Pregenerated sensors for CDRT7 (Homo sapiens)
Ensembl gene IDs: ENSG00000259944Ensembl transcript IDs: ENST00000568256.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | ACTACCAATGCGATGTCCCTGGACCCAGCGTGCGGTAGAGGGGCCTaGAGTGGACTCTCTGAAGCCCCTGGGAGCTGGCTCCAGCAGTCG | + |
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Preference number: 5 (lower is better) Translates to: TTNAMSLDPACGRGA*SGLSEAPGSWLQQS Trigger: CGACTGCTGGAGCCAGCTCCCAGGGGCTTCAGAGAGTCCACTGCAGGCCCCTCTACCGCACGCTGGGTCCAGGGACATCGCATTGGTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS CCA 90 bp | TCTCTCCCTGTCATGGCTGATTTCAAACTACCAATGCGATGTCCCTaGACCCAGCGTGCGGTAGAGGGGCCTGCAGTGGACTCTCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SLPVMADFKLPMRCP*TQRAVEGPAVDSLK Trigger: CTTCAGAGAGTCCACTGCAGGCCCCTCTACCGCACGCTGGGTCCAGGGACATCGCATTGGTAGTTTGAAATCAGCCATGACAGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS TCA 90 bp | GGATTCAGAAGTCCACACCCTCAGCGCTCTGACTCCAGACCTCTTTaGTCCTTTCAGAGCATCTCTTCTCTGTGTGTCAACTCTGTCCTC | + |
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Preference number: 5 (lower is better) Translates to: GFRSPHPQRSDSRPL*SFQSISSLCVNSVL Trigger: GAGGACAGAGTTGACACACAGAGAAGAGATGCTCTGAAAGGATCAAAGAGGTCTGGAGTCAGAGCGCTGAGGGTGTGGACTTCTGAATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS CCA 90 bp | CATTCTTCCACATGTAAGGTAGGGATGGAGAAAGTGGATAACAGTTaGCCAATTGTGAAATGTCTGGTACCAGAGCACGAAGCATGGGGG | + |
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Preference number: 5 (lower is better) Translates to: HSSTCKVGMEKVDNS*PIVKCLVPEHEAWG Trigger: CCCCCATGCTTCGTGCTCTGGTACCAGACATTTCACAATTGGCCAACTGTTATCCACTTTCTCCATCCCTACCTTACATGTGGAAGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS CCA 72 bp | GGGGCCTGCAGTGGACTCTCTGAAGCCCCTGGGAGCTaGCTCCAGCAGTCGGCTAGGTCTGTCCCTGAACCA | + |
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Preference number: 6 (lower is better) Translates to: GACSGLSEAPGS*LQQSARSVPEP Trigger: TGGTTCAGGGACAGACCTAGCCGACTGCTGGAGCCAGCTCCCAGGGGCTTCAGAGAGTCCACTGCAGGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS CCA 72 bp | GTCATGGCTGATTTCAAACTACCAATGCGATGTCCCTaGACCCAGCGTGCGGTAGAGGGGCCTGCAGTGGAC | + |
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Preference number: 6 (lower is better) Translates to: VMADFKLPMRCP*TQRAVEGPAVD Trigger: GTCCACTGCAGGCCCCTCTACCGCACGCTGGGTCCAGGGACATCGCATTGGTAGTTTGAAATCAGCCATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS TCA 72 bp | AGTCCACACCCTCAGCGCTCTGACTCCAGACCTCTTTaGTCCTTTCAGAGCATCTCTTCTCTGTGTGTCAAC | + |
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Preference number: 6 (lower is better) Translates to: SPHPQRSDSRPL*SFQSISSLCVN Trigger: GTTGACACACAGAGAAGAGATGCTCTGAAAGGATCAAAGAGGTCTGGAGTCAGAGCGCTGAGGGTGTGGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS TCA 72 bp | AATGTCTGGTACCAGAGCACGAAGCATGGGGGACAATaGAGAGGAGCGAAGTTAAGGAGTAAGGAGAGATTG | + |
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Preference number: 6 (lower is better) Translates to: NVWYQSTKHGGQ*RGAKLRSKERL Trigger: CAATCTCTCCTTACTCCTTAACTTCGCTCCTCTTCATTGTCCCCCATGCTTCGTGCTCTGGTACCAGACATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS TCA 72 bp | GATGAATGTCTAGCAATGCTCTCTCCCTGTCATGGCTaGTTTCAAACTACCAATGCGATGTCCCTGGACCCA | + |
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Preference number: 6 (lower is better) Translates to: DECLAMLSPCHG*FQTTNAMSLDP Trigger: TGGGTCCAGGGACATCGCATTGGTAGTTTGAAATCAGCCATGACAGGGAGAGAGCATTGCTAGACATTCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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| CDS TCA 72 bp | AAGAATAGACTCTTCTTCCATGGTTTCTCCAAACCCTaGTTAAATATCTCCTCACGTCTCATGGACCTAAAT | + |
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Preference number: 6 (lower is better) Translates to: KNRLFFHGFSKP*LNISSRLMDLN Trigger: ATTTAGGTCCATGAGACGTGAGGAGATATTTAATCAGGGTTTGGAGAAACCATGGAAGAAGAGTCTATTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000568256.1 |
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