Pregenerated sensors for CDS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000163624Ensembl transcript IDs: ENST00000295887.6, ENST00000511298.1
Found 172 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGGCTGCACTAGAAGCCAGGAGTGAGGCATTGGGGACACGGGGGTaGGTTGCTCCCACTCGGGCAAGCATCTCCTGCTCTGCTGCAGCC | + |
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Preference number: 1 (lower is better) Translates to: RAALEARSEALGTRG*VAPTRASISCSAAA Trigger: GGCTGCAGCAGAGCAGGAGATGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTCCCCAATGCCTCACTCCTGGCTTCTAGTGCAGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 90 bp | ACGGGGGTGGGTTGCTCCCACTCGGGCAAGCATCTCCTGCTCTGCTaGAGCCACAACCCCGACTCACTACCCTACAGAACCATGGAAGCC | + |
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Preference number: 1 (lower is better) Translates to: TGVGCSHSGKHLLLC*SHNPDSLPYRTMEA Trigger: GGCTTCCATGGTTCTGTAGGGTAGTGAGTCGGGGTTGTGGCTGCAGCAGAGCAGGAGATGCTTGCCCGAGTGGGAGCAACCCACCCCCGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 90 bp | GACACGGGGGTGGGTTGCTCCCACTCGGGCAAGCATCTCCTGCTCTaGTGCAGCCACAACCCCGACTCACTACCCTACAGAACCATGGAA | + |
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Preference number: 1 (lower is better) Translates to: DTGVGCSHSGKHLLL*CSHNPDSLPYRTME Trigger: TTCCATGGTTCTGTAGGGTAGTGAGTCGGGGTTGTGGCTGCAGCAGAGCAGGAGATGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR TCA 90 bp | TTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGAAGCCAGGAGTaGGGCATTGGGGACACGGGGGTGGGTTGCTCCCACTCGGGCAAG | + |
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Preference number: 1 (lower is better) Translates to: FLRGESTKGCTRSQE*GIGDTGVGCSHSGK Trigger: CTTGCCCGAGTGGGAGCAACCCACCCCCGTGTCCCCAATGCCTCACTCCTGGCTTCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 90 bp | CAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTaGGAGGTGAGTCTACAAAGGGCTGCACTAGAAGCCAGGAGTGAG | + |
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Preference number: 1 (lower is better) Translates to: QKAGLGSGLQADLPS*EVSLQRAALEARSE Trigger: CTCACTCCTGGCTTCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 90 bp | GATGCAAAGGAGCAAGGGGACAAAGATGACCTATGGTCAAAAAGCTaGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGT | + |
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Preference number: 1 (lower is better) Translates to: DAKEQGDKDDLWSKS*TGIRSPGRSSFLRG Trigger: ACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGTCCCCTTGCTCCTTTGCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 90 bp | CGTTTGAAGCTGCCTCCTGAGCTACTGTCCTCTGTTGAGATAATATaGGGAGGATCCGTACACTGTGTTCTTCACAGCAGAATTCTTCCT | + |
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Preference number: 1 (lower is better) Translates to: RLKLPPELLSSVEII*GGSVHCVLHSRILP Trigger: AGGAAGAATTCTGCTGTGAAGAACACAGTGTACGGATCCTCCGCATATTATCTCAACAGAGGACAGTAGCTCAGGAGGCAGCTTCAAACG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 90 bp | AGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTaGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGTGTG | + |
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Preference number: 1 (lower is better) Translates to: SSSLHTSTDKKFTLI*LVSSPPKERFGIRV Trigger: CACACGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 90 bp | GATGATGAATCAATGGAGTATATGCTGGACCATAAAATGGACTCTTaGTACCGAGTGCACCTATGTCTAATCATGTGTGCATGTGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: DDESMEYMLDHKMDS*YRVHLCLIMCACEE Trigger: CTCCTCACATGCACACATGATTAGACATAGGTGCACTCGGTACCAAGAGTCCATTTTATGGTCCAGCATATACTCCATTGATTCATCATC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 90 bp | GTCTGCCACCACATTGCTACATTGGAATTTAAGCCCTCTTCACAGTaGAAATATCAAAATGAGCCAAGTCAGGGTTTTATGGCAATCTTT | + |
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Preference number: 1 (lower is better) Translates to: VCHHIATLEFKPSSQ*KYQNEPSQGFMAIF Trigger: AAAGATTGCCATAAAACCCTGACTTGGCTCATTTTGATATTTGCACTGTGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGTGGCAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 90 bp | CAACTAGGCATTACTGTGAAAGAACTTCCTAGTTTTTCATTTGTCTaGCACCACATTGCTACATTGGAATTTAAGCCCTCTTCACAGTGC | + |
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Preference number: 1 (lower is better) Translates to: QLGITVKELPSFSFV*HHIATLEFKPSSQC Trigger: GCACTGTGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGTGGCAGACAAATGAAAAACTAGGAAGTTCTTTCACAGTAATGCCTAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 90 bp | AAGAACTTCCTAGTTTTTCATTTGTCTGCCACCACATTGCTACATTaGAATTTAAGCCCTCTTCACAGTGCAAATATCAAAATGAGCCAA | + |
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Preference number: 1 (lower is better) Translates to: KNFLVFHLSATTLLH*NLSPLHSANIKMSQ Trigger: TTGGCTCATTTTGATATTTGCACTGTGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGTGGCAGACAAATGAAAAACTAGGAAGTTCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CAA 90 bp | GAGGTGAGTCTACAAAGGGCTGCACTAGAAGCCAGGAGTGAGGCATaGGGGACACGGGGGTGGGTTGCTCCCACTCGGGCAAGCATCTCC | + |
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Preference number: 2 (lower is better) Translates to: EVSLQRAALEARSEA*GTRGWVAPTRASIS Trigger: GGAGATGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTCCCCAATGCCTCACTCCTGGCTTCTAGTGCAGCCCTTTGTAGACTCACCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR GCA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCAGACACGGGGGTGGGTTaGTCCCACTCGGGCAAGCAT | + |
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Preference number: 2 (lower is better) Translates to: CASHRSESQAGSTSRAPPDTGVG*SHSGKH Trigger: ATGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTC...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR GCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTAAGCATCTCCTGCTCTaGTGCAGCCACAACCCCGAC | + |
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Preference number: 2 (lower is better) Translates to: KAGLGSGLQADLPSCEVSKHLLL*CSHNPD Trigger: GTCGGGGTTGTGGCTGCAGCAGAGCAGGAGATGCTT...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATATTGGGGACACGGGGGTaGGTTGCTCCCACTCGGGCA | + |
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Preference number: 2 (lower is better) Translates to: KYGCGEHTAAVAYIRPRILGTRG*VAPTRA Trigger: TGCCCGAGTGGGAGCAACCCACCCCCGTGTCCCCAA...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGACACATGACGAAGAGATaGCCCAGGCCACAGGTCACC | + |
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Preference number: 2 (lower is better) Translates to: SPGRSSFLRGESTKGCTRHMTKR*PRPQVT Trigger: GGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTG...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CAA 90 bp | AGTGAAGCACATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTaGAAGCTGCCTCCTGAGCTACTGTCCTCTGTTGAGATAATATGC | + |
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Preference number: 2 (lower is better) Translates to: SEAHDEEMAQATGHR*KLPPELLSSVEIIC Trigger: GCATATTATCTCAACAGAGGACAGTAGCTCAGGAGGCAGCTTCAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTGCTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCCACAGGTCACCGTTTaGAGCTGCCTCCTGAGCTAC | + |
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Preference number: 2 (lower is better) Translates to: TKMTYGQKAGLGSGLQADPQVTV*SCLLSY Trigger: GTAGCTCAGGAGGCAGCTTCAAACGGTGACCTGTGG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGAGCTACTGTCCTCTGTTaGGATAATATGCGGAGGATC | + |
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Preference number: 2 (lower is better) Translates to: SPGRSSFLRGESTKGCTRATVLC*DNMRRI Trigger: GATCCTCCGCATATTATCTCAACAGAGGACAGTAGC...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAAGTGAAGCACATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTTGTCTGTTGAGATAATATaGGGAGGATCCGTACACTGT | + |
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Preference number: 2 (lower is better) Translates to: GKSEAHDEEMAQATGHRLSVEII*GGSVHC Trigger: ACAGTGTACGGATCCTCCGCATATTATCTCAACAGA...CAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTGCTTCACTTTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTACCAGGAGTGAGGCATTaGGGACACGGGGGTGGGTTG | + |
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Preference number: 2 (lower is better) Translates to: QAGSTSRAPPNIANLEQLPGVRH*GHGGGL Trigger: CAACCCACCCCCGTGTCCCCAATGCCTCACTCCTGG...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTACGGGCAAGCATCTCCTaGTCTGCTGCAGCCACAACC | + |
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Preference number: 2 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLRASIS*SAAATT Trigger: GGTTGTGGCTGCAGCAGAGCAGGAGATGCTTGCCCG...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATTACCCTACAGAACCATaGAAGCCAGTTCACAGGGAA | + |
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Preference number: 2 (lower is better) Translates to: TKMTYGQKAGLGSGLQADYPTEP*KPVHRE Trigger: TTCCCTGTGAACTGGCTTCCATGGTTCTGTAGGGTA...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCATTTATGACCAACATTTaGGGCTGTAATGGGACAAAT | + |
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Preference number: 2 (lower is better) Translates to: CASHRSESQAGSTSRAPPFMTNI*GCNGTN Trigger: ATTTGTCCCATTACAGCCTCAAATGTTGGTCATAAA...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CAA 90 bp | ATGCGGAGGATCCGTACACTGTGTTCTTCACAGCAGAATTCTTCCTaGTTGCTCTTGAAAAGTTTTTGCGAGGTCGTGACCTTCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: MRRIRTLCSSQQNSS*LLLKSFCEVVTFQT Trigger: TGTTTGGAAGGTCACGACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAGAATTCTGCTGTGAAGAACACAGTGTACGGATCCTCCGCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGACAGTCTTTTAAATTATaGAACCTAGCAAGTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SPGRSSFLRGESTKGCTRQSFKL*NLASKG Trigger: CCCCTTACTTGCTAGGTTTCATAATTTAAAAGACTG...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATAGTTTTTGCGAGGTCGTaGCCTTCCAAACAATTTTAT | + |
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Preference number: 2 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIVFARS*PSKQFY Trigger: ATAAAATTGTTTGGAAGGTCACGACCTCGCAAAAAC...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATAAAATTTACTCTCATCTaGTTAGTGTCCAGTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIKFTLI*LVSSPP Trigger: TGGTGGACTGGACACTAACCAGATGAGAGTAAATTT...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTGTCAGTGTTTTTCTaGATAATTCCTTCTTGTCAG | + |
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Preference number: 2 (lower is better) Translates to: TKMTYGQKAGLGSGLQADLSVFF*IIPSCQ Trigger: CTGACAAGAAGGAATTATTCAGAAAAACACTGACAG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTACTATGGTCAAAAAGCTaGACTGGGATCAGGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLLWSKS*TGIRSP Trigger: TGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAG...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTATCAGGCTCCCTCCCCTaGATTTTGAAACTACCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLSGSLP*ILKLPK Trigger: TTTAGGTAGTTTCAAAATTCAGGGGAGGGAGCCTGA...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGTTATCAGAAGTAGTCTaGTGCCTGCTCTTTCTAACA | + |
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Preference number: 2 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSLSEVV*CLLFLT Trigger: TGTTAGAAAGAGCAGGCATCAGACTACTTCTGATAA...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTACTTCCTTGTTGCTCTTaGAAAGTTTTTGCGAGGTCG | + |
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Preference number: 2 (lower is better) Translates to: QAGSTSRAPPNIANLEQLLPCCS*KVFARS Trigger: CGACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAG...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAGTCAAAAAGCTGGACTaGGATCAGGTCTCCAGGCAG | + |
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Preference number: 2 (lower is better) Translates to: CLSFSKRFRELIDTHHKLVKKLD*DQVSRQ Trigger: CTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGAC...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTAGACAAAGATGACCTATaGTCAAAAAGCTGGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: QAGSTSRAPPNIANLEQLDKDDL*SKSWTG Trigger: CCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGTC...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTACATGTGAGGAGGTGCTaGCTGACTGCATCAGTGGAA | + |
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Preference number: 2 (lower is better) Translates to: CLSFSKRFRELIDTHHKLHVRRC*LTASVE Trigger: TTCCACTGATGCAGTCAGCCAGCACCTCCTCACATG...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAGTGAGATACACTGGCTaGACACATGCAGTGATGATG | + |
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Preference number: 2 (lower is better) Translates to: CLSFSKRFRELIDTHHKLVRYTG*THAVMM Trigger: CATCATCACTGCATGTGTTCAGCCAGTGTATCTCAC...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTACAGAATGTTTTCCCCTaGCAAATGGTTACTTCTTTG | + |
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Preference number: 2 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLQNVFP*QMVTSL Trigger: CAAAGAAGTAACCATTTGCCAGGGGAAAACATTCTG...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CAA 90 bp | AGTCAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTaGGAACAACTAGGCATTACTGTGAAAGAACTTCCTAGTTTTTCA | + |
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Preference number: 2 (lower is better) Translates to: SQAGSTSRAPPNIAN*EQLGITVKELPSFS Trigger: TGAAAAACTAGGAAGTTCTTTCACAGTAATGCCTAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTGACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CAA 90 bp | AAAGAACTTCCTAGTTTTTCATTTGTCTGCCACCACATTGCTACATaGGAATTTAAGCCCTCTTCACAGTGCAAATATCAAAATGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: KELPSFSFVCHHIAT*EFKPSSQCKYQNEP Trigger: TGGCTCATTTTGATATTTGCACTGTGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGTGGCAGACAAATGAAAAACTAGGAAGTTCTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 72 bp | CGGGGGTGGGTTGCTCCCACTCGGGCAAGCATCTCCTaGTCTGCTGCAGCCACAACCCCGACTCACTACCCT | + |
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Preference number: 3 (lower is better) Translates to: RGWVAPTRASIS*SAAATTPTHYP Trigger: AGGGTAGTGAGTCGGGGTTGTGGCTGCAGCAGAGCAGGAGATGCTTGCCCGAGTGGGAGCAACCCACCCCCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 72 bp | CTAGAAGCCAGGAGTGAGGCATTGGGGACACGGGGGTaGGTTGCTCCCACTCGGGCAAGCATCTCCTGCTCT | + |
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Preference number: 3 (lower is better) Translates to: LEARSEALGTRG*VAPTRASISCS Trigger: AGAGCAGGAGATGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTCCCCAATGCCTCACTCCTGGCTTCTAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CAA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCAGCCACAGGTCACCGTTaGAAGCTGCCTCCTGAGCTA | + |
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Preference number: 3 (lower is better) Translates to: CASHRSESQAGSTSRAPPATGHR*KLPPEL Trigger: TAGCTCAGGAGGCAGCTTCAAACGGTGACCTGTGGC...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR GCA 72 bp | GGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTaGGAGGTGAGTCTACAAAGGGCTGCACTAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: GLGSGLQADLPS*EVSLQRAALEA Trigger: GGCTTCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR-3UTR CAA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGGGACACGGGGGTGGGTaGCTCCCACTCGGGCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSGHGGG*LPLGQA Trigger: TGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTCC...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 72 bp | GAGCAAGGGGACAAAGATGACCTATGGTCAAAAAGCTaGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: EQGDKDDLWSKS*TGIRSPGRSSF Trigger: GAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGTCCCCTTGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| 3UTR CCA 72 bp | CATGATGCAAAGGAGCAAGGGGACAAAGATGACCTATaGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HDAKEQGDKDDL*SKSWTGIRSPG Trigger: GCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGTCCCCTTGCTCCTTTGCATCATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCATCTTCCTTGTTGCTCTaGAAAAGTTTTTGCGAGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CASHRSESQAGSTSRAPPSSLLL*KSFCEV Trigger: GACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAGA...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATAGCTCTTGAAAAGTTTTaGCGAGGTCGTGACCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIALEKF*RGRDLP Trigger: TGGAAGGTCACGACCTCGCAAAAACTTTTCAAGAGC...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGGGCAGATCTTCCTTCTaGCGAGGTGAGTCTACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSGRSSF*RGESTK Trigger: CTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCC...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR TCA 72 bp | TACTCCAGACTACATGAGGAGGAAGTGCAGGAGAACTaGCTTCCTATTGTGCCTTGCATAAAACATTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: YSRLHEEEVQEN*LPIVPCIKHFA Trigger: AGCAAAATGTTTTATGCAAGGCACAATAGGAAGTCAGTTCTCCTGCACTTCCTCCTCATGTAGTCTGGAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CCA 72 bp | TTACATACGTCCACGGATAAGAAATTTACTCTCATCTaGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LHTSTDKKFTLI*LVSSPPKERFG Trigger: GCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAAAGGTACAAGACATTTaGCTGGCAATTTGCTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQKVQDI*LAICYL Trigger: TAAGTAGCAAATTGCCAGCAAAATGTCTTGTACCTT...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTATGCAAAAGTAAATATTaGTGCAAAAAGGCACACTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLCKSKY*CKKAHC Trigger: GCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCA...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTACAGAATTCTTCCTTGTaGCTCTTGAAAAGTTTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLQNSSL*LLKSFC Trigger: GCAAAAACTTTTCAAGAGCAACAAGGAAGAATTCTG...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTACAGCAGAATTCTTCCTaGTTGCTCTTGAAAAGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLQQNSS*LLLKSF Trigger: AAAACTTTTCAAGAGCAACAAGGAAGAATTCTGCTG...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR GCA 72 bp | CACATTGCTACATTGGAATTTAAGCCCTCTTCACAGTaGAAATATCAAAATGAGCCAAGTCAGGGTTTTATG | + |
|
Preference number: 3 (lower is better) Translates to: HIATLEFKPSSQ*KYQNEPSQGFM Trigger: CATAAAACCCTGACTTGGCTCATTTTGATATTTGCACTGTGAAGAGGGCTTAAATTCCAATGTAGCAATGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR GCA 72 bp | ATTACTGTGAAAGAACTTCCTAGTTTTTCATTTGTCTaGCACCACATTGCTACATTGGAATTTAAGCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ITVKELPSFSFV*HHIATLEFKPS Trigger: AGAGGGCTTAAATTCCAATGTAGCAATGTGGTGGCAGACAAATGAAAAACTAGGAAGTTCTTTCACAGTAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTGTGCTCTCGGTTTCGTaGTCGCCGCCGGCCGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSVLSVS*SPPAAS Trigger: AGAGGCGGCCGGCGGCGACCACGAAACCGAGAGCAC...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCATTGGGGACACGGGGGTaGGTTGCTCCCACTCGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CASHRSESQAGSTSRAPPLGTRG*VAPTRA Trigger: TGCCCGAGTGGGAGCAACCCACCCCCGTGTCCCCAA...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTGCAAGCAGGGTTCTaGAGGCGGGGCGCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADLQAGF*RRGAPP Trigger: TGGCGGGGCGCCCCGCCTGCAGAACCCTGCTTGCAG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | GGGAAAAGTGAAGCACATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTTGCCACAGGTCACCGTTTaGAGCTGCCTCCTGAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: GKSEAHDEEMAQATGHRLPQVTV*SCLLSY Trigger: GTAGCTCAGGAGGCAGCTTCAAACGGTGACCTGTGG...CAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTGCTTCACTTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATACTCTCCCTCGCGGTGTaGCGGCGACACCGCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRILSLAV*RRHRFP Trigger: AGGGAAGCGGTGTCGCCGCCACACCGCGAGGGAGAG...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | CATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTaGAAGCTGCCTCCTGAGCTACTGTCCTCTGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HDEEMAQATGHR*KLPPELLSSVE Trigger: CTCAACAGAGGACAGTAGCTCAGGAGGCAGCTTCAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | TGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTaGCGAGGTGAGTCTACAAAGGGCTGCACTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: WTGIRSPGRSSF*RGESTKGCTRS Trigger: GCTTCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTACTTCCGCTCCCGCGCTaGCGTGGCGGCCTCCTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLLPLPR*RGGLLK Trigger: CTTGAGGAGGCCGCCACGGCAGCGCGGGAGCGGAAG...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATAAAGCATCTCCTGCTCTaGTGCAGCCACAACCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIKHLLL*CSHNPD Trigger: GTCGGGGTTGTGGCTGCAGCAGAGCAGGAGATGCTT...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAAGCTCCCGCGCTGCCGTaGCGGCCTCCTCAAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: SAKVNICAKRHTARCNLKAPALP*RPPQAP Trigger: GGGTGCTTGAGGAGGCCGCCACGGCAGCGCGGGAGC...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | GGGAAAAGTGAAGCACATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTTGCTTCCTTGTTGCTCTTaGAAAGTTTTTGCGAGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GKSEAHDEEMAQATGHRLLPCCS*KVFARS Trigger: CGACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAG...CAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTGCTTCACTTTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | GGGAAAAGTGAAGCACATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTTGTGGAAGCATTTCACTTaGATGCCCAGAACAAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GKSEAHDEEMAQATGHRLWKHFT*MPRTRS Trigger: GCTTCTTGTTCTGGGCATCCAAGTGAAATGCTTCCA...CAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTGCTTCACTTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTATGGTCAAAAAGCTaGACTGGGATCAGGTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSLWSKS*TGIRSP Trigger: TGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAG...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTCAGGGGTTCTATCTaGGGATGGTGGAATTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADLRGSI*GWWNFR Trigger: CCGGAAATTCCACCATCCTCAGATAGAACCCCTGAG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATTTCCTTCTTGCGAGGTaGGTCTACAAAGGGCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADFLLAR*VYKGLH Trigger: GTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAA...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGAGTGAGATACACTGGCTaGACACATGCAGTGATGATG | + |
|
Preference number: 4 (lower is better) Translates to: SPGRSSFLRGESTKGCTRVRYTG*THAVMM Trigger: CATCATCACTGCATGTGTTCAGCCAGTGTATCTCAC...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGAAGGTTGACAGTGCAATaGTGTGGATCTGGAAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SPGRSSFLRGESTKGCTRRLTVQ*CGSGKG Trigger: ACCCTTTCCAGATCCACAGCATTGCACTGTCAACCT...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTACTTCGGTATTCCACTaGGCAGACAAAGTACTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSTSVFH*ADKVLV Trigger: TACCAGTACTTTGTCTGCCCAGTGGAATACCGAAGT...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCAGTCCTTCCCTCTCTaGATCCAGTTATACCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSQSFPL*IQLYLQ Trigger: TTGAAGGTATAACTGGATCCAGAGAGGGAAGGACTG...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTGACAAAGATGACCTATaGTCAAAAAGCTGGACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSDKDDL*SKSWTG Trigger: CCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGTC...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCATGTGAGGAGGTGCTaGCTGACTGCATCAGTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADHVRRC*LTASVE Trigger: TTCCACTGATGCAGTCAGCCAGCACCTCCTCACATG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCAGTTATCAGTAAAGTaGCATGAGTCCATGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSQLSVK*HESMRT Trigger: TGTTCGCATGGACTCATGTCACTTTACTGATAACTG...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTTCTGTTGAGATAATATaGGGAGGATCCGTACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSSVEII*GGSVHC Trigger: ACAGTGTACGGATCCTCCGCATATTATCTCAACAGA...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAAAGCACCCCGAAACCTaGGCTGCAAGCAGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLKHPET*AASRVL Trigger: CAGAACCCTGCTTGCAGCTCAGGTTTCGGGGTGCTT...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTATCTATGGTAGCGAATaGGGAACTGAAGTTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAGLGSGLQADLPSCEVSIYGSE*GTEVVL Trigger: AAGAACAACTTCAGTTCCTCATTCGCTACCATAGAT...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATAACTGCTGTTCAGGTTaGAGCACCAACAACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADNCCSG*STNNCC Trigger: ACAGCAGTTGTTGGTGCTTCAACCTGAACAGCAGTT...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGTTTCTTTGTCGCTGGTaGTCTCGGTTTCGTGGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSFLCRW*SRFRGR Trigger: GCGACCACGAAACCGAGAGCACCAGCGACAAAGAAA...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCAACCACATTGCTACATTaGAATTTAAGCCCTCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CASHRSESQAGSTSRAPPTTLLH*NLSPLH Trigger: GTGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGT...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGACAGATAGAGGGCAAATaGTATAAATCTATGGTAGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGRSSFLRGESTKGCTRQIEGK*YKSMVA Trigger: CGCTACCATAGATTTATATCATTTGCCCTCTATCTG...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAGAGGTGCTGGCTGACTaGATCAGTGGAACCCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLEVLAD*ISGTQV Trigger: TACCTGGGTTCCACTGATGCAGTCAGCCAGCACCTC...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAGTCAAAAAGCTGGACTaGGATCAGGTCTCCAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQVKKLD*DQVSRQ Trigger: CTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGAC...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGAAAATTTACTCTCATCTaGTTAGTGTCCAGTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGRSSFLRGESTKGCTRKFTLI*LVSSPP Trigger: TGGTGGACTGGACACTAACCAGATGAGAGTAAATTT...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGACTGTCAGTGTTTTTCTaGATAATTCCTTCTTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGRSSFLRGESTKGCTRLSVFF*IIPSCQ Trigger: CTGACAAGAAGGAATTATTCAGAAAAACACTGACAG...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAGAAGTGCAGGAGAACTaGCTTCCTATTGTGCCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQEVQEN*LPIVPC Trigger: GCAAGGCACAATAGGAAGTCAGTTCTCCTGCACTTC...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATATTTGTATGGATAGTGTaGGATACACTGGCTGAACAC | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIFVWIV*DTLAEH Trigger: GTGTTCAGCCAGTGTATCTCACACTATCCATACAAA...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTACGGGCAAGCATCTCCTaGTCTGCTGCAGCCACAACC | + |
|
Preference number: 4 (lower is better) Translates to: CLSFSKRFRELIDTHHKLRASIS*SAAATT Trigger: GGTTGTGGCTGCAGCAGAGCAGGAGATGCTTGCCCG...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAACTGTTTCTTTGTCGCTaGTGCTCTCGGTTTCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQLFLCR*CSRFRG Trigger: ACCACGAAACCGAGAGCACCAGCGACAAAGAAACAG...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATACATAAAATGGACTCTTaGTACCGAGTGCACCTATGT | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIHKMDS*YRVHLC Trigger: ACATAGGTGCACTCGGTACCAAGAGTCCATTTTATG...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATAAGGATCCCATATAGATaGTCAGGAAAAACAACGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIRIPYR*SGKTTR Trigger: TCTCGTTGTTTTTCCTGATCATCTATATGGGATCCT...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATTTATCAGAAGTAGTCTaGTGCCTGCTCTTTCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADLSEVV*CLLFLT Trigger: TGTTAGAAAGAGCAGGCATCAGACTACTTCTGATAA...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAGCTACTGTCCTCTGTTaGGATAATATGCGGAGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQATVLC*DNMRRI Trigger: GATCCTCCGCATATTATCTCAACAGAGGACAGTAGC...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTAACTGCTGTAGCACTTTaGTGGGATTTGGGCCCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLTAVAL*WDLGPL Trigger: TAAGGGGCCCAAATCCCAGCAAAGTGCTACAGCAGT...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATAAGCCCTCTTCACAGTaGAAATATCAAAATGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADKPSSQ*KYQNEP Trigger: TGGCTCATTTTGATATTTGCACTGTGAAGAGGGCTT...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | CGTACACTGTGTTCTTCACAGCAGAATTCTTCCTTGTaGCTCTTGAAAAGTTTTTGCGAGGTCGTGACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTLCSSQQNSSL*LLKSFCEVVTF Trigger: GAAGGTCACGACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAGAATTCTGCTGTGAAGAACACAGTGTACG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAACACATAGGCAGCAATaGATCCAAACACAACTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQTHRQQ*IQTQLW Trigger: CCACAGTTGTGTTTGGATTCATTGCTGCCTATGTGT...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTAAAGCTGGAAAAGTTCTaGGGGCTCACATTCTGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLKLEKF*GLTFCH Trigger: GTGACAGAATGTGAGCCCTCAGAACTTTTCCAGCTT...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATAGTTGCCATCAAATACTaGCAATCAAATCTGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIVAIKY*QSNLSI Trigger: AATGGACAGATTTGATTGTCAGTATTTGATGGCAAC...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATAAAGATTCAGAGAACTaGTTGACACACATCATAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADKDSEN*LTHIIS Trigger: GCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTT...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCAAGGAACCATATCATaGCTTCAAACAGATTTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TKMTYGQKAGLGSGLQADQGTIS*LQTDFG Trigger: TCCAAAATCTGTTTGAAGGCATGATATGGTTCCTTG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAAGGCACACTGCCAGGTaGAATCTTAAAACATCGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQRHTAR*NLKTSS Trigger: TGACGATGTTTTAAGATTGCACCTGGCAGTGTGCCT...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATACAAAGTACTGGTATTTaGATAACACATAGGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: KYGCGEHTAAVAYIRPRIQSTGI*ITHRQQ Trigger: TTGCTGCCTATGTGTTATCCAAATACCAGTACTTTG...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAGACAGTGCAATGCTGTaGATCTGGAAAGGGTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLDSAML*IWKGYK Trigger: CTTGTACCCTTTCCAGATCCACAGCATTGCACTGTC...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTATACCCTACAGAACCATaGAAGCCAGTTCACAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLYPTEP*KPVHRE Trigger: TTCCCTGTGAACTGGCTTCCATGGTTCTGTAGGGTA...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTATGCTGGACCATAAAATaGACTCTTGGTACCGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLCWTIK*TLGTEC Trigger: GCACTCGGTACCAAGAGTCCATTTTATGGTCCAGCA...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | CTGTGTTCTTCACAGCAGAATTCTTCCTTGTTGCTCTaGAAAAGTTTTTGCGAGGTCGTGACCTTCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: LCSSQQNSSLLL*KSFCEVVTFQT Trigger: TGTTTGGAAGGTCACGACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAGAATTCTGCTGTGAAGAACACAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAGGATTCCTTTCTCAATaGGATGAGTCTTCAGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQGFLSQ*DESSGF Trigger: AAACCCTGAAGACTCATCTCATTGAGAAAGGAATCC...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTATCAGGCTCCCTCCCCTaGATTTTGAAACTACCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLSGSLP*ILKLPK Trigger: TTTAGGTAGTTTCAAAATTCAGGGGAGGGAGCCTGA...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGCAGTCTTTTAAATTATaGAACCTAGCAAGTAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSQSFKL*NLASKG Trigger: CCCCTTACTTGCTAGGTTTCATAATTTAAAAGACTG...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAAGCAAGGGGACAAAGATaGCCTATGGTCAAAAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAKVNICAKRHTARCNLKARGQR*PMVKKL Trigger: CAGCTTTTTGACCATAGGTCATCTTTGTCCCCTTGC...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAAGCATTTCACTTGGATaGCCAGAACAAGAAGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLSISLG*PEQEAS Trigger: TGATGCTTCTTGTTCTGGGCATCCAAGTGAAATGCT...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAAACTCAGTACAAACATaGAGAAACCTGCCAGATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQNSVQT*RNLPDR Trigger: TCTATCTGGCAGGTTTCTGCATGTTTGTACTGAGTT...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAATGACAAGGTGTGACTaGGTGACAGTTATCAGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLMTRCD*VTVISK Trigger: TTTACTGATAACTGTCACTCAGTCACACCTTGTCAT...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAATTGGATGACAAGGTGTaGCTGAGTGACAGTTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAKVNICAKRHTARCNLKLDDKV*LSDSYQ Trigger: CTGATAACTGTCACTCAGTCACACCTTGTCATCCAA...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR TCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAAAAAGAAACCACCAATaGATCCTTCCCAAGTCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQKRNHQ*ILPKSF Trigger: AAAAGACTTGGGAAGGATTCATTGGTGGTTTCTTTT...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTATCAAATTTTATGACATaGTGCAAAGGAGCAAGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLSNFMT*CKGARG Trigger: TCCCCTTGCTCCTTTGCATCATGTCATAAAATTTGA...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATTTATGACCAACATTTaGGGCTGTAATGGGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQFMTNI*GCNGTN Trigger: ATTTGTCCCATTACAGCCTCAAATGTTGGTCATAAA...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR TCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAACAAGGAAAAAGCGCTaGGGAAGAATGTGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CLSFSKRFRELIDTHHKLTRKKR*GRMCIP Trigger: TGGGATGCACATTCTTCCTCAGCGCTTTTTCCTTGT...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAGCAATGCTGTGGATCTaGAAAGGGTACAAGCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: CLSFSKRFRELIDTHHKLAMLWI*KGYKLT Trigger: AGTGAGCTTGTACCCTTTCCAGATCCACAGCATTGC...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAGTTATACCTTCAAGGTaGGTTGTAGGATTCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLVIPSR*VVGFLS Trigger: AGAAAGGAATCCTACAACCCACCTTGAAGGTATAAC...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTACTAACAAACCAATCATaGCAAAAATTTCAGGCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLLTNQS*QKFQAP Trigger: GGGAGCCTGAAATTTTTGCCATGATTGGTTTGTTAG...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | AAGAACTTCCTAGTTTTTCATTTGTCTGCCACCACATaGCTACATTGGAATTTAAGCCCTCTTCACAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNFLVFHLSATT*LHWNLSPLHSA Trigger: TGCACTGTGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGTGGCAGACAAATGAAAAACTAGGAAGTTCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | GGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTaGGAACAACTAGGCATTACTGTGAAAGAACTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSTSRAPPNIAN*EQLGITVKELP Trigger: AGGAAGTTCTTTCACAGTAATGCCTAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAATTGCAGATAACACTTaGTATTGGAACAAGGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLIADNT*YWNKEP Trigger: TGGTTCCTTGTTCCAATATCAAGTGTTATCTGCAAT...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAACACTTTGCTGGGATTTaGGCCCCTTATAAAACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAKVNICAKRHTARCNLKHFAGI*APYKTC Trigger: ACAAGTTTTATAAGGGGCCCAAATCCCAGCAAAGTG...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR CCA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTACAATGGAGTATATGCTaGACCATAAAATGGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAGSTSRAPPNIANLEQLQWSIC*TIKWTL Trigger: AAGAGTCCATTTTATGGTCCAGCATATACTCCATTG...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR TCA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAAGTTTTTGCGAGGTCGTaGCCTTCCAAACAATTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: SAKVNICAKRHTARCNLKVFARS*PSKQFY Trigger: ATAAAATTGTTTGGAAGGTCACGACCTCGCAAAAAC...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS-3UTR GCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTACTCTTGAAAAGTTTTTaGGAGGTCGTGACCTTCCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLSFSKRFRELIDTHHKLLLKSF*EVVTFQ Trigger: TTGGAAGGTCACGACCTCGCAAAAACTTTTCAAGAG...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| 3UTR CAA 72 bp | ATGGTAGCGAATGAGGAACTGAAGTTGTTCTTCTCTTaGAACAAATGTAGCAAAATAATCAGCTACAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MVANEELKLFFS*NKCSKIISYSL Trigger: GAGACTGTAGCTGATTATTTTGCTACATTTGTTCAAAGAGAAGAACAACTTCAGTTCCTCATTCGCTACCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000511298.1 |
||
| CDS-3UTR GCA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAAGTTTTTCATTTGTCTaGCACCACATTGCTACATTG | + |
|
Preference number: 4 (lower is better) Translates to: CLSFSKRFRELIDTHHKLSFSFV*HHIATL Trigger: CAATGTAGCAATGTGGTGGCAGACAAATGAAAAACT...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
||
| CDS CCA 90 bp | CGCCGGCCGCCTCTCCCTCGCGGTGTGGCGGCGACACCGCTTCCCTaGGGCCGGGGCAGCTTCCCCGGTGCCTCAGCTCCAACATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RRPPLPRGVAATPLP*GRGSFPGASAPTSS Trigger: GGAAGATGTTGGAGCTGAGGCACCGGGGAAGCTGCCCCGGCCCCAGGGAAGCGGTGTCGCCGCCACACCGCGAGGGAGAGGCGGCCGGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295887.6 ENST00000511298.1 |
||
| CDS CCA 90 bp | TTCCCCGGTGCCTCAGCTCCAACATCTTCCGCTCCCGCGCTGCCGTaGCGGCCTCCTCAAGCACCCCGAAACCTGAGCTGCAAGCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: FPGASAPTSSAPALP*RPPQAPRNLSCKQG Trigger: ACCCTGCTTGCAGCTCAGGTTTCGGGGTGCTTGAGGAGGCCGCCACGGCAGCGCGGGAGCGGAAGATGTTGGAGCTGAGGCACCGGGGAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295887.6 ENST00000511298.1 |
||
| CDS CCA 90 bp | GTATCCACCAGTTTTTCCACTTTGTCGCTGGTGCTCTCGGTTTCGTaGTCGCCGCCGGCCGCCTCTCCCTCGCGGTGTGGCGGCGACACC | + |
|
Preference number: 5 (lower is better) Translates to: VSTSFSTLSLVLSVS*SPPAASPSRCGGDT Trigger: GGTGTCGCCGCCACACCGCGAGGGAGAGGCGGCCGGCGGCGACCACGAAACCGAGAGCACCAGCGACAAAGTGGAAAAACTGGTGGATAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511298.1 |
||
| CDS CCA 90 bp | CTGTCATCAATATCTGTTTCTTTGTCGCTGGTGCTCTCGGTTTCGTaGTCGCCGCCGGCCGCCTCTCCCTCGCGGTGTGGCGGCGACACC | + |
|
Preference number: 5 (lower is better) Translates to: LSSISVSLSLVLSVS*SPPAASPSRCGGDT Trigger: GGTGTCGCCGCCACACCGCGAGGGAGAGGCGGCCGGCGGCGACCACGAAACCGAGAGCACCAGCGACAAAGAAACAGATATTGATGACAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | GGGAAAAGTGAAGCACATGACGAAGAGATGGCCCAGGCCACAGGTCACCGTTTGAACTGCTGTAGCACTTaGCTGGGATTTGGGCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: GKSEAHDEEMAQATGHRLNCCST*LGFGPL Trigger: AAGGGGCCCAAATCCCAGCAAAGTGCTACAGCAGTT...CAAACGGTGACCTGTGGCCTGGGCCATCTCTTCGTCATGTGCTTCACTTTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTGGCAGATCTTCCTTCTaGCGAGGTGAGTCTACAAAG | + |
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Preference number: 5 (lower is better) Translates to: KAGLGSGLQADLPSCEVSGRSSF*RGESTK Trigger: CTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCC...ACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGACCTGATCCCAGTCCAGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAAGGACACGGGGGTGGGTaGCTCCCACTCGGGCAAGCA | + |
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Preference number: 5 (lower is better) Translates to: SAKVNICAKRHTARCNLKGHGGG*LPLGQA Trigger: TGCTTGCCCGAGTGGGAGCAACCCACCCCCGTGTCC...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAGCCACAGGTCACCGTTaGAAGCTGCCTCCTGAGCTA | + |
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Preference number: 5 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLATGHR*KLPPEL Trigger: TAGCTCAGGAGGCAGCTTCAAACGGTGACCTGTGGC...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | TGTGCATCCCACAGGTCAGAGAGTCAAGCAGGAAGTACCAGTAGAGCACCTCCATTCCTAGTTTTTCATTaGTCTGCCACCACATTGCTA | + |
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Preference number: 5 (lower is better) Translates to: CASHRSESQAGSTSRAPPFLVFH*SATTLL Trigger: TAGCAATGTGGTGGCAGACAAATGAAAAACTAGGAA...TGGAGGTGCTCTACTGGTACTTCCTGCTTGACTCTCTGACCTGTGGGATGCACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AAATATGGCTGTGGAGAGCACACAGCAGCAGTAGCTTACATACGTCCACGGATATCAATATCTGTTTCTTaGTCGCTGGTGCTCTCGGTT | + |
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Preference number: 5 (lower is better) Translates to: KYGCGEHTAAVAYIRPRISISVS*SLVLSV Trigger: AACCGAGAGCACCAGCGACAAAGAAACAGATATTGA...TATCCGTGGACGTATGTAAGCTACTGCTGCTGTGTGCTCTCCACAGCCATATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | ACAAAGATGACCTATGGTCAAAAAGCTGGACTGGGATCAGGTCTCCAGGCAGATCCAGATAGAGCTTTTTaGAGAATCTCAGGGGTTCTA | + |
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Preference number: 5 (lower is better) Translates to: TKMTYGQKAGLGSGLQADPDRAF*RISGVL Trigger: TAGAACCCCTGAGATTCTCAAAAAAGCTCTATCTGG...ATCTGCCTGGAGACCTGATCCCAGTCCAGCTTTTTGACCATAGGTCATCTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | TCTCCAGGCAGATCTTCCTTCTTGCGAGGTGAGTCTACAAAGGGCTGCACTAGACAGCAGAATTCTTCCTaGTTGCTCTTGAAAAGTTTT | + |
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Preference number: 5 (lower is better) Translates to: SPGRSSFLRGESTKGCTRQQNSS*LLLKSF Trigger: AAAACTTTTCAAGAGCAACAAGGAAGAATTCTGCTG...TCTAGTGCAGCCCTTTGTAGACTCACCTCGCAAGAAGGAAGATCTGCCTGGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAGCTCTTGAAAAGTTTTaGCGAGGTCGTGACCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQALEKF*RGRDLP Trigger: TGGAAGGTCACGACCTCGCAAAAACTTTTCAAGAGC...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAACACCACATTGCTACATaGGAATTTAAGCCCTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQHHIAT*EFKPSS Trigger: TGAAGAGGGCTTAAATTCCAATGTAGCAATGTGGTG...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGCTCCAAGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAAACCAGTTTTTCCACCTaGAAGATAAACCAGATAGAG | + |
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Preference number: 5 (lower is better) Translates to: SSKCKSKYLCKKAHCQVQTSFST*KINQIE Trigger: CTCTATCTGGTTTATCTTCAAGGTGGAAAAACTGGT...TTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACTTGGAGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGGCAAAATCCTTGATTTaGAAGGCTCTTTTGAATCCA | + |
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Preference number: 5 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSAKSLI*KALLNP Trigger: TGGATTCAAAAGAGCCTTCAAAATCAAGGATTTTGC...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | ATTTACTCTCATCTGGTTAGTGTCCAGTCCACCAAAGGAAAGGTTTGGCATTCGCAGAATTCTTCCTTGTaGCTCTTGAAAAGTTTTTGC | + |
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Preference number: 5 (lower is better) Translates to: IYSHLVSVQSTKGKVWHSQNSSL*LLKSFC Trigger: GCAAAAACTTTTCAAGAGCAACAAGGAAGAATTCTG...CGAATGCCAAACCTTTCCTTTGGTGGACTGGACACTAACCAGATGAGAGTAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | CAAGCAGGAAGTACCAGTAGAGCACCTCCAAATATAGCAAATTTGGAACAACTATTGTCTGCCACCACATaGCTACATTGGAATTTAAGC | + |
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Preference number: 5 (lower is better) Translates to: QAGSTSRAPPNIANLEQLLSATT*LHWNLS Trigger: GCTTAAATTCCAATGTAGCAATGTGGTGGCAGACAA...TAGTTGTTCCAAATTTGCTATATTTGGAGGTGCTCTACTGGTACTTCCTGCTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAATGGAAGCATTTCACTaGGATGCCCAGAACAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: CLSFSKRFRELIDTHHKLMEAFH*DAQNKK Trigger: CTTCTTGTTCTGGGCATCCAAGTGAAATGCTTCCAT...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGCAGCAGTAGCTTACATACGTCCACGGATAAGAAATTTACTCTCATCTGGTTAATTTTGAAGGCTCTTTaGAATCCACTAGCAAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: SSSSLHTSTDKKFTLIWLILKAL*NPLAKK Trigger: CTTCTTTGCTAGTGGATTCAAAAGAGCCTTCAAAAT...TAACCAGATGAGAGTAAATTTCTTATCCGTGGACGTATGTAAGCTACTGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | AGTGCAAAAGTAAATATTTGTGCAAAAAGGCACACTGCCAGGTGCAATCTTAAATCTTCCTTGTTGCTCTaGAAAAGTTTTTGCGAGGTC | + |
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Preference number: 5 (lower is better) Translates to: SAKVNICAKRHTARCNLKSSLLL*KSFCEV Trigger: GACCTCGCAAAAACTTTTCAAGAGCAACAAGGAAGA...TTTAAGATTGCACCTGGCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS TCA 90 bp | GATCCAGTTATACCTTCAAGGTGGGTTGTAGGATTCCTTTCTCAATaGGATGAGTCTTCAGGGTTTTATATATATTTAACTGCTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: DPVIPSRWVVGFLSQ*DESSGFYIYLTAVQ Trigger: CTGAACAGCAGTTAAATATATATAAAACCCTGAAGACTCATCTCATTGAGAAAGGAATCCTACAACCCACCTTGAAGGTATAACTGGATC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTAAAGGTACAAGACATTTaGCTGGCAATTTGCTACTTA | + |
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Preference number: 5 (lower is better) Translates to: CLSFSKRFRELIDTHHKLKVQDI*LAICYL Trigger: TAAGTAGCAAATTGCCAGCAAAATGTCTTGTACCTT...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS-3UTR CAA 90 bp | TGTCTCAGTTTCAGTAAAAGATTCAGAGAACTGATTGACACACATCATAAGCTATGCAAAAGTAAATATTaGTGCAAAAAGGCACACTGC | + |
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Preference number: 5 (lower is better) Translates to: CLSFSKRFRELIDTHHKLCKSKY*CKKAHC Trigger: GCAGTGTGCCTTTTTGCACAAATATTTACTTTTGCA...TAGCTTATGATGTGTGTCAATCAGTTCTCTGAATCTTTTACTGAAACTGAGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS CCA 72 bp | TTCGTGGTCGCCGCCGGCCGCCTCTCCCTCGCGGTGTaGCGGCGACACCGCTTCCCTGGGGCCGGGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: FVVAAGRLSLAV*RRHRFPGAGAA Trigger: AGCTGCCCCGGCCCCAGGGAAGCGGTGTCGCCGCCACACCGCGAGGGAGAGGCGGCCGGCGGCGACCACGAA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295887.6 ENST00000511298.1 |
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| CDS CCA 72 bp | CCTCTCCCTCGCGGTGTGGCGGCGACACCGCTTCCCTaGGGCCGGGGCAGCTTCCCCGGTGCCTCAGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: PLPRGVAATPLP*GRGSFPGASAP Trigger: TGGAGCTGAGGCACCGGGGAAGCTGCCCCGGCCCCAGGGAAGCGGTGTCGCCGCCACACCGCGAGGGAGAGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295887.6 ENST00000511298.1 |
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| CDS TCA 72 bp | CGCTGCCGTGGCGGCCTCCTCAAGCACCCCGAAACCTaGGCTGCAAGCAGGGTTCTGCAGGCGGGGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RCRGGLLKHPET*AASRVLQAGRP Trigger: GGGGCGCCCCGCCTGCAGAACCCTGCTTGCAGCTCAGGTTTCGGGGTGCTTGAGGAGGCCGCCACGGCAGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000295887.6 ENST00000511298.1 |
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| CDS CCA 72 bp | AGTTTTTCCACTTTGTCGCTGGTGCTCTCGGTTTCGTaGTCGCCGCCGGCCGCCTCTCCCTCGCGGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: SFSTLSLVLSVS*SPPAASPSRCG Trigger: GCCACACCGCGAGGGAGAGGCGGCCGGCGGCGACCACGAAACCGAGAGCACCAGCGACAAAGTGGAAAAACT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000511298.1 |
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| CDS CCA 72 bp | ATATCTGTTTCTTTGTCGCTGGTGCTCTCGGTTTCGTaGTCGCCGCCGGCCGCCTCTCCCTCGCGGTGTGGC | + |
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Preference number: 6 (lower is better) Translates to: ISVSLSLVLSVS*SPPAASPSRCG Trigger: GCCACACCGCGAGGGAGAGGCGGCCGGCGGCGACCACGAAACCGAGAGCACCAGCGACAAAGAAACAGATAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS CCA 72 bp | CCAATTAAAGATGCAAAGGTTGACAGTGCAATGCTGTaGATCTGGAAAGGGTACAAGCTCACTCTTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: PIKDAKVDSAML*IWKGYKLTLSC Trigger: ACAGGAAAGAGTGAGCTTGTACCCTTTCCAGATCCACAGCATTGCACTGTCAACCTTTGCATCTTTAATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS TCA 72 bp | TTCAGGGTTTTATATATATTTAACTGCTGTTCAGGTTaGAGCACCAACAACTGCTGTAGCACTTTGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: FRVLYIFNCCSG*STNNCCSTLLG Trigger: TCCCAGCAAAGTGCTACAGCAGTTGTTGGTGCTTCAACCTGAACAGCAGTTAAATATATATAAAACCCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS CAA 90 bp | ACAATTTATAAAACATCTGTCAGTGTTTTTCTGAATAATTCCTTCTaGTCAGTCCTTCCCTCTCTGGATCCAGTTATACCTTCAAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: TIYKTSVSVFLNNSF*SVLPSLDPVIPSRW Trigger: CCACCTTGAAGGTATAACTGGATCCAGAGAGGGAAGGACTGACAAGAAGGAATTATTCAGAAAAACACTGACAGATGTTTTATAAATTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS TCA 72 bp | AAAAAGGTAAGCAGTTATGTCATTGCAGATAACACTTaGTATTGGAACAAGGAACCATATCATGCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: KKVSSYVIADNT*YWNKEPYHAFK Trigger: TTTGAAGGCATGATATGGTTCCTTGTTCCAATATCAAGTGTTATCTGCAATGACATAACTGCTTACCTTTTT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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| CDS TCA 72 bp | ATACCTTCAAGGTGGGTTGTAGGATTCCTTTCTCAATaGGATGAGTCTTCAGGGTTTTATATATATTTAACT | + |
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Preference number: 6 (lower is better) Translates to: IPSRWVVGFLSQ*DESSGFYIYLT Trigger: AGTTAAATATATATAAAACCCTGAAGACTCATCTCATTGAGAAAGGAATCCTACAACCCACCTTGAAGGTAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000295887.6 |
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