACCCTCCAGGTGGCTACTGAGAAGTaGGAAGTCACAGATGTTCTATGGCAGAGGTTTTCTGAGAAGCCT +
Preference number: 5 (lower is better)
Translates to: NNQPTPMTLQVATEK*EVTDVLWQRFSEKP
Trigger: AGGCTTCTCAGAAAACCTCTGCCATAGAACATCTGTGACTTCCCACTTCTCAGTAGCCACCTGGAGGGTCATTGGTGTAGGCTGGTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486875.1
CDS-3UTR CAA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTCTGTTGGTGTCATTGTaGTACTCCACAGGGCAGACA +
Preference number: 5 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSLLVSL*YSTGQT
Trigger: TGTCTGCCCTGTGGAGTACAACAATGACACCAACAG...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAATCCACAGTGAAGCTGTaGGTGTCATTGTTGTACTCC +
Preference number: 5 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKSTVKL*VSLLYS
Trigger: GGAGTACAACAATGACACCAACAGCTTCACTGTGGA...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCTGGCGATGTATACATaGACAAAGGTGGCCATCAGA +
Preference number: 5 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLLAMYT*TKVAIR
Trigger: TCTGATGGCCACCTTTGTCAATGTATACATCGCCAG...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTTACCTGGTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCATCTTGAAGACAAGTaGGAAAGGGCCCTATTGAGG +
Preference number: 5 (lower is better)
Translates to: LTWLVSLHSSDLQKATLLHLEDK*ERALLR
Trigger: CCTCAATAGGGCCCTTTCCAACTTGTCTTCAAGATG...CAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAACCAGGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp GTTAGTAAGCCTCCATTCCTCCGACCTACAGAAGGCAACCCTTCTGCAGCTCCAACGGCACGGAATAGTTaGATATATTTGGGTGCCAAG +
Preference number: 5 (lower is better)
Translates to: VSKPPFLRPTEGNPSAAPTARNS*IYLGAK
Trigger: CTTGGCACCCAAATATATCAAACTATTCCGTGCCGT...TGGAGCTGCAGAAGGGTTGCCTTCTGTAGGTCGGAGGAATGGAGGCTTACTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTTCTACCGGCATGAACTaGCTCAGCCAGAATCACAGA +
Preference number: 5 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSSTGMN*LSQNHR
Trigger: TCTGTGATTCTGGCTGAGCAAGTTCATGCCGGTAGA...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCGCTTCAGCCCCACACACATATGGGAAGTCACTCAAGGATGTGTGAGCTGAAACCGCGGCTTACTGTCTaGCAATGTGTCCATAAAAGT +
Preference number: 5 (lower is better)
Translates to: PLQPHTHMGSHSRMCELKPRLTV*QCVHKS
Trigger: ACTTTTATGGACACATTGCAAGACAGTAAGCCGCGG...TTTCAGCTCACACATCCTTGAGTGACTTCCCATATGTGTGTGGGGCTGAAGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGATCATTACACCCTCGTaGGCAATGAAAACATCCACG +
Preference number: 5 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLIITPS*AMKTST
Trigger: CGTGGATGTTTTCATTGCCAACGAGGGTGTAATGAT...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp AAAACTGGAAGCTGGGCAGCTGCGTGCAGGGTGATCAAGGGAAAAGGAAGTTTGCAAAGCAGGTTTCTGTaGTCCCCATTCTTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: KTGSWAAACRVIKGKGSLQSRFL*SPFFSS
Trigger: AGAAGAGAAGAATGGGGACAACAGAAACCTGCTTTG...CAAACTTCCTTTTCCCTTGATCACCCTGCACGCAGCTGCCCAGCTTCCAGTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATTCAGTAGGTAGGCATTaGATGGGAAAAGGAAGGGGA +
Preference number: 5 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHSVGRH*MGKGRG
Trigger: TCCCCTTCCTTTTCCCATCAAATGCCTACCTACTGA...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp ATAAAAGTTCAGCGGAAAGAAGCCGCTTCAGCCCCACACACATATGGGAAGTCAAATAGCAATGTGCTGTaGGGTCCCACTAATACCCAG +
Preference number: 5 (lower is better)
Translates to: IKVQRKEAASAPHTYGKSNSNVL*GPTNTQ
Trigger: CTGGGTATTAGTGGGACCCAACAGCACATTGCTATT...TGACTTCCCATATGTGTGTGGGGCTGAAGCGGCTTCTTTCCGCTGAACTTTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS TCA 90 bp CAGGAGAAAGTACCAGCTGAGCGTCCTGAACCAGGGCAGATCATATaGGTGGTAGACGTTGTAGCCAATAGTGATTATCTCATGGAAACA +
Preference number: 5 (lower is better)
Translates to: QEKVPAERPEPGQII*VVDVVANSDYLMET
Trigger: TGTTTCCATGAGATAATCACTATTGGCTACAACGTCTACCACTCATATGATCTGCCCTGGTTCAGGACGCTCAGCTGGTACTTTCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000379070.3
ENST00000450570.1
ENST00000460006.6
ENST00000467923.5
ENST00000468817.5
CDS-3UTR CAA 90 bp AAGCAGTTAAGAGGGCAGCATGCGCACACACAAAAGGCAAAGACTCGGTACCCTTGGCCAGGAATGGTATaGGCAAAGTCTTTGATTTTA +
Preference number: 5 (lower is better)
Translates to: KQLRGQHAHTQKAKTRYPWPGMV*AKSLIL
Trigger: TAAAATCAAAGACTTTGCCAATACCATTCCTGGCCA...AGGGTACCGAGTCTTTGCCTTTTGTGTGTGCGCATGCTGCCCTCTTAACTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CTGAGCAAGGACACTCTGTCTCAAGTCACTTATACTCTCCCACTACCCGACTCTACTACAGTTTCGTTATaGATCACCTTTACTGTTCGG +
Preference number: 5 (lower is better)
Translates to: LSKDTLSQVTYTLPLPDSTTVSL*ITFTVR
Trigger: CCGAACAGTAAAGGTGATCAATAACGAAACTGTAGT...AGAGTCGGGTAGTGGGAGAGTATAAGTGACTTGAGACAGAGTGTCCTTGCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp GTTTTGACCAAGTCAGGGAAGAATACGGGGCTCTGCCTGAGTATTAGCCATCATCTTTCGGTATCTAGTTaGGTGATCCAGGTTCATTCT +
Preference number: 5 (lower is better)
Translates to: VLTKSGKNTGLCLSISHHLSVSS*VIQVHS
Trigger: AGAATGAACCTGGATCACCAAACTAGATACCGAAAG...ATGATGGCTAATACTCAGGCAGAGCCCCGTATTCTTCCCTGACTTGGTCAAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGATTTTAAAGGCTCGTTaGAATCCACTTGCGAAGAAT +
Preference number: 5 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRILKAR*NPLAKN
Trigger: ATTCTTCGCAAGTGGATTCAAACGAGCCTTTAAAAT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp AAACATGAAGCTCCAGATTGGCTGCGTCATAAGGATGTGGGCAGAACTTCTAGGAATAGTTTGATATATTaGGGTGCCAAGTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: KHEAPDWLRHKDVGRTSRNSLIY*GAKFSL
Trigger: GAGAGAGAACTTGGCACCCAAATATATCAAACTATT...CCTAGAAGTTCTGCCCACATCCTTATGACGCAGCCAATCTGGAGCTTCATGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS GCA 90 bp TATCATCAAAACCATTGGTCCCAGGTAAATGATGATGAAGAAAAATaGAATCATGGCCAAAGTCAGGATGCCTCTCACCCACCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: YHQNHWSQVNDDEEK*NHGQSQDASHPPVL
Trigger: AAGAACTGGTGGGTGAGAGGCATCCTGACTTTGGCCATGATTGCATTTTTCTTCATCATCATTTACCTGGGACCAATGGTTTTGATGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000450570.1
ENST00000460006.6
ENST00000467923.5
ENST00000468817.5
ENST00000486875.1
CDS-3UTR CAA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATATTCCTTCAAATAGGTaGTGGATAACAAGATGTGAC +
Preference number: 5 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHIPSNR*WITRCD
Trigger: GTCACATCTTGTTATCCACAACCTATTTGAAGGAAT...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATGTATTGGCAAAGTCTTaGATTTTAAAGGCTCGTTTG +
Preference number: 5 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHVLAKS*ILKARL
Trigger: CAAACGAGCCTTTAAAATCAAAGACTTTGCCAATAC...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS-3UTR CAA 90 bp CCTTTACTGTTCGGGTGTGCTGCTGAGATACCTACTCACCTTAAGGATAAGCATTATCATGTTCTTACATaGCGTGGAAAAAGAACCTAC +
Preference number: 5 (lower is better)
Translates to: PLLFGCAAEIPTHLKDKHYHVLT*RGKRTY
Trigger: GTAGGTTCTTTTTCCACGCAATGTAAGAACATGATA...ATGCTTATCCTTAAGGTGAGTAGGTATCTCAGCAGCACACCCGAACAGTAAAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460006.6
CDS CCA 90 bp CAAGATATGGGGACAATGAACCAGATCATTCCTTCAAATAGGTTGTaGATAACAAGATGTGACTGTGTTACAACAATCAGCAATGTCACA +
Preference number: 5 (lower is better)
Translates to: QDMGTMNQIIPSNRL*ITRCDCVTTISNVT
Trigger: TGTGACATTGCTGATTGTTGTAACACAGTCACATCTTGTTATCCACAACCTATTTGAAGGAATGATCTGGTTCATTGTCCCCATATCTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379070.3
ENST00000450570.1
ENST00000460006.6
ENST00000468817.5
CDS CCA 90 bp AATCCAACTCCCAATTCTCACCAGATCATTCCTTCAAATAGGTTGTaGATAACAAGATGTGACTGTGTTACAACAATCAGCAATGTCACA +
Preference number: 5 (lower is better)
Translates to: NPTPNSHQIIPSNRL*ITRCDCVTTISNVT
Trigger: TGTGACATTGCTGATTGTTGTAACACAGTCACATCTTGTTATCCACAACCTATTTGAAGGAATGATCTGGTGAGAATTGGGAGTTGGATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467923.5
CDS GCA 72 bp GACCTCCGGGGTATCATCTGCAGAGACTGGCAGGGGTaGGGATTCTGCCCGGCTCTCACTGTCCGATGCAGT +
Preference number: 6 (lower is better)
Translates to: DLRGIICRDWQG*GFCPALTVRCS
Trigger: ACTGCATCGGACAGTGAGAGCCGGGCAGAATCCGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS GCA 72 bp GGAAAGGGCCCTATTGAGGACCTCCGGGGTATCATCTaGAGAGACTGGCAGGGGTGCGGATTCTGCCCGGCT +
Preference number: 6 (lower is better)
Translates to: GKGPIEDLRGII*RDWQGCGFCPA
Trigger: AGCCGGGCAGAATCCGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS CCA 72 bp AGTGATGGTGGACCCTCCAATTATCTTGTCCTCGGGTaGCGCAACCGGCTCATGGGCCACCCTCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: SDGGPSNYLVLG*RNRLMGHPLPQ
Trigger: CTGAGGCAGAGGGTGGCCCATGAGCCGGTTGCGCCACCCGAGGACAAGATAATTGGAGGGTCCACCATCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS GCA 72 bp GGTATCATCTGCAGAGACTGGCAGGGGTGCGGATTCTaGCCGGCTCTCACTGTCCGATGCAGTCTCTCCATC +
Preference number: 6 (lower is better)
Translates to: GIICRDWQGCGF*PALTVRCSLSI
Trigger: GATGGAGAGACTGCATCGGACAGTGAGAGCCGGGCAGAATCCGCACCCCTGCCAGTCTCTGCAGATGATACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS CCA 72 bp TCCTGGCCCTGGGTGGCCCCTACTCGTCCTCTGTGGTaGATGTCAGCATCCCTTTGTCGATCAGATGAGACC +
Preference number: 6 (lower is better)
Translates to: SWPWVAPTRPLW*MSASLCRSDET
Trigger: GGTCTCATCTGATCGACAAAGGGATGCTGACATCCACCACAGAGGACGAGTAGGGGCCACCCAGGGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CAA 72 bp GCAGGTGACAAAGTGATGGTGGACCCTCCAATTATCTaGTCCTCGGGTGGCGCAACCGGCTCATGGGCCACC +
Preference number: 6 (lower is better)
Translates to: AGDKVMVDPPII*SSGGATGSWAT
Trigger: GGTGGCCCATGAGCCGGTTGCGCCACCCGAGGACAAGATAATTGGAGGGTCCACCATCACTTTGTCACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 72 bp AGGGGAAGCCGTGAGCCTGGTGTAAGGCAACAGGGATaGGTGGGAACCGATGATCCTCAGCTCCAGCCAACC +
Preference number: 6 (lower is better)
Translates to: RGSREPGVRQQG*VGTDDPQLQPT
Trigger: GGTTGGCTGGAGCTGAGGATCATCGGTTCCCACCAATCCCTGTTGCCTTACACCAGGCTCACGGCTTCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 90 bp GGCTGCATTAGGGGAAGCCGTGAGCCTGGTGTAAGGCAACAGGGATaGGTGGGAACCGATGATCCTCAGCTCCAGCCAACCATTGAGCAG +
Preference number: 6 (lower is better)
Translates to: GCIRGSREPGVRQQG*VGTDDPQLQPTIEQ
Trigger: CTGCTCAATGGTTGGCTGGAGCTGAGGATCATCGGTTCCCACCAATCCCTGTTGCCTTACACCAGGCTCACGGCTTCCCCTAATGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 90 bp CGGACCGTTTTCCAGCCAATGACTGACTGGATCACCCCAGGAATGTaGTACTCCTGCAGGCGAAACAGGTCCGAGGGCTCACAGTCCACA +
Preference number: 6 (lower is better)
Translates to: RTVFQPMTDWITPGM*YSCRRNRSEGSQST
Trigger: TGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGAAAACGGTCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CAA 90 bp GTGGCACATACCCAGCCAATGACTGACTGGATCACCCCAGGAATGTaGTACTCCTGCAGGCGAAACAGGTCCGAGGGCTCACAGTCCACA +
Preference number: 6 (lower is better)
Translates to: VAHTQPMTDWITPGM*YSCRRNRSEGSQST
Trigger: TGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGGTATGTGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS TCA 72 bp GCAGGCGAAACAGGTCCGAGGGCTCACAGTCCACAGTaGAGCTGTTGGTGTCATTGTTGTACTCCACAGGGC +
Preference number: 6 (lower is better)
Translates to: AGETGPRAHSPQ*SCWCHCCTPQG
Trigger: GCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS TCA 72 bp CCGCTCACCCCCTGTGAGTGGCACATACCCAGCCAATaGCTGACTGGATCACCCCAGGAATGTTGTACTCCT +
Preference number: 6 (lower is better)
Translates to: PLTPCEWHIPSQ*LTGSPQECCTP
Trigger: AGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGGTATGTGCCACTCACAGGGGGTGAGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS TCA 72 bp GGGGGAAAGCTGTCCTGCCCATACCCTGACCTGGCGTaGGCAATTCTCCTTCATCCTGGGGCTTACAGCTTT +
Preference number: 6 (lower is better)
Translates to: GGKLSCPYPDLA*AILLHPGAYSF
Trigger: AAAGCTGTAAGCCCCAGGATGAAGGAGAATTGCTCACGCCAGGTCAGGGTATGGGCAGGACAGCTTTCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 72 bp GGCTCTCACTGTCCGATGCAGTCTCTCCATCTACCTTaGCTTCTGACTCTGACTCCTTGTCCTCGGGTGGCG +
Preference number: 6 (lower is better)
Translates to: GSHCPMQSLHLP*LLTLTPCPRVA
Trigger: CGCCACCCGAGGACAAGGAGTCAGAGTCAGAAGCAAAGGTAGATGGAGAGACTGCATCGGACAGTGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000460006.6
ENST00000486875.1
CDS CAA 72 bp ACCCAGCCAATGACTGACTGGATCACCCCAGGAATGTaGTACTCCTGCAGGCGAAACAGGTCCGAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: TQPMTDWITPGM*YSCRRNRSEGS
Trigger: TGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 90 bp ACCCACCAGTTCTTCCATCTTGAAGACAAGTTGGAAAGGGCCCTATaGAGGACCTCCGGGGTATCATCTGCAGAGACTGGCAGGGGTGCG +
Preference number: 6 (lower is better)
Translates to: THQFFHLEDKLERAL*RTSGVSSAETGRGA
Trigger: CGCACCCCTGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAACTTGTCTTCAAGATGGAAGAACTGGTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS GCA 72 bp ATGACTGACTGGATCACCCCAGGAATGTTGTACTCCTaGAGGCGAAACAGGTCCGAGGGCTCACAGTCCACA +
Preference number: 6 (lower is better)
Translates to: MTDWITPGMLYS*RRNRSEGSQST
Trigger: TGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS CCA 72 bp GGGTACATCCGGACCGTTTTCCAGCCAATGACTGACTaGATCACCCCAGGAATGTTGTACTCCTGCAGGCGA +
Preference number: 6 (lower is better)
Translates to: GYIRTVFQPMTD*ITPGMLYSCRR
Trigger: TCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGAAAACGGTCCGGATGTACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CCA 72 bp ATGTTGGGGGAAAGCTGTCCTGCCCATACCCTGACCTaGCGTGAGCAATTCTCCTTCATCCTGGGGCTTACA +
Preference number: 6 (lower is better)
Translates to: MLGESCPAHTLT*REQFSFILGLT
Trigger: TGTAAGCCCCAGGATGAAGGAGAATTGCTCACGCCAGGTCAGGGTATGGGCAGGACAGCTTTCCCCCAACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 72 bp TTCCAGCCAATGACTGACTGGATCACCCCAGGAATGTaGTACTCCTGCAGGCGAAACAGGTCCGAGGGCTCA +
Preference number: 6 (lower is better)
Translates to: FQPMTDWITPGM*YSCRRNRSEGS
Trigger: TGAGCCCTCGGACCTGTTTCGCCTGCAGGAGTACAACATTCCTGGGGTGATCCAGTCAGTCATTGGCTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS TCA 72 bp CCTCAGCTCCAGCCAACCATTGAGCAGGTGACAAAGTaGTGGTGGACCCTCCAATTATCTTGTCCTCGGGTG +
Preference number: 6 (lower is better)
Translates to: PQLQPTIEQVTK*WWTLQLSCPRV
Trigger: CACCCGAGGACAAGATAATTGGAGGGTCCACCATCACTTTGTCACCTGCTCAATGGTTGGCTGGAGCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 90 bp AGGTCCGAGGGCTCACAGTCCACAGTGAAGCTGTTGGTGTCATTGTaGTACTCCACAGGGCAGACAAAGCATCTGTACCCGGACATCACA +
Preference number: 6 (lower is better)
Translates to: RSEGSQSTVKLLVSL*YSTGQTKHLYPDIT
Trigger: TGTGATGTCCGGGTACAGATGCTTTGTCTGCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCCCTCGGACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS CAA 90 bp AACAGGTCCGAGGGCTCACAGTCCACAGTGAAGCTGTTGGTGTCATaGTTGTACTCCACAGGGCAGACAAAGCATCTGTACCCGGACATC +
Preference number: 6 (lower is better)
Translates to: NRSEGSQSTVKLLVS*LYSTGQTKHLYPDI
Trigger: GATGTCCGGGTACAGATGCTTTGTCTGCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCCCTCGGACCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS CAA 90 bp TGCAGGCGAAACAGGTCCGAGGGCTCACAGTCCACAGTGAAGCTGTaGGTGTCATTGTTGTACTCCACAGGGCAGACAAAGCATCTGTAC +
Preference number: 6 (lower is better)
Translates to: CRRNRSEGSQSTVKL*VSLLYSTGQTKHLY
Trigger: GTACAGATGCTTTGTCTGCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCCCTCGGACCTGTTTCGCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS TCA 72 bp GCATCCCTTTGTCGATCAGATGAGACCGCAGCGTGTTaGAGATGTGGAGCTGCTGATCTGGCCGTAAAGTCA +
Preference number: 6 (lower is better)
Translates to: ASLCRSDETAAC*RCGAADLAVKS
Trigger: TGACTTTACGGCCAGATCAGCAGCTCCACATCTTCAACACGCTGCGGTCTCATCTGATCGACAAAGGGATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CAA 72 bp GGCTCACAGTCCACAGTGAAGCTGTTGGTGTCATTGTaGTACTCCACAGGGCAGACAAAGCATCTGTACCCG +
Preference number: 6 (lower is better)
Translates to: GSQSTVKLLVSL*YSTGQTKHLYP
Trigger: CGGGTACAGATGCTTTGTCTGCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS TCA 72 bp TCTTCCATCTTGAAGACAAGTTGGAAAGGGCCCTATTaGGGACCTCCGGGGTATCATCTGCAGAGACTGGCA +
Preference number: 6 (lower is better)
Translates to: SSILKTSWKGPY*GPPGYHLQRLA
Trigger: TGCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAACTTGTCTTCAAGATGGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS TCA 72 bp CCGATGATCCTCAGCTCCAGCCAACCATTGAGCAGGTaGCAAAGTGATGGTGGACCCTCCAATTATCTTGTC +
Preference number: 6 (lower is better)
Translates to: PMILSSSQPLSR*QSDGGPSNYLV
Trigger: GACAAGATAATTGGAGGGTCCACCATCACTTTGTCACCTGCTCAATGGTTGGCTGGAGCTGAGGATCATCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS TCA 72 bp GTGGGAAGTCACAGATGTTCTATGGCAGAGGTTTTCTaGGAAGCCTGGACCCCCGTCAATTCCCACAACCAA +
Preference number: 6 (lower is better)
Translates to: VGSHRCSMAEVF*EAWTPVNSHNQ
Trigger: TTGGTTGTGGGAATTGACGGGGGTCCAGGCTTCTCAGAAAACCTCTGCCATAGAACATCTGTGACTTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000486875.1
CDS GCA 72 bp ATGTCCGTTGCGTCCAGTCATCAAAAAGTTACAGGCTaGATTAGGGGAAGCCGTGAGCCTGGTGTAAGGCAA +
Preference number: 6 (lower is better)
Translates to: MSVASSHQKVTG*IRGSREPGVRQ
Trigger: TTGCCTTACACCAGGCTCACGGCTTCCCCTAATGCAGCCTGTAACTTTTTGATGACTGGACGCAACGGACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 72 bp GAGGGCTCACAGTCCACAGTGAAGCTGTTGGTGTCATaGTTGTACTCCACAGGGCAGACAAAGCATCTGTAC +
Preference number: 6 (lower is better)
Translates to: EGSQSTVKLLVS*LYSTGQTKHLY
Trigger: GTACAGATGCTTTGTCTGCCCTGTGGAGTACAACAATGACACCAACAGCTTCACTGTGGACTGTGAGCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379070.3
ENST00000460006.6
ENST00000468817.5
CDS CAA 72 bp TTCTTCCATCTTGAAGACAAGTTGGAAAGGGCCCTATaGAGGACCTCCGGGGTATCATCTGCAGAGACTGGC +
Preference number: 6 (lower is better)
Translates to: FFHLEDKLERAL*RTSGVSSAETG
Trigger: GCCAGTCTCTGCAGATGATACCCCGGAGGTCCTCAATAGGGCCCTTTCCAACTTGTCTTCAAGATGGAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000460006.6
ENST00000468817.5
ENST00000486875.1
CDS CCA 72 bp GCGATGTATACATTGACAAAGGTGGCCATCAGATACTaGCAGTCAAAGCGATCCATGATGCCTCCATGGCCA +
Preference number: 6 (lower is better)
Translates to: AMYTLTKVAIRY*QSKRSMMPPWP
Trigger: TGGCCATGGAGGCATCATGGATCGCTTTGACTGCCAGTATCTGATGGCCACCTTTGTCAATGTATACATCGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CCA 72 bp CCTACACCAATGACCCTCCAGGTGGCTACTGAGAAGTaGGAAGTCACAGATGTTCTATGGCAGAGGTTTTCT +
Preference number: 6 (lower is better)
Translates to: PTPMTLQVATEK*EVTDVLWQRFS
Trigger: AGAAAACCTCTGCCATAGAACATCTGTGACTTCCCACTTCTCAGTAGCCACCTGGAGGGTCATTGGTGTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000486875.1
CDS CAA 72 bp GGCTCTCACTGTCCGATGCAGTCTCTCCATCTACCTTaGCTTCTGACTCTGACTCCAACTAGTAGTACAAGG +
Preference number: 6 (lower is better)
Translates to: GSHCPMQSLHLP*LLTLTPTSSTR
Trigger: CCTTGTACTACTAGTTGGAGTCAGAGTCAGAAGCAAAGGTAGATGGAGAGACTGCATCGGACAGTGAGAGCC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468817.5
CDS CAA 90 bp AGTTTGCTTGGGTTAGGGCCTCTGATAAAACTGGCGATGTATACATaGACAAAGGTGGCCATCAGATACTGGCAGTCAAAGCGATCCATG +
Preference number: 6 (lower is better)
Translates to: SLLGLGPLIKLAMYT*TKVAIRYWQSKRSM
Trigger: CATGGATCGCTTTGACTGCCAGTATCTGATGGCCACCTTTGTCAATGTATACATCGCCAGTTTTATCAGAGGCCCTAACCCAAGCAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CAA 72 bp GGGTTAGGGCCTCTGATAAAACTGGCGATGTATACATaGACAAAGGTGGCCATCAGATACTGGCAGTCAAAG +
Preference number: 6 (lower is better)
Translates to: GLGPLIKLAMYT*TKVAIRYWQSK
Trigger: CTTTGACTGCCAGTATCTGATGGCCACCTTTGTCAATGTATACATCGCCAGTTTTATCAGAGGCCCTAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379070.3
ENST00000460006.6
CDS CCA 72 bp CCCAATTCTCACCAGATCATTCCTTCAAATAGGTTGTaGATAACAAGATGTGACTGTGTTACAACAATCAGC +
Preference number: 6 (lower is better)
Translates to: PNSHQIIPSNRL*ITRCDCVTTIS
Trigger: GCTGATTGTTGTAACACAGTCACATCTTGTTATCCACAACCTATTTGAAGGAATGATCTGGTGAGAATTGGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467923.5
CDS CAA 90 bp GAAAATCCAACTCCCAATTCTCACCAGATCATTCCTTCAAATAGGTaGTGGATAACAAGATGTGACTGTGTTACAACAATCAGCAATGTC +
Preference number: 6 (lower is better)
Translates to: ENPTPNSHQIIPSNR*WITRCDCVTTISNV
Trigger: GACATTGCTGATTGTTGTAACACAGTCACATCTTGTTATCCACAACCTATTTGAAGGAATGATCTGGTGAGAATTGGGAGTTGGATTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467923.5